@mutagent/helix 0.1.0-alpha.14

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (357) hide show
  1. package/.claude/skills/mutagent-helix/SKILL.md +113 -0
  2. package/.claude/skills/mutagent-helix/scripts/cli/codex-transcode.ts +143 -0
  3. package/.claude/skills/mutagent-helix/scripts/cli/doctor.ts +111 -0
  4. package/.claude/skills/mutagent-helix/scripts/cli/init.ts +382 -0
  5. package/.claude/skills/mutagent-helix/scripts/cli/run.sh +61 -0
  6. package/CLAUDE.md +193 -0
  7. package/LICENSE +201 -0
  8. package/NOTICE +22 -0
  9. package/README.md +209 -0
  10. package/assets/adl-loop.svg +162 -0
  11. package/assets/system-status.svg +422 -0
  12. package/bin/mutagent-cli.mjs +9950 -0
  13. package/bin/mutagent-helix.mjs +78 -0
  14. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/CLAUDE.md +28 -0
  15. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/SKILL.md +138 -0
  16. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/assets/templates/agentspec.yaml.tpl +247 -0
  17. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/references/frameworks/doc-pins.md +53 -0
  18. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/references/principles.md +91 -0
  19. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/references/requirements.yaml +295 -0
  20. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/references/workflows/orchestrator-protocol.md +302 -0
  21. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/cli/doctor.ts +116 -0
  22. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/cli/init.ts +230 -0
  23. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/cli/run.sh +60 -0
  24. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/config/resolve-spec-dir.ts +199 -0
  25. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/contract/agentspec.schema.ts +455 -0
  26. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/setup/detect.ts +67 -0
  27. package/mutagent-agentspec/.claude/skills/mutagent-agentspec/scripts/validate/validate-spec.ts +93 -0
  28. package/mutagent-agentspec/LICENSE +201 -0
  29. package/mutagent-agentspec/NOTICE +19 -0
  30. package/mutagent-agentspec/README.md +44 -0
  31. package/mutagent-builder/.claude/skills/mutagent-builder/SKILL.md +100 -0
  32. package/mutagent-builder/.claude/skills/mutagent-builder/assets/agents/ai-architect.md +312 -0
  33. package/mutagent-builder/.claude/skills/mutagent-builder/assets/agents/ai-engineer.md +357 -0
  34. package/mutagent-builder/.claude/skills/mutagent-builder/assets/templates/build-report.md.tpl +39 -0
  35. package/mutagent-builder/.claude/skills/mutagent-builder/references/principles.md +31 -0
  36. package/mutagent-builder/.claude/skills/mutagent-builder/references/workflows/build-protocol.md +61 -0
  37. package/mutagent-builder/.claude/skills/mutagent-builder/references/workflows/improve-handoff.md +23 -0
  38. package/mutagent-builder/.claude/skills/mutagent-builder/scripts/cli/run.sh +60 -0
  39. package/mutagent-builder/.claude/skills/mutagent-builder/scripts/handoff/validate-build-input.ts +72 -0
  40. package/mutagent-builder/.claude/skills/mutagent-builder/scripts/sync-spec/check-sync-spec.ts +499 -0
  41. package/mutagent-builder/.claude/skills/mutagent-builder/scripts/verify/spec-impl-coverage.ts +182 -0
  42. package/mutagent-builder/CLAUDE.md +25 -0
  43. package/mutagent-builder/README.md +26 -0
  44. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/README.md +192 -0
  45. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/SKILL.md +352 -0
  46. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/agents/ai-architect.md +256 -0
  47. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/agents/ai-engineer.md +344 -0
  48. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/agents/diagnostics-analyzer.md +576 -0
  49. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/agents/discovery.md +425 -0
  50. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/audit.json.tpl +24 -0
  51. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/audit.md.tpl +49 -0
  52. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/config.yaml.tpl +100 -0
  53. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/pr-body.md.tpl +56 -0
  54. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/report.html.tpl +327 -0
  55. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/shared/README.md +27 -0
  56. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/shared/iter-N-handover.md.tpl +125 -0
  57. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/shared/self-diagnosis-contract.v0.1.0.yaml.tpl +234 -0
  58. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/shared/spec.yaml.tpl +152 -0
  59. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/shared/team.yaml.tpl +127 -0
  60. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/templates/shared/wave-N-dashboard.html.tpl +1712 -0
  61. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/diagnostics/WF-2.1-nl-query.md +59 -0
  62. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/diagnostics/WF-2.2-tier0-progress.md +58 -0
  63. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/diagnostics/WF-2.3-analysis-progress.md +44 -0
