npm - @nfdi4plants/arctrl - Versions diffs - 3.0.0-beta.13 → 3.0.0-beta.14 - Mend

@nfdi4plants/arctrl 3.0.0-beta.13 → 3.0.0-beta.14

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.

Files changed (60) hide show

package/dist/ts/index.d.ts CHANGED Viewed

@@ -17,7 +17,8 @@ import { LDGraphExtensions_PyJsInterop as LDGraphIO, LDNodeExtensions_PyJsIntero
 import { Conversion as Conversion } from './ts/Conversion.js';
 export { ARC } from './ts/ARC.js';
 export { ArcAssay, ArcStudy, ArcRun, ArcWorkflow, ArcInvestigation } from './ts/Core/ArcTypes.js';
-export { DataMap } from './ts/Core/DataMap.js';
+export { Datamap } from './ts/Core/Datamap.js';
+export { DataContext } from './ts/Core/DataContext.js';
 export { CompositeCell } from './ts/Core/Table/CompositeCell.js';
 export { CompositeHeader, IOType } from './ts/Core/Table/CompositeHeader.js';
 export { CompositeColumn } from './ts/Core/Table/CompositeColumn.js';

package/dist/ts/index.d.ts.map CHANGED Viewed

	@@ -1 +1 @@
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1	+ {"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../../src/ARCtrl/index.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,GAAG,EAAE,MAAM,aAAa,CAAA;AACjC,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,MAAM,EAAE,WAAW,EAAE,gBAAgB,EAAE,MAAM,uBAAuB,CAAA;AACjG,OAAO,EAAE,OAAO,EAAE,MAAM,sBAAsB,CAAA;AAC9C,OAAO,EAAE,WAAW,EAAE,MAAM,0BAA0B,CAAA;AACtD,OAAO,EAAE,aAAa,EAAE,MAAM,kCAAkC,CAAA;AAChE,OAAO,EAAE,eAAe,EAAE,MAAM,EAAE,MAAM,oCAAoC,CAAA;AAC5E,OAAO,EAAE,eAAe,EAAE,MAAM,oCAAoC,CAAA;AACpE,OAAO,EAAE,QAAQ,EAAE,MAAM,6BAA6B,CAAA;AACtD,OAAO,EAAE,QAAQ,EAAE,YAAY,EAAE,MAAM,uBAAuB,CAAA;AAC9D,OAAO,EAAE,SAAS,EAAE,MAAM,wBAAwB,CAAA;AAClD,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAA;AAC7C,OAAO,EAAE,cAAc,EAAE,MAAM,cAAc,CAAA;AAC7C,OAAO,EAAE,MAAM,EAAE,MAAM,qBAAqB,CAAA;AAC5C,OAAO,EAAE,WAAW,EAAE,MAAM,0BAA0B,CAAA;AACtD,OAAO,EAAE,kBAAkB,EAAE,MAAM,iCAAiC,CAAA;AACpE,OAAO,EAAE,QAAQ,IAAI,OAAO,EAAE,MAAM,sBAAsB,CAAA;AAC1D,OAAO,EAAE,QAAQ,EAAE,MAAM,2BAA2B,CAAA;AACpD,OAAO,EAAE,aAAa,EAAC,MAAM,sBAAsB,CAAA;AACnD,OAAO,EAAE,UAAU,EAAE,MAAM,+BAA+B,CAAA;AAC1D,OAAO,EAAE,cAAc,EAAE,MAAM,mCAAmC,CAAA;AAGlE,OAAO,EAAE,MAAM,EAAE,OAAO,EAAE,KAAK,EAAE,OAAO,EAAC,MAAM,0BAA0B,CAAA;AACzE,OAAO,EAAE,SAAS,EAAE,MAAM,2BAA2B,CAAA;AACrD,OAAO,EAAE,QAAQ,EAAE,QAAQ,EAAE,qBAAqB,EAAE,MAAM,gCAAgC,CAAA;AAC1F,OAAO,EAAE,SAAS,EAAE,MAAM,iCAAiC,CAAA;AAC3D,OAAO,EAAE,aAAa,EAAE,MAAM,qCAAqC,CAAA;AACnE,OAAO,EAAE,MAAM,EAAE,MAAM,8BAA8B,CAAA;AACrD,OAAO,EAAE,YAAY,EAAE,MAAM,oCAAoC,CAAA;AACjE,OAAO,EAAE,aAAa,EAAE,MAAM,qCAAqC,CAAA;AACnE,OAAO,EAAE,cAAc,EAAE,MAAM,sCAAsC,CAAA;AACrE,OAAO,EAAE,QAAQ,EAAE,MAAM,gCAAgC,CAAA;AACzD,OAAO,EAAE,eAAe,EAAE,MAAM,uCAAuC,CAAA;AACvE,OAAO,EAAE,eAAe,EAAE,MAAM,uCAAuC,CAAA;AACvE,OAAO,EAAE,QAAQ,EAAE,MAAM,gCAAgC,CAAA;AACzD,OAAO,EAAE,kBAAkB,EAAE,MAAM,0CAA0C,CAAA;AAC7E,OAAO,EAAE,SAAS,EAAE,MAAM,iCAAiC,CAAA;AAC3D,OAAO,EAAE,6BAA6B,IAAI,SAAS,EAAE,MAAM,yBAAyB,CAAA;AACpF,OAAO,EAAE,4BAA4B,IAAI,QAAQ,EAAE,MAAM,yBAAyB,CAAA;AAClF,OAAO,EAAE,UAAU,IAAI,UAAU,EAAE,MAAM,oBAAoB,CAAA;AAE7D,eAAO,MAAM,OAAO;;;;;;;;;;;;;;;;;;;;;;;;CAwBnB,CAAC"}

package/dist/ts/index.js CHANGED Viewed

@@ -1,6 +1,7 @@
 export { ARC } from './ts/ARC.js';
 export { ArcAssay, ArcInvestigation, ArcRun, ArcStudy, ArcWorkflow } from './ts/Core/ArcTypes.js';
-export { DataMap } from './ts/Core/DataMap.js';
+export { Datamap } from './ts/Core/Datamap.js';
+export { DataContext } from './ts/Core/DataContext.js';
 export { CompositeCell } from './ts/Core/Table/CompositeCell.js';
 export { CompositeHeader, IOType } from './ts/Core/Table/CompositeHeader.js';
 export { CompositeColumn } from './ts/Core/Table/CompositeColumn.js';

package/dist/ts/ts/ARC.d.ts CHANGED Viewed

@@ -5,7 +5,7 @@ import { ArcWorkflow, ArcRun, ArcStudy, ArcAssay, ArcInvestigation } from './Cor
 import { FSharpResult$2_$union } from '@fable-org/fable-library-js/Result.js';
 import { Contract } from './Contract/Contract.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';
-import { DataMap } from './Core/DataMap.js';
+import { Datamap } from './Core/Datamap.js';
 import { FileSystemTree_$union } from './FileSystem/FileSystemTree.js';
 import { FSharpList } from '@fable-org/fable-library-js/List.js';
 import { CWLProcessingUnit_$union } from './CWL/CWLProcessingUnit.js';
@@ -89,10 +89,10 @@ export declare function ARCAux_getArcAssaysFromContracts(contracts: Contract[]):
 export declare function ARCAux_getArcStudiesFromContracts(contracts: Contract[]): [ArcStudy, FSharpList<ArcAssay>][];
 export declare function ARCAux_getArcWorkflowsFromContracts(contracts: Contract[]): ArcWorkflow[];
 export declare function ARCAux_getArcRunsFromContracts(contracts: Contract[]): ArcRun[];
-export declare function ARCAux_getAssayDataMapFromContracts(assayIdentifier: string, contracts: Contract[]): Option<DataMap>;
-export declare function ARCAux_getStudyDataMapFromContracts(studyIdentifier: string, contracts: Contract[]): Option<DataMap>;
-export declare function ARCAux_getWorkflowDataMapFromContracts(workflowIdentifier: string, contracts: Contract[]): Option<DataMap>;
-export declare function ARCAux_getRunDataMapFromContracts(runIdentifier: string, contracts: Contract[]): Option<DataMap>;
+export declare function ARCAux_getAssayDatamapFromContracts(assayIdentifier: string, contracts: Contract[]): Option<Datamap>;
+export declare function ARCAux_getStudyDatamapFromContracts(studyIdentifier: string, contracts: Contract[]): Option<Datamap>;
+export declare function ARCAux_getWorkflowDatamapFromContracts(workflowIdentifier: string, contracts: Contract[]): Option<Datamap>;
+export declare function ARCAux_getRunDatamapFromContracts(runIdentifier: string, contracts: Contract[]): Option<Datamap>;
 export declare function ARCAux_getWorkflowCWLFromContracts(workflowIdentifier: string, contracts: Contract[]): Option<CWLProcessingUnit_$union>;
 export declare function ARCAux_getRunCWLFromContracts(runIdentifier: string, contracts: Contract[]): Option<CWLProcessingUnit_$union>;
 export declare function ARCAux_getRunYMLFromContracts(runIdentifier: string, contracts: Contract[]): Option<CWLParameterReference[]>;

package/dist/ts/ts/ARC.js CHANGED Viewed

@@ -27,13 +27,13 @@ import { ArcTables } from './Core/Table/ArcTables.js';
 import { addToDict } from '../node_modules/@fable-org/fable-library-js/MapUtil.js';
 import { ARCtrl_ArcInvestigation__ArcInvestigation_toFsWorkbook_Static_Z720BD3FF } from './Spreadsheet/ArcInvestigation.js';
 import { ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522 } from './Spreadsheet/ArcStudy.js';
-import { toFsWorkbook } from './Spreadsheet/DataMap.js';
+import { toFsWorkbook } from './Spreadsheet/Datamap.js';
 import { ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F } from './Spreadsheet/ArcAssay.js';
 import { ARCtrl_ArcWorkflow__ArcWorkflow_toFsWorkbook_Static_Z1C75CB0E } from './Spreadsheet/ArcWorkflow.js';
 import { ARCtrl_ArcRun__ArcRun_toFsWorkbook_Static_Z3EFAF6F8 } from './Spreadsheet/ArcRun.js';
 import { Dictionary_tryGet } from './fable_modules/FsSpreadsheet.7.0.0-alpha.1/Cells/FsCellsCollection.fs.js';
 import { ARCtrl_ArcStudy__ArcStudy_ToCreateContract_6FCE9E49, ARCtrl_ArcStudy__ArcStudy_ToUpdateContract, ARCtrl_ArcStudy__ArcStudy_tryFromReadContract_Static_7570923F } from './Contract/ArcStudy.js';
-import { ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForWorkflow_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForWorkflow_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForRun_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForRun_Z721C83C5, ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForWorkflow_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForRun_Static } from './Contract/Datamap.js';
+import { ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForStudy_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForAssay_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForWorkflow_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForRun_Z721C83C5, ARCtrl_Datamap__Datamap_tryFromReadContractForAssay_Static, ARCtrl_Datamap__Datamap_tryFromReadContractForStudy_Static, ARCtrl_Datamap__Datamap_tryFromReadContractForWorkflow_Static, ARCtrl_Datamap__Datamap_tryFromReadContractForRun_Static } from './Contract/Datamap.js';
 import { Init_createInitContract_6DFDD678, gitignoreContract, gitattributesContract, Init_createAddRemoteContract_Z721C83C5, Clone_createCloneContract_5000466F } from './Contract/Git.js';
 import { ofSeq as ofSeq$1 } from '../node_modules/@fable-org/fable-library-js/Map.js';
 import { fromString } from './fable_modules/Thoth.Json.JavaScript.0.4.1/Decode.fs.js';
@@ -465,7 +465,7 @@ class ARC extends ArcInvestigation {
       updateColumnOption(dataNameFunction_1, t.TryGetInputColumn());
       updateColumnOption(dataNameFunction_1, t.TryGetOutputColumn());
     };
-    const updateDataMap = (dataNameFunction_2, dm) => {
+    const updateDatamap = (dataNameFunction_2, dm) => {
       iterate((c_1) => {
         if (c_1.FilePath != null) {
           const newFilePath_1 = dataNameFunction_2(c_1);
@@ -477,16 +477,16 @@ class ARC extends ArcInvestigation {
       const f_1 = (d) => d.GetAbsolutePathForStudy(s.Identifier, checkExistenceFromRoot);
       const source_1 = s.Tables;
       iterate(curry2(updateTable)(f_1), source_1);
-      if (s.DataMap != null) {
-        updateDataMap(f_1, value(s.DataMap));
+      if (s.Datamap != null) {
+        updateDatamap(f_1, value(s.Datamap));
       }
     }, this$.Studies);
     iterate((a_1) => {
       const f_2 = (d_1) => d_1.GetAbsolutePathForAssay(a_1.Identifier, checkExistenceFromRoot);
       const source_3 = a_1.Tables;
       iterate(curry2(updateTable)(f_2), source_3);
-      if (a_1.DataMap != null) {
-        updateDataMap(f_2, value(a_1.DataMap));
+      if (a_1.Datamap != null) {
+        updateDatamap(f_2, value(a_1.Datamap));
       }
     }, this$.Assays);
   }
@@ -542,9 +542,9 @@ class ARC extends ArcInvestigation {
         const registeredStudy = value(registeredStudyOpt);
         registeredStudy.UpdateReferenceByStudyFile(study, true);
       }
-      const datamap = ARCAux_getStudyDataMapFromContracts(study.Identifier, contracts);
-      if (study.DataMap == null) {
-        study.DataMap = datamap;
+      const datamap = ARCAux_getStudyDatamapFromContracts(study.Identifier, contracts);
+      if (study.Datamap == null) {
+        study.Datamap = datamap;
       }
       study.StaticHash = study.GetLightHashCode() | 0;
     });
@@ -560,28 +560,28 @@ class ARC extends ArcInvestigation {
       let updatedTables;
       const array_6 = assay_1.StudiesRegisteredIn;
       updatedTables = fold((tables, study_1) => ArcTables.updateReferenceTablesBySheets(new ArcTables(study_1.Tables), tables, false), new ArcTables(assay_1.Tables), array_6);
-      const datamap_1 = ARCAux_getAssayDataMapFromContracts(assay_1.Identifier, contracts);
-      if (assay_1.DataMap == null) {
-        assay_1.DataMap = datamap_1;
+      const datamap_1 = ARCAux_getAssayDatamapFromContracts(assay_1.Identifier, contracts);
+      if (assay_1.Datamap == null) {
+        assay_1.Datamap = datamap_1;
       }
       assay_1.Tables = updatedTables.Tables;
     });
     workflows.forEach((workflow) => {
-      const datamap_2 = ARCAux_getWorkflowDataMapFromContracts(workflow.Identifier, contracts);
+      const datamap_2 = ARCAux_getWorkflowDatamapFromContracts(workflow.Identifier, contracts);
       const cwl = ARCAux_getWorkflowCWLFromContracts(workflow.Identifier, contracts);
-      if (workflow.DataMap == null) {
-        workflow.DataMap = datamap_2;
+      if (workflow.Datamap == null) {
+        workflow.Datamap = datamap_2;
       }
       workflow.CWLDescription = cwl;
       this$.AddWorkflow(workflow);
       workflow.StaticHash = workflow.GetLightHashCode() | 0;
     });
     runs.forEach((run) => {
-      const datamap_3 = ARCAux_getRunDataMapFromContracts(run.Identifier, contracts);
+      const datamap_3 = ARCAux_getRunDatamapFromContracts(run.Identifier, contracts);
       const cwl_1 = ARCAux_getRunCWLFromContracts(run.Identifier, contracts);
       const yml = ARCAux_getRunYMLFromContracts(run.Identifier, contracts);
-      if (run.DataMap == null) {
-        run.DataMap = datamap_3;
+      if (run.Datamap == null) {
+        run.Datamap = datamap_3;
       }
       run.CWLInput = defaultArg(yml, []);
       run.CWLDescription = cwl_1;
@@ -613,8 +613,8 @@ class ARC extends ArcInvestigation {
     iterate((s) => {
       s.StaticHash = s.GetLightHashCode() | 0;
       addToDict(filemap, Study_fileNameFromIdentifier(s.Identifier), ["ISA_Study", ARCtrl_ArcStudy__ArcStudy_toFsWorkbook_Static_Z4CEFA522(s)]);
-      if (s.DataMap != null) {
-        const dm = value(s.DataMap);
+      if (s.Datamap != null) {
+        const dm = value(s.Datamap);
         dm.StaticHash = safeHash(dm) | 0;
         addToDict(filemap, Study_datamapFileNameFromIdentifier(s.Identifier), ["ISA_Datamap", toFsWorkbook(dm)]);
       }
@@ -622,8 +622,8 @@ class ARC extends ArcInvestigation {
     iterate((a) => {
       a.StaticHash = a.GetLightHashCode() | 0;
       addToDict(filemap, Assay_fileNameFromIdentifier(a.Identifier), ["ISA_Assay", ARCtrl_ArcAssay__ArcAssay_toFsWorkbook_Static_Z2508BE4F(a)]);
-      if (a.DataMap != null) {
-        const dm_1 = value(a.DataMap);
+      if (a.Datamap != null) {
+        const dm_1 = value(a.Datamap);
         dm_1.StaticHash = safeHash(dm_1) | 0;
         addToDict(filemap, Assay_datamapFileNameFromIdentifier(a.Identifier), ["ISA_Datamap", toFsWorkbook(dm_1)]);
       }
@@ -634,8 +634,8 @@ class ARC extends ArcInvestigation {
       if (w.CWLDescription != null) {
         throw new Error("Not implemented yet: CWL description in ARC.GetWriteContracts");
       }
-      if (w.DataMap != null) {
-        const dm_2 = value(w.DataMap);
+      if (w.Datamap != null) {
+        const dm_2 = value(w.Datamap);
         dm_2.StaticHash = safeHash(dm_2) | 0;
         addToDict(filemap, Workflow_datamapFileNameFromIdentifier(w.Identifier), ["ISA_Datamap", toFsWorkbook(dm_2)]);
       }
@@ -649,8 +649,8 @@ class ARC extends ArcInvestigation {
       if (r.CWLInput.length > 0) {
         throw new Error("Not implemented yet: CWL YAML input in ARC.GetWriteContracts");
       }
-      if (r.DataMap != null) {
-        const dm_3 = value(r.DataMap);
+      if (r.Datamap != null) {
+        const dm_3 = value(r.Datamap);
         dm_3.StaticHash = safeHash(dm_3) | 0;
         addToDict(filemap, Run_datamapFileNameFromIdentifier(r.Identifier), ["ISA_Datamap", toFsWorkbook(dm_3)]);
       }
@@ -689,7 +689,7 @@ class ARC extends ArcInvestigation {
             return append(s.StaticHash === 0 ? ARCtrl_ArcStudy__ArcStudy_ToCreateContract_6FCE9E49(s, true) : s.StaticHash !== hash_1 ? singleton(ARCtrl_ArcStudy__ArcStudy_ToUpdateContract(s)) : empty(), delay(() => {
               let dm, dm_1;
               s.StaticHash = hash_1 | 0;
-              const matchValue = s.DataMap;
+              const matchValue = s.Datamap;
               let matchResult, dm_2, dm_3;
               if (matchValue != null) {
                 if (dm = value(matchValue), dm.StaticHash === 0) {
@@ -706,12 +706,12 @@ class ARC extends ArcInvestigation {
               }
               switch (matchResult) {
                 case 0:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToCreateContractForStudy_Z721C83C5(dm_2, s.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToCreateContractForStudy_Z721C83C5(dm_2, s.Identifier)), delay(() => {
                     dm_2.StaticHash = safeHash(dm_2) | 0;
                     return empty();
                   }));
                 case 1:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5(dm_3, s.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5(dm_3, s.Identifier)), delay(() => {
                     dm_3.StaticHash = safeHash(dm_3) | 0;
                     return empty();
                   }));
@@ -725,7 +725,7 @@ class ARC extends ArcInvestigation {
             return append(a.StaticHash === 0 ? ARCtrl_ArcAssay__ArcAssay_ToCreateContract_6FCE9E49(a, true) : a.StaticHash !== hash_2 ? singleton(ARCtrl_ArcAssay__ArcAssay_ToUpdateContract(a)) : empty(), delay(() => {
               let dm_4, dm_5;
               a.StaticHash = hash_2 | 0;
-              const matchValue_1 = a.DataMap;
+              const matchValue_1 = a.Datamap;
               let matchResult_1, dm_6, dm_7;
               if (matchValue_1 != null) {
                 if (dm_4 = value(matchValue_1), dm_4.StaticHash === 0) {
@@ -742,12 +742,12 @@ class ARC extends ArcInvestigation {
               }
               switch (matchResult_1) {
                 case 0:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToCreateContractForAssay_Z721C83C5(dm_6, a.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToCreateContractForAssay_Z721C83C5(dm_6, a.Identifier)), delay(() => {
                     dm_6.StaticHash = safeHash(dm_6) | 0;
                     return empty();
                   }));
                 case 1:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5(dm_7, a.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5(dm_7, a.Identifier)), delay(() => {
                     dm_7.StaticHash = safeHash(dm_7) | 0;
                     return empty();
                   }));
@@ -761,7 +761,7 @@ class ARC extends ArcInvestigation {
             return append(w.StaticHash === 0 ? ARCtrl_ArcWorkflow__ArcWorkflow_ToCreateContract_6FCE9E49(w, true) : w.StaticHash !== hash_3 ? singleton(ARCtrl_ArcWorkflow__ArcWorkflow_ToUpdateContract(w)) : empty(), delay(() => {
               let dm_8, dm_9;
               w.StaticHash = hash_3 | 0;
-              const matchValue_2 = w.DataMap;
+              const matchValue_2 = w.Datamap;
               let matchResult_2, dm_10, dm_11;
               if (matchValue_2 != null) {
                 if (dm_8 = value(matchValue_2), dm_8.StaticHash === 0) {
@@ -778,12 +778,12 @@ class ARC extends ArcInvestigation {
               }
               switch (matchResult_2) {
                 case 0:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToCreateContractForWorkflow_Z721C83C5(dm_10, w.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToCreateContractForWorkflow_Z721C83C5(dm_10, w.Identifier)), delay(() => {
                     dm_10.StaticHash = safeHash(dm_10) | 0;
                     return empty();
                   }));
                 case 1:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToUpdateContractForWorkflow_Z721C83C5(dm_11, w.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5(dm_11, w.Identifier)), delay(() => {
                     dm_11.StaticHash = safeHash(dm_11) | 0;
                     return empty();
                   }));
@@ -797,7 +797,7 @@ class ARC extends ArcInvestigation {
             return append(r.StaticHash === 0 ? ARCtrl_ArcRun__ArcRun_ToCreateContract_6FCE9E49(r, true) : r.StaticHash !== hash_4 ? singleton(ARCtrl_ArcRun__ArcRun_ToUpdateContract(r)) : empty(), delay(() => {
               let dm_12, dm_13;
               r.StaticHash = hash_4 | 0;
-              const matchValue_3 = r.DataMap;
+              const matchValue_3 = r.Datamap;
               let matchResult_3, dm_14, dm_15;
               if (matchValue_3 != null) {
                 if (dm_12 = value(matchValue_3), dm_12.StaticHash === 0) {
@@ -814,12 +814,12 @@ class ARC extends ArcInvestigation {
               }
               switch (matchResult_3) {
                 case 0:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToCreateContractForRun_Z721C83C5(dm_14, r.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToCreateContractForRun_Z721C83C5(dm_14, r.Identifier)), delay(() => {
                     dm_14.StaticHash = safeHash(dm_14) | 0;
                     return empty();
                   }));
                 case 1:
-                  return append(singleton(ARCtrl_DataMap__DataMap_ToUpdateContractForRun_Z721C83C5(dm_15, r.Identifier)), delay(() => {
+                  return append(singleton(ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5(dm_15, r.Identifier)), delay(() => {
                     dm_15.StaticHash = safeHash(dm_15) | 0;
                     return empty();
                   }));
@@ -1084,17 +1084,17 @@ function ARCAux_getArcWorkflowsFromContracts(contracts) {
 function ARCAux_getArcRunsFromContracts(contracts) {
   return choose(ARCtrl_ArcRun__ArcRun_tryFromReadContract_Static_7570923F, contracts);
 }
-function ARCAux_getAssayDataMapFromContracts(assayIdentifier, contracts) {
-  return tryPick((c) => ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static(assayIdentifier, c), contracts);
+function ARCAux_getAssayDatamapFromContracts(assayIdentifier, contracts) {
+  return tryPick((c) => ARCtrl_Datamap__Datamap_tryFromReadContractForAssay_Static(assayIdentifier, c), contracts);
 }
-function ARCAux_getStudyDataMapFromContracts(studyIdentifier, contracts) {
-  return tryPick((c) => ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static(studyIdentifier, c), contracts);
+function ARCAux_getStudyDatamapFromContracts(studyIdentifier, contracts) {
+  return tryPick((c) => ARCtrl_Datamap__Datamap_tryFromReadContractForStudy_Static(studyIdentifier, c), contracts);
 }
-function ARCAux_getWorkflowDataMapFromContracts(workflowIdentifier, contracts) {
-  return tryPick((c) => ARCtrl_DataMap__DataMap_tryFromReadContractForWorkflow_Static(workflowIdentifier, c), contracts);
+function ARCAux_getWorkflowDatamapFromContracts(workflowIdentifier, contracts) {
+  return tryPick((c) => ARCtrl_Datamap__Datamap_tryFromReadContractForWorkflow_Static(workflowIdentifier, c), contracts);
 }
-function ARCAux_getRunDataMapFromContracts(runIdentifier, contracts) {
-  return tryPick((c) => ARCtrl_DataMap__DataMap_tryFromReadContractForRun_Static(runIdentifier, c), contracts);
+function ARCAux_getRunDatamapFromContracts(runIdentifier, contracts) {
+  return tryPick((c) => ARCtrl_Datamap__Datamap_tryFromReadContractForRun_Static(runIdentifier, c), contracts);
 }
 function ARCAux_getWorkflowCWLFromContracts(workflowIdentifier, contracts) {
   return tryPick((c) => ARCtrl_ArcWorkflow__ArcWorkflow_tryCWLFromReadContract_Static(workflowIdentifier, c), contracts);
@@ -1119,16 +1119,16 @@ function ARCAux_getLicenseFromContracts(contracts) {
 }
 function ARCAux_updateFSByARC(isa, license, fs) {
   let assaysFolder;
-  const assays = map((a) => FileSystemTree.createAssayFolder(a.Identifier, a.DataMap != null), toArray(isa.Assays));
+  const assays = map((a) => FileSystemTree.createAssayFolder(a.Identifier, a.Datamap != null), toArray(isa.Assays));
   assaysFolder = FileSystemTree.createAssaysFolder(assays);
   let studiesFolder;
-  const studies = map((s) => FileSystemTree.createStudyFolder(s.Identifier, s.DataMap != null), toArray(isa.Studies));
+  const studies = map((s) => FileSystemTree.createStudyFolder(s.Identifier, s.Datamap != null), toArray(isa.Studies));
   studiesFolder = FileSystemTree.createStudiesFolder(studies);
   let workflowsFolder;
-  const workflows = map((w) => FileSystemTree.createWorkflowFolder(w.Identifier, w.CWLDescription != null, w.DataMap != null), toArray(isa.Workflows));
+  const workflows = map((w) => FileSystemTree.createWorkflowFolder(w.Identifier, w.CWLDescription != null, w.Datamap != null), toArray(isa.Workflows));
   workflowsFolder = FileSystemTree.createWorkflowsFolder(workflows);
   let runsFolder;
-  const runs = map((r) => FileSystemTree.createRunFolder(r.Identifier, r.CWLDescription != null, r.CWLInput.length > 0, r.DataMap != null), toArray(isa.Runs));
+  const runs = map((r) => FileSystemTree.createRunFolder(r.Identifier, r.CWLDescription != null, r.CWLInput.length > 0, r.Datamap != null), toArray(isa.Runs));
   runsFolder = FileSystemTree.createRunsFolder(runs);
   const investigation = FileSystemTree.createInvestigationFile();
   let tree_1;
@@ -1139,4 +1139,4 @@ function ARCAux_updateFSByARC(isa, license, fs) {
   return fs.Union(tree_1);
 }
-export { ARC, ARCAux_getArcAssaysFromContracts, ARCAux_getArcInvestigationFromContracts, ARCAux_getArcRunsFromContracts, ARCAux_getArcStudiesFromContracts, ARCAux_getArcWorkflowsFromContracts, ARCAux_getAssayDataMapFromContracts, ARCAux_getLicenseFromContracts, ARCAux_getRunCWLFromContracts, ARCAux_getRunDataMapFromContracts, ARCAux_getRunYMLFromContracts, ARCAux_getStudyDataMapFromContracts, ARCAux_getWorkflowCWLFromContracts, ARCAux_getWorkflowDataMapFromContracts, ARCAux_updateFSByARC, ARC_$ctor_Z443FB9BF, ARC_$reflection };
+export { ARC, ARCAux_getArcAssaysFromContracts, ARCAux_getArcInvestigationFromContracts, ARCAux_getArcRunsFromContracts, ARCAux_getArcStudiesFromContracts, ARCAux_getArcWorkflowsFromContracts, ARCAux_getAssayDatamapFromContracts, ARCAux_getLicenseFromContracts, ARCAux_getRunCWLFromContracts, ARCAux_getRunDatamapFromContracts, ARCAux_getRunYMLFromContracts, ARCAux_getStudyDatamapFromContracts, ARCAux_getWorkflowCWLFromContracts, ARCAux_getWorkflowDatamapFromContracts, ARCAux_updateFSByARC, ARC_$ctor_Z443FB9BF, ARC_$reflection };

package/dist/ts/ts/Contract/Datamap.d.ts CHANGED Viewed

@@ -1,29 +1,29 @@
 import { Option } from '@fable-org/fable-library-js/Option.js';
 import { Contract } from './Contract.js';
-import { DataMap } from '../Core/DataMap.js';
+import { Datamap } from '../Core/Datamap.js';
 export declare function $007CDatamapPath$007C_$007C(input: string[]): Option<string>;
-export declare function ARCtrl_DataMap__DataMap_ToCreateContractForAssay_Z721C83C5(this$: DataMap, assayIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5(this$: DataMap, assayIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToDeleteContractForAssay_Z721C83C5(this$: DataMap, assayIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_toDeleteContractForAssay_Static_Z721C83C5(assayIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_toUpdateContractForAssay_Static_Z721C83C5(assayIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static(assayIdentifier: string, c: Contract): Option<DataMap>;
-export declare function ARCtrl_DataMap__DataMap_ToCreateContractForStudy_Z721C83C5(this$: DataMap, studyIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5(this$: DataMap, studyIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToDeleteContractForStudy_Z721C83C5(this$: DataMap, studyIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_toDeleteContractForStudy_Static_Z721C83C5(studyIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_toUpdateContractForStudy_Static_Z721C83C5(studyIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static(studyIdentifier: string, c: Contract): Option<DataMap>;
-export declare function ARCtrl_DataMap__DataMap_ToCreateContractForWorkflow_Z721C83C5(this$: DataMap, workflowIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToUpdateContractForWorkflow_Z721C83C5(this$: DataMap, workflowIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToDeleteContractForWorkflow_Z721C83C5(this$: DataMap, workflowIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_toDeleteContractForWorkflow_Static_Z721C83C5(workflowIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_toUpdateContractForWorkflow_Static_Z721C83C5(workflowIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_tryFromReadContractForWorkflow_Static(workflowIdentifier: string, c: Contract): Option<DataMap>;
-export declare function ARCtrl_DataMap__DataMap_ToCreateContractForRun_Z721C83C5(this$: DataMap, runIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToUpdateContractForRun_Z721C83C5(this$: DataMap, runIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_ToDeleteContractForRun_Z721C83C5(this$: DataMap, runIdentifier: string): Contract;
-export declare function ARCtrl_DataMap__DataMap_toDeleteContractForRun_Static_Z721C83C5(runIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_toUpdateContractForRun_Static_Z721C83C5(runIdentifier: string): ((arg0: DataMap) => Contract);
-export declare function ARCtrl_DataMap__DataMap_tryFromReadContractForRun_Static(runIdentifier: string, c: Contract): Option<DataMap>;
+export declare function ARCtrl_Datamap__Datamap_ToCreateContractForAssay_Z721C83C5(this$: Datamap, assayIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5(this$: Datamap, assayIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToDeleteContractForAssay_Z721C83C5(this$: Datamap, assayIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_toDeleteContractForAssay_Static_Z721C83C5(assayIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_toUpdateContractForAssay_Static_Z721C83C5(assayIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_tryFromReadContractForAssay_Static(assayIdentifier: string, c: Contract): Option<Datamap>;
+export declare function ARCtrl_Datamap__Datamap_ToCreateContractForStudy_Z721C83C5(this$: Datamap, studyIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5(this$: Datamap, studyIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToDeleteContractForStudy_Z721C83C5(this$: Datamap, studyIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_toDeleteContractForStudy_Static_Z721C83C5(studyIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_toUpdateContractForStudy_Static_Z721C83C5(studyIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_tryFromReadContractForStudy_Static(studyIdentifier: string, c: Contract): Option<Datamap>;
+export declare function ARCtrl_Datamap__Datamap_ToCreateContractForWorkflow_Z721C83C5(this$: Datamap, workflowIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5(this$: Datamap, workflowIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToDeleteContractForWorkflow_Z721C83C5(this$: Datamap, workflowIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_toDeleteContractForWorkflow_Static_Z721C83C5(workflowIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_toUpdateContractForWorkflow_Static_Z721C83C5(workflowIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_tryFromReadContractForWorkflow_Static(workflowIdentifier: string, c: Contract): Option<Datamap>;
+export declare function ARCtrl_Datamap__Datamap_ToCreateContractForRun_Z721C83C5(this$: Datamap, runIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5(this$: Datamap, runIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_ToDeleteContractForRun_Z721C83C5(this$: Datamap, runIdentifier: string): Contract;
+export declare function ARCtrl_Datamap__Datamap_toDeleteContractForRun_Static_Z721C83C5(runIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_toUpdateContractForRun_Static_Z721C83C5(runIdentifier: string): ((arg0: Datamap) => Contract);
+export declare function ARCtrl_Datamap__Datamap_tryFromReadContractForRun_Static(runIdentifier: string, c: Contract): Option<Datamap>;
 //# sourceMappingURL=Datamap.d.ts.map

package/dist/ts/ts/Contract/Datamap.js CHANGED Viewed

@@ -4,7 +4,7 @@ import { defaultOf, safeHash } from '../../node_modules/@fable-org/fable-library
 import { value } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { Assay_datamapFileNameFromIdentifier, Study_datamapFileNameFromIdentifier, Workflow_datamapFileNameFromIdentifier, Run_datamapFileNameFromIdentifier } from '../Core/Helper/Identifier.js';
 import { Contract } from './Contract.js';
-import { toFsWorkbook, fromFsWorkbook } from '../Spreadsheet/DataMap.js';
+import { toFsWorkbook, fromFsWorkbook } from '../Spreadsheet/Datamap.js';
 function $007CDatamapPath$007C_$007C(input) {
   let matchResult;
@@ -60,25 +60,25 @@ function $007CDatamapPath$007C_$007C(input) {
       return void 0;
   }
 }
-function ARCtrl_DataMap__DataMap_ToCreateContractForAssay_Z721C83C5(this$, assayIdentifier) {
+function ARCtrl_Datamap__Datamap_ToCreateContractForAssay_Z721C83C5(this$, assayIdentifier) {
   const path = Assay_datamapFileNameFromIdentifier(assayIdentifier);
   return Contract.createCreate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5(this$, assayIdentifier) {
+function ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5(this$, assayIdentifier) {
   const path = Assay_datamapFileNameFromIdentifier(assayIdentifier);
   return Contract.createUpdate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToDeleteContractForAssay_Z721C83C5(this$, assayIdentifier) {
+function ARCtrl_Datamap__Datamap_ToDeleteContractForAssay_Z721C83C5(this$, assayIdentifier) {
   const path = Assay_datamapFileNameFromIdentifier(assayIdentifier);
   return Contract.createDelete(path);
 }
-function ARCtrl_DataMap__DataMap_toDeleteContractForAssay_Static_Z721C83C5(assayIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToDeleteContractForAssay_Z721C83C5(dataMap, assayIdentifier);
+function ARCtrl_Datamap__Datamap_toDeleteContractForAssay_Static_Z721C83C5(assayIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToDeleteContractForAssay_Z721C83C5(datamap, assayIdentifier);
 }
-function ARCtrl_DataMap__DataMap_toUpdateContractForAssay_Static_Z721C83C5(assayIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5(dataMap, assayIdentifier);
+function ARCtrl_Datamap__Datamap_toUpdateContractForAssay_Static_Z721C83C5(assayIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5(datamap, assayIdentifier);
 }
-function ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static(assayIdentifier, c) {
+function ARCtrl_Datamap__Datamap_tryFromReadContractForAssay_Static(assayIdentifier, c) {
   let fsworkbook;
   const path = Assay_datamapFileNameFromIdentifier(assayIdentifier);
   let matchResult, fsworkbook_1, p_1;
@@ -115,25 +115,25 @@ function ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static(assayIdentif
       return void 0;
   }
 }
-function ARCtrl_DataMap__DataMap_ToCreateContractForStudy_Z721C83C5(this$, studyIdentifier) {
+function ARCtrl_Datamap__Datamap_ToCreateContractForStudy_Z721C83C5(this$, studyIdentifier) {
   const path = Study_datamapFileNameFromIdentifier(studyIdentifier);
   return Contract.createCreate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5(this$, studyIdentifier) {
+function ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5(this$, studyIdentifier) {
   const path = Study_datamapFileNameFromIdentifier(studyIdentifier);
   return Contract.createUpdate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToDeleteContractForStudy_Z721C83C5(this$, studyIdentifier) {
+function ARCtrl_Datamap__Datamap_ToDeleteContractForStudy_Z721C83C5(this$, studyIdentifier) {
   const path = Study_datamapFileNameFromIdentifier(studyIdentifier);
   return Contract.createDelete(path);
 }
-function ARCtrl_DataMap__DataMap_toDeleteContractForStudy_Static_Z721C83C5(studyIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToDeleteContractForStudy_Z721C83C5(dataMap, studyIdentifier);
+function ARCtrl_Datamap__Datamap_toDeleteContractForStudy_Static_Z721C83C5(studyIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToDeleteContractForStudy_Z721C83C5(datamap, studyIdentifier);
 }
-function ARCtrl_DataMap__DataMap_toUpdateContractForStudy_Static_Z721C83C5(studyIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5(dataMap, studyIdentifier);
+function ARCtrl_Datamap__Datamap_toUpdateContractForStudy_Static_Z721C83C5(studyIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5(datamap, studyIdentifier);
 }
-function ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static(studyIdentifier, c) {
+function ARCtrl_Datamap__Datamap_tryFromReadContractForStudy_Static(studyIdentifier, c) {
   let fsworkbook;
   const path = Study_datamapFileNameFromIdentifier(studyIdentifier);
   let matchResult, fsworkbook_1, p_1;
@@ -170,25 +170,25 @@ function ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static(studyIdentif
       return void 0;
   }
 }
-function ARCtrl_DataMap__DataMap_ToCreateContractForWorkflow_Z721C83C5(this$, workflowIdentifier) {
+function ARCtrl_Datamap__Datamap_ToCreateContractForWorkflow_Z721C83C5(this$, workflowIdentifier) {
   const path = Workflow_datamapFileNameFromIdentifier(workflowIdentifier);
   return Contract.createCreate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToUpdateContractForWorkflow_Z721C83C5(this$, workflowIdentifier) {
+function ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5(this$, workflowIdentifier) {
   const path = Workflow_datamapFileNameFromIdentifier(workflowIdentifier);
   return Contract.createUpdate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToDeleteContractForWorkflow_Z721C83C5(this$, workflowIdentifier) {
+function ARCtrl_Datamap__Datamap_ToDeleteContractForWorkflow_Z721C83C5(this$, workflowIdentifier) {
   const path = Workflow_datamapFileNameFromIdentifier(workflowIdentifier);
   return Contract.createDelete(path);
 }
-function ARCtrl_DataMap__DataMap_toDeleteContractForWorkflow_Static_Z721C83C5(workflowIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToDeleteContractForWorkflow_Z721C83C5(dataMap, workflowIdentifier);
+function ARCtrl_Datamap__Datamap_toDeleteContractForWorkflow_Static_Z721C83C5(workflowIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToDeleteContractForWorkflow_Z721C83C5(datamap, workflowIdentifier);
 }
-function ARCtrl_DataMap__DataMap_toUpdateContractForWorkflow_Static_Z721C83C5(workflowIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToUpdateContractForWorkflow_Z721C83C5(dataMap, workflowIdentifier);
+function ARCtrl_Datamap__Datamap_toUpdateContractForWorkflow_Static_Z721C83C5(workflowIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5(datamap, workflowIdentifier);
 }
-function ARCtrl_DataMap__DataMap_tryFromReadContractForWorkflow_Static(workflowIdentifier, c) {
+function ARCtrl_Datamap__Datamap_tryFromReadContractForWorkflow_Static(workflowIdentifier, c) {
   let fsworkbook;
   const path = Workflow_datamapFileNameFromIdentifier(workflowIdentifier);
   let matchResult, fsworkbook_1, p_1;
@@ -225,25 +225,25 @@ function ARCtrl_DataMap__DataMap_tryFromReadContractForWorkflow_Static(workflowI
       return void 0;
   }
 }
-function ARCtrl_DataMap__DataMap_ToCreateContractForRun_Z721C83C5(this$, runIdentifier) {
+function ARCtrl_Datamap__Datamap_ToCreateContractForRun_Z721C83C5(this$, runIdentifier) {
   const path = Run_datamapFileNameFromIdentifier(runIdentifier);
   return Contract.createCreate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToUpdateContractForRun_Z721C83C5(this$, runIdentifier) {
+function ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5(this$, runIdentifier) {
   const path = Run_datamapFileNameFromIdentifier(runIdentifier);
   return Contract.createUpdate(path, "ISA_Datamap", toFsWorkbook(this$));
 }
-function ARCtrl_DataMap__DataMap_ToDeleteContractForRun_Z721C83C5(this$, runIdentifier) {
+function ARCtrl_Datamap__Datamap_ToDeleteContractForRun_Z721C83C5(this$, runIdentifier) {
   const path = Run_datamapFileNameFromIdentifier(runIdentifier);
   return Contract.createDelete(path);
 }
-function ARCtrl_DataMap__DataMap_toDeleteContractForRun_Static_Z721C83C5(runIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToDeleteContractForRun_Z721C83C5(dataMap, runIdentifier);
+function ARCtrl_Datamap__Datamap_toDeleteContractForRun_Static_Z721C83C5(runIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToDeleteContractForRun_Z721C83C5(datamap, runIdentifier);
 }
-function ARCtrl_DataMap__DataMap_toUpdateContractForRun_Static_Z721C83C5(runIdentifier) {
-  return (dataMap) => ARCtrl_DataMap__DataMap_ToUpdateContractForRun_Z721C83C5(dataMap, runIdentifier);
+function ARCtrl_Datamap__Datamap_toUpdateContractForRun_Static_Z721C83C5(runIdentifier) {
+  return (datamap) => ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5(datamap, runIdentifier);
 }
-function ARCtrl_DataMap__DataMap_tryFromReadContractForRun_Static(runIdentifier, c) {
+function ARCtrl_Datamap__Datamap_tryFromReadContractForRun_Static(runIdentifier, c) {
   let fsworkbook;
   const path = Run_datamapFileNameFromIdentifier(runIdentifier);
   let matchResult, fsworkbook_1, p_1;
@@ -281,4 +281,4 @@ function ARCtrl_DataMap__DataMap_tryFromReadContractForRun_Static(runIdentifier,
   }
 }
-export { $007CDatamapPath$007C_$007C, ARCtrl_DataMap__DataMap_ToCreateContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForRun_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_ToCreateContractForWorkflow_Z721C83C5, ARCtrl_DataMap__DataMap_ToDeleteContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToDeleteContractForRun_Z721C83C5, ARCtrl_DataMap__DataMap_ToDeleteContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_ToDeleteContractForWorkflow_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForAssay_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForRun_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForStudy_Z721C83C5, ARCtrl_DataMap__DataMap_ToUpdateContractForWorkflow_Z721C83C5, ARCtrl_DataMap__DataMap_toDeleteContractForAssay_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toDeleteContractForRun_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toDeleteContractForStudy_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toDeleteContractForWorkflow_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toUpdateContractForAssay_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toUpdateContractForRun_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toUpdateContractForStudy_Static_Z721C83C5, ARCtrl_DataMap__DataMap_toUpdateContractForWorkflow_Static_Z721C83C5, ARCtrl_DataMap__DataMap_tryFromReadContractForAssay_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForRun_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForStudy_Static, ARCtrl_DataMap__DataMap_tryFromReadContractForWorkflow_Static };
+export { $007CDatamapPath$007C_$007C, ARCtrl_Datamap__Datamap_ToCreateContractForAssay_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForRun_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForStudy_Z721C83C5, ARCtrl_Datamap__Datamap_ToCreateContractForWorkflow_Z721C83C5, ARCtrl_Datamap__Datamap_ToDeleteContractForAssay_Z721C83C5, ARCtrl_Datamap__Datamap_ToDeleteContractForRun_Z721C83C5, ARCtrl_Datamap__Datamap_ToDeleteContractForStudy_Z721C83C5, ARCtrl_Datamap__Datamap_ToDeleteContractForWorkflow_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForAssay_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForRun_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForStudy_Z721C83C5, ARCtrl_Datamap__Datamap_ToUpdateContractForWorkflow_Z721C83C5, ARCtrl_Datamap__Datamap_toDeleteContractForAssay_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toDeleteContractForRun_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toDeleteContractForStudy_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toDeleteContractForWorkflow_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toUpdateContractForAssay_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toUpdateContractForRun_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toUpdateContractForStudy_Static_Z721C83C5, ARCtrl_Datamap__Datamap_toUpdateContractForWorkflow_Static_Z721C83C5, ARCtrl_Datamap__Datamap_tryFromReadContractForAssay_Static, ARCtrl_Datamap__Datamap_tryFromReadContractForRun_Static, ARCtrl_Datamap__Datamap_tryFromReadContractForStudy_Static, ARCtrl_Datamap__Datamap_tryFromReadContractForWorkflow_Static };

