@nfdi4plants/arctrl 2.1.0-alpha.3 → 2.2.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/CWL/CWLTypes.js +135 -0
- package/CWL/Decode.js +585 -0
- package/CWL/Inputs.js +62 -0
- package/CWL/Outputs.js +59 -0
- package/CWL/Requirements.js +72 -0
- package/CWL/ToolDescription.js +81 -0
- package/CWL/WorkflowDescription.js +81 -0
- package/CWL/WorkflowSteps.js +98 -0
- package/Core/ArcTypes.js +76 -87
- package/Core/Helper/Identifier.js +2 -2
- package/Core/OntologyAnnotation.js +8 -5
- package/Core/Table/ArcTable.js +15 -7
- package/Core/Table/CompositeHeader.js +4 -0
- package/Core/Template.js +8 -0
- package/Json/{ROCrateObject.js → LDObject.js} +66 -17
- package/JsonIO/LDObject.js +31 -0
- package/ROCrate/ArcROCrateMetadata.js +35 -0
- package/ROCrate/ISAProfile/Assay.js +30 -2
- package/ROCrate/ISAProfile/Data.js +32 -5
- package/ROCrate/ISAProfile/Dataset.js +3 -3
- package/ROCrate/ISAProfile/Investigation.js +30 -2
- package/ROCrate/ISAProfile/LabProcess.js +113 -5
- package/ROCrate/ISAProfile/LabProtocol.js +4 -4
- package/ROCrate/ISAProfile/Person.js +32 -5
- package/ROCrate/ISAProfile/PropertyValue.js +59 -5
- package/ROCrate/ISAProfile/Sample.js +32 -5
- package/ROCrate/ISAProfile/ScholarlyArticle.js +59 -5
- package/ROCrate/ISAProfile/Study.js +30 -2
- package/ROCrate/LDObject.js +105 -0
- package/Spreadsheet/AnnotationTable/ArcTable.js +8 -5
- package/Spreadsheet/Template.js +29 -11
- package/Yaml/ValidationPackage.js +6 -6
- package/Yaml/ValidationPackagesConfig.js +6 -6
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynObj.fs +4 -4
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynObj.fs.js +0 -44
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/HashCodes.fs +4 -1
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/HashCodes.fs.js +8 -3
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Debug/netstandard2.0/DynamicObj.AssemblyInfo.fs +1 -1
- package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Release/netstandard2.0/DynamicObj.AssemblyInfo.fs +3 -3
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Decode.fs +398 -373
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Decode.fs.js +35 -2
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Debug/netstandard2.0/YAMLicious.AssemblyInfo.fs +1 -1
- package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Release/netstandard2.0/YAMLicious.AssemblyInfo.fs +1 -1
- package/fable_modules/project_cracked.json +1 -1
- package/package.json +1 -1
- package/JsonIO/ROCrateObject.js +0 -146
- package/ROCrate/ROCrateObject.js +0 -61
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fableproj +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/DynamicObj.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FableJS.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FableJS.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/FablePy.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/PropertyHelper.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/PropertyHelper.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/ReflectionUtils.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/ReflectionUtils.fs.js +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{DynamicObj.4.0.0 → DynamicObj.4.0.3}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Encode.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Encode.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/JsInterop.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/JsInterop.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Interop/PyInterop.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Library.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Library.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Persil.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Persil.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Preprocessing.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Preprocessing.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Reader.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Reader.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Regex.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Regex.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/RegexActivePatterns.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/RegexActivePatterns.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Writer.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/Writer.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLicious.fableproj +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLiciousTypes.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/YAMLiciousTypes.fs.js +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{YAMLicious.0.0.1 → YAMLicious.0.0.3}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
package/CWL/CWLTypes.js
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import { DynamicObj_$reflection, DynamicObj } from "../fable_modules/DynamicObj.4.0.3/DynamicObj.fs.js";
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import { array_type, union_type, record_type, bool_type, option_type, string_type, class_type } from "../fable_modules/fable-library-js.4.22.0/Reflection.js";
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import { FSharpRef, Union, Record } from "../fable_modules/fable-library-js.4.22.0/Types.js";
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import { defaultOf } from "../fable_modules/fable-library-js.4.22.0/Util.js";
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import { setProperty } from "../fable_modules/DynamicObj.4.0.3/DynObj.fs.js";
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export class FileInstance extends DynamicObj {
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constructor() {
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super();
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}
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}
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export function FileInstance_$reflection() {
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return class_type("ARCtrl.CWL.FileInstance", undefined, FileInstance, DynamicObj_$reflection());
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}
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export function FileInstance_$ctor() {
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return new FileInstance();
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}
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export class DirectoryInstance extends DynamicObj {
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constructor() {
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super();
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}
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}
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export function DirectoryInstance_$reflection() {
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return class_type("ARCtrl.CWL.DirectoryInstance", undefined, DirectoryInstance, DynamicObj_$reflection());
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}
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export function DirectoryInstance_$ctor() {
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return new DirectoryInstance();
