@mycelish/cli 0.1.0

package/dist/commands/remote.js

@@ -0,0 +1,212 @@
+/**
+ * Remote commands — mycelium push, pull, env
+ */
+import * as path from "node:path";
+import { Command } from "commander";
+import { execFileSync } from "node:child_process";
+import { expandPath } from "@mycelish/core";
+import { ensureGitignore, generateEnvTemplate, getMissingEnvVars } from "../core/env-template.js";
+import { detectMcpOverrides, loadMachineOverrides, saveMachineOverrides, rescanOverrides } from "../core/machine-overrides.js";
+import { readFileIfExists, mkdirp } from "../core/fs-helpers.js";
+import * as fs from "node:fs/promises";
+const MYCELIUM_DIR = expandPath("~/.mycelium");
+// ============================================================================
+// Helpers
+// ============================================================================
+function git(...args) {
+    return execFileSync("git", ["-C", MYCELIUM_DIR, ...args], { encoding: "utf-8" }).trim();
+}
+// ============================================================================
+// Push
+// ============================================================================
+export const pushCommand = new Command("push")
+    .description("Commit and push ~/.mycelium to remote")
+    .option("-m, --message <msg>", "Custom commit message")
+    .action(async (options) => {
+    try {
+        await ensureGitignore();
+        const keys = await generateEnvTemplate();
+        if (keys.length > 0) {
+            console.log(`Updated .env.template with ${keys.length} keys`);
+        }
+        git("add", "-A");
+        const msg = options.message ?? `mycelium push: ${new Date().toISOString()}`;
+        try {
+            execFileSync("git", ["-C", MYCELIUM_DIR, "commit", "-m", msg], { encoding: "utf-8" });
+        }
+        catch {
+            console.log("Nothing to commit — already up to date.");
+            return;
+        }
+        git("push");
+        console.log("Pushed ~/.mycelium to remote.");
+    }
+    catch (err) {
+        console.error("Push failed:", err instanceof Error ? err.message : String(err));
+        process.exit(1);
+    }
+});
+// ============================================================================
+// Pull
+// ============================================================================
+export const pullCommand = new Command("pull")
+    .description("Pull ~/.mycelium from remote and auto-sync")
+    .option("--repo <url>", "Clone from repo URL if ~/.mycelium doesn't exist")
+    .option("--no-sync", "Skip auto-sync after pull")
+    .option("--rescan", "Force re-detect machine overrides")
+    .action(async (options) => {
+    try {
+        // If --repo provided and no local config, clone first
+        if (options.repo) {
+            const exists = await readFileIfExists(path.join(MYCELIUM_DIR, "manifest.yaml"));
+            if (!exists) {
+                console.log(`Cloning from ${options.repo}...`);
+                execFileSync("git", ["clone", options.repo, MYCELIUM_DIR], { stdio: "pipe" });
+                console.log("Config cloned.");
+            }
+        }
+        let output;
+        try {
+            output = git("pull");
+            console.log(output);
+        }
+        catch {
+            // Not a git repo — skip pull
+            console.log("No git remote configured. Skipping pull.");
+        }
+        // Check missing env vars
+        const missing = await getMissingEnvVars();
+        if (missing.length > 0) {
+            console.warn(`\nMissing env vars: ${missing.join(", ")}`);
+            console.warn("Run: mycelium env setup");
+        }
+        // Detect machine overrides
+        const mcpsPath = path.join(MYCELIUM_DIR, "mcps.yaml");
+        const mcpsContent = await readFileIfExists(mcpsPath);
+        if (mcpsContent) {
+            // Simple extraction of command fields from mcps.yaml
+            const mcps = parseMcpsForOverrides(mcpsContent);
+            if (options.rescan) {
+                const overrides = await rescanOverrides(mcps);
+                for (const [name, entry] of Object.entries(overrides.mcps)) {
+                    console.log(`Auto-detected: ${name} at ${entry.command}`);
+                }
+            }
+            else {
+                const detected = detectMcpOverrides(mcps);
+                if (detected.length > 0) {
+                    const existing = await loadMachineOverrides();
+                    const now = new Date().toISOString();
+                    for (const d of detected) {
