@nfdi4plants/arctrl 2.1.0-alpha.3 → 2.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CWL/CWLTypes.js +135 -0
- package/CWL/Decode.js +585 -0
- package/CWL/Inputs.js +62 -0
- package/CWL/Outputs.js +59 -0
- package/CWL/Requirements.js +72 -0
- package/CWL/ToolDescription.js +81 -0
- package/CWL/WorkflowDescription.js +81 -0
- package/CWL/WorkflowSteps.js +98 -0
- package/Core/ArcTypes.js +76 -87
- package/Core/Helper/Identifier.js +2 -2
- package/Core/OntologyAnnotation.js +8 -5
- package/Core/Table/ArcTable.js +15 -7
- package/Core/Table/CompositeHeader.js +4 -0
- package/Core/Template.js +8 -0
- package/Json/{ROCrateObject.js → LDObject.js} +66 -17
- package/JsonIO/LDObject.js +31 -0
- package/ROCrate/ArcROCrateMetadata.js +35 -0
- package/ROCrate/ISAProfile/Assay.js +30 -2
- package/ROCrate/ISAProfile/Data.js +32 -5
- package/ROCrate/ISAProfile/Dataset.js +3 -3
- package/ROCrate/ISAProfile/Investigation.js +30 -2
- package/ROCrate/ISAProfile/LabProcess.js +113 -5
- package/ROCrate/ISAProfile/LabProtocol.js +4 -4
- package/ROCrate/ISAProfile/Person.js +32 -5
- package/ROCrate/ISAProfile/PropertyValue.js +59 -5
- package/ROCrate/ISAProfile/Sample.js +32 -5
- package/ROCrate/ISAProfile/ScholarlyArticle.js +59 -5
- package/ROCrate/ISAProfile/Study.js +30 -2
- package/ROCrate/LDObject.js +105 -0
- package/Spreadsheet/AnnotationTable/ArcTable.js +8 -5
- package/Spreadsheet/Template.js +29 -11
- package/Yaml/ValidationPackage.js +6 -6
- package/Yaml/ValidationPackagesConfig.js +6 -6
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynObj.fs +4 -4
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynObj.fs.js +0 -44
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/HashCodes.fs +4 -1
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/HashCodes.fs.js +8 -3
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Debug/netstandard2.0/DynamicObj.AssemblyInfo.fs +1 -1
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Release/netstandard2.0/DynamicObj.AssemblyInfo.fs +3 -3
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Decode.fs +398 -373
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Decode.fs.js +35 -2
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +1 -1
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +1 -1
- package/fable_modules/project_cracked.json +1 -1
- package/package.json +1 -1
- package/JsonIO/ROCrateObject.js +0 -146
- package/ROCrate/ROCrateObject.js +0 -61
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fableproj +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FableJS.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FableJS.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FablePy.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/PropertyHelper.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/PropertyHelper.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/ReflectionUtils.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/ReflectionUtils.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Encode.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Encode.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/JsInterop.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/JsInterop.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/PyInterop.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Library.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Library.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Persil.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Persil.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Preprocessing.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Preprocessing.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Reader.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Reader.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Regex.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Regex.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/RegexActivePatterns.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/RegexActivePatterns.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Writer.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Writer.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLicious.fableproj +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLiciousTypes.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLiciousTypes.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
package/Core/ArcTypes.js
CHANGED
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@@ -353,21 +353,10 @@ export class ArcAssay extends ArcTables {
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}
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Copy() {
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const this$ = this;
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const nextTables =
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-
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try {
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while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
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const table = enumerator["System.Collections.Generic.IEnumerator`1.get_Current"]();
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const copy = table.Copy();
