@nfdi4plants/arctrl 2.0.0-alpha.2 → 2.0.0-alpha.4
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/ARC.js +110 -15
- package/Contract/ARC.js +9 -1
- package/Contract/Datamap.js +180 -0
- package/Core/ArcTypes.js +148 -121
- package/Core/Conversion.js +99 -67
- package/Core/Data.js +119 -0
- package/Core/{Process/DataFile.js → DataFile.js} +3 -3
- package/Core/Helper/Identifier.js +40 -0
- package/Core/OntologyAnnotation.js +14 -4
- package/Core/Process/ColumnIndex.js +13 -3
- package/Core/Process/ProcessInput.js +5 -5
- package/Core/Process/ProcessOutput.js +5 -5
- package/Core/Process/Value.js +1 -1
- package/Core/Table/ArcTableAux.js +14 -3
- package/Core/Table/CompositeCell.js +67 -10
- package/Core/Table/CompositeColumn.js +9 -0
- package/Core/Table/CompositeHeader.js +58 -68
- package/Core/Table/DataMap.js +166 -0
- package/FileSystem/FileSystemTree.js +18 -4
- package/Json/Assay.js +4 -4
- package/Json/Process/Data.js +56 -18
- package/Json/Process/DataFile.js +5 -5
- package/Json/Process/PropertyValue.js +126 -5
- package/Json/Study.js +6 -6
- package/Json/Table/CompositeCell.js +7 -6
- package/Spreadsheet/AnnotationTable/ArcTable.js +9 -13
- package/Spreadsheet/AnnotationTable/CompositeCell.js +32 -50
- package/Spreadsheet/AnnotationTable/CompositeColumn.js +16 -10
- package/Spreadsheet/AnnotationTable/CompositeHeader.js +262 -143
- package/Spreadsheet/ArcAssay.js +2 -2
- package/Spreadsheet/ArcInvestigation.js +2 -2
- package/Spreadsheet/ArcStudy.js +2 -2
- package/Spreadsheet/DataMap.js +31 -0
- package/Spreadsheet/DataMapTable/DataMapColumn.js +36 -0
- package/Spreadsheet/DataMapTable/DataMapHeader.js +417 -0
- package/Spreadsheet/DataMapTable/DataMapTable.js +98 -0
- package/Spreadsheet/Metadata/Assays.js +2 -2
- package/Spreadsheet/Metadata/SparseTable.js +7 -7
- package/Spreadsheet/Metadata/Study.js +1 -1
- package/Spreadsheet/Template.js +2 -2
- package/Xlsx.js +29 -6
- package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsSpreadsheet.fableproj +9 -3
- package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsWorksheet.fs +1 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Cell.fs +23 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Cell.fs.js +21 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Row.fs +23 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Row.fs.js +19 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Table.fs +24 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Table.fs.js +15 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Value.fs +70 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Value.fs.js +48 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Workbook.fs +20 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Workbook.fs.js +21 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Worksheet.fs +49 -0
- package/fable_modules/FsSpreadsheet.6.1.2/Json/Worksheet.fs.js +44 -0
- package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/obj/Release/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs +3 -3
- package/fable_modules/project_cracked.json +1 -1
- package/package.json +1 -1
- package/Core/Process/Data.js +0 -55
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Cells/FsCell.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Cells/FsCell.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Cells/FsCellsCollection.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Cells/FsCellsCollection.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/CellBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/CellBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/ColumnBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/ColumnBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/DSL.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/DSL.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Expression.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Expression.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Operators.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Operators.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/RowBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/RowBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/SheetBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/SheetBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/TableBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/TableBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Transform.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Transform.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Types.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/Types.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/WorkbookBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/DSL/WorkbookBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsAddress.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsAddress.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsColumn.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsColumn.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsRow.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsRow.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsWorkbook.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsWorkbook.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/FsWorksheet.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRange.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRange.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeAddress.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeAddress.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeBase.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeBase.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeColumn.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeColumn.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeRow.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Ranges/FsRangeRow.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/SheetBuilder.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/SheetBuilder.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Tables/FsTable.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Tables/FsTable.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Tables/FsTableField.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Tables/FsTableField.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Tables/FsTableRow.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/Tables/FsTableRow.fs.js +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/obj/Debug/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/obj/Debug/netstandard2.0/FsSpreadsheet.AssemblyInfo.fs +0 -0
- /package/fable_modules/{FsSpreadsheet.5.1.3 → FsSpreadsheet.6.1.2}/obj/Release/netstandard2.0/.NETStandard,Version=v2.0.AssemblyAttributes.fs +0 -0
|
@@ -2,14 +2,14 @@ import { CompositeHeader, IOType } from "../../Core/Table/CompositeHeader.js";
|
|
|
2
2
|
import { toString } from "../../fable_modules/fable-library-js.4.16.0/Types.js";
|
|
3
3
|
import { toFsCells, fromFsCells } from "./CompositeHeader.js";
|
|
4
4
|
import { singleton as singleton_1, ofArray, item, map } from "../../fable_modules/fable-library-js.4.16.0/List.js";
|
|
5
|
-
import { FsAddress__get_RowNumber } from "../../fable_modules/FsSpreadsheet.
|
|
6
|
-
import { FsRangeAddress__get_LastAddress } from "../../fable_modules/FsSpreadsheet.
|
|
7
|
-
import { FsRangeBase__get_RangeAddress } from "../../fable_modules/FsSpreadsheet.
|
|
8
|
-
import { singleton, append, toList, exists, map as map_1, delay, toArray } from "../../fable_modules/fable-library-js.4.16.0/Seq.js";
|
|
9
|
-
import { toFsCells as toFsCells_1, fromFsCells as fromFsCells_1 } from "./CompositeCell.js";
|
|
5
|
+
import { FsAddress__get_RowNumber } from "../../fable_modules/FsSpreadsheet.6.1.2/FsAddress.fs.js";
|
|
6
|
+
import { FsRangeAddress__get_LastAddress } from "../../fable_modules/FsSpreadsheet.6.1.2/Ranges/FsRangeAddress.fs.js";
|
|
7
|
+
import { FsRangeBase__get_RangeAddress } from "../../fable_modules/FsSpreadsheet.6.1.2/Ranges/FsRangeBase.fs.js";
|
|
8
|
+
import { empty, singleton, append, toList, exists, map as map_1, delay, toArray } from "../../fable_modules/fable-library-js.4.16.0/Seq.js";
|
|
10
9
|
import { rangeDouble } from "../../fable_modules/fable-library-js.4.16.0/Range.js";
|
|
11
10
|
import { CompositeColumn } from "../../Core/Table/CompositeColumn.js";
|
|
12
11
|
import { item as item_1, map as map_2 } from "../../fable_modules/fable-library-js.4.16.0/Array.js";
|
|
12
|
+
import { toFsCells as toFsCells_1 } from "./CompositeCell.js";
|
|
13
13
|
|
|
14
14
|
/**
|
|
15
15
|
* Checks if the column header is a deprecated IO Header. If so, fixes it.
|
|
@@ -21,7 +21,7 @@ import { item as item_1, map as map_2 } from "../../fable_modules/fable-library-
|
|
|
21
21
|
export function fixDeprecatedIOHeader(col) {
|
|
22
22
|
const matchValue = IOType.ofString(col.Item(1).ValueAsString());
|
|
23
23
|
switch (matchValue.tag) {
|
|
24
|
-
case
|
|
24
|
+
case 4:
|
|
25
25
|
return col;
|
|
26
26
|
case 0: {
|
|
27
27
|
col.Item(1).SetValueAs(toString(new CompositeHeader(11, [new IOType(0, [])])));
|
|
@@ -35,15 +35,16 @@ export function fixDeprecatedIOHeader(col) {
|
|
|
35
35
|
}
|
|
36
36
|
|
|
37
37
|
export function fromFsColumns(columns) {
|
|
38
|
-
const
|
|
38
|
+
const patternInput = fromFsCells(map((c) => c.Item(1), columns));
|
|
39
39
|
const l = FsAddress__get_RowNumber(FsRangeAddress__get_LastAddress(FsRangeBase__get_RangeAddress(item(0, columns)))) | 0;
|
|
40
|
-
const
|
|
41
|
-
return CompositeColumn.create(
|
|
40
|
+
const cells_1 = toArray(delay(() => map_1((i) => patternInput[1](map((c_1) => c_1.Item(i), columns)), rangeDouble(2, 1, l))));
|
|
41
|
+
return CompositeColumn.create(patternInput[0], cells_1);
|
|
42
42
|
}
|
|
43
43
|
|
|
44
44
|
export function toFsColumns(column) {
|
|
45
45
|
const hasUnit = exists((c) => c.isUnitized, column.Cells);
|
|
46
46
|
const isTerm = column.Header.IsTermColumn;
|
|
47
|
+
const isData = column.Header.IsDataColumn;
|
|
47
48
|
const header = toFsCells(hasUnit, column.Header);
|
|
48
49
|
const cells = map_2((cell) => toFsCells_1(isTerm, hasUnit, cell), column.Cells);
|
|
49
50
|
if (hasUnit) {
|
|
@@ -52,8 +53,13 @@ export function toFsColumns(column) {
|
|
|
52
53
|
else if (isTerm) {
|
|
53
54
|
return ofArray([toList(delay(() => append(singleton(item(0, header)), delay(() => map_1((i_4) => item(0, item_1(i_4, cells)), rangeDouble(0, 1, column.Cells.length - 1)))))), toList(delay(() => append(singleton(item(1, header)), delay(() => map_1((i_5) => item(1, item_1(i_5, cells)), rangeDouble(0, 1, column.Cells.length - 1)))))), toList(delay(() => append(singleton(item(2, header)), delay(() => map_1((i_6) => item(2, item_1(i_6, cells)), rangeDouble(0, 1, column.Cells.length - 1))))))]);
|
|
54
55
|
}
|
|
56
|
+
else if (isData) {
|
|
57
|
+
const hasFormat = exists((c_1) => (c_1.AsData.Format != null), column.Cells);
|
|
58
|
+
const hasSelectorFormat = exists((c_2) => (c_2.AsData.SelectorFormat != null), column.Cells);
|
|
59
|
+
return toList(delay(() => append(singleton(toList(delay(() => append(singleton(item(0, header)), delay(() => map_1((i_7) => item(0, item_1(i_7, cells)), rangeDouble(0, 1, column.Cells.length - 1))))))), delay(() => append(hasFormat ? singleton(toList(delay(() => append(singleton(item(1, header)), delay(() => map_1((i_8) => item(1, item_1(i_8, cells)), rangeDouble(0, 1, column.Cells.length - 1))))))) : empty(), delay(() => (hasSelectorFormat ? singleton(toList(delay(() => append(singleton(item(2, header)), delay(() => map_1((i_9) => item(2, item_1(i_9, cells)), rangeDouble(0, 1, column.Cells.length - 1))))))) : empty())))))));
|
|
60
|
+
}
|
|
55
61
|
else {
|
|
56
|
-
return singleton_1(toList(delay(() => append(singleton(item(0, header)), delay(() => map_1((
|
|
62
|
+
return singleton_1(toList(delay(() => append(singleton(item(0, header)), delay(() => map_1((i_10) => item(0, item_1(i_10, cells)), rangeDouble(0, 1, column.Cells.length - 1)))))));
|
|
57
63
|
}
|
|
58
64
|
}
|
|
59
65
|
|