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}
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export class DirentInstance extends Record {
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constructor(Entry, Entryname, Writable) {
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super();
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this.Entry = Entry;
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this.Entryname = Entryname;
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this.Writable = Writable;
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}
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}
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export function DirentInstance_$reflection() {
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return record_type("ARCtrl.CWL.DirentInstance", [], DirentInstance, () => [["Entry", string_type], ["Entryname", option_type(string_type)], ["Writable", option_type(bool_type)]]);
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}
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export class CWLType extends Union {
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constructor(tag, fields) {
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super();
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this.tag = tag;
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this.fields = fields;
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}
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cases() {
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return ["File", "Directory", "Dirent", "String", "Int", "Long", "Float", "Double", "Boolean", "Stdout", "Null", "Array"];
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}
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}
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export function CWLType_$reflection() {
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return union_type("ARCtrl.CWL.CWLType", [], CWLType, () => [[["Item", FileInstance_$reflection()]], [["Item", DirectoryInstance_$reflection()]], [["Item", DirentInstance_$reflection()]], [], [], [], [], [], [], [], [], [["Item", CWLType_$reflection()]]]);
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}
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export class InputRecordSchema extends DynamicObj {
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constructor() {
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super();
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}
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}
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export function InputRecordSchema_$reflection() {
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return class_type("ARCtrl.CWL.InputRecordSchema", undefined, InputRecordSchema, DynamicObj_$reflection());
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}
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export function InputRecordSchema_$ctor() {
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return new InputRecordSchema();
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}
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export class InputEnumSchema extends DynamicObj {
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constructor() {
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super();
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}
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}
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export function InputEnumSchema_$reflection() {
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return class_type("ARCtrl.CWL.InputEnumSchema", undefined, InputEnumSchema, DynamicObj_$reflection());
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}
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export function InputEnumSchema_$ctor() {
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return new InputEnumSchema();
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}
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export class InputArraySchema extends DynamicObj {
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constructor() {
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super();
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}
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}
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export function InputArraySchema_$reflection() {
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return class_type("ARCtrl.CWL.InputArraySchema", undefined, InputArraySchema, DynamicObj_$reflection());
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}
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export function InputArraySchema_$ctor() {
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return new InputArraySchema();
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}
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export class SchemaDefRequirementType extends DynamicObj {
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constructor(types, definitions) {
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super();
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const this$ = new FSharpRef(defaultOf());
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this$.contents = this;
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this["init@47"] = 1;
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setProperty("types", definitions, this$.contents);
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}
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}
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export function SchemaDefRequirementType_$reflection() {
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return class_type("ARCtrl.CWL.SchemaDefRequirementType", undefined, SchemaDefRequirementType, DynamicObj_$reflection());
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}
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export function SchemaDefRequirementType_$ctor_541DA560(types, definitions) {
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return new SchemaDefRequirementType(types, definitions);
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}
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export class SoftwarePackage extends Record {
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constructor(Package, Version, Specs) {
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super();
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this.Package = Package;
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this.Version = Version;
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this.Specs = Specs;
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}
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}
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export function SoftwarePackage_$reflection() {
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return record_type("ARCtrl.CWL.SoftwarePackage", [], SoftwarePackage, () => [["Package", string_type], ["Version", option_type(array_type(string_type))], ["Specs", option_type(array_type(string_type))]]);
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}
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