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void (nextTables.push(copy));
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}
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}
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finally {
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disposeSafe(enumerator);
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}
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const nextComments = ResizeArray_map((c) => c.Copy(), this$.Comments);
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const nextTables = ResizeArray_map((c) => c.Copy(), this$.Tables);
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const nextComments = ResizeArray_map((c_1) => c_1.Copy(), this$.Comments);
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const nextDataMap = map(DataMap__Copy, this$.DataMap);
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const nextPerformers = ResizeArray_map((
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const nextPerformers = ResizeArray_map((c_2) => c_2.Copy(), this$.Performers);
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const identifier = this$.Identifier;
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const measurementType = this$.MeasurementType;
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const technologyType = this$.TechnologyType;
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@@ -622,27 +611,27 @@ export class ArcStudy extends ArcTables {
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const studyDesignDescriptors_1 = defaultArg(studyDesignDescriptors, []);
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const registeredAssayIdentifiers_1 = defaultArg(registeredAssayIdentifiers, []);
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const comments_1 = defaultArg(comments, []);
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this["identifier@
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this["identifier@533"] = ((identifier_1 = identifier.trim(), (checkValidCharacters(identifier_1), identifier_1)));
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this.investigation = undefined;
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this["title@
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this["description@
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this["submissionDate@
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this["publicReleaseDate@
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this["publications@
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this["contacts@
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this["studyDesignDescriptors@
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this["datamap@
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this["registeredAssayIdentifiers@
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this["comments@
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this["title@538"] = title;
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this["description@539"] = description;
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this["submissionDate@540"] = submissionDate;
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this["publicReleaseDate@541"] = publicReleaseDate;
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this["publications@542-1"] = publications_1;
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this["contacts@543-1"] = contacts_1;
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this["studyDesignDescriptors@544-1"] = studyDesignDescriptors_1;
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this["datamap@545"] = datamap;
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this["registeredAssayIdentifiers@546-1"] = registeredAssayIdentifiers_1;
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this["comments@547-1"] = comments_1;
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this.staticHash = 0;
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}
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get Identifier() {
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const this$ = this;
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return this$["identifier@
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return this$["identifier@533"];
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}
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set Identifier(i) {
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const this$ = this;
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this$["identifier@
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this$["identifier@533"] = i;
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}
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get Investigation() {
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const this$ = this;
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@@ -654,83 +643,83 @@ export class ArcStudy extends ArcTables {
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}
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get Title() {
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const this$ = this;
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return unwrap(this$["title@
