@nfdi4plants/arctrl 3.0.0-beta.12 → 3.0.0-beta.14

package/dist/ts/ts/Core/{DataMap.d.ts → Datamap.d.ts}

@@ -6,31 +6,31 @@ import { CompositeCell_$union } from './Table/CompositeCell.js';
 import { DataContext } from './DataContext.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';
 import { TypeInfo } from '@fable-org/fable-library-js/Reflection.js';
-export declare const DataMapAux_dataHeader: CompositeHeader_$union;
-export declare const DataMapAux_explication: OntologyAnnotation;
-export declare const DataMapAux_explicationHeader: CompositeHeader_$union;
-export declare const DataMapAux_unit: OntologyAnnotation;
-export declare const DataMapAux_unitHeader: CompositeHeader_$union;
-export declare const DataMapAux_objectType: OntologyAnnotation;
-export declare const DataMapAux_objectTypeHeader: CompositeHeader_$union;
-export declare const DataMapAux_labelHeader: CompositeHeader_$union;
-export declare const DataMapAux_descriptionHeader: CompositeHeader_$union;
-export declare const DataMapAux_generatedByHeader: CompositeHeader_$union;
-export declare const DataMapAux_allowedHeaders: FSharpList<CompositeHeader_$union>;
-export declare function DataMapAux_getOntologyColumn(f: ((arg0: DataContext) => Option<OntologyAnnotation>), dataContexts: DataContext[]): CompositeCell_$union[];
-export declare function DataMapAux_getStringColumn(f: ((arg0: DataContext) => Option<string>), dataContexts: DataContext[]): CompositeCell_$union[];
-export declare function DataMapAux_setOntologyColumn(f: ((arg0: DataContext, arg1: Option<OntologyAnnotation>) => void), column: CompositeCell_$union[], dataContexts: DataContext[]): void;
-export declare function DataMapAux_setStringColumn(f: ((arg0: DataContext, arg1: Option<string>) => void), column: CompositeCell_$union[], dataContexts: DataContext[]): void;
-export declare function DataMapAux_SanityChecks_rowIndexInBoundaries(row: int32, dataContexts: DataContext[]): void;
-export declare function DataMapAux_SanityChecks_lengthOfNewColumn(newColumn: CompositeCell_$union[], dataContexts: DataContext[]): void;
-export declare class DataMap {
+export declare const DatamapAux_dataHeader: CompositeHeader_$union;
+export declare const DatamapAux_explication: OntologyAnnotation;
+export declare const DatamapAux_explicationHeader: CompositeHeader_$union;
+export declare const DatamapAux_unit: OntologyAnnotation;
+export declare const DatamapAux_unitHeader: CompositeHeader_$union;
+export declare const DatamapAux_objectType: OntologyAnnotation;
+export declare const DatamapAux_objectTypeHeader: CompositeHeader_$union;
+export declare const DatamapAux_labelHeader: CompositeHeader_$union;
+export declare const DatamapAux_descriptionHeader: CompositeHeader_$union;
+export declare const DatamapAux_generatedByHeader: CompositeHeader_$union;
+export declare const DatamapAux_allowedHeaders: FSharpList<CompositeHeader_$union>;
+export declare function DatamapAux_getOntologyColumn(f: ((arg0: DataContext) => Option<OntologyAnnotation>), dataContexts: DataContext[]): CompositeCell_$union[];
+export declare function DatamapAux_getStringColumn(f: ((arg0: DataContext) => Option<string>), dataContexts: DataContext[]): CompositeCell_$union[];
+export declare function DatamapAux_setOntologyColumn(f: ((arg0: DataContext, arg1: Option<OntologyAnnotation>) => void), column: CompositeCell_$union[], dataContexts: DataContext[]): void;
+export declare function DatamapAux_setStringColumn(f: ((arg0: DataContext, arg1: Option<string>) => void), column: CompositeCell_$union[], dataContexts: DataContext[]): void;
+export declare function DatamapAux_SanityChecks_rowIndexInBoundaries(row: int32, dataContexts: DataContext[]): void;
+export declare function DatamapAux_SanityChecks_lengthOfNewColumn(newColumn: CompositeCell_$union[], dataContexts: DataContext[]): void;
+export declare class Datamap {
     staticHash: int32;
     "dataContexts@108": DataContext[];
     constructor(dataContexts: DataContext[]);
     get StaticHash(): int32;
     set StaticHash(value: int32);
     get DataContexts(): DataContext[];
-    static init(): DataMap;
+    static init(): Datamap;
     GetExplicationColumn(): CompositeCell_$union[];
     SetExplicationColumn(cells: CompositeCell_$union[]): void;
     GetUnitColumn(): CompositeCell_$union[];
@@ -42,12 +42,12 @@ export declare class DataMap {
     GetDescriptionColumn(): CompositeCell_$union[];
     SetDescriptionColumn(cells: CompositeCell_$union[]): void;
     GetDataContext<$b>(row: int32, SkipValidation?: Option<$b>): DataContext;
-    static getDataContext<$a>(row: int32, SkipValidation?: Option<$a>): ((arg0: DataMap) => DataContext);
-    Copy(): DataMap;
+    static getDataContext<$a>(row: int32, SkipValidation?: Option<$a>): ((arg0: Datamap) => DataContext);
+    Copy(): Datamap;
     Equals(obj: any): boolean;
     GetHashCode(): int32;
     static get FileName(): string;
 }
-export declare function DataMap_$reflection(): TypeInfo;
-export declare function DataMap_$ctor_4E3220A7(dataContexts: DataContext[]): DataMap;
-//# sourceMappingURL=DataMap.d.ts.map
+export declare function Datamap_$reflection(): TypeInfo;
+export declare function Datamap_$ctor_4E3220A7(dataContexts: DataContext[]): Datamap;
+//# sourceMappingURL=Datamap.d.ts.map

package/dist/ts/ts/Core/{DataMap.d.ts.map → Datamap.d.ts.map}

@@ -1 +1 @@
-{"version":3,"file":"DataMap.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/DataMap.ts"],"names":[],"mappings":"AAAA,OAAO,EAAuD,sBAAsB,EAAsC,MAAM,4BAA4B,CAAC;AAC7J,OAAO,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAC7D,OAAO,EAAE,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAE1E,OAAO,EAAoB,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACjF,OAAO,EAA0B,oBAAoB,EAAqC,MAAM,0BAA0B,CAAC;AAC3H,OAAO,EAAyR,WAAW,EAAE,MAAM,kBAAkB,CAAC;AACtU,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAE7D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,eAAO,MAAM,qBAAqB,EAAE,sBAA6D,CAAC;AAElG,eAAO,MAAM,sBAAsB,EAAE,kBAAkH,CAAC;AAExJ,eAAO,MAAM,4BAA4B,EAAE,sBAA0E,CAAC;AAEtH,eAAO,MAAM,eAAe,EAAE,kBAAsG,CAAC;AAErI,eAAO,MAAM,qBAAqB,EAAE,sBAAmE,CAAC;AAExG,eAAO,MAAM,qBAAqB,EAAE,kBAA8G,CAAC;AAEnJ,eAAO,MAAM,2BAA2B,EAAE,sBAAyE,CAAC;AAEpH,eAAO,MAAM,sBAAsB,EAAE,sBAA0D,CAAC;AAEhG,eAAO,MAAM,4BAA4B,EAAE,sBAAgE,CAAC;AAE5G,eAAO,MAAM,4BAA4B,EAAE,sBAAiE,CAAC;AAE7G,eAAO,MAAM,yBAAyB,EAAE,UAAU,CAAC,sBAAsB,CAAkL,CAAC;AAE5P,wBAAgB,4BAA4B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,KAAK,MAAM,CAAC,kBAAkB,CAAC,CAAC,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,oBAAoB,EAAE,CAWxJ;AAED,wBAAgB,0BAA0B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,KAAK,MAAM,CAAC,MAAM,CAAC,CAAC,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,oBAAoB,EAAE,CAW1I;AAED,wBAAgB,4BAA4B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,MAAM,CAAC,kBAAkB,CAAC,KAAK,IAAI,CAAC,EAAE,MAAM,EAAE,oBAAoB,EAAE,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAOlL;AAED,wBAAgB,0BAA0B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,KAAK,IAAI,CAAC,EAAE,MAAM,EAAE,oBAAoB,EAAE,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAOpK;AAED,wBAAgB,4CAA4C,CAAC,GAAG,EAAE,KAAK,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAO1G;AAED,wBAAgB,yCAAyC,CAAC,SAAS,EAAE,oBAAoB,EAAE,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAI9H;AAED,qBAAa,OAAO;IAChB,UAAU,EAAE,KAAK,CAAC;IAClB,kBAAkB,EAAE,WAAW,EAAE,CAAC;gBACtB,YAAY,EAAE,WAAW,EAAE;IAIvC,IAAI,UAAU,IAAI,KAAK,CAGtB;IACD,IAAI,UAAU,CAAC,KAAK,EAAE,KAAK,EAG1B;IACD,IAAI,YAAY,IAAI,WAAW,EAAE,CAGhC;IACD,MAAM,CAAC,IAAI,IAAI,OAAO;IAGtB,oBAAoB,IAAI,oBAAoB,EAAE;IAI9C,oBAAoB,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMzD,aAAa,IAAI,oBAAoB,EAAE;IAIvC,aAAa,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMlD,mBAAmB,IAAI,oBAAoB,EAAE;IAI7C,iBAAiB,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMtD,cAAc,IAAI,oBAAoB,EAAE;IAIxC,cAAc,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMnD,oBAAoB,IAAI,oBAAoB,EAAE;IAI9C,oBAAoB,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMzD,cAAc,CAAC,EAAE,EAAE,GAAG,EAAE,KAAK,EAAE,cAAc,CAAC,EAAE,MAAM,CAAC,EAAE,CAAC,GAAG,WAAW;IAKxE,MAAM,CAAC,cAAc,CAAC,EAAE,EAAE,GAAG,EAAE,KAAK,EAAE,cAAc,CAAC,EAAE,MAAM,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,WAAW,CAAC;IAGpG,IAAI,IAAI,OAAO;IAKf,MAAM,CAAC,GAAG,EAAE,GAAG,GAAG,OAAO;IAIzB,WAAW,IAAI,KAAK;IAIpB,MAAM,KAAK,QAAQ,IAAI,MAAM,CAE5B;CACJ;AAED,wBAAgB,mBAAmB,IAAI,QAAQ,CAE9C;AAED,wBAAgB,sBAAsB,CAAC,YAAY,EAAE,WAAW,EAAE,GAAG,OAAO,CAE3E"}
+{"version":3,"file":"Datamap.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/Core/Datamap.ts"],"names":[],"mappings":"AAAA,OAAO,EAAuD,sBAAsB,EAAsC,MAAM,4BAA4B,CAAC;AAC7J,OAAO,EAAE,kBAAkB,EAAE,MAAM,yBAAyB,CAAC;AAC7D,OAAO,EAAE,UAAU,EAAW,MAAM,qCAAqC,CAAC;AAE1E,OAAO,EAAoB,MAAM,EAAE,MAAM,uCAAuC,CAAC;AACjF,OAAO,EAA0B,oBAAoB,EAAqC,MAAM,0BAA0B,CAAC;AAC3H,OAAO,EAAyR,WAAW,EAAE,MAAM,kBAAkB,CAAC;AACtU,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAE7D,OAAO,EAAc,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAEjF,eAAO,MAAM,qBAAqB,EAAE,sBAA6D,CAAC;AAElG,eAAO,MAAM,sBAAsB,EAAE,kBAAkH,CAAC;AAExJ,eAAO,MAAM,4BAA4B,EAAE,sBAA0E,CAAC;AAEtH,eAAO,MAAM,eAAe,EAAE,kBAAsG,CAAC;AAErI,eAAO,MAAM,qBAAqB,EAAE,sBAAmE,CAAC;AAExG,eAAO,MAAM,qBAAqB,EAAE,kBAA8G,CAAC;AAEnJ,eAAO,MAAM,2BAA2B,EAAE,sBAAyE,CAAC;AAEpH,eAAO,MAAM,sBAAsB,EAAE,sBAA0D,CAAC;AAEhG,eAAO,MAAM,4BAA4B,EAAE,sBAAgE,CAAC;AAE5G,eAAO,MAAM,4BAA4B,EAAE,sBAAiE,CAAC;AAE7G,eAAO,MAAM,yBAAyB,EAAE,UAAU,CAAC,sBAAsB,CAAkL,CAAC;AAE5P,wBAAgB,4BAA4B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,KAAK,MAAM,CAAC,kBAAkB,CAAC,CAAC,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,oBAAoB,EAAE,CAWxJ;AAED,wBAAgB,0BAA0B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,KAAK,MAAM,CAAC,MAAM,CAAC,CAAC,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,oBAAoB,EAAE,CAW1I;AAED,wBAAgB,4BAA4B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,MAAM,CAAC,kBAAkB,CAAC,KAAK,IAAI,CAAC,EAAE,MAAM,EAAE,oBAAoB,EAAE,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAOlL;AAED,wBAAgB,0BAA0B,CAAC,CAAC,EAAE,CAAC,CAAC,IAAI,EAAE,WAAW,EAAE,IAAI,EAAE,MAAM,CAAC,MAAM,CAAC,KAAK,IAAI,CAAC,EAAE,MAAM,EAAE,oBAAoB,EAAE,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAOpK;AAED,wBAAgB,4CAA4C,CAAC,GAAG,EAAE,KAAK,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAO1G;AAED,wBAAgB,yCAAyC,CAAC,SAAS,EAAE,oBAAoB,EAAE,EAAE,YAAY,EAAE,WAAW,EAAE,GAAG,IAAI,CAI9H;AAED,qBAAa,OAAO;IAChB,UAAU,EAAE,KAAK,CAAC;IAClB,kBAAkB,EAAE,WAAW,EAAE,CAAC;gBACtB,YAAY,EAAE,WAAW,EAAE;IAIvC,IAAI,UAAU,IAAI,KAAK,CAGtB;IACD,IAAI,UAAU,CAAC,KAAK,EAAE,KAAK,EAG1B;IACD,IAAI,YAAY,IAAI,WAAW,EAAE,CAGhC;IACD,MAAM,CAAC,IAAI,IAAI,OAAO;IAGtB,oBAAoB,IAAI,oBAAoB,EAAE;IAI9C,oBAAoB,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMzD,aAAa,IAAI,oBAAoB,EAAE;IAIvC,aAAa,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMlD,mBAAmB,IAAI,oBAAoB,EAAE;IAI7C,iBAAiB,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMtD,cAAc,IAAI,oBAAoB,EAAE;IAIxC,cAAc,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMnD,oBAAoB,IAAI,oBAAoB,EAAE;IAI9C,oBAAoB,CAAC,KAAK,EAAE,oBAAoB,EAAE,GAAG,IAAI;IAMzD,cAAc,CAAC,EAAE,EAAE,GAAG,EAAE,KAAK,EAAE,cAAc,CAAC,EAAE,MAAM,CAAC,EAAE,CAAC,GAAG,WAAW;IAKxE,MAAM,CAAC,cAAc,CAAC,EAAE,EAAE,GAAG,EAAE,KAAK,EAAE,cAAc,CAAC,EAAE,MAAM,CAAC,EAAE,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,OAAO,KAAK,WAAW,CAAC;IAGpG,IAAI,IAAI,OAAO;IAKf,MAAM,CAAC,GAAG,EAAE,GAAG,GAAG,OAAO;IAIzB,WAAW,IAAI,KAAK;IAIpB,MAAM,KAAK,QAAQ,IAAI,MAAM,CAE5B;CACJ;AAED,wBAAgB,mBAAmB,IAAI,QAAQ,CAE9C;AAED,wBAAgB,sBAAsB,CAAC,YAAY,EAAE,WAAW,EAAE,GAAG,OAAO,CAE3E"}

package/dist/ts/ts/Core/{DataMap.js → Datamap.js}

@@ -8,18 +8,18 @@ import { DataContext__get_Explication, DataContext__set_Explication_279AAFF2, Da
 import { hash, boxHashSeq } from './Helper/HashCodes.js';
 import { class_type } from '../../node_modules/@fable-org/fable-library-js/Reflection.js';
 
-const DataMapAux_dataHeader = CompositeHeader_Input(IOType_Data());
-const DataMapAux_explication = new OntologyAnnotation("Clarification", "NCIT", "http://purl.obolibrary.org/obo/NCIT_C94778");
-const DataMapAux_explicationHeader = CompositeHeader_Parameter(DataMapAux_explication);
-const DataMapAux_unit = new OntologyAnnotation("Unit", "UO", "http://purl.obolibrary.org/obo/UO_0000000");
-const DataMapAux_unitHeader = CompositeHeader_Parameter(DataMapAux_unit);
-const DataMapAux_objectType = new OntologyAnnotation("Data Type", "NCIT", "http://purl.obolibrary.org/obo/NCIT_C42645");
-const DataMapAux_objectTypeHeader = CompositeHeader_Parameter(DataMapAux_objectType);
-const DataMapAux_labelHeader = CompositeHeader_FreeText("Label");
-const DataMapAux_descriptionHeader = CompositeHeader_FreeText("Description");
-const DataMapAux_generatedByHeader = CompositeHeader_FreeText("Generated By");
-const DataMapAux_allowedHeaders = ofArray([DataMapAux_dataHeader, DataMapAux_explicationHeader, DataMapAux_unitHeader, DataMapAux_objectTypeHeader, DataMapAux_descriptionHeader, DataMapAux_generatedByHeader]);
-function DataMapAux_getOntologyColumn(f, dataContexts) {
+const DatamapAux_dataHeader = CompositeHeader_Input(IOType_Data());
+const DatamapAux_explication = new OntologyAnnotation("Clarification", "NCIT", "http://purl.obolibrary.org/obo/NCIT_C94778");
+const DatamapAux_explicationHeader = CompositeHeader_Parameter(DatamapAux_explication);
+const DatamapAux_unit = new OntologyAnnotation("Unit", "UO", "http://purl.obolibrary.org/obo/UO_0000000");
+const DatamapAux_unitHeader = CompositeHeader_Parameter(DatamapAux_unit);
+const DatamapAux_objectType = new OntologyAnnotation("Data Type", "NCIT", "http://purl.obolibrary.org/obo/NCIT_C42645");
+const DatamapAux_objectTypeHeader = CompositeHeader_Parameter(DatamapAux_objectType);
+const DatamapAux_labelHeader = CompositeHeader_FreeText("Label");
+const DatamapAux_descriptionHeader = CompositeHeader_FreeText("Description");
+const DatamapAux_generatedByHeader = CompositeHeader_FreeText("Generated By");
+const DatamapAux_allowedHeaders = ofArray([DatamapAux_dataHeader, DatamapAux_explicationHeader, DatamapAux_unitHeader, DatamapAux_objectTypeHeader, DatamapAux_descriptionHeader, DatamapAux_generatedByHeader]);
+function DatamapAux_getOntologyColumn(f, dataContexts) {
   const collection = map((dc) => {
     const matchValue = f(dc);
     if (matchValue == null) {
@@ -30,7 +30,7 @@ function DataMapAux_getOntologyColumn(f, dataContexts) {
   }, dataContexts);
   return Array.from(collection);
 }
-function DataMapAux_getStringColumn(f, dataContexts) {
+function DatamapAux_getStringColumn(f, dataContexts) {
   const collection = map((dc) => {
     const matchValue = f(dc);
     if (matchValue == null) {
@@ -41,7 +41,7 @@ function DataMapAux_getStringColumn(f, dataContexts) {
   }, dataContexts);
   return Array.from(collection);
 }
-function DataMapAux_setOntologyColumn(f, column, dataContexts) {
+function DatamapAux_setOntologyColumn(f, column, dataContexts) {
   iterateIndexed((i, cell) => {
     if (cell.tag === /* Term */
     0) {
@@ -50,7 +50,7 @@ function DataMapAux_setOntologyColumn(f, column, dataContexts) {
     }
   }, column);
 }
-function DataMapAux_setStringColumn(f, column, dataContexts) {
+function DatamapAux_setStringColumn(f, column, dataContexts) {
   iterateIndexed((i, cell) => {
     if (cell.tag === /* FreeText */
     1) {
@@ -59,7 +59,7 @@ function DataMapAux_setStringColumn(f, column, dataContexts) {
     }
   }, column);
 }
-function DataMapAux_SanityChecks_rowIndexInBoundaries(row, dataContexts) {
+function DatamapAux_SanityChecks_rowIndexInBoundaries(row, dataContexts) {
   if (row < 0) {
     throw new Error("Row index must be greater or equal to 0.");
   }
@@ -67,12 +67,12 @@ function DataMapAux_SanityChecks_rowIndexInBoundaries(row, dataContexts) {
     throw new Error("Row index must be less than the number of rows.");
   }
 }
-function DataMapAux_SanityChecks_lengthOfNewColumn(newColumn, dataContexts) {
+function DatamapAux_SanityChecks_lengthOfNewColumn(newColumn, dataContexts) {
   if (newColumn.length !== dataContexts.length) {
     throw new Error("Length of new column does not match length of data contexts.");
   }
 }
-class DataMap {
+class Datamap {
   constructor(dataContexts) {
     this.staticHash = 0;
     this["dataContexts@108"] = dataContexts;
@@ -90,61 +90,61 @@ class DataMap {
     return this$["dataContexts@108"];
   }
   static init() {
-    return new DataMap([]);
+    return new Datamap([]);
   }
   GetExplicationColumn() {
     const this$ = this;
-    return DataMapAux_getOntologyColumn(DataContext__get_Explication, this$["dataContexts@108"]);
+    return DatamapAux_getOntologyColumn(DataContext__get_Explication, this$["dataContexts@108"]);
   }
   SetExplicationColumn(cells) {
     const this$ = this;
-    DataMapAux_setOntologyColumn((dc, oa) => {
+    DatamapAux_setOntologyColumn((dc, oa) => {
       DataContext__set_Explication_279AAFF2(dc, oa);
     }, cells, this$["dataContexts@108"]);
   }
   GetUnitColumn() {
     const this$ = this;
-    return DataMapAux_getOntologyColumn(DataContext__get_Unit, this$["dataContexts@108"]);
+    return DatamapAux_getOntologyColumn(DataContext__get_Unit, this$["dataContexts@108"]);
   }
   SetUnitColumn(cells) {
     const this$ = this;
-    DataMapAux_setOntologyColumn((dc, oa) => {
+    DatamapAux_setOntologyColumn((dc, oa) => {
       DataContext__set_Unit_279AAFF2(dc, oa);
     }, cells, this$["dataContexts@108"]);
   }
   GetObjectTypeColumn() {
     const this$ = this;
-    return DataMapAux_getOntologyColumn(DataContext__get_ObjectType, this$["dataContexts@108"]);
+    return DatamapAux_getOntologyColumn(DataContext__get_ObjectType, this$["dataContexts@108"]);
   }
   SetDataTypeColumn(cells) {
     const this$ = this;
-    DataMapAux_setOntologyColumn((dc, oa) => {
+    DatamapAux_setOntologyColumn((dc, oa) => {
       DataContext__set_ObjectType_279AAFF2(dc, oa);
     }, cells, this$["dataContexts@108"]);
   }
   GetLabelColumn() {
     const this$ = this;
-    return DataMapAux_getStringColumn((dc) => dc.Name, this$["dataContexts@108"]);
+    return DatamapAux_getStringColumn((dc) => dc.Name, this$["dataContexts@108"]);
   }
   SetLabelColumn(cells) {
     const this$ = this;
-    DataMapAux_setStringColumn((dc, s) => {
+    DatamapAux_setStringColumn((dc, s) => {
       dc.Name = s;
     }, cells, this$["dataContexts@108"]);
   }
   GetDescriptionColumn() {
     const this$ = this;
-    return DataMapAux_getStringColumn(DataContext__get_Description, this$["dataContexts@108"]);
+    return DatamapAux_getStringColumn(DataContext__get_Description, this$["dataContexts@108"]);
   }
   SetDescriptionColumn(cells) {
     const this$ = this;
-    DataMapAux_setStringColumn((dc, s) => {
+    DatamapAux_setStringColumn((dc, s) => {
       DataContext__set_Description_6DFDD678(dc, s);
     }, cells, this$["dataContexts@108"]);
   }
   GetDataContext(row, SkipValidation) {
     const this$ = this;
-    DataMapAux_SanityChecks_rowIndexInBoundaries(row, this$["dataContexts@108"]);
+    DatamapAux_SanityChecks_rowIndexInBoundaries(row, this$["dataContexts@108"]);
     return this$["dataContexts@108"][row];
   }
   static getDataContext(row, SkipValidation) {
@@ -153,7 +153,7 @@ class DataMap {
   Copy() {
     let collection;
     const this$ = this;
-    return new DataMap((collection = map(DataContext__Copy, this$["dataContexts@108"]), Array.from(collection)));
+    return new Datamap((collection = map(DataContext__Copy, this$["dataContexts@108"]), Array.from(collection)));
   }
   Equals(obj) {
     const this$ = this;
@@ -167,11 +167,11 @@ class DataMap {
     return "isa.datamap.xlsx";
   }
 }
-function DataMap_$reflection() {
-  return class_type("ARCtrl.DataMap", void 0, DataMap);
+function Datamap_$reflection() {
+  return class_type("ARCtrl.Datamap", void 0, Datamap);
 }
-function DataMap_$ctor_4E3220A7(dataContexts) {
-  return new DataMap(dataContexts);
+function Datamap_$ctor_4E3220A7(dataContexts) {
+  return new Datamap(dataContexts);
 }
 
-export { DataMap, DataMapAux_SanityChecks_lengthOfNewColumn, DataMapAux_SanityChecks_rowIndexInBoundaries, DataMapAux_allowedHeaders, DataMapAux_dataHeader, DataMapAux_descriptionHeader, DataMapAux_explication, DataMapAux_explicationHeader, DataMapAux_generatedByHeader, DataMapAux_getOntologyColumn, DataMapAux_getStringColumn, DataMapAux_labelHeader, DataMapAux_objectType, DataMapAux_objectTypeHeader, DataMapAux_setOntologyColumn, DataMapAux_setStringColumn, DataMapAux_unit, DataMapAux_unitHeader, DataMap_$ctor_4E3220A7, DataMap_$reflection };
+export { Datamap, DatamapAux_SanityChecks_lengthOfNewColumn, DatamapAux_SanityChecks_rowIndexInBoundaries, DatamapAux_allowedHeaders, DatamapAux_dataHeader, DatamapAux_descriptionHeader, DatamapAux_explication, DatamapAux_explicationHeader, DatamapAux_generatedByHeader, DatamapAux_getOntologyColumn, DatamapAux_getStringColumn, DatamapAux_labelHeader, DatamapAux_objectType, DatamapAux_objectTypeHeader, DatamapAux_setOntologyColumn, DatamapAux_setStringColumn, DatamapAux_unit, DatamapAux_unitHeader, Datamap_$ctor_4E3220A7, Datamap_$reflection };

package/dist/ts/ts/Core/Helper/Identifier.d.ts

@@ -80,6 +80,14 @@ export declare function Workflow_fileNameFromIdentifier(identifier: string): str
  * On writing a xlsx file we unify our output to a relative path to ARC root. So: `workflows/workflowIdentifier/isa.workflow.xlsx`.
  */
 export declare function Workflow_tryFileNameFromIdentifier(identifier: string): Option<string>;
+/**
+ * On writing a cwl file we unify our output to a relative path to ARC root. So: `workflows/workflowIdentifier/workflow.cwl`.
+ */
+export declare function Workflow_cwlFileNameFromIdentifier(identifier: string): string;
+/**
+ * On writing a cwl file we unify our output to a relative path to ARC root. So: `workflows/workflowIdentifier/workflow.cwl`.
+ */
+export declare function Workflow_tryCwlFileNameFromIdentifier(identifier: string): Option<string>;
 /**
  * On writing a xlsx file we unify our output to a relative path to ARC root. So: `workflows/workflowIdentifier/isa.datamap.xlsx`.
  */
@@ -108,6 +116,22 @@ export declare function Run_fileNameFromIdentifier(identifier: string): string;
  * On writing a xlsx file we unify our output to a relative path to ARC root. So: `runs/runIdentifier/isa.run.xlsx`.
  */
 export declare function Run_tryFileNameFromIdentifier(identifier: string): Option<string>;
+/**
+ * On writing a cwl file we unify our output to a relative path to ARC root. So: `runs/runIdentifier/run.cwl`.
+ */
+export declare function Run_cwlFileNameFromIdentifier(identifier: string): string;
+/**
+ * On writing a cwl file we unify our output to a relative path to ARC root. So: `runs/runIdentifier/run.cwl`.
+ */
+export declare function Run_tryCwlFileNameFromIdentifier(identifier: string): Option<string>;
+/**
+ * On writing a yml file we unify our output to a relative path to ARC root. So: `runs/runIdentifier/run.yml`.
+ */
+export declare function Run_ymlFileNameFromIdentifier(identifier: string): string;
+/**
+ * On writing a yml file we unify our output to a relative path to ARC root. So: `runs/runIdentifier/run.yml`.
+ */
+export declare function Run_tryYmlFileNameFromIdentifier(identifier: string): Option<string>;
 /**
  * On writing a xlsx file we unify our output to a relative path to ARC root. So: `runs/runIdentifier/isa.datamap.xlsx`.
  */

package/dist/ts/ts/Core/Helper/Identifier.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"Identifier.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Core/Helper/Identifier.ts"],"names":[],"mappings":"AAEA,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAGtE,wBAAgB,uBAAuB,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAOnE;AAED,wBAAgB,oBAAoB,CAAC,UAAU,EAAE,MAAM,GAAG,IAAI,CAM7D;AAED,wBAAgB,uBAAuB,IAAI,MAAM,CAGhD;AAED,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAExD;AAED,wBAAgB,uBAAuB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAO3D;AAED;;;;GAIG;AACH,wBAAgB,4BAA4B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASrE;AAED;;;;GAIG;AACH,wBAAgB,+BAA+B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAShF;AAED;;GAEG;AACH,wBAAgB,4BAA4B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGvE;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOlF;AAED;;GAEG;AACH,wBAAgB,mCAAmC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG9E;AAED;;GAEG;AACH,wBAAgB,sCAAsC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOzF;AAED;;;;GAIG;AACH,wBAAgB,4BAA4B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASrE;AAED;;;;GAIG;AACH,wBAAgB,+BAA+B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAShF;AAED;;GAEG;AACH,wBAAgB,4BAA4B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGvE;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOlF;AAED;;GAEG;AACH,wBAAgB,mCAAmC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG9E;AAED;;GAEG;AACH,wBAAgB,sCAAsC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOzF;AAED;;;;GAIG;AACH,wBAAgB,+BAA+B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASxE;AAED;;;;GAIG;AACH,wBAAgB,kCAAkC,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CASnF;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG1E;AAED;;GAEG;AACH,wBAAgB,kCAAkC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOrF;AAED;;GAEG;AACH,wBAAgB,sCAAsC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGjF;AAED;;GAEG;AACH,wBAAgB,yCAAyC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAO5F;AAED;;;;GAIG;AACH,wBAAgB,0BAA0B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASnE;AAED;;;;GAIG;AACH,wBAAgB,6BAA6B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAS9E;AAED;;GAEG;AACH,wBAAgB,0BAA0B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGrE;AAED;;GAEG;AACH,wBAAgB,6BAA6B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOhF;AAED;;GAEG;AACH,wBAAgB,iCAAiC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG5E;AAED;;GAEG;AACH,wBAAgB,oCAAoC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOvF"}
+{"version":3,"file":"Identifier.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Core/Helper/Identifier.ts"],"names":[],"mappings":"AAEA,OAAO,EAAS,MAAM,EAAE,MAAM,uCAAuC,CAAC;AAGtE,wBAAgB,uBAAuB,CAAC,UAAU,EAAE,MAAM,GAAG,OAAO,CAOnE;AAED,wBAAgB,oBAAoB,CAAC,UAAU,EAAE,MAAM,GAAG,IAAI,CAM7D;AAED,wBAAgB,uBAAuB,IAAI,MAAM,CAGhD;AAED,wBAAgB,mBAAmB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAExD;AAED,wBAAgB,uBAAuB,CAAC,GAAG,EAAE,MAAM,GAAG,MAAM,CAO3D;AAED;;;;GAIG;AACH,wBAAgB,4BAA4B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASrE;AAED;;;;GAIG;AACH,wBAAgB,+BAA+B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAShF;AAED;;GAEG;AACH,wBAAgB,4BAA4B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGvE;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOlF;AAED;;GAEG;AACH,wBAAgB,mCAAmC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG9E;AAED;;GAEG;AACH,wBAAgB,sCAAsC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOzF;AAED;;;;GAIG;AACH,wBAAgB,4BAA4B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASrE;AAED;;;;GAIG;AACH,wBAAgB,+BAA+B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAShF;AAED;;GAEG;AACH,wBAAgB,4BAA4B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGvE;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOlF;AAED;;GAEG;AACH,wBAAgB,mCAAmC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG9E;AAED;;GAEG;AACH,wBAAgB,sCAAsC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOzF;AAED;;;;GAIG;AACH,wBAAgB,+BAA+B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASxE;AAED;;;;GAIG;AACH,wBAAgB,kCAAkC,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CASnF;AAED;;GAEG;AACH,wBAAgB,+BAA+B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG1E;AAED;;GAEG;AACH,wBAAgB,kCAAkC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOrF;AAED;;GAEG;AACH,wBAAgB,kCAAkC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG7E;AAED;;GAEG;AACH,wBAAgB,qCAAqC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOxF;AAED;;GAEG;AACH,wBAAgB,sCAAsC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGjF;AAED;;GAEG;AACH,wBAAgB,yCAAyC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAO5F;AAED;;;;GAIG;AACH,wBAAgB,0BAA0B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CASnE;AAED;;;;GAIG;AACH,wBAAgB,6BAA6B,CAAC,QAAQ,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAS9E;AAED;;GAEG;AACH,wBAAgB,0BAA0B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGrE;AAED;;GAEG;AACH,wBAAgB,6BAA6B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOhF;AAED;;GAEG;AACH,wBAAgB,6BAA6B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGxE;AAED;;GAEG;AACH,wBAAgB,gCAAgC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOnF;AAED;;GAEG;AACH,wBAAgB,6BAA6B,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAGxE;AAED;;GAEG;AACH,wBAAgB,gCAAgC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOnF;AAED;;GAEG;AACH,wBAAgB,iCAAiC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAG5E;AAED;;GAEG;AACH,wBAAgB,oCAAoC,CAAC,UAAU,EAAE,MAAM,GAAG,MAAM,CAAC,MAAM,CAAC,CAOvF"}

package/dist/ts/ts/Core/Helper/Identifier.js

@@ -139,6 +139,17 @@ function Workflow_tryFileNameFromIdentifier(identifier) {
     return void 0;
   }
 }
+function Workflow_cwlFileNameFromIdentifier(identifier) {
+  checkValidCharacters(identifier);
+  return combineMany(["workflows", identifier, "workflow.cwl"]);
+}
+function Workflow_tryCwlFileNameFromIdentifier(identifier) {
+  if (tryCheckValidCharacters(identifier)) {
+    return combineMany(["workflows", identifier, "workflow.cwl"]);
+  } else {
+    return void 0;
+  }
+}
 function Workflow_datamapFileNameFromIdentifier(identifier) {
   checkValidCharacters(identifier);
   return combineMany(["workflows", identifier, "isa.datamap.xlsx"]);
@@ -179,6 +190,28 @@ function Run_tryFileNameFromIdentifier(identifier) {
     return void 0;
   }
 }
+function Run_cwlFileNameFromIdentifier(identifier) {
+  checkValidCharacters(identifier);
+  return combineMany(["runs", identifier, "run.cwl"]);
+}
+function Run_tryCwlFileNameFromIdentifier(identifier) {
+  if (tryCheckValidCharacters(identifier)) {
+    return combineMany(["runs", identifier, "run.cwl"]);
+  } else {
+    return void 0;
+  }
+}
+function Run_ymlFileNameFromIdentifier(identifier) {
+  checkValidCharacters(identifier);
+  return combineMany(["runs", identifier, "run.yml"]);
+}
+function Run_tryYmlFileNameFromIdentifier(identifier) {
+  if (tryCheckValidCharacters(identifier)) {
+    return combineMany(["runs", identifier, "run.yml"]);
+  } else {
+    return void 0;
+  }
+}
 function Run_datamapFileNameFromIdentifier(identifier) {
   checkValidCharacters(identifier);
   return combineMany(["runs", identifier, "isa.datamap.xlsx"]);
@@ -191,4 +224,4 @@ function Run_tryDatamapFileNameFromIdentifier(identifier) {
   }
 }
 
-export { Assay_datamapFileNameFromIdentifier, Assay_fileNameFromIdentifier, Assay_identifierFromFileName, Assay_tryDatamapFileNameFromIdentifier, Assay_tryFileNameFromIdentifier, Assay_tryIdentifierFromFileName, Run_datamapFileNameFromIdentifier, Run_fileNameFromIdentifier, Run_identifierFromFileName, Run_tryDatamapFileNameFromIdentifier, Run_tryFileNameFromIdentifier, Run_tryIdentifierFromFileName, Study_datamapFileNameFromIdentifier, Study_fileNameFromIdentifier, Study_identifierFromFileName, Study_tryDatamapFileNameFromIdentifier, Study_tryFileNameFromIdentifier, Study_tryIdentifierFromFileName, Workflow_datamapFileNameFromIdentifier, Workflow_fileNameFromIdentifier, Workflow_identifierFromFileName, Workflow_tryDatamapFileNameFromIdentifier, Workflow_tryFileNameFromIdentifier, Workflow_tryIdentifierFromFileName, checkValidCharacters, createMissingIdentifier, isMissingIdentifier, removeMissingIdentifier, tryCheckValidCharacters };
+export { Assay_datamapFileNameFromIdentifier, Assay_fileNameFromIdentifier, Assay_identifierFromFileName, Assay_tryDatamapFileNameFromIdentifier, Assay_tryFileNameFromIdentifier, Assay_tryIdentifierFromFileName, Run_cwlFileNameFromIdentifier, Run_datamapFileNameFromIdentifier, Run_fileNameFromIdentifier, Run_identifierFromFileName, Run_tryCwlFileNameFromIdentifier, Run_tryDatamapFileNameFromIdentifier, Run_tryFileNameFromIdentifier, Run_tryIdentifierFromFileName, Run_tryYmlFileNameFromIdentifier, Run_ymlFileNameFromIdentifier, Study_datamapFileNameFromIdentifier, Study_fileNameFromIdentifier, Study_identifierFromFileName, Study_tryDatamapFileNameFromIdentifier, Study_tryFileNameFromIdentifier, Study_tryIdentifierFromFileName, Workflow_cwlFileNameFromIdentifier, Workflow_datamapFileNameFromIdentifier, Workflow_fileNameFromIdentifier, Workflow_identifierFromFileName, Workflow_tryCwlFileNameFromIdentifier, Workflow_tryDatamapFileNameFromIdentifier, Workflow_tryFileNameFromIdentifier, Workflow_tryIdentifierFromFileName, checkValidCharacters, createMissingIdentifier, isMissingIdentifier, removeMissingIdentifier, tryCheckValidCharacters };

package/dist/ts/ts/FileSystem/FileSystemTree.d.ts

@@ -41,10 +41,10 @@ export declare class FileSystemTree<Tag extends keyof FileSystemTree_$cases> ext
     static createGitKeepFile(): FileSystemTree_$union;
     static createReadmeFile(): FileSystemTree_$union;
     static createEmptyFolder(name: string): FileSystemTree_$union;
-    static createAssayFolder(assayName: string, hasDataMap?: boolean): FileSystemTree_$union;
-    static createStudyFolder(studyName: string, hasDataMap?: boolean): FileSystemTree_$union;
-    static createWorkflowFolder(workflowName: string, hasDataMap?: boolean): FileSystemTree_$union;
-    static createRunFolder(runName: string, hasDataMap?: boolean): FileSystemTree_$union;
+    static createAssayFolder(assayName: string, hasDatamap?: boolean): FileSystemTree_$union;
+    static createStudyFolder(studyName: string, hasDatamap?: boolean): FileSystemTree_$union;
+    static createWorkflowFolder(workflowName: string, hasCWL?: boolean, hasDatamap?: boolean): FileSystemTree_$union;
+    static createRunFolder(runName: string, hasCWL?: boolean, hasYML?: boolean, hasDatamap?: boolean): FileSystemTree_$union;
     static createInvestigationFile(): FileSystemTree_$union;
     static createLicenseFile(): FileSystemTree_$union;
     static createAssaysFolder(assays: FileSystemTree_$union[]): FileSystemTree_$union;

package/dist/ts/ts/FileSystem/FileSystemTree.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"FileSystemTree.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/FileSystemTree.ts"],"names":[],"mappings":"AAAA,OAAO,EAAU,MAAM,EAAc,MAAM,uCAAuC,CAAC;AAQnF,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAuC,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAE1G,MAAM,MAAM,qBAAqB,GAC3B,cAAc,CAAC,CAAC,CAAC,GACjB,cAAc,CAAC,CAAC,CAAC,CAAA;AAEvB,MAAM,MAAM,qBAAqB,GAAG;IAChC,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,MAAM,CAAC,CAAC,CAAC;IACtB,CAAC,EAAE,CAAC,QAAQ,EAAE,CAAC,MAAM,EAAE,qBAAqB,EAAE,CAAC,CAAC,CAAA;CACnD,CAAA;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,qBAE/C;AAED,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,qBAAqB,EAAE,qBAEpF;AAED,qBAAa,cAAc,CAAC,GAAG,SAAS,MAAM,qBAAqB,CAAE,SAAQ,KAAK,CAAC,GAAG,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;IACtG,QAAQ,CAAC,GAAG,EAAE,GAAG;IAAE,QAAQ,CAAC,MAAM,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;gBAAxD,GAAG,EAAE,GAAG,EAAW,MAAM,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;IAG7E,KAAK;IAGL,IAAI,IAAI,IAAI,MAAM,CAUjB;IACD,IAAI,QAAQ,IAAI,OAAO,CAGtB;IACD,IAAI,MAAM,IAAI,OAAO,CAGpB;IACD,MAAM,KAAK,SAAS,IAAI,MAAM,CAE7B;IACD,MAAM,CAAC,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAGtD,MAAM,CAAC,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAG5F,MAAM,CAAC,gBAAgB,CAAC,QAAQ,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGjF,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAI9D,MAAM,CAAC,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAGxG,qBAAqB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO;IAU5C,MAAM,CAAC,qBAAqB,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,OAAO,CAAC;IAGtF,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAmCvD,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAM5C,MAAM,CAAC,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,qBAAqB,CAAC;IAGtF,MAAM,CAAC,aAAa,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,qBAAqB;IA0B5D,WAAW,CAAC,UAAU,CAAC,EAAE,OAAO,GAAG,MAAM,EAAE;IAgC3C,MAAM,CAAC,WAAW,CAAC,UAAU,CAAC,EAAE,OAAO,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,EAAE,CAAC;IAGrF,WAAW,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAkBlF,MAAM,CAAC,WAAW,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAG5H,aAAa,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAmBpF,MAAM,CAAC,aAAa,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAG9H,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IA+B7E,MAAM,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAGvH,KAAK,CAAC,QAAQ,EAAE,qBAAqB,GAAG,qBAAqB;IAS7D,IAAI,IAAI,qBAAqB;IAI7B,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;IAGjD,MAAM,CAAC,gBAAgB,IAAI,qBAAqB;IAGhD,MAAM,CAAC,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAG7D,MAAM,CAAC,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAcxF,MAAM,CAAC,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAcxF,MAAM,CAAC,oBAAoB,CAAC,YAAY,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAY9F,MAAM,CAAC,eAAe,CAAC,OAAO,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAYpF,MAAM,CAAC,uBAAuB,IAAI,qBAAqB;IAGvD,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;IAGjD,MAAM,CAAC,kBAAkB,CAAC,MAAM,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGjF,MAAM,CAAC,mBAAmB,CAAC,OAAO,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGnF,MAAM,CAAC,qBAAqB,CAAC,SAAS,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGvF,MAAM,CAAC,gBAAgB,CAAC,IAAI,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;CAGhF;AAED,wBAAgB,0BAA0B,IAAI,QAAQ,CAErD"}
+{"version":3,"file":"FileSystemTree.d.ts","sourceRoot":"","sources":["../../../../src/ARCtrl/ts/FileSystem/FileSystemTree.ts"],"names":[],"mappings":"AAAA,OAAO,EAAU,MAAM,EAAc,MAAM,uCAAuC,CAAC;AAQnF,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAuC,QAAQ,EAAE,MAAM,2CAA2C,CAAC;AAE1G,MAAM,MAAM,qBAAqB,GAC3B,cAAc,CAAC,CAAC,CAAC,GACjB,cAAc,CAAC,CAAC,CAAC,CAAA;AAEvB,MAAM,MAAM,qBAAqB,GAAG;IAChC,CAAC,EAAE,CAAC,MAAM,EAAE,CAAC,MAAM,CAAC,CAAC,CAAC;IACtB,CAAC,EAAE,CAAC,QAAQ,EAAE,CAAC,MAAM,EAAE,qBAAqB,EAAE,CAAC,CAAC,CAAA;CACnD,CAAA;AAED,wBAAgB,mBAAmB,CAAC,IAAI,EAAE,MAAM,qBAE/C;AAED,wBAAgB,qBAAqB,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,EAAE,qBAAqB,EAAE,qBAEpF;AAED,qBAAa,cAAc,CAAC,GAAG,SAAS,MAAM,qBAAqB,CAAE,SAAQ,KAAK,CAAC,GAAG,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC,CAAC;IACtG,QAAQ,CAAC,GAAG,EAAE,GAAG;IAAE,QAAQ,CAAC,MAAM,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;gBAAxD,GAAG,EAAE,GAAG,EAAW,MAAM,EAAE,qBAAqB,CAAC,GAAG,CAAC,CAAC,CAAC,CAAC;IAG7E,KAAK;IAGL,IAAI,IAAI,IAAI,MAAM,CAUjB;IACD,IAAI,QAAQ,IAAI,OAAO,CAGtB;IACD,IAAI,MAAM,IAAI,OAAO,CAGpB;IACD,MAAM,KAAK,SAAS,IAAI,MAAM,CAE7B;IACD,MAAM,CAAC,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAGtD,MAAM,CAAC,YAAY,CAAC,IAAI,EAAE,MAAM,EAAE,QAAQ,CAAC,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAG5F,MAAM,CAAC,gBAAgB,CAAC,QAAQ,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGjF,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAI9D,MAAM,CAAC,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAGxG,qBAAqB,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO;IAU5C,MAAM,CAAC,qBAAqB,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,OAAO,CAAC;IAGtF,UAAU,CAAC,IAAI,EAAE,MAAM,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAmCvD,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAM5C,MAAM,CAAC,OAAO,CAAC,IAAI,EAAE,MAAM,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,qBAAqB,CAAC;IAGtF,MAAM,CAAC,aAAa,CAAC,KAAK,EAAE,MAAM,EAAE,GAAG,qBAAqB;IA0B5D,WAAW,CAAC,UAAU,CAAC,EAAE,OAAO,GAAG,MAAM,EAAE;IAgC3C,MAAM,CAAC,WAAW,CAAC,UAAU,CAAC,EAAE,OAAO,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,EAAE,CAAC;IAGrF,WAAW,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAkBlF,MAAM,CAAC,WAAW,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAG5H,aAAa,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IAmBpF,MAAM,CAAC,aAAa,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAG9H,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,MAAM,CAAC,qBAAqB,CAAC;IA+B7E,MAAM,CAAC,MAAM,CAAC,SAAS,EAAE,CAAC,CAAC,IAAI,EAAE,MAAM,KAAK,OAAO,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,qBAAqB,KAAK,MAAM,CAAC,qBAAqB,CAAC,CAAC;IAGvH,KAAK,CAAC,QAAQ,EAAE,qBAAqB,GAAG,qBAAqB;IAS7D,IAAI,IAAI,qBAAqB;IAI7B,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;IAGjD,MAAM,CAAC,gBAAgB,IAAI,qBAAqB;IAGhD,MAAM,CAAC,iBAAiB,CAAC,IAAI,EAAE,MAAM,GAAG,qBAAqB;IAG7D,MAAM,CAAC,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAcxF,MAAM,CAAC,iBAAiB,CAAC,SAAS,EAAE,MAAM,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAcxF,MAAM,CAAC,oBAAoB,CAAC,YAAY,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,OAAO,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAOhH,MAAM,CAAC,eAAe,CAAC,OAAO,EAAE,MAAM,EAAE,MAAM,CAAC,EAAE,OAAO,EAAE,MAAM,CAAC,EAAE,OAAO,EAAE,UAAU,CAAC,EAAE,OAAO,GAAG,qBAAqB;IAQxH,MAAM,CAAC,uBAAuB,IAAI,qBAAqB;IAGvD,MAAM,CAAC,iBAAiB,IAAI,qBAAqB;IAGjD,MAAM,CAAC,kBAAkB,CAAC,MAAM,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGjF,MAAM,CAAC,mBAAmB,CAAC,OAAO,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGnF,MAAM,CAAC,qBAAqB,CAAC,SAAS,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;IAGvF,MAAM,CAAC,gBAAgB,CAAC,IAAI,EAAE,qBAAqB,EAAE,GAAG,qBAAqB;CAGhF;AAED,wBAAgB,0BAA0B,IAAI,QAAQ,CAErD"}