package/dist/ts/ts/Conversion/Assay.js CHANGED Viewed

@@ -10,8 +10,8 @@ import { BaseTypes_composeDefinedTerm_ZDED3A0F, BaseTypes_composePropertyValueFr
 import { PersonConversion_composePerson_Z64D846DC, PersonConversion_decomposePerson_Z6839B9E8 } from './Person.js';
 import { ARCtrl_ArcTables__ArcTables_GetProcesses_5E660E5C, ARCtrl_ArcTables__ArcTables_fromProcesses_Static_Z27F0B586 } from './Table.js';
 import { ArcTables } from '../Core/Table/ArcTables.js';
-import { DatamapConversion_composeFragmentDescriptors_Z8923FA3, DatamapConversion_decomposeFragmentDescriptors_Z6E59645F } from './Datamap.js';
-import { DataMap } from '../Core/DataMap.js';
+import { DatamapConversion_composeFragmentDescriptors_Z892BFC3, DatamapConversion_decomposeFragmentDescriptors_Z6E59645F } from './Datamap.js';
+import { Datamap } from '../Core/Datamap.js';
 import { ArcAssay } from '../Core/ArcTypes.js';
 import { ofSeq } from '../../node_modules/@fable-org/fable-library-js/List.js';
@@ -47,7 +47,7 @@ function AssayConversion_composeAssay_Z5C53FD5C(assay, fs) {
   const variableMeasured = map(BaseTypes_composePropertyValueFromOA_ZDED3A0F, assay.MeasurementType);
   const creators = Option_fromSeq(ResizeArray_map(PersonConversion_composePerson_Z64D846DC, assay.Performers));
   const processSequence = Option_fromSeq((collection = ARCtrl_ArcTables__ArcTables_GetProcesses_5E660E5C(new ArcTables(assay.Tables), assay.Identifier, void 0, unwrap(fs)), Array.from(collection)));
-  const fragmentDescriptors = map(DatamapConversion_composeFragmentDescriptors_Z8923FA3, assay.DataMap);
+  const fragmentDescriptors = map(DatamapConversion_composeFragmentDescriptors_Z892BFC3, assay.Datamap);
   const dataFiles = map((ps) => AssayConversion_getDataFilesFromProcesses_6BABD1B0(ps, unwrap(fragmentDescriptors)), processSequence);
   const variableMeasureds = variableMeasured == null ? fragmentDescriptors == null ? void 0 : (fds_1 = value(fragmentDescriptors), fds_1) : fragmentDescriptors == null ? (vm_1 = value(variableMeasured), ResizeArray_singleton(vm_1)) : (fds = value(fragmentDescriptors), vm = value(variableMeasured), ResizeArray_appendSingleton(vm, fds));
   const comments = Option_fromSeq(ResizeArray_map(BaseTypes_composeComment_Z13201A7E, assay.Comments));
@@ -58,12 +58,12 @@ function AssayConversion_decomposeAssay_Z6839B9E8(assay, graph, context) {
   const measurementTechnique = map((m_1) => BaseTypes_decomposeDefinedTerm_Z2F770004(m_1, unwrap(context)), LDDataset.tryGetMeasurementTechniqueAsDefinedTerm(assay, unwrap(graph), unwrap(context)));
   const variableMeasured = map((v) => BaseTypes_decomposePropertyValueToOA_Z2F770004(v, unwrap(context)), LDDataset.tryGetVariableMeasuredAsMeasurementType(assay, unwrap(graph), unwrap(context)));
   const perfomers = ResizeArray_map((c) => PersonConversion_decomposePerson_Z6839B9E8(c, unwrap(graph), unwrap(context)), LDDataset.getCreators(assay, unwrap(graph), unwrap(context)));
-  let dataMap;
+  let datamap;
   const v_1 = DatamapConversion_decomposeFragmentDescriptors_Z6E59645F(LDDataset.getVariableMeasuredAsFragmentDescriptors(assay, unwrap(graph), unwrap(context)), unwrap(graph), unwrap(context));
-  dataMap = Option_fromValueWithDefault(DataMap.init(), v_1);
+  datamap = Option_fromValueWithDefault(Datamap.init(), v_1);
   const tables = ARCtrl_ArcTables__ArcTables_fromProcesses_Static_Z27F0B586(ofSeq(LDDataset.getAboutsAsLabProcess(assay, unwrap(graph), unwrap(context))), unwrap(graph), unwrap(context));
   const comments = ResizeArray_map((c_1) => BaseTypes_decomposeComment_Z2F770004(c_1, unwrap(context)), LDDataset.getComments(assay, unwrap(graph), unwrap(context)));
-  return ArcAssay.create(LDDataset.getIdentifierAsString(assay, unwrap(context)), unwrap(LDDataset.tryGetNameAsString(assay, unwrap(context))), unwrap(LDDataset.tryGetDescriptionAsString(assay, unwrap(context))), unwrap(variableMeasured), unwrap(measurementMethod), unwrap(measurementTechnique), tables.Tables, unwrap(dataMap), perfomers, comments);
+  return ArcAssay.create(LDDataset.getIdentifierAsString(assay, unwrap(context)), unwrap(LDDataset.tryGetNameAsString(assay, unwrap(context))), unwrap(LDDataset.tryGetDescriptionAsString(assay, unwrap(context))), unwrap(variableMeasured), unwrap(measurementMethod), unwrap(measurementTechnique), tables.Tables, unwrap(datamap), perfomers, comments);
 }
 export { AssayConversion, AssayConversion_$reflection, AssayConversion_composeAssay_Z5C53FD5C, AssayConversion_decomposeAssay_Z6839B9E8, AssayConversion_getDataFilesFromProcesses_6BABD1B0 };

package/dist/ts/ts/Conversion/ColumnIndex.d.ts CHANGED Viewed

@@ -2,6 +2,7 @@ import { int32 } from '@fable-org/fable-library-js/Int32.js';
 import { Option } from '@fable-org/fable-library-js/Option.js';
 import { LDNode } from '../ROCrate/LDObject.js';
 export declare const orderName = "columnIndex";
+export declare const columndIndexProperty = "https://w3id.org/ro/terms/arc#columnIndex";
 export declare function tryGetIndex(node: LDNode): Option<int32>;
 export declare function setIndex(node: LDNode, index: int32): void;
 export declare function ARCtrl_ROCrate_LDNode__LDNode_GetColumnIndex(this$: LDNode): int32;