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return unwrap(this$["title@538"]);
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}
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set Title(n) {
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const this$ = this;
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this$["title@
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this$["title@538"] = n;
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}
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get Description() {
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const this$ = this;
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return unwrap(this$["description@
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return unwrap(this$["description@539"]);
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}
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set Description(n) {
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const this$ = this;
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this$["description@
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this$["description@539"] = n;
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}
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get SubmissionDate() {
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const this$ = this;
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return unwrap(this$["submissionDate@
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return unwrap(this$["submissionDate@540"]);
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}
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set SubmissionDate(n) {
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const this$ = this;
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this$["submissionDate@
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this$["submissionDate@540"] = n;
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}
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get PublicReleaseDate() {
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const this$ = this;
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return unwrap(this$["publicReleaseDate@
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return unwrap(this$["publicReleaseDate@541"]);
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}
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set PublicReleaseDate(n) {
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const this$ = this;
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this$["publicReleaseDate@
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this$["publicReleaseDate@541"] = n;
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}
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get Publications() {
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const this$ = this;
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return this$["publications@
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return this$["publications@542-1"];
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}
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set Publications(n) {
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const this$ = this;
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this$["publications@
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this$["publications@542-1"] = n;
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}
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get Contacts() {
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const this$ = this;
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return this$["contacts@
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return this$["contacts@543-1"];
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}
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set Contacts(n) {
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const this$ = this;
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this$["contacts@
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this$["contacts@543-1"] = n;
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}
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get StudyDesignDescriptors() {
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const this$ = this;
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return this$["studyDesignDescriptors@
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return this$["studyDesignDescriptors@544-1"];
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}
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set StudyDesignDescriptors(n) {
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const this$ = this;
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this$["studyDesignDescriptors@
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this$["studyDesignDescriptors@544-1"] = n;
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}
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get DataMap() {
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const this$ = this;
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return unwrap(this$["datamap@