package/dist/ts/ts/FileSystem/FileSystemTree.js

@@ -1,7 +1,7 @@
 import { defaultArg, unwrap } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { tryFind, item, tryPick, head, tail, map, equalsWith, choose, append as append$1 } from '../../node_modules/@fable-org/fable-library-js/Array.js';
 import { split, combineMany } from './Path.js';
-import { toArray, delay, append, singleton } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
+import { toArray, delay, append, singleton, empty as empty$1 } from '../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { Array_groupBy, Array_distinct } from '../../node_modules/@fable-org/fable-library-js/Seq2.js';
 import { stringHash, arrayHash, curry2 } from '../../node_modules/@fable-org/fable-library-js/Util.js';
 import { cons, toArray as toArray$1, reverse, empty } from '../../node_modules/@fable-org/fable-library-js/List.js';
@@ -272,53 +272,46 @@ class FileSystemTree extends Union {
   static createEmptyFolder(name) {
     return FileSystemTree.createFolder(name, [FileSystemTree.createGitKeepFile()]);
   }
-  static createAssayFolder(assayName, hasDataMap) {
-    const hasDataMap_1 = defaultArg(hasDataMap, false);
+  static createAssayFolder(assayName, hasDatamap) {
+    const hasDatamap_1 = defaultArg(hasDatamap, false);
     const dataset = FileSystemTree.createEmptyFolder("dataset");
     const protocols = FileSystemTree.createEmptyFolder("protocols");
     const readme = FileSystemTree.createReadmeFile();
     const assayFile = FileSystemTree.createFile("isa.assay.xlsx");
-    if (hasDataMap_1) {
-      const dataMapFile = FileSystemTree.createFile("isa.datamap.xlsx");
-      return FileSystemTree.createFolder(assayName, [dataset, protocols, assayFile, readme, dataMapFile]);
+    if (hasDatamap_1) {
+      const datamapFile = FileSystemTree.createFile("isa.datamap.xlsx");
+      return FileSystemTree.createFolder(assayName, [dataset, protocols, assayFile, readme, datamapFile]);
     } else {
       return FileSystemTree.createFolder(assayName, [dataset, protocols, assayFile, readme]);
     }
   }
-  static createStudyFolder(studyName, hasDataMap) {
-    const hasDataMap_1 = defaultArg(hasDataMap, false);
+  static createStudyFolder(studyName, hasDatamap) {
+    const hasDatamap_1 = defaultArg(hasDatamap, false);
     const resources = FileSystemTree.createEmptyFolder("resources");
     const protocols = FileSystemTree.createEmptyFolder("protocols");
     const readme = FileSystemTree.createReadmeFile();
     const studyFile = FileSystemTree.createFile("isa.study.xlsx");
-    if (hasDataMap_1) {
-      const dataMapFile = FileSystemTree.createFile("isa.datamap.xlsx");
-      return FileSystemTree.createFolder(studyName, [resources, protocols, studyFile, readme, dataMapFile]);
+    if (hasDatamap_1) {
+      const datamapFile = FileSystemTree.createFile("isa.datamap.xlsx");
+      return FileSystemTree.createFolder(studyName, [resources, protocols, studyFile, readme, datamapFile]);
     } else {
       return FileSystemTree.createFolder(studyName, [resources, protocols, studyFile, readme]);
     }
   }
-  static createWorkflowFolder(workflowName, hasDataMap) {
-    const hasDataMap_1 = defaultArg(hasDataMap, false);
+  static createWorkflowFolder(workflowName, hasCWL, hasDatamap) {
+    const hasDatamap_1 = defaultArg(hasDatamap, false);
+    const hasCWL_1 = defaultArg(hasCWL, false);
     const readme = FileSystemTree.createReadmeFile();
     const workflowFile = FileSystemTree.createFile("isa.workflow.xlsx");
-    if (hasDataMap_1) {
-      const dataMapFile = FileSystemTree.createFile("isa.datamap.xlsx");
-      return FileSystemTree.createFolder(workflowName, [workflowFile, readme, dataMapFile]);
-    } else {
-      return FileSystemTree.createFolder(workflowName, [workflowFile, readme]);
-    }
+    return FileSystemTree.createFolder(workflowName, toArray(delay(() => append(singleton(workflowFile), delay(() => append(singleton(readme), delay(() => append(hasCWL_1 ? singleton(FileSystemTree.createFile("workflow.cwl")) : empty$1(), delay(() => hasDatamap_1 ? singleton(FileSystemTree.createFile("isa.datamap.xlsx")) : empty$1())))))))));
   }
-  static createRunFolder(runName, hasDataMap) {
-    const hasDataMap_1 = defaultArg(hasDataMap, false);
+  static createRunFolder(runName, hasCWL, hasYML, hasDatamap) {
+    const hasDatamap_1 = defaultArg(hasDatamap, false);
+    const hasCWL_1 = defaultArg(hasCWL, false);
+    const hasYML_1 = defaultArg(hasYML, false);
     const readme = FileSystemTree.createReadmeFile();
     const runFile = FileSystemTree.createFile("isa.run.xlsx");
-    if (hasDataMap_1) {
-      const dataMapFile = FileSystemTree.createFile("isa.datamap.xlsx");
-      return FileSystemTree.createFolder(runName, [runFile, readme, dataMapFile]);
-    } else {
-      return FileSystemTree.createFolder(runName, [runFile, readme]);
-    }
+    return FileSystemTree.createFolder(runName, toArray(delay(() => append(singleton(runFile), delay(() => append(singleton(readme), delay(() => append(hasCWL_1 ? singleton(FileSystemTree.createFile("run.cwl")) : empty$1(), delay(() => append(hasYML_1 ? singleton(FileSystemTree.createFile("run.yml")) : empty$1(), delay(() => hasDatamap_1 ? singleton(FileSystemTree.createFile("isa.datamap.xlsx")) : empty$1())))))))))));
   }
   static createInvestigationFile() {
     return FileSystemTree.createFile("isa.investigation.xlsx");

package/dist/ts/ts/Json/Assay.js

@@ -2,7 +2,7 @@ import { choose, ofArray, singleton, empty } from '../../node_modules/@fable-org
 import { map, unwrap, defaultArg, value, bind } from '../../node_modules/@fable-org/fable-library-js/Option.js';
 import { tryInclude, tryIncludeSeq, tryIncludeList } from './Encode.js';
 import { OntologyAnnotation_encoder, OntologyAnnotation_decoder, OntologyAnnotation_ROCrate_encoderPropertyValue, OntologyAnnotation_ROCrate_encoderDefinedTerm, OntologyAnnotation_ROCrate_decoderPropertyValue, OntologyAnnotation_ROCrate_decoderDefinedTerm, OntologyAnnotation_ISAJson_encoder, OntologyAnnotation_ISAJson_decoder } from './OntologyAnnotation.js';
-import { encoder as encoder$1, decoder as decoder$2, encoderCompressed as encoderCompressed$2, decoderCompressed as decoderCompressed$2 } from './DataMap/DataMap.js';
+import { encoder as encoder$1, decoder as decoder$2, encoderCompressed as encoderCompressed$2, decoderCompressed as decoderCompressed$2 } from './Datamap/Datamap.js';
 import { encoder as encoder$2, decoder as decoder$1, encoderCompressed as encoderCompressed$1, decoderCompressed as decoderCompressed$1 } from './Table/ArcTable.js';
 import { encoder as encoder$3, decoder as decoder$3, ROCrate_encoder as ROCrate_encoder$1, ROCrate_decoder as ROCrate_decoder$2 } from './Person.js';
 import { encoder as encoder$4, decoder as decoder$4, ROCrate_encoder as ROCrate_encoder$4, ROCrate_decoder as ROCrate_decoder$3, ISAJson_encoder as ISAJson_encoder$3, ISAJson_decoder as ISAJson_decoder$2 } from './Comment.js';
@@ -38,7 +38,7 @@ function encoder(assay) {
     Encode(helpers_2) {
       return helpers_2.encodeString(value_3);
     }
-  }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryInclude("DataMap", encoder$1, assay.DataMap), tryIncludeSeq("Tables", encoder$2, assay.Tables), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
+  }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryInclude("Datamap", encoder$1, assay.Datamap), tryIncludeSeq("Tables", encoder$2, assay.Tables), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
   return {
     Encode(helpers_3) {
       const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
@@ -48,7 +48,7 @@ function encoder(assay) {
 }
 const decoder = object((get$) => {
   let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9;
-  return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((objectArg_7 = get$.Optional, objectArg_7.Field("DataMap", decoder$2))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
+  return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoder$1), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((objectArg_7 = get$.Optional, objectArg_7.Field("Datamap", decoder$2))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
 });
 function encoderCompressed(stringTable, oaTable, cellTable, assay) {
   let value;
@@ -64,7 +64,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, assay) {
     Encode(helpers_2) {
       return helpers_2.encodeString(value_3);
     }
-  }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryIncludeSeq("Tables", (table) => encoderCompressed$1(stringTable, oaTable, cellTable, table), assay.Tables), tryInclude("DataMap", (dm) => encoderCompressed$2(stringTable, oaTable, cellTable, dm), assay.DataMap), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
+  }), assay.Description), tryInclude("MeasurementType", OntologyAnnotation_encoder, assay.MeasurementType), tryInclude("TechnologyType", OntologyAnnotation_encoder, assay.TechnologyType), tryInclude("TechnologyPlatform", OntologyAnnotation_encoder, assay.TechnologyPlatform), tryIncludeSeq("Tables", (table) => encoderCompressed$1(stringTable, oaTable, cellTable, table), assay.Tables), tryInclude("Datamap", (dm) => encoderCompressed$2(stringTable, oaTable, cellTable, dm), assay.Datamap), tryIncludeSeq("Performers", encoder$3, assay.Performers), tryIncludeSeq("Comments", encoder$4, assay.Comments)]));
   return {
     Encode(helpers_3) {
       const arg = map$1((tupledArg_1) => [tupledArg_1[0], tupledArg_1[1].Encode(helpers_3)], values_1);
@@ -75,7 +75,7 @@ function encoderCompressed(stringTable, oaTable, cellTable, assay) {
 function decoderCompressed(stringTable, oaTable, cellTable) {
   return object((get$) => {
     let objectArg, objectArg_1, objectArg_2, objectArg_3, objectArg_4, objectArg_5, arg_13, objectArg_6, arg_15, objectArg_7, arg_17, objectArg_8, arg_19, objectArg_9;
-    return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((arg_15 = decoderCompressed$2(stringTable, oaTable, cellTable), objectArg_7 = get$.Optional, objectArg_7.Field("DataMap", arg_15))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
+    return ArcAssay.create((objectArg = get$.Required, objectArg.Field("Identifier", string)), unwrap((objectArg_1 = get$.Optional, objectArg_1.Field("Title", string))), unwrap((objectArg_2 = get$.Optional, objectArg_2.Field("Description", string))), unwrap((objectArg_3 = get$.Optional, objectArg_3.Field("MeasurementType", OntologyAnnotation_decoder))), unwrap((objectArg_4 = get$.Optional, objectArg_4.Field("TechnologyType", OntologyAnnotation_decoder))), unwrap((objectArg_5 = get$.Optional, objectArg_5.Field("TechnologyPlatform", OntologyAnnotation_decoder))), unwrap((arg_13 = resizeArray(decoderCompressed$1(stringTable, oaTable, cellTable)), objectArg_6 = get$.Optional, objectArg_6.Field("Tables", arg_13))), unwrap((arg_15 = decoderCompressed$2(stringTable, oaTable, cellTable), objectArg_7 = get$.Optional, objectArg_7.Field("Datamap", arg_15))), unwrap((arg_17 = resizeArray(decoder$3), objectArg_8 = get$.Optional, objectArg_8.Field("Performers", arg_17))), unwrap((arg_19 = resizeArray(decoder$4), objectArg_9 = get$.Optional, objectArg_9.Field("Comments", arg_19))));
   });
 }
 function ROCrate_genID(a) {

package/dist/ts/ts/Json/{DataMap → Datamap}/DataContext.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"DataContext.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/DataMap/DataContext.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AAKjH,OAAO,EAA+B,WAAW,EAAwK,MAAM,2BAA2B,CAAC;AAK3P,wBAAgB,OAAO,CAAC,EAAE,EAAE,WAAW,GAAG,UAAU,CAoBnD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,WAAW,CAMzC,CAAC"}
+{"version":3,"file":"DataContext.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/Datamap/DataContext.ts"],"names":[],"mappings":"AAEA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AAKjH,OAAO,EAA+B,WAAW,EAAwK,MAAM,2BAA2B,CAAC;AAK3P,wBAAgB,OAAO,CAAC,EAAE,EAAE,WAAW,GAAG,UAAU,CAoBnD;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,WAAW,CAMzC,CAAC"}

package/dist/ts/ts/Json/{DataMap/DataMap.d.ts → Datamap/Datamap.d.ts}

@@ -1,11 +1,11 @@
 import { Decoder$1, IEncodable } from '../../fable_modules/Thoth.Json.Core.0.7.0/Types.fs.js';
-import { DataMap } from '../../Core/DataMap.js';
+import { Datamap } from '../../Core/Datamap.js';
 import { IMap } from '@fable-org/fable-library-js/Util.js';
 import { int32 } from '@fable-org/fable-library-js/Int32.js';
 import { OntologyAnnotation } from '../../Core/OntologyAnnotation.js';
 import { CompositeCell_$union } from '../../Core/Table/CompositeCell.js';
-export declare function encoder(dm: DataMap): IEncodable;
-export declare const decoder: Decoder$1<DataMap>;
-export declare function encoderCompressed(stringTable: IMap<string, int32>, oaTable: IMap<OntologyAnnotation, int32>, cellTable: IMap<CompositeCell_$union, int32>, dm: DataMap): IEncodable;
-export declare function decoderCompressed(stringTable: string[], oaTable: OntologyAnnotation[], cellTable: CompositeCell_$union[]): Decoder$1<DataMap>;
-//# sourceMappingURL=DataMap.d.ts.map
+export declare function encoder(dm: Datamap): IEncodable;
+export declare const decoder: Decoder$1<Datamap>;
+export declare function encoderCompressed(stringTable: IMap<string, int32>, oaTable: IMap<OntologyAnnotation, int32>, cellTable: IMap<CompositeCell_$union, int32>, dm: Datamap): IEncodable;
+export declare function decoderCompressed(stringTable: string[], oaTable: OntologyAnnotation[], cellTable: CompositeCell_$union[]): Decoder$1<Datamap>;
+//# sourceMappingURL=Datamap.d.ts.map

package/dist/ts/ts/Json/{DataMap/DataMap.d.ts.map → Datamap/Datamap.d.ts.map}

@@ -1 +1 @@
-{"version":3,"file":"DataMap.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/DataMap/DataMap.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AACjH,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAEhD,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,kCAAkC,CAAC;AACtE,OAAO,EAAE,oBAAoB,EAAE,MAAM,mCAAmC,CAAC;AAEzE,wBAAgB,OAAO,CAAC,EAAE,EAAE,OAAO,GAAG,UAAU,CAQ/C;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,OAAO,CAGrC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,EAAE,EAAE,OAAO,GAAG,UAAU,CAEnL;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,CAE7I"}
+{"version":3,"file":"Datamap.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/Datamap/Datamap.ts"],"names":[],"mappings":"AAIA,OAAO,EAAE,SAAS,EAAqB,UAAU,EAAE,MAAM,uDAAuD,CAAC;AACjH,OAAO,EAAE,OAAO,EAAE,MAAM,uBAAuB,CAAC;AAEhD,OAAO,EAAE,IAAI,EAAE,MAAM,qCAAqC,CAAC;AAC3D,OAAO,EAAE,KAAK,EAAE,MAAM,sCAAsC,CAAC;AAC7D,OAAO,EAAE,kBAAkB,EAAE,MAAM,kCAAkC,CAAC;AACtE,OAAO,EAAE,oBAAoB,EAAE,MAAM,mCAAmC,CAAC;AAEzE,wBAAgB,OAAO,CAAC,EAAE,EAAE,OAAO,GAAG,UAAU,CAQ/C;AAED,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,OAAO,CAGrC,CAAC;AAEH,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,IAAI,CAAC,MAAM,EAAE,KAAK,CAAC,EAAE,OAAO,EAAE,IAAI,CAAC,kBAAkB,EAAE,KAAK,CAAC,EAAE,SAAS,EAAE,IAAI,CAAC,oBAAoB,EAAE,KAAK,CAAC,EAAE,EAAE,EAAE,OAAO,GAAG,UAAU,CAEnL;AAED,wBAAgB,iBAAiB,CAAC,WAAW,EAAE,MAAM,EAAE,EAAE,OAAO,EAAE,kBAAkB,EAAE,EAAE,SAAS,EAAE,oBAAoB,EAAE,GAAG,SAAS,CAAC,OAAO,CAAC,CAE7I"}

package/dist/ts/ts/Json/{DataMap/DataMap.js → Datamap/Datamap.js}

@@ -1,7 +1,7 @@
 import { seq } from '../../fable_modules/Thoth.Json.Core.0.7.0/Encode.fs.js';
 import { map } from '../../../node_modules/@fable-org/fable-library-js/Seq.js';
 import { encoder as encoder$1, decoder as decoder$1 } from './DataContext.js';
-import { DataMap } from '../../Core/DataMap.js';
+import { Datamap } from '../../Core/Datamap.js';
 import { object, resizeArray } from '../../fable_modules/Thoth.Json.Core.0.7.0/Decode.fs.js';
 
 function encoder(dm) {
@@ -15,7 +15,7 @@ function encoder(dm) {
 }
 const decoder = object((get$) => {
   let arg_1, objectArg;
-  return new DataMap((arg_1 = resizeArray(decoder$1), objectArg = get$.Required, objectArg.Field("dataContexts", arg_1)));
+  return new Datamap((arg_1 = resizeArray(decoder$1), objectArg = get$.Required, objectArg.Field("dataContexts", arg_1)));
 });
 function encoderCompressed(stringTable, oaTable, cellTable, dm) {
   return encoder(dm);

package/dist/ts/ts/Json/ROCrate/LDContext.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"LDContext.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/ROCrate/LDContext.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAkH,SAAS,EAAE,MAAM,uDAAuD,CAAC;AAC9M,OAAO,EAAE,SAAS,EAAE,MAAM,4BAA4B,CAAC;AAWvD,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,SAAS,CA4CxC,CAAC;AAEF,wBAAgB,OAAO,CAAC,OAAO,EAAE,SAAS,GAAG,UAAU,CAgEtD"}
+{"version":3,"file":"LDContext.d.ts","sourceRoot":"","sources":["../../../../../src/ARCtrl/ts/Json/ROCrate/LDContext.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,UAAU,EAAkH,SAAS,EAAE,MAAM,uDAAuD,CAAC;AAC9M,OAAO,EAAE,SAAS,EAAE,MAAM,4BAA4B,CAAC;AAWvD,eAAO,MAAM,OAAO,EAAE,SAAS,CAAC,SAAS,CA4CxC,CAAC;AAEF,wBAAgB,OAAO,CAAC,OAAO,EAAE,SAAS,GAAG,UAAU,CA0EtD"}