@nahisaho/satori 0.25.5 → 0.27.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/README.md +57 -1
- package/bin/satori.js +761 -33
- package/package.json +32 -2
- package/src/.github/skills/scientific-academic-writing/SKILL.md +10 -0
- package/src/.github/skills/scientific-active-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-adaptive-experiments/SKILL.md +10 -0
- package/src/.github/skills/scientific-advanced-imaging/SKILL.md +10 -0
- package/src/.github/skills/scientific-advanced-visualization/SKILL.md +10 -0
- package/src/.github/skills/scientific-anomaly-detection/SKILL.md +10 -0
- package/src/.github/skills/scientific-automl/SKILL.md +10 -0
- package/src/.github/skills/scientific-bayesian-statistics/SKILL.md +10 -0
- package/src/.github/skills/scientific-biobank-cohort/SKILL.md +10 -0
- package/src/.github/skills/scientific-biosignal-processing/SKILL.md +10 -0
- package/src/.github/skills/scientific-causal-inference/SKILL.md +10 -0
- package/src/.github/skills/scientific-causal-ml/SKILL.md +10 -0
- package/src/.github/skills/scientific-clinical-nlp/SKILL.md +10 -0
- package/src/.github/skills/scientific-clinical-pharmacology/SKILL.md +10 -0
- package/src/.github/skills/scientific-clinical-standards/SKILL.md +11 -0
- package/src/.github/skills/scientific-crispr-design/SKILL.md +10 -0
- package/src/.github/skills/scientific-critical-review/SKILL.md +10 -1
- package/src/.github/skills/scientific-data-preprocessing/SKILL.md +10 -0
- package/src/.github/skills/scientific-data-profiling/SKILL.md +10 -0
- package/src/.github/skills/scientific-data-simulation/SKILL.md +10 -0
- package/src/.github/skills/scientific-data-submission/SKILL.md +10 -0
- package/src/.github/skills/scientific-deep-chemistry/SKILL.md +10 -0
- package/src/.github/skills/scientific-deep-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-doe/SKILL.md +10 -0
- package/src/.github/skills/scientific-eda-correlation/SKILL.md +10 -0
- package/src/.github/skills/scientific-ensemble-methods/SKILL.md +10 -0
- package/src/.github/skills/scientific-explainable-ai/SKILL.md +10 -0
- package/src/.github/skills/scientific-feature-importance/SKILL.md +10 -0
- package/src/.github/skills/scientific-federated-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-geospatial-analysis/SKILL.md +10 -0
- package/src/.github/skills/scientific-glycomics/SKILL.md +10 -0
- package/src/.github/skills/scientific-gpu-singlecell/SKILL.md +10 -0
- package/src/.github/skills/scientific-hgnc-nomenclature/SKILL.md +10 -0
- package/src/.github/skills/scientific-hypothesis-pipeline/SKILL.md +10 -1
- package/src/.github/skills/scientific-image-analysis/SKILL.md +10 -0
- package/src/.github/skills/scientific-interactive-dashboard/SKILL.md +10 -0
- package/src/.github/skills/scientific-lab-automation/SKILL.md +10 -0
- package/src/.github/skills/scientific-latex-formatter/SKILL.md +10 -0
- package/src/.github/skills/scientific-lipidomics/SKILL.md +10 -0
- package/src/.github/skills/scientific-materials-characterization/SKILL.md +10 -0
- package/src/.github/skills/scientific-md-simulation/SKILL.md +10 -0
- package/src/.github/skills/scientific-medical-imaging/SKILL.md +10 -0
- package/src/.github/skills/scientific-metabolic-atlas/SKILL.md +11 -0
- package/src/.github/skills/scientific-metabolic-flux/SKILL.md +10 -0
- package/src/.github/skills/scientific-metabolomics-network/SKILL.md +10 -0
- package/src/.github/skills/scientific-metagenome-assembled-genomes/SKILL.md +10 -0
- package/src/.github/skills/scientific-missing-data-analysis/SKILL.md +10 -0
- package/src/.github/skills/scientific-ml-classification/SKILL.md +10 -0
- package/src/.github/skills/scientific-ml-regression/SKILL.md +10 -0
- package/src/.github/skills/scientific-model-monitoring/SKILL.md +10 -0
- package/src/.github/skills/scientific-multi-task-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-nci60-screening/SKILL.md +10 -0
- package/src/.github/skills/scientific-network-visualization/SKILL.md +10 -0
- package/src/.github/skills/scientific-neural-architecture-search/SKILL.md +10 -0
- package/src/.github/skills/scientific-neuroscience-electrophysiology/SKILL.md +10 -0
- package/src/.github/skills/scientific-paper-quality/SKILL.md +10 -0
- package/src/.github/skills/scientific-pca-tsne/SKILL.md +10 -0
- package/src/.github/skills/scientific-peer-review-response/SKILL.md +10 -0
- package/src/.github/skills/scientific-perturbation-analysis/SKILL.md +10 -0
- package/src/.github/skills/scientific-phylogenetics/SKILL.md +10 -0
- package/src/.github/skills/scientific-pipeline-scaffold/SKILL.md +10 -0
- package/src/.github/skills/scientific-plant-biology/SKILL.md +10 -0
- package/src/.github/skills/scientific-presentation-design/SKILL.md +10 -0
- package/src/.github/skills/scientific-process-optimization/SKILL.md +10 -0
- package/src/.github/skills/scientific-publication-figures/SKILL.md +10 -0
- package/src/.github/skills/scientific-quantum-computing/SKILL.md +10 -0
- package/src/.github/skills/scientific-radiology-ai/SKILL.md +10 -0
- package/src/.github/skills/scientific-reinforcement-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-reproducible-reporting/SKILL.md +10 -0
- package/src/.github/skills/scientific-research-methodology/SKILL.md +10 -0
- package/src/.github/skills/scientific-revision-tracker/SKILL.md +10 -0
- package/src/.github/skills/scientific-scatac-signac/SKILL.md +10 -0
- package/src/.github/skills/scientific-scvi-integration/SKILL.md +10 -0
- package/src/.github/skills/scientific-semi-supervised-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-spatial-multiomics/SKILL.md +10 -0
- package/src/.github/skills/scientific-spectral-signal/SKILL.md +10 -0
- package/src/.github/skills/scientific-squidpy-advanced/SKILL.md +11 -0
- package/src/.github/skills/scientific-statistical-simulation/SKILL.md +10 -0
- package/src/.github/skills/scientific-statistical-testing/SKILL.md +10 -0
- package/src/.github/skills/scientific-streaming-analytics/SKILL.md +10 -0
- package/src/.github/skills/scientific-supplementary-generator/SKILL.md +10 -0
- package/src/.github/skills/scientific-symbolic-mathematics/SKILL.md +10 -0
- package/src/.github/skills/scientific-time-series/SKILL.md +10 -0
- package/src/.github/skills/scientific-time-series-forecasting/SKILL.md +10 -0
- package/src/.github/skills/scientific-toxicology-env/SKILL.md +10 -0
- package/src/.github/skills/scientific-transfer-learning/SKILL.md +10 -0
- package/src/.github/skills/scientific-uncertainty-quantification/SKILL.md +10 -0
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毒性学・環境衛生スキル。CTD (Comparative Toxicogenomics Database)
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化学-遺伝子-疾患関連・ToxCast/Tox21 高スループット毒性スクリーニング・
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IRIS ヒトリスク評価・T3DB 食品/環境毒性物質・PubChem BioAssay 毒性データ。
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---
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# Scientific Toxicology & Environmental Health
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| `results/ctd_disease_associations.csv` | CTD 化学-疾患関連 | → disease-research |
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| `results/tox21_assays.csv` | Tox21/ToxCast アッセイ結果 | → admet-pharmacokinetics |
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| `results/toxicity_pathways.json` | 毒性パスウェイ解析結果 | → pharmacovigilance |
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| `ctd` | CTD | 化学物質-疾患-遺伝子関連データ検索 |
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転移学習・ドメイン適応スキル。事前学習モデルファインチューニング・
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Few-shot / Zero-shot 学習・ドメイン適応 (DA)・
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# Scientific Transfer Learning
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| `ft_model.pt` | ファインチューニング済みモデル | → 推論 |
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| `ft_history.csv` | 学習履歴 | → visualization |
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| `few_shot_predictions.csv` | Few-shot 予測 | → 評価 |
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| `papers_with_code` | Papers with Code | 転移学習モデル・事前学習済みモデル検索 |
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不確実性定量化スキル。Conformal Prediction・MC Dropout・
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深層アンサンブル・アレアトリック / エピステミック分離・
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# Scientific Uncertainty Quantification
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| `calibration_analysis.png` | 校正曲線 | → presentation |
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| `uncertainty_decomposition.json` | 分離結果 | → explainable-ai |
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| `papers_with_code` | Papers with Code | 不確実性定量化手法・ベンチマーク |
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