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return unwrap(this$["datamap@545"]);
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}
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set DataMap(n) {
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const this$ = this;
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this$["datamap@
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this$["datamap@545"] = n;
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}
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get RegisteredAssayIdentifiers() {
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const this$ = this;
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return this$["registeredAssayIdentifiers@
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return this$["registeredAssayIdentifiers@546-1"];
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}
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set RegisteredAssayIdentifiers(n) {
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const this$ = this;
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this$["registeredAssayIdentifiers@
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this$["registeredAssayIdentifiers@546-1"] = n;
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}
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get Comments() {
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const this$ = this;
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return this$["comments@
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return this$["comments@547-1"];
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}
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set Comments(n) {
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const this$ = this;
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this$["comments@
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this$["comments@547-1"] = n;
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}
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get StaticHash() {
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const this$ = this;
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@@ -1327,125 +1316,125 @@ export class ArcInvestigation {
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const registeredStudyIdentifiers_1 = defaultArg(registeredStudyIdentifiers, []);
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const comments_1 = defaultArg(comments, []);
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const remarks_1 = defaultArg(remarks, []);
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this["identifier@
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this["title@
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this["description@
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this["submissionDate@
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this["publicReleaseDate@
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this["ontologySourceReferences@
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this["publications@
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this["contacts@
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this["assays@
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this["studies@
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this["registeredStudyIdentifiers@
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this["comments@
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this["remarks@
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this["identifier@1122"] = identifier;
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this["title@1123"] = title;
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this["description@1124"] = description;
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this["submissionDate@1125"] = submissionDate;
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this["publicReleaseDate@1126"] = publicReleaseDate;
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this["ontologySourceReferences@1127-1"] = ontologySourceReferences_1;
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this["publications@1128-1"] = publications_1;
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this["contacts@1129-1"] = contacts_1;
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this["assays@1130-1"] = assays_1;
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this["studies@1131-1"] = studies_1;
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this["registeredStudyIdentifiers@1132-1"] = registeredStudyIdentifiers_1;
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this["comments@1133-1"] = comments_1;
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this["remarks@1134-1"] = remarks_1;
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this.staticHash = 0;
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this["init@
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this["init@1103"] = 1;
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}
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get Identifier() {
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const this$ = this;
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return this$["identifier@
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return this$["identifier@1122"];
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}
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set Identifier(i) {
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const this$ = this;
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this$["identifier@
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this$["identifier@1122"] = i;
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}
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get Title() {
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const this$ = this;
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|
-
return unwrap(this$["title@
|
|
1345
|
+
return unwrap(this$["title@1123"]);
|
|
1357
1346
|
}
|
|
1358
1347
|
set Title(n) {
|
|
1359
1348
|
const this$ = this;
|
|
1360
|
-
this$["title@
|
|
1349
|
+
this$["title@1123"] = n;
|
|
1361
1350
|
}
|
|
1362
1351
|
get Description() {
|
|
1363
1352
|
const this$ = this;
|
|
1364
|
-
return unwrap(this$["description@
|
|
1353
|
+
return unwrap(this$["description@1124"]);
|
|
1365
1354
|
}
|
|
1366
1355
|
set Description(n) {
|
|
1367
1356
|
const this$ = this;
|
|
1368
|
-
this$["description@
|
|
1357
|
+
this$["description@1124"] = n;
|
|
1369
1358
|
}
|
|
1370
1359
|
get SubmissionDate() {
|
|
1371
1360
|
const this$ = this;
|
|
1372
|
-
return unwrap(this$["submissionDate@
|
|
1361
|
+
return unwrap(this$["submissionDate@1125"]);
|
|
1373
1362
|
}
|
|
1374
1363
|
set SubmissionDate(n) {
|
|
1375
1364
|
const this$ = this;
|
|
1376
|
-
this$["submissionDate@
|
|
1365
|
+
this$["submissionDate@1125"] = n;
|
|
1377
1366
|
}
|
|
1378
1367
|
get PublicReleaseDate() {
|
|
1379
1368
|
const this$ = this;
|
|
1380
|
-
return unwrap(this$["publicReleaseDate@
|
|
1369
|
+
return unwrap(this$["publicReleaseDate@1126"]);
|
|
1381
1370
|
}
|
|
1382
1371
|
set PublicReleaseDate(n) {
|
|
1383
1372
|
const this$ = this;
|
|
1384
|
-
this$["publicReleaseDate@
|
|
1373
|
+
this$["publicReleaseDate@1126"] = n;
|
|
1385
1374
|
}
|
|
1386
1375
|
get OntologySourceReferences() {
|
|
1387
1376
|
const this$ = this;
|
|
1388
|
-
return this$["ontologySourceReferences@
|
|
1377
|
+
return this$["ontologySourceReferences@1127-1"];
|
|
1389
1378
|
}
|
|
1390
1379
|
set OntologySourceReferences(n) {
|
|
1391
1380
|
const this$ = this;
|
|
1392
|
-
this$["ontologySourceReferences@
|
|
1381
|
+
this$["ontologySourceReferences@1127-1"] = n;
|
|
1393
1382
|
}
|
|
1394
1383
|
get Publications() {
|
|
1395
1384
|
const this$ = this;
|
|
1396
|
-
return this$["publications@
|
|
1385
|
+
return this$["publications@1128-1"];
|
|
1397
1386
|
}
|
|
1398
1387
|
set Publications(n) {
|
|
1399
1388
|
const this$ = this;
|
|
1400
|
-
this$["publications@
|
|
1389
|
+
this$["publications@1128-1"] = n;
|
|
1401
1390
|
}
|
|
1402
1391
|
get Contacts() {
|
|
1403
1392
|
const this$ = this;
|
|
1404
|
-
return this$["contacts@
|
|
1393
|
+
return this$["contacts@1129-1"];
|
|
1405
1394
|
}
|
|
1406
1395
|
set Contacts(n) {
|
|
1407
1396
|
const this$ = this;
|
|
1408
|
-
this$["contacts@
|
|
1397
|
+
this$["contacts@1129-1"] = n;
|
|
1409
1398
|
}
|
|
1410
1399
|
get Assays() {
|
|
1411
1400
|
const this$ = this;
|
|
1412
|
-
return this$["assays@
|
|
1401
|
+
return this$["assays@1130-1"];
|
|
1413
1402
|
}
|
|
1414
1403
|
set Assays(n) {
|
|
1415
1404
|
const this$ = this;
|
|
1416
|
-
this$["assays@
|
|
1405
|
+
this$["assays@1130-1"] = n;
|
|
1417
1406
|
}
|
|
1418
1407
|
get Studies() {
|
|
1419
1408
|
const this$ = this;
|
|
1420
|
-
return this$["studies@
|
|
1409
|
+
return this$["studies@1131-1"];
|
|
1421
1410
|
}
|
|
1422
1411
|
set Studies(n) {
|
|
1423
1412
|
const this$ = this;
|
|
1424
|
-
this$["studies@
|
|
1413
|
+
this$["studies@1131-1"] = n;
|
|
1425
1414
|
}
|
|
1426
1415
|
get RegisteredStudyIdentifiers() {
|
|
1427
1416
|
const this$ = this;
|
|
1428
|
-
return this$["registeredStudyIdentifiers@
|
|
1417
|
+
return this$["registeredStudyIdentifiers@1132-1"];
|
|
1429
1418
|
}
|
|
1430
1419
|
set RegisteredStudyIdentifiers(n) {
|
|
1431
1420
|
const this$ = this;
|
|
1432
|
-
this$["registeredStudyIdentifiers@
|
|
1421
|
+
this$["registeredStudyIdentifiers@1132-1"] = n;
|
|
1433
1422
|
}
|
|
1434
1423
|
get Comments() {
|
|
1435
1424
|
const this$ = this;
|
|
1436
|
-
return this$["comments@
|
|
1425
|
+
return this$["comments@1133-1"];
|
|
1437
1426
|
}
|
|
1438
1427
|
set Comments(n) {
|
|
1439
1428
|
const this$ = this;
|
|
1440
|
-
this$["comments@
|
|
1429
|
+
this$["comments@1133-1"] = n;
|
|
1441
1430
|
}
|
|
1442
1431
|
get Remarks() {
|
|
1443
1432
|
const this$ = this;
|
|
1444
|
-
return this$["remarks@
|
|
1433
|
+
return this$["remarks@1134-1"];
|
|
1445
1434
|
}
|
|
1446
1435
|
set Remarks(n) {
|
|
1447
1436
|
const this$ = this;
|
|
1448
|
-
this$["remarks@
|
|
1437
|
+
this$["remarks@1134-1"] = n;
|
|
1449
1438
|
}
|
|
1450
1439
|
get StaticHash() {
|
|
1451
1440
|
const this$ = this;
|
|
@@ -49,7 +49,7 @@ export function Assay_identifierFromFileName(fileName) {
|
|
|
49
49
|
return (m.groups && m.groups.identifier) || "";
|
|
50
50
|
}
|
|
51
51
|
else {
|
|
52
|
-
throw new Error(`Cannot parse identifier from FileName \`${fileName}\``);
|
|
52
|
+
throw new Error(`Cannot parse assay identifier from FileName \`${fileName}\``);
|
|
53
53
|
}
|
|
54
54
|
}
|
|
55
55
|
|
|
@@ -121,7 +121,7 @@ export function Study_identifierFromFileName(fileName) {
|
|
|
121
121
|
return (m.groups && m.groups.identifier) || "";
|
|
122
122
|
}
|
|
123
123
|
else {
|
|
124
|
-
throw new Error(`Cannot parse identifier from FileName \`${fileName}\``);
|
|
124
|
+
throw new Error(`Cannot parse study identifier from FileName \`${fileName}\``);
|
|
125
125
|
}
|
|
126
126
|
}
|
|
127
127
|
|
|
@@ -12,9 +12,9 @@ import { class_type } from "../fable_modules/fable-library-js.4.22.0/Reflection.
|
|
|
12
12
|
|
|
13
13
|
export class OntologyAnnotation {
|
|
14
14
|
constructor(name, tsr, tan, comments) {
|
|
15
|
-
this._name = name;
|
|
16
|
-
this._termSourceREF = tsr;
|
|
17
|
-
this._termAccessionNumber = tan;
|
|
15
|
+
this._name = ((name == null) ? undefined : ((name === "") ? undefined : name));
|
|
16
|
+
this._termSourceREF = ((tsr == null) ? undefined : ((tsr === "") ? undefined : tsr));
|
|
17
|
+
this._termAccessionNumber = ((tan == null) ? undefined : ((tan === "") ? undefined : ((tan === ":") ? undefined : tan)));
|
|
18
18
|
this._comments = defaultArg(comments, []);
|
|
19
19
|
}
|
|
20
20
|
get Name() {
|
|
@@ -57,9 +57,12 @@ export class OntologyAnnotation {
|
|
|
57
57
|
return OntologyAnnotation.make(name, tsr, tan, comments_1);
|
|
58
58
|
}
|
|
59
59
|
get TANInfo() {
|
|
60
|
-
let matchValue;
|
|
60
|
+
let matchValue, tan, matchValue_1, matchValue_2, tsr;
|
|
61
61
|
const this$ = this;
|
|
62
|
-
return unwrap((matchValue = this$.TermAccessionNumber, (matchValue == null) ? undefined : tryParseTermAnnotation(
|
|
62
|
+
return unwrap((matchValue = this$.TermAccessionNumber, (matchValue == null) ? undefined : ((tan = matchValue, (matchValue_1 = tryParseTermAnnotation(tan), (matchValue_1 == null) ? ((matchValue_2 = this$.TermSourceREF, (matchValue_2 == null) ? undefined : ((matchValue_2 === "") ? undefined : ((tsr = matchValue_2, {
|
|
63
|
+
IDSpace: tsr,
|
|
64
|
+
LocalID: tan,
|
|
65
|
+
}))))) : matchValue_1)))));
|
|
63
66
|
}
|
|
64
67
|
get NameText() {
|
|
65
68
|
const this$ = this;
|
package/Core/Table/ArcTable.js
CHANGED
|
@@ -2,13 +2,14 @@ import { boxHashValues, Unchecked_alignByHeaders, Unchecked_extendToRowCount, Un
|
|
|
2
2
|
import { Dictionary } from "../../fable_modules/fable-library-js.4.22.0/MutableMap.js";
|
|
3
3
|
import { compareArrays, safeHash, comparePrimitives, equals, disposeSafe, getEnumerator, arrayHash, equalArrays } from "../../fable_modules/fable-library-js.4.22.0/Util.js";
|
|
4
4
|
import { value as value_3, map as map_2, unwrap, defaultArg } from "../../fable_modules/fable-library-js.4.22.0/Option.js";
|
|
5
|
-
import { item as item_1, fold, append as append_1, toList, indexed as indexed_1, choose, filter, length, tryFindIndex, empty, singleton, collect, removeAt, map, delay, toArray } from "../../fable_modules/fable-library-js.4.22.0/Seq.js";
|
|
5
|
+
import { item as item_1, fold, append as append_1, toList, indexed as indexed_1, choose, filter, length, tryFindIndex, empty, singleton, collect, removeAt, iterate, map, delay, toArray } from "../../fable_modules/fable-library-js.4.22.0/Seq.js";
|
|
6
6
|
import { rangeDouble } from "../../fable_modules/fable-library-js.4.22.0/Range.js";
|
|
7
|
+
import { ResizeArray_map } from "../Helper/Collections.js";
|
|
8
|
+
import { getItemFromDict, addToDict } from "../../fable_modules/fable-library-js.4.22.0/MapUtil.js";
|
|
7
9
|
import { join, printf, toFail } from "../../fable_modules/fable-library-js.4.22.0/String.js";
|
|
8
|
-
import { getItemFromDict } from "../../fable_modules/fable-library-js.4.22.0/MapUtil.js";
|
|
9
10
|
import { CompositeColumn } from "./CompositeColumn.js";
|
|
10
11
|
import { sortBy, indexed, mapIndexed, item, sortDescending, iterateIndexed, initialize, map as map_1 } from "../../fable_modules/fable-library-js.4.22.0/Array.js";
|
|
11
|
-
import { append, iterate, isEmpty } from "../../fable_modules/fable-library-js.4.22.0/List.js";
|
|
12
|
+
import { append, iterate as iterate_1, isEmpty } from "../../fable_modules/fable-library-js.4.22.0/List.js";
|
|
12
13
|
import { StringBuilder__AppendLine_Z721C83C5, StringBuilder_$ctor } from "../../fable_modules/fable-library-js.4.22.0/System.Text.js";
|
|
13
14
|
import { toString } from "../../fable_modules/fable-library-js.4.22.0/Types.js";
|
|
14
15
|
import { CompositeCell } from "./CompositeCell.js";
|
|
@@ -92,10 +93,17 @@ export class ArcTable {
|
|
|
92
93
|
}
|
|
93
94
|
Copy() {
|
|
94
95
|
const this$ = this;
|
|
95
|
-
|
|
96
|
+
const nextHeaders = ResizeArray_map((h) => h.Copy(), this$.Headers);
|
|
97
|
+
const nextValues = new Dictionary([], {
|
|
96
98
|
Equals: equalArrays,
|
|
97
99
|
GetHashCode: arrayHash,
|
|
98
|
-
})
|
|
100
|
+
});
|
|
101
|
+
iterate((tupledArg) => {
|
|
102
|
+
const ci = tupledArg[0] | 0;
|
|
103
|
+
const ri = tupledArg[1] | 0;
|
|
104
|
+
addToDict(nextValues, [ci, ri], getItemFromDict(this$.Values, [ci, ri]).Copy());
|
|
105
|
+
}, this$.Values.keys());
|
|
106
|
+
return ArcTable.create(this$.Name, nextHeaders, nextValues);
|
|
99
107
|
}
|
|
100
108
|
TryGetCellAt(column, row) {
|
|
101
109
|
const this$ = this;
|
|
@@ -345,7 +353,7 @@ export class ArcTable {
|
|
|
345
353
|
if (!isEmpty(duplicates)) {
|
|
346
354
|
const sb = StringBuilder_$ctor();
|
|
347
355
|
StringBuilder__AppendLine_Z721C83C5(sb, "Found duplicate unique columns in `columns`.");
|
|
348
|
-
|
|
356
|
+
iterate_1((x_1) => {
|
|
349
357
|
StringBuilder__AppendLine_Z721C83C5(sb, `Duplicate \`${x_1.HeaderType}\` at index ${x_1.Index1} and ${x_1.Index2}.`);
|
|
350
358
|
}, duplicates);
|
|
351
359
|
throw new Error(toString(sb));
|
|
@@ -696,7 +704,7 @@ export class ArcTable {
|
|
|
696
704
|
if (!isEmpty(duplicates)) {
|
|
697
705
|
const sb = StringBuilder_$ctor();
|
|
698
706
|
StringBuilder__AppendLine_Z721C83C5(sb, "Found duplicate unique columns in `columns`.");
|
|
699
|
-
|
|
707
|
+
iterate_1((x_1) => {
|
|
700
708
|
StringBuilder__AppendLine_Z721C83C5(sb, `Duplicate \`${x_1.HeaderType}\` at index ${x_1.Index1} and ${x_1.Index2}.`);
|
|
701
709
|
}, duplicates);
|
|
702
710
|
throw new Error(toString(sb));
|
|
@@ -486,6 +486,10 @@ export class CompositeHeader extends Union {
|
|
|
486
486
|
return false;
|
|
487
487
|
}
|
|
488
488
|
}
|
|
489
|
+
Copy() {
|
|
490
|
+
const this$ = this;
|
|
491
|
+
return (this$.tag === 3) ? (new CompositeHeader(3, [this$.fields[0].Copy()])) : ((this$.tag === 2) ? (new CompositeHeader(2, [this$.fields[0].Copy()])) : ((this$.tag === 1) ? (new CompositeHeader(1, [this$.fields[0].Copy()])) : ((this$.tag === 0) ? (new CompositeHeader(0, [this$.fields[0].Copy()])) : this$)));
|
|
492
|
+
}
|
|
489
493
|
static component(oa) {
|
|
490
494
|
return new CompositeHeader(0, [oa]);
|
|
491
495
|
}
|
package/Core/Template.js
CHANGED
|
@@ -5,6 +5,7 @@ import { defaultArg, unwrap } from "../fable_modules/fable-library-js.4.22.0/Opt
|
|
|
5
5
|
import { newGuid } from "../fable_modules/fable-library-js.4.22.0/Guid.js";
|
|
6
6
|
import { ArcTable } from "./Table/ArcTable.js";
|
|
7
7
|
import { SemVer_tryOfString_Z721C83C5 } from "./Helper/SemVer.js";
|
|
8
|
+
import { ResizeArray_map } from "./Helper/Collections.js";
|
|
8
9
|
import { hashDateTime, boxHashSeq, boxHashArray } from "./Helper/HashCodes.js";
|
|
9
10
|
import { now } from "../fable_modules/fable-library-js.4.22.0/Date.js";
|
|
10
11
|
|
|
@@ -156,6 +157,13 @@ export class Template {
|
|
|
156
157
|
const this$ = this;
|
|
157
158
|
return safeHash(this$) === safeHash(other);
|
|
158
159
|
}
|
|
160
|
+
Copy() {
|
|
161
|
+
const this$ = this;
|
|
162
|
+
const nextAuthors = ResizeArray_map((c) => c.Copy(), this$.Authors);
|
|
163
|
+
const nextRepos = ResizeArray_map((c_1) => c_1.Copy(), this$.EndpointRepositories);
|
|
164
|
+
const nextTags = ResizeArray_map((c_2) => c_2.Copy(), this$.Tags);
|
|
165
|
+
return Template.create(this$.Id, this$.Table.Copy(), this$.Name, this$.Description, this$.Organisation, this$.Version, nextAuthors, nextRepos, nextTags, this$.LastUpdated);
|
|
166
|
+
}
|
|
159
167
|
Equals(other) {
|
|
160
168
|
let template;
|
|
161
169
|
const this$ = this;
|
|
@@ -1,9 +1,10 @@
|
|
|
1
1
|
import { dateTime } from "./Encode.js";
|
|
2
|
-
import {
|
|
2
|
+
import { LDObject } from "../ROCrate/LDObject.js";
|
|
3
3
|
import { int32ToString, disposeSafe, getEnumerator, isIterable, defaultOf, equals } from "../fable_modules/fable-library-js.4.22.0/Util.js";
|
|
4
4
|
import { list } from "../fable_modules/Thoth.Json.Core.0.4.0/Encode.fs.js";
|
|
5
|
-
import { enumerateFromFunctions, map, delay, toList } from "../fable_modules/fable-library-js.4.22.0/Seq.js";
|
|
6
|
-
import {
|
|
5
|
+
import { empty, singleton, append, choose, enumerateFromFunctions, map, delay, toList } from "../fable_modules/fable-library-js.4.22.0/Seq.js";
|
|
6
|
+
import { value as value_10 } from "../fable_modules/fable-library-js.4.22.0/Option.js";
|
|
7
|
+
import { decimal, int, oneOf, map as map_1, Getters$2__get_Errors, string, Getters$2_$ctor_Z4BE6C149 } from "../fable_modules/Thoth.Json.Core.0.4.0/Decode.fs.js";
|
|
7
8
|
import { ofArray, head, length, isEmpty } from "../fable_modules/fable-library-js.4.22.0/List.js";
|
|
8
9
|
import { ErrorReason$1 } from "../fable_modules/Thoth.Json.Core.0.4.0/Types.fs.js";
|
|
9
10
|
import { FSharpResult$2 } from "../fable_modules/fable-library-js.4.22.0/Result.js";
|
|
@@ -42,7 +43,7 @@ export function genericEncoder(obj) {
|
|
|
42
43
|
else if (obj instanceof Date) {
|
|
43
44
|
return dateTime(obj);
|
|
44
45
|
}
|
|
45
|
-
else if (obj instanceof
|
|
46
|
+
else if (obj instanceof LDObject) {
|
|
46
47
|
return encoder(obj);
|
|
47
48
|
}
|
|
48
49
|
else if (equals(obj, defaultOf())) {
|
|
@@ -62,32 +63,71 @@ export function genericEncoder(obj) {
|
|
|
62
63
|
}
|
|
63
64
|
|
|
64
65
|
export function encoder(obj) {
|
|
65
|
-
|
|
66
|
+
let values;
|
|
67
|
+
const source_2 = choose((kv) => {
|
|
68
|
+
const l = kv[0].toLocaleLowerCase();
|
|
69
|
+
if (((l !== "id") && (l !== "schematype")) && (l !== "additionaltype")) {
|
|
70
|
+
return [kv[0], genericEncoder(kv[1])];
|
|
71
|
+
}
|
|
72
|
+
else {
|
|
73
|
+
return undefined;
|
|
74
|
+
}
|
|
75
|
+
}, obj.GetProperties(true));
|
|
76
|
+
values = append(toList(delay(() => {
|
|
77
|
+
let value;
|
|
78
|
+
return append(singleton(["@id", (value = obj.Id, {
|
|
79
|
+
Encode(helpers) {
|
|
80
|
+
return helpers.encodeString(value);
|
|
81
|
+
},
|
|
82
|
+
})]), delay(() => {
|
|
83
|
+
let value_1;
|
|
84
|
+
return append(singleton(["@type", (value_1 = obj.SchemaType, {
|
|
85
|
+
Encode(helpers_1) {
|
|
86
|
+
return helpers_1.encodeString(value_1);
|
|
87
|
+
},
|
|
88
|
+
})]), delay(() => {
|
|
89
|
+
let value_2;
|
|
90
|
+
return (obj.AdditionalType != null) ? singleton(["additionalType", (value_2 = value_10(obj.AdditionalType), {
|
|
91
|
+
Encode(helpers_2) {
|
|
92
|
+
return helpers_2.encodeString(value_2);
|
|
93
|
+
},
|
|
94
|
+
})]) : empty();
|
|
95
|
+
}));
|
|
96
|
+
}));
|
|
97
|
+
})), source_2);
|
|
66
98
|
return {
|
|
67
|
-
Encode(
|
|
68
|
-
const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(
|
|
69
|
-
return
|
|
99
|
+
Encode(helpers_3) {
|
|
100
|
+
const arg = map((tupledArg) => [tupledArg[0], tupledArg[1].Encode(helpers_3)], values);
|
|
101
|
+
return helpers_3.encodeObject(arg);
|
|
70
102
|
},
|
|
71
103
|
};
|
|
72
104
|
}
|
|
73
105
|
|
|
74
|
-
|
|
75
|
-
|
|
106
|
+
/**
|
|
107
|
+
* Returns a decoder
|
|
108
|
+
*
|
|
109
|
+
* If expectObject is set to true, decoder fails if top-level value is not an ROCrate object
|
|
110
|
+
*/
|
|
111
|
+
export function getDecoder(expectObject) {
|
|
112
|
+
const decode = (expectObject_1) => {
|
|
76
113
|
const decodeObject = {
|
|
77
114
|
Decode(helpers, value) {
|
|
78
|
-
let
|
|
115
|
+
let objectArg_1, arg_5, objectArg_2;
|
|
79
116
|
if (helpers.isObject(value)) {
|
|
80
117
|
const getters = Getters$2_$ctor_Z4BE6C149(helpers, value);
|
|
81
118
|
const properties = helpers.getProperties(value);
|
|
82
119
|
let result;
|
|
83
120
|
const get$ = getters;
|
|
84
|
-
|
|
121
|
+
let t;
|
|
122
|
+
const objectArg = get$.Required;
|
|
123
|
+
t = objectArg.Field("@type", string);
|
|
124
|
+
const o = new LDObject((objectArg_1 = get$.Required, objectArg_1.Field("@id", string)), t);
|
|
85
125
|
const enumerator = getEnumerator(properties);
|
|
86
126
|
try {
|
|
87
127
|
while (enumerator["System.Collections.IEnumerator.MoveNext"]()) {
|
|
88
128
|
const property = enumerator["System.Collections.Generic.IEnumerator`1.get_Current"]();
|
|
89
129
|
if ((property !== "@id") && (property !== "@type")) {
|
|
90
|
-
o.SetProperty(property, (arg_5 = decode(), (objectArg_2 = get$.Required, objectArg_2.Field(property, arg_5))));
|
|
130
|
+
o.SetProperty(property, (arg_5 = decode(false), (objectArg_2 = get$.Required, objectArg_2.Field(property, arg_5))));
|
|
91
131
|
}
|
|
92
132
|
}
|
|
93
133
|
}
|
|
@@ -119,7 +159,7 @@ export const decoder = (() => {
|
|
|
119
159
|
if (acc.tag === 0) {
|
|
120
160
|
const acc_1 = acc.fields[0];
|
|
121
161
|
let matchValue_1;
|
|
122
|
-
let copyOfStruct = decode();
|
|
162
|
+
let copyOfStruct = decode(false);
|
|
123
163
|
matchValue_1 = copyOfStruct.Decode(helpers_1, value_2);
|
|
124
164
|
if (matchValue_1.tag === 0) {
|
|
125
165
|
void (acc_1.push(matchValue_1.fields[0]));
|
|
@@ -139,8 +179,17 @@ export const decoder = (() => {
|
|
|
139
179
|
}
|
|
140
180
|
},
|
|
141
181
|
};
|
|
142
|
-
|
|
182
|
+
if (expectObject_1) {
|
|
183
|
+
return map_1((value_4) => value_4, decodeObject);
|
|
184
|
+
}
|
|
185
|
+
else {
|
|
186
|
+
return oneOf(ofArray([map_1((value_5) => value_5, decodeObject), map_1((value_6) => value_6, resizeArray), map_1((value_7) => value_7, string), map_1((value_8) => value_8, int), map_1((value_9) => value_9, decimal)]));
|
|
187
|
+
}
|
|
143
188
|
};
|
|
144
|
-
return decode();
|
|
145
|
-
}
|
|
189
|
+
return decode(expectObject);
|
|
190
|
+
}
|
|
191
|
+
|
|
192
|
+
export const decoder = map_1((value) => value, getDecoder(true));
|
|
193
|
+
|
|
194
|
+
export const genericDecoder = getDecoder(false);
|
|
146
195
|
|
|
@@ -0,0 +1,31 @@
|
|
|
1
|
+
import { fromString } from "../fable_modules/Thoth.Json.JavaScript.0.3.0/Decode.fs.js";
|
|
2
|
+
import { encoder, decoder as decoder_1 } from "../Json/LDObject.js";
|
|
3
|
+
import { printf, toText } from "../fable_modules/fable-library-js.4.22.0/String.js";
|
|
4
|
+
import { toString } from "../fable_modules/Thoth.Json.JavaScript.0.3.0/Encode.fs.js";
|
|
5
|
+
import { defaultSpaces } from "../Json/Encode.js";
|
|
6
|
+
import { unwrap } from "../fable_modules/fable-library-js.4.22.0/Option.js";
|
|
7
|
+
|
|
8
|
+
export function ARCtrl_ROCrate_LDObject__LDObject_fromROCrateJsonString_Static_Z721C83C5(s) {
|
|
9
|
+
const matchValue = fromString(decoder_1, s);
|
|
10
|
+
if (matchValue.tag === 1) {
|
|
11
|
+
throw new Error(toText(printf("Error decoding string: %O"))(matchValue.fields[0]));
|
|
12
|
+
}
|
|
13
|
+
else {
|
|
14
|
+
return matchValue.fields[0];
|
|
15
|
+
}
|
|
16
|
+
}
|
|
17
|
+
|
|
18
|
+
/**
|
|
19
|
+
* exports in json-ld format
|
|
20
|
+
*/
|
|
21
|
+
export function ARCtrl_ROCrate_LDObject__LDObject_toROCrateJsonString_Static_71136F3F(spaces) {
|
|
22
|
+
return (obj) => {
|
|
23
|
+
const value = encoder(obj);
|
|
24
|
+
return toString(defaultSpaces(spaces), value);
|
|
25
|
+
};
|
|
26
|
+
}
|
|
27
|
+
|
|
28
|
+
export function ARCtrl_ROCrate_LDObject__LDObject_ToROCrateJsonString_71136F3F(this$, spaces) {
|
|
29
|
+
return ARCtrl_ROCrate_LDObject__LDObject_toROCrateJsonString_Static_71136F3F(unwrap(spaces))(this$);
|
|
30
|
+
}
|
|
31
|
+
|