  64. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/diagnostics/WF-2.4-html-report.md +61 -0
  65. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/diagnostics/WF-2.5-rca-detail.md +69 -0
  66. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/diagnostics/WF-2.6-stale-warning.md +53 -0
  67. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.1-welcome.md +60 -0
  68. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.2-source-platform-picker.md +41 -0
  69. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.3-source-auth.md +75 -0
  70. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.4-target-picker.md +48 -0
  71. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.5-ask-tool.md +43 -0
  72. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.6-config-review.md +57 -0
  73. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.7-filter-defaults.md +52 -0
  74. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/assets/wireframes/onboarding/WF-1.8-first-run.md +59 -0
  75. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/examples/sample-findings.json +92 -0
  76. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/examples/sample-meta.json +47 -0
  77. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/adapter-strategy.md +75 -0
  78. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/config-migration.md +84 -0
  79. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/config.md +159 -0
  80. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/filter-search-matrix.md +66 -0
  81. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/harness-knowledge.md +22 -0
  82. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/memory-format.md +78 -0
  83. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/onboarding-decisions.yaml +187 -0
  84. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/operation-inventory.md +59 -0
  85. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/overview.md +167 -0
  86. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/reference.md +119 -0
  87. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/script-index.md +101 -0
  88. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-adapter-contract.md +93 -0
  89. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/claude-code-transcripts.md +66 -0
  90. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/codex-transcripts.md +78 -0
  91. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/codex.md +145 -0
  92. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/install-paths.md +57 -0
  93. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/langfuse.md +178 -0
  94. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/local-jsonl.md +55 -0
  95. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/openobserve.md +102 -0
  96. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/source-platforms/otel.md +63 -0
  97. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/cloud-rest.md +84 -0
  98. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/local-claude.md +65 -0
  99. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/local-cloud-agent-sdk.md +92 -0
  100. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/local-codex.md +72 -0
  101. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/local-cursor.md +108 -0
  102. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/local-mastra.md +77 -0
  103. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/target-platforms/local-opencode.md +70 -0
  104. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/apply-pr-comment-format.md +82 -0
  105. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/diagnostics.md +35 -0
  106. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/handover-contract.md +247 -0
  107. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/onboarding.md +300 -0
  108. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/orchestrator-protocol.md +1861 -0
  109. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/rca.md +331 -0
  110. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/rendering-anatomy.md +314 -0
  111. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/schedule-prep.md +100 -0
  112. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/scope-model.md +128 -0
  113. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/references/workflows/verification-methodology.md +174 -0
  114. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/aggregate/sort-findings.ts +0 -0
  115. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/awareness/blind-spots.ts +167 -0
  116. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/awareness/llm-sample.ts +681 -0
  117. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/cli/doctor.ts +215 -0
  118. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/cli/init.ts +1013 -0
  119. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/cli/install-agents.ts +350 -0
  120. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/cli/run.sh +61 -0
  121. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/cli/shared-templates.ts +79 -0
  122. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/config/load.ts +392 -0
  123. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/config/resolve-credential.ts +120 -0
