@nfdi4plants/arctrl 2.1.0-alpha.4 → 2.2.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (88) hide show
  1. package/CWL/CWLTypes.js +135 -0
  2. package/CWL/Decode.js +585 -0
  3. package/CWL/Inputs.js +62 -0
  4. package/CWL/Outputs.js +59 -0
  5. package/CWL/Requirements.js +72 -0
  6. package/CWL/ToolDescription.js +81 -0
  7. package/CWL/WorkflowDescription.js +81 -0
  8. package/CWL/WorkflowSteps.js +98 -0
  9. package/Core/ArcTypes.js +76 -87
  10. package/Core/Helper/Identifier.js +2 -2
  11. package/Core/OntologyAnnotation.js +8 -5
  12. package/Core/Table/ArcTable.js +15 -7
  13. package/Core/Table/CompositeHeader.js +4 -0
  14. package/Core/Template.js +8 -0
  15. package/Json/{ROCrateObject.js → LDObject.js} +66 -17
  16. package/Json/Process/Material.js +32 -8
  17. package/Json/Process/ProcessInput.js +3 -3
  18. package/Json/Process/Sample.js +32 -8
  19. package/Json/Process/Source.js +32 -8
  20. package/Json/context/rocrate/isa_assay_context.js +4 -4
  21. package/JsonIO/LDObject.js +31 -0
  22. package/ROCrate/ArcROCrateMetadata.js +35 -0
  23. package/ROCrate/ISAProfile/Assay.js +30 -2
  24. package/ROCrate/ISAProfile/Data.js +32 -5
  25. package/ROCrate/ISAProfile/Dataset.js +3 -3
  26. package/ROCrate/ISAProfile/Investigation.js +30 -2
  27. package/ROCrate/ISAProfile/LabProcess.js +113 -5
  28. package/ROCrate/ISAProfile/LabProtocol.js +4 -4
  29. package/ROCrate/ISAProfile/Person.js +32 -5
  30. package/ROCrate/ISAProfile/PropertyValue.js +59 -5
  31. package/ROCrate/ISAProfile/Sample.js +32 -5
  32. package/ROCrate/ISAProfile/ScholarlyArticle.js +59 -5
  33. package/ROCrate/ISAProfile/Study.js +30 -2
  34. package/ROCrate/LDObject.js +105 -0
  35. package/Spreadsheet/AnnotationTable/ArcTable.js +8 -5
  36. package/Spreadsheet/Template.js +29 -11
  37. package/Yaml/ValidationPackage.js +6 -6
  38. package/Yaml/ValidationPackagesConfig.js +6 -6
  39. package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynObj.fs +4 -4
  40. package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynObj.fs.js +0 -44
  41. package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/HashCodes.fs +4 -1
  42. package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/HashCodes.fs.js +8 -3
  43. package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Debug/netstandard2.0/DynamicObj.AssemblyInfo.fs +1 -1
  44. package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Release/netstandard2.0/DynamicObj.AssemblyInfo.fs +3 -3
  45. package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Decode.fs +398 -373
  46. package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Decode.fs.js +35 -2
  47. package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +1 -1
  48. package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +1 -1
  49. package/fable_modules/project_cracked.json +1 -1
  50. package/package.json +1 -1
  51. package/JsonIO/ROCrateObject.js +0 -146
  52. package/ROCrate/ROCrateObject.js +0 -61
  53. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fableproj +0 -0
  54. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fs +0 -0
  55. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fs.js +0 -0
  56. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FableJS.fs +0 -0
  57. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FableJS.fs.js +0 -0
  58. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FablePy.fs +0 -0
  59. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/PropertyHelper.fs +0 -0
  60. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/PropertyHelper.fs.js +0 -0
  61. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/ReflectionUtils.fs +0 -0
  62. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/ReflectionUtils.fs.js +0 -0
  63. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
  64. /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
  65. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Encode.fs +0 -0
  66. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Encode.fs.js +0 -0
  67. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/JsInterop.fs +0 -0
  68. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/JsInterop.fs.js +0 -0
  69. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/PyInterop.fs +0 -0
  70. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Library.fs +0 -0
  71. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Library.fs.js +0 -0
  72. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Persil.fs +0 -0
  73. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Persil.fs.js +0 -0
  74. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Preprocessing.fs +0 -0
  75. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Preprocessing.fs.js +0 -0
  76. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Reader.fs +0 -0
  77. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Reader.fs.js +0 -0
  78. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Regex.fs +0 -0
  79. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Regex.fs.js +0 -0
  80. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/RegexActivePatterns.fs +0 -0
  81. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/RegexActivePatterns.fs.js +0 -0
  82. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Writer.fs +0 -0
  83. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Writer.fs.js +0 -0
  84. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLicious.fableproj +0 -0
  85. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLiciousTypes.fs +0 -0
  86. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLiciousTypes.fs.js +0 -0
  87. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
  88. /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0