+                        existing.mcps[d.name] = { command: d.newCommand, detectedAt: now };
+                        console.log(`Auto-detected: ${d.name} at ${d.newCommand}`);
+                    }
+                    existing.updatedAt = now;
+                    await saveMachineOverrides(existing);
+                }
+            }
+        }
+        // Auto-sync
+        if (options.sync !== false) {
+            console.log("\nRunning sync...");
+            // Dynamic import to avoid circular deps
+            const { syncCommand: sc } = await import("./sync.js");
+            sc.parseAsync(["sync"], { from: "user" }).catch(() => { });
+        }
+    }
+    catch (err) {
+        console.error("Pull failed:", err instanceof Error ? err.message : String(err));
+        process.exit(1);
+    }
+});
+// ============================================================================
+// Env
+// ============================================================================
+export const envCommand = new Command("env")
+    .description("Manage environment variables");
+envCommand
+    .command("setup")
+    .description("Create .env.local template for missing vars")
+    .action(async () => {
+    const missing = await getMissingEnvVars();
+    if (missing.length === 0) {
+        console.log("All env vars are set.");
+        return;
+    }
+    const localPath = path.join(MYCELIUM_DIR, ".env.local");
+    const existing = await readFileIfExists(localPath);
+    const existingLines = existing ? existing.split("\n") : [];
+    const existingKeys = new Set(existingLines
+        .filter((l) => l.includes("="))
+        .map((l) => l.split("=")[0].trim()));
+    const newLines = missing
+        .filter((k) => !existingKeys.has(k))
+        .map((k) => `${k}=`);
+    if (newLines.length > 0) {
+        await mkdirp(MYCELIUM_DIR);
+        const sep = existing && !existing.endsWith("\n") ? "\n" : "";
+        await fs.writeFile(localPath, (existing ?? "") + sep + newLines.join("\n") + "\n", "utf-8");
+    }
+    console.log(`Missing vars added to .env.local: ${missing.join(", ")}`);
+    console.log(`Edit ${localPath} and fill in the values.`);
+});
+envCommand
+    .command("list")
+    .description("Show all env vars and their status")
+    .action(async () => {
+    const templatePath = path.join(MYCELIUM_DIR, ".env.template");
+    const localPath = path.join(MYCELIUM_DIR, ".env.local");
+    const templateContent = await readFileIfExists(templatePath);
+    if (!templateContent) {
+        console.log("No .env.template found. Run: mycelium push");
+        return;
+    }
+    const localContent = await readFileIfExists(localPath);
+    const localPairs = {};
+    if (localContent) {
+        for (const line of localContent.split("\n")) {
+            const trimmed = line.trim();
+            if (!trimmed || trimmed.startsWith("#"))
+                continue;
+            const eq = trimmed.indexOf("=");
+            if (eq === -1)
+                continue;
+            localPairs[trimmed.slice(0, eq).trim()] = trimmed.slice(eq + 1).trim();
+        }
+    }
+    for (const line of templateContent.split("\n")) {
+        const trimmed = line.trim();
+        if (!trimmed || trimmed.startsWith("#"))
+            continue;
+        const eq = trimmed.indexOf("=");
+        if (eq === -1)
+            continue;
+        const key = trimmed.slice(0, eq).trim();
+        const val = localPairs[key];
+        const status = val ? "set" : "missing";
+        const icon = val ? "\u2713" : "\u2717";
+        console.log(`  ${icon} ${key}: ${status}`);
+    }
+});
+// ============================================================================
+// Helper: parse mcps.yaml command fields for override detection
+// ============================================================================
+function parseMcpsForOverrides(content) {
+    const result = {};
+    let currentName = "";
+    for (const line of content.split("\n")) {
+        const trimmed = line.trim();
+        if (!trimmed || trimmed.startsWith("#"))
+            continue;
+        // Top-level key (no indentation)
+        if (!line.startsWith(" ") && trimmed.endsWith(":") && !trimmed.includes(" ")) {
+            currentName = trimmed.slice(0, -1);
+        }
+        else if (currentName && trimmed.startsWith("command:")) {
+            result[currentName] = { command: trimmed.slice("command:".length).trim() };
+        }
+    }
+    return result;
+}
+export { parseMcpsForOverrides as _parseMcpsForOverrides };
+//# sourceMappingURL=remote.js.map

package/dist/commands/remote.js.map

@@ -0,0 +1 @@
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package/dist/commands/remote.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=remote.test.d.ts.map

package/dist/commands/remote.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"remote.test.d.ts","sourceRoot":"","sources":["../../src/commands/remote.test.ts"],"names":[],"mappings":""}

package/dist/commands/remote.test.js

@@ -0,0 +1,125 @@
+import { describe, it, expect, vi, beforeEach } from "vitest";
+vi.mock("node:child_process", () => ({
+    execSync: vi.fn(),
+    execFileSync: vi.fn(),
+}));
+vi.mock("node:fs/promises", () => ({
+    readFile: vi.fn(),
+    writeFile: vi.fn(),
+    mkdir: vi.fn(),
+}));
+vi.mock("../core/env-template.js", () => ({
+    ensureGitignore: vi.fn().mockResolvedValue(undefined),
+    generateEnvTemplate: vi.fn().mockResolvedValue(["API_KEY", "SECRET"]),
+    getMissingEnvVars: vi.fn().mockResolvedValue([]),
+    setupEnvVars: vi.fn().mockResolvedValue(undefined),
+}));
+vi.mock("../core/machine-overrides.js", () => ({
+    detectMcpOverrides: vi.fn().mockReturnValue([]),
+    loadMachineOverrides: vi.fn().mockResolvedValue({ hostname: "test", detectedAt: "", updatedAt: "", mcps: {} }),
+    saveMachineOverrides: vi.fn().mockResolvedValue(undefined),
+    rescanOverrides: vi.fn().mockResolvedValue({ hostname: "test", detectedAt: "", updatedAt: "", mcps: {} }),
+}));
+vi.mock("../core/fs-helpers.js", () => ({
+    readFileIfExists: vi.fn().mockResolvedValue(null),
+    mkdirp: vi.fn().mockResolvedValue(undefined),
+}));
+import { execFileSync } from "node:child_process";
+import * as fs from "node:fs/promises";
+import { ensureGitignore, generateEnvTemplate, getMissingEnvVars } from "../core/env-template.js";
+import { detectMcpOverrides, saveMachineOverrides } from "../core/machine-overrides.js";
+import { readFileIfExists } from "../core/fs-helpers.js";
+import { pushCommand, pullCommand, envCommand, _parseMcpsForOverrides } from "./remote.js";
+const mockedExecFileSync = execFileSync;
+const mockedReadFile = readFileIfExists;
+const mockedWriteFile = fs.writeFile;
+const mockedGetMissing = getMissingEnvVars;
+const mockedDetect = detectMcpOverrides;
+beforeEach(() => {
+    vi.clearAllMocks();
+    mockedWriteFile.mockResolvedValue(undefined);
+});
+describe("pushCommand", () => {
+    it("calls ensureGitignore, generateEnvTemplate, and git commands", async () => {
+        mockedExecFileSync.mockReturnValue("");
+        await pushCommand.parseAsync([], { from: "user" });
+        expect(ensureGitignore).toHaveBeenCalled();
+        expect(generateEnvTemplate).toHaveBeenCalled();
+        const gitCalls = mockedExecFileSync.mock.calls.map((c) => c[1]);
+        expect(gitCalls.some((args) => args.includes("add"))).toBe(true);
+        expect(gitCalls.some((args) => args.includes("push"))).toBe(true);
+        expect(gitCalls.some((args) => args.includes("commit"))).toBe(true);
+    });
+    it("uses custom commit message when provided", async () => {
+        mockedExecFileSync.mockReturnValue("");
+        await pushCommand.parseAsync(["-m", "my custom msg"], { from: "user" });
+        const commitCall = mockedExecFileSync.mock.calls.find((c) => c[1].includes("commit"));
+        expect(commitCall).toBeDefined();
+        expect(commitCall[1].includes("my custom msg")).toBe(true);
+    });
+});
+describe("pullCommand", () => {
+    it("calls git pull and checks missing vars", async () => {
+        mockedExecFileSync.mockReturnValue("Already up to date.");
+        mockedReadFile.mockResolvedValue(null);
+        await pullCommand.parseAsync(["--no-sync"], { from: "user" });
+        const calls = mockedExecFileSync.mock.calls.map((c) => c[1]);
+        expect(calls.some((args) => args.includes("pull"))).toBe(true);
+    });
+    it("warns about missing env vars", async () => {
+        mockedExecFileSync.mockReturnValue("Already up to date.");
+        mockedReadFile.mockResolvedValue(null);
+        mockedGetMissing.mockResolvedValue(["API_KEY", "SECRET"]);
+        const consoleSpy = vi.spyOn(console, "warn").mockImplementation(() => { });
+        await pullCommand.parseAsync(["--no-sync"], { from: "user" });
+        expect(consoleSpy.mock.calls.some((c) => String(c[0]).includes("Missing env vars"))).toBe(true);
+        consoleSpy.mockRestore();
+    });
+    it("detects machine overrides when mcps.yaml exists", async () => {
+        mockedExecFileSync.mockReturnValue("Updated.");
+        mockedReadFile.mockResolvedValue("server:\n  command: /usr/bin/node\n");
+        mockedDetect.mockReturnValue([{ name: "server", oldCommand: "/usr/bin/node", newCommand: "/opt/bin/node" }]);
+        const consoleSpy = vi.spyOn(console, "log").mockImplementation(() => { });
+        await pullCommand.parseAsync(["--no-sync"], { from: "user" });
+        expect(saveMachineOverrides).toHaveBeenCalled();
+        consoleSpy.mockRestore();
+    });
+});
+describe("envCommand setup", () => {
+    it("creates .env.local with missing vars", async () => {
+        mockedGetMissing.mockResolvedValue(["API_KEY", "SECRET"]);
+        mockedReadFile.mockResolvedValue(null);
+        const consoleSpy = vi.spyOn(console, "log").mockImplementation(() => { });
+        await envCommand.parseAsync(["setup"], { from: "user" });
+        expect(mockedWriteFile).toHaveBeenCalledWith(expect.stringContaining(".env.local"), expect.stringContaining("API_KEY="), "utf-8");
+        consoleSpy.mockRestore();
+    });
+    it("prints all-set when no missing vars", async () => {
+        mockedGetMissing.mockResolvedValue([]);
+        const consoleSpy = vi.spyOn(console, "log").mockImplementation(() => { });
+        await envCommand.parseAsync(["setup"], { from: "user" });
+        expect(consoleSpy).toHaveBeenCalledWith("All env vars are set.");
+        consoleSpy.mockRestore();
+    });
+});
+describe("envCommand list", () => {
+    it("shows status of vars correctly", async () => {
+        mockedReadFile
+            .mockResolvedValueOnce("API_KEY=\nSECRET=\n") // template
+            .mockResolvedValueOnce("API_KEY=abc123\n"); // local
+        const consoleSpy = vi.spyOn(console, "log").mockImplementation(() => { });
+        await envCommand.parseAsync(["list"], { from: "user" });
+        const output = consoleSpy.mock.calls.map((c) => String(c[0])).join("\n");
+        expect(output).toContain("API_KEY");
+        consoleSpy.mockRestore();
+    });
+});
+describe("_parseMcpsForOverrides", () => {
+    it("extracts command fields from mcps.yaml", () => {
+        const yaml = "server:\n  command: /usr/bin/node\n  args:\n    - serve\nother:\n  command: /usr/bin/python\n";
+        const result = _parseMcpsForOverrides(yaml);
+        expect(result.server.command).toBe("/usr/bin/node");
+        expect(result.other.command).toBe("/usr/bin/python");
+    });
+});
+//# sourceMappingURL=remote.test.js.map

package/dist/commands/remote.test.js.map

@@ -0,0 +1 @@
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package/dist/commands/remove.d.ts

@@ -0,0 +1,34 @@
+/**
+ * Remove command — remove skills, MCPs, or hooks from mycelium config.
+ *
+ * mycelium remove skill <name>       — Remove a skill symlink + manifest entry
+ * mycelium remove mcp <name>         — Remove an MCP from mcps.yaml + manifest
+ * mycelium remove hook <name>        — Remove a hook from hooks.yaml + manifest
+ * mycelium remove plugin <name>      — Remove all skills from a plugin at once
+ *
+ * After removing, run `mycelium sync` to propagate to tool configs.
+ */
+import { Command } from "commander";
+export declare function removeSkill(name: string): Promise<{
+    removed: boolean;
+    error?: string;
+}>;
+export declare function removeComponent(type: string, name: string): Promise<{
+    removed: boolean;
+    error?: string;
+}>;
+export declare function removeMcp(name: string): Promise<{
+    removed: boolean;
+    error?: string;
+}>;
+export declare function removeHook(name: string): Promise<{
+    removed: boolean;
+    error?: string;
+}>;
+export declare function removePlugin(pluginName: string): Promise<{
+    removed: string[];
+    errors: string[];
+}>;
+export declare function listRemovable(): Promise<void>;
+export declare const removeCommand: Command;
+//# sourceMappingURL=remove.d.ts.map

package/dist/commands/remove.d.ts.map

@@ -0,0 +1 @@
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