  124. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/config/schema.ts +641 -0
  125. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/config/validate.ts +134 -0
  126. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/context/build-diagnosis-context.ts +417 -0
  127. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/context/load-context.ts +105 -0
  128. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/contract/types.ts +166 -0
  129. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/enrich/build-render-input.ts +1964 -0
  130. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/enrich/corpus-severity.ts +172 -0
  131. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/enrich/dismissal-match.ts +270 -0
  132. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/enrich/rank-remedies.ts +75 -0
  133. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/hooks/install-hooks.sh +46 -0
  134. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/hooks/pre-push.sh +78 -0
  135. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/invocation/parse-brief.ts +188 -0
  136. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/library/match.ts +114 -0
  137. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/library/paths.ts +95 -0
  138. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/library/store.ts +535 -0
  139. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/library/types.ts +181 -0
  140. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/lint/template-inline-js.ts +267 -0
  141. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/memory/append.ts +188 -0
  142. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/memory/read.ts +218 -0
  143. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/normalize/platforms/entity-context.ts +686 -0
  144. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/normalize/read-unitf.ts +267 -0
  145. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/normalize/trace.ts +1078 -0
  146. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/normalize/unitf-adapter.ts +0 -0
  147. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/normalize/unitf-types.ts +213 -0
  148. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/report/persist-selections.ts +174 -0
  149. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/report/render.ts +3254 -0
  150. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/run/diagnose.ts +64 -0
  151. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/run/session.ts +167 -0
  152. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/sample/caps.ts +345 -0
  153. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/sample/deep-read-gate.ts +424 -0
  154. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/sample/representative.ts +584 -0
  155. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/scan/objection.ts +224 -0
  156. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/scan/trajectory.ts +489 -0
  157. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/self-diagnostics/dispatch.ts +135 -0
  158. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/self-diagnostics/probe.ts +170 -0
  159. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/setup/detect.ts +307 -0
  160. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/setup/ensure-cli.ts +315 -0
  161. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/setup/reconfigure.ts +77 -0
  162. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/setup/verify-agents.ts +207 -0
  163. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/slicer.ts +166 -0
  164. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/adapters/claude-code.ts +17 -0
  165. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/adapters/codex.ts +11 -0
  166. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/adapters/langfuse.ts +17 -0
  167. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/adapters/local-jsonl.ts +12 -0
  168. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/adapters/otel.ts +12 -0
  169. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/index.ts +54 -0
  170. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/registry.ts +45 -0
  171. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/source/types.ts +86 -0
  172. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/stale-detector.ts +74 -0
  173. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/test/render-playwright.cli.ts +477 -0
  174. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/tier0/claude-code.ts +133 -0
  175. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/tier0/langfuse.ts +143 -0
  176. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/tier0-scan.ts +423 -0
  177. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/completeness-check.ts +436 -0
  178. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/doc-refs.ts +190 -0
  179. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/finalize-gate.ts +417 -0
  180. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/findings-contract.ts +628 -0
  181. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/render-js-syntax.ts +188 -0
  182. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/report-checklist.yaml +217 -0
  183. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/trace-shape.ts +262 -0
  184. package/mutagent-diagnostics/.claude/skills/mutagent-diagnostics/scripts/validate/wave6-checklist.ts +326 -0
  185. package/mutagent-diagnostics/CLAUDE.md +41 -0
  186. package/mutagent-diagnostics/LICENSE +201 -0
  187. package/mutagent-diagnostics/NOTICE +18 -0
  188. package/mutagent-diagnostics/README.md +343 -0
  189. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/SKILL.md +548 -0
  190. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/assets/agents/audit-executor.md +169 -0
  191. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/assets/agents/dataset-builder.md +160 -0
  192. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/assets/agents/discovery.md +425 -0
  193. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/assets/agents/evaluator.md +1108 -0
  194. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/assets/brand/theme.css +213 -0
  195. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/assets/brand/wordmark.html +9 -0
  196. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/lenses/context-flow-lens.md +85 -0
  197. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/lenses/data-lens.md +47 -0
  198. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/lenses/decision-lens.md +48 -0
  199. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/lenses/methodology-critic-lens.md +53 -0
  200. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/lenses/trajectory-lens.md +44 -0
  201. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/build-review-interface.md +83 -0
  202. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/edd-loop.md +134 -0
  203. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/error-analysis.md +113 -0
  204. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/eval-audit.md +154 -0
  205. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/eval-stage.md +168 -0
  206. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/generate-synthetic-data.md +81 -0
  207. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/grounded-adjudication.md +221 -0
  208. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/memory-format.md +65 -0
  209. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/methodology.md +201 -0
  210. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/operation-inventory.md +197 -0
  211. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/validate-evaluator.md +125 -0
  212. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/workflows/orchestrator-protocol.md +300 -0
  213. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/references/write-judge-prompt.md +123 -0
  214. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/behavior-tree.schema.yaml +73 -0
  215. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/dataset.schema.yaml +66 -0
  216. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/edd-change-request.schema.yaml +114 -0
  217. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/eval-matrix.schema.yaml +74 -0
  218. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/flow-graph.schema.yaml +69 -0
  219. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/flow-profile.schema.yaml +49 -0
  220. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/methodology-review.schema.yaml +40 -0
  221. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/schemas/scorecard.schema.yaml +85 -0
  222. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/agent-dispatch.ts +0 -0
  223. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/aggregate-discover.ts +543 -0
  224. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/artifact-paths.ts +115 -0
  225. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/assemble-scorecard.ts +172 -0
  226. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/build-dataset.ts +186 -0
  227. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/build-evals.ts +93 -0
  228. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/build-review-ui.ts +393 -0
  229. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/check-method-router.ts +170 -0
  230. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/aggregate.ts +112 -0
  231. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/audit-run.ts +182 -0
  232. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/doctor.ts +211 -0
  233. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/dogfood.ts +133 -0
  234. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/init.ts +601 -0
  235. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/methodology-review.ts +122 -0
  236. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/prep.ts +295 -0
  237. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/profile-subject.ts +165 -0
  238. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/run.sh +56 -0
  239. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cli/variance-check.ts +105 -0
  240. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/code-eval.ts +248 -0
  241. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/code-quality-verdict.ts +285 -0
  242. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/codegen-evals.ts +173 -0
  243. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cold-start-project.ts +151 -0
  244. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/cold-start-sampler.ts +267 -0
  245. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/config/load.ts +343 -0
  246. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/config/schema.ts +380 -0
  247. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/agentspec-evals.ts +85 -0
  248. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/dataset.ts +149 -0
  249. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/eval-engine.ts +118 -0
  250. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/eval-matrix.ts +577 -0
  251. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/eval-types.ts +1074 -0
  252. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/flow-graph.ts +194 -0
  253. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/types.ts +303 -0
  254. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/contracts/validation.ts +193 -0
  255. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/derive-dataset.ts +152 -0
  256. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/determine-outcome.ts +219 -0
  257. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/diff-discriminate.ts +160 -0
  258. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/discover-criteria.ts +348 -0
  259. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/edd/change-request.ts +232 -0
  260. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/edd/edd-types.ts +210 -0
  261. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/edd/variance-gate.ts +186 -0
  262. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/emit-completeness.ts +111 -0
  263. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/eval-engine.ts +160 -0
  264. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/evaluate.ts +333 -0
  265. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/flow-graph.ts +230 -0
  266. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/judge-prompt-template.ts +253 -0
  267. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/judge-provider.ts +135 -0
  268. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/lint-grounding.ts +229 -0
  269. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/lint-uniformity.ts +168 -0
  270. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/living-suite.ts +109 -0
  271. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/load-bundle.ts +203 -0
  272. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/load-profile-vocab.ts +64 -0
  273. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/load-profile.ts +106 -0
  274. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/mask.ts +138 -0
  275. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/materialize-dataset.ts +113 -0
  276. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/matrix-judge.ts +750 -0
  277. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/memory/append.ts +215 -0
  278. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/memory/read.ts +168 -0
  279. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/persist-eval-criteria.ts +232 -0
  280. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/prep-tasks.ts +125 -0
  281. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/profile-subject.ts +310 -0
  282. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/publish-report.ts +131 -0
  283. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/read-unitf-traces.ts +81 -0
  284. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/render-build-cards.ts +195 -0
  285. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/render-discover-report.ts +1640 -0
  286. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/render-eval-report.ts +3838 -0
  287. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/render-report.ts +212 -0
  288. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/resolve-credential.ts +110 -0
  289. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/resolve-ref.ts +98 -0
  290. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/result-verify.ts +129 -0
  291. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/route-failures.ts +330 -0
  292. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/run-deterministic.ts +367 -0
  293. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/run-evaluate.ts +719 -0
  294. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/run-judge.ts +155 -0
  295. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/run-pipeline.ts +175 -0
  296. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/sample-traces.ts +210 -0
  297. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/self-audit.ts +387 -0
  298. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/source-map.ts +106 -0
  299. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/subject-profile.ts +134 -0
  300. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/substrate.ts +162 -0
  301. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/sync-eval-criteria.ts +244 -0
  302. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/ui-slots.ts +119 -0
  303. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/unitf-to-evaltrace.ts +284 -0
  304. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/validate-judge.ts +358 -0
  305. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/scripts/variance-compare.ts +177 -0
  306. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/subjects/mutagent-diagnostics/behavior-tree.yaml +140 -0
  307. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/subjects/mutagent-diagnostics/eval-matrix.yaml +1270 -0
  308. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/subjects/mutagent-diagnostics/methodology-review.yaml +105 -0
  309. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/workflows/audit.workflow.js +82 -0
  310. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/workflows/data-leak.workflow.js +236 -0
  311. package/mutagent-evaluator/.claude/skills/mutagent-evaluator/workflows/variance.workflow.js +163 -0
  312. package/mutagent-evaluator/CLAUDE.md +45 -0
  313. package/mutagent-evaluator/LICENSE +201 -0
  314. package/mutagent-evaluator/NOTICE +23 -0
  315. package/mutagent-evaluator/README.md +88 -0
  316. package/mutagent-optimize/.claude/skills/mutagent-optimize/SKILL.md +287 -0
  317. package/mutagent-optimize/.claude/skills/mutagent-optimize/scripts/contracts/amend-request.ts +503 -0
  318. package/mutagent-optimize/.claude/skills/mutagent-optimize/scripts/improve-loop-run.ts +304 -0
  319. package/mutagent-optimize/.claude/skills/mutagent-optimize/scripts/loop-state-cli.ts +300 -0
  320. package/mutagent-optimize/.claude/skills/mutagent-optimize/scripts/loop-state.ts +440 -0
  321. package/mutagent-optimize/CLAUDE.md +49 -0
  322. package/mutagent-optimize/README.md +26 -0
  323. package/mutagent-orchestrator/CLAUDE.md +102 -0
  324. package/mutagent-orchestrator/README.md +20 -0
  325. package/mutagent-orchestrator/assets/agents/discovery.md +425 -0
  326. package/mutagent-orchestrator/assets/agents/dogfood-monitor.md +266 -0
  327. package/mutagent-orchestrator/assets/agents/monitor.md +258 -0
  328. package/mutagent-orchestrator/orchestrator.md +782 -0
  329. package/mutagent-orchestrator/references/MONITORING.md +209 -0
  330. package/mutagent-orchestrator/references/config-fields.md +132 -0
  331. package/mutagent-orchestrator/references/config-migration.md +132 -0
  332. package/mutagent-orchestrator/references/index-registry.md +92 -0
  333. package/mutagent-orchestrator/routing.yaml +391 -0
  334. package/mutagent-orchestrator/scripts/config-schema.ts +1010 -0
  335. package/mutagent-orchestrator/scripts/dispatch.ts +439 -0
  336. package/mutagent-orchestrator/scripts/dogfood/extract-feedback.ts +203 -0
  337. package/mutagent-orchestrator/scripts/dogfood/reconstruct-trajectory.ts +327 -0
  338. package/mutagent-orchestrator/scripts/dogfood/render-dogfood-report.ts +347 -0
  339. package/mutagent-orchestrator/scripts/dogfood/resolve-subagents.ts +160 -0
  340. package/mutagent-orchestrator/scripts/dogfood/run-report.ts +264 -0
  341. package/mutagent-orchestrator/scripts/dogfood/slack-thread.ts +106 -0
  342. package/mutagent-orchestrator/scripts/dogfood/types.ts +257 -0
  343. package/mutagent-orchestrator/scripts/eval-routing.ts +753 -0
  344. package/mutagent-orchestrator/scripts/gate.ts +219 -0
  345. package/mutagent-orchestrator/scripts/handover-contract.ts +362 -0
  346. package/mutagent-orchestrator/scripts/index/build-index.ts +351 -0
  347. package/mutagent-orchestrator/scripts/index/render-index.ts +110 -0
  348. package/mutagent-orchestrator/scripts/monitor/slack-notify.ts +111 -0
  349. package/mutagent-orchestrator/scripts/monitor/triggers.ts +162 -0
  350. package/mutagent-orchestrator/scripts/onboarding-check.ts +369 -0
  351. package/mutagent-orchestrator/scripts/render-roster.ts +308 -0
  352. package/mutagent-orchestrator/scripts/resolve-credential.ts +185 -0
  353. package/mutagent-orchestrator/scripts/resolve-paths.ts +114 -0
  354. package/mutagent-orchestrator/scripts/slack/format.ts +63 -0
  355. package/mutagent-orchestrator/scripts/slack/post.ts +115 -0
  356. package/mutagent-orchestrator/scripts/sync-index.ts +311 -0
  357. package/package.json +64 -0
@@ -0,0 +1,218 @@
1
+ /**
2
+ * scripts/memory/read.ts
3
+ * PHASE 3 (PR-D) — project-level AutoMemory READER.
4
+ *
5
+ * The AutoMemory store (`.mutagent/memory/`) is COMMITTED, project-level, and shared
6
+ * across the whole ADL lifecycle. Its SUBJECT is the TOOL + operator preferences —
7
+ * NOT the diagnosed agent (that is the gitignored class-memory library). Format is
8
+ * the Claude-Code AutoMemory shape (see references/memory-format.md):
9
+ *
10
+ * .mutagent/memory/
11
+ * MEMORY.md ← index: `- [Title](<slug>.md) — <hook>` one line/entry
12
+ * <slug>.md ← one FACT per file (frontmatter name/description/metadata)
13
+ *
14
+ * This reader is consumed at run START (parse-brief / Step 3a): load the store,
15
+ * FILTER by `metadata.lifecycle ∈ { diagnose, general }` (the diagnostics stage +
16
+ * the always-relevant general facts), and hand the surviving entries to the
17
+ * orchestrator so operator feedback + tool-lessons steer the run.
18
+ *
19
+ * Type A — Pure Script (file reads; the base dir is INJECTABLE for tests; no clock).
20
+ */
21
+
22
+ import { existsSync, readFileSync, readdirSync } from "fs";
23
+ import { join } from "path";
24
+
25
+ /** The four Claude-Code memory types. */
26
+ export type MemoryType = "reference" | "user" | "feedback" | "project";
27
+
28
+ /** ADL lifecycle tag — which stage(s) an entry is relevant to. */
29
+ export type MemoryLifecycle =
30
+ | "spec"
31
+ | "build"
32
+ | "evaluate"
33
+ | "diagnose"
34
+ | "improve"
35
+ | "general";
36
+
37
+ export interface MemoryEntry {
38
+ /** Slug = the entry filename without `.md` (kebab-case). */
39
+ slug: string;
40
+ /** Frontmatter `name`. */
41
+ name: string;
42
+ /** Frontmatter `description` (used to decide relevance during recall). */
43
+ description: string;
44
+ type: MemoryType;
45
+ lifecycle: MemoryLifecycle;
46
+ /** Frontmatter `metadata.created` — the absolute date (YYYY-MM-DD). */
47
+ created: string;
48
+ /** The fact body (everything after the closing frontmatter fence). */
49
+ body: string;
50
+ }
51
+
52
+ /** Root of the project-level AutoMemory store. Injectable base for tests. */
53
+ export function memoryRoot(base: string = process.cwd()): string {
54
+ return join(base, ".mutagent", "memory");
55
+ }
56
+
57
+ export function memoryIndexPath(base?: string): string {
58
+ return join(memoryRoot(base), "MEMORY.md");
59
+ }
60
+
61
+ export function memoryEntryPath(slug: string, base?: string): string {
62
+ return join(memoryRoot(base), `${slug}.md`);
63
+ }
64
+
65
+ const VALID_TYPES: ReadonlySet<string> = new Set([
66
+ "reference",
67
+ "user",
68
+ "feedback",
69
+ "project",
70
+ ]);
71
+ const VALID_LIFECYCLES: ReadonlySet<string> = new Set([
72
+ "spec",
73
+ "build",
74
+ "evaluate",
75
+ "diagnose",
76
+ "improve",
77
+ "general",
78
+ ]);
79
+
80
+ /**
81
+ * Parse a single memory entry file (frontmatter + body). Returns null when the
82
+ * file is malformed (no frontmatter fence, missing required fields, or an invalid
83
+ * type/lifecycle) — a corrupt entry is SKIPPED, never throws (defensive read).
84
+ */
85
+ export function parseMemoryEntry(slug: string, raw: string): MemoryEntry | null {
86
+ // Frontmatter is delimited by the FIRST two `---` fences.
87
+ const match = /^---\r?\n([\s\S]*?)\r?\n---\r?\n?([\s\S]*)$/.exec(raw);
88
+ if (!match) return null;
89
+
90
+ const [, frontmatter, body] = match;
91
+ const fields: Record<string, string> = {};
92
+
93
+ // Flat key: value parse (frontmatter is intentionally shallow; `metadata.*`
94
+ // keys are indented and read with a trimmed-key heuristic).
95
+ for (const line of frontmatter.split(/\r?\n/)) {
96
+ const kv = /^\s*([A-Za-z_][A-Za-z0-9_]*)\s*:\s*(.*)\s*$/.exec(line);
97
+ if (!kv) continue;
98
+ const key = kv[1];
99
+ let val = kv[2].trim();
100
+ // Strip surrounding quotes if present.
101
+ if (
102
+ (val.startsWith('"') && val.endsWith('"') && val.length >= 2) ||
103
+ (val.startsWith("'") && val.endsWith("'") && val.length >= 2)
104
+ ) {
105
+ val = val.slice(1, -1);
106
+ }
107
+ // Last-wins is fine — the shape has no key collisions across name/description
108
+ // and the metadata.* leaf keys (type/lifecycle/created) are unique names.
109
+ if (val !== "") fields[key] = val;
110
+ }
111
+
112
+ const name = fields.name;
113
+ const description = fields.description;
114
+ const type = fields.type;
115
+ const lifecycle = fields.lifecycle;
116
+ const created = fields.created;
117
+
118
+ if (!name || !description || !type || !lifecycle || !created) return null;
119
+ if (!VALID_TYPES.has(type)) return null;
120
+ if (!VALID_LIFECYCLES.has(lifecycle)) return null;
121
+
122
+ return {
123
+ slug,
124
+ name,
125
+ description,
126
+ type: type as MemoryType,
127
+ lifecycle: lifecycle as MemoryLifecycle,
128
+ created,
129
+ body: body.trim(),
130
+ };
131
+ }
132
+
133
+ /**
134
+ * Read ALL entries from the AutoMemory store. The `MEMORY.md` index drives the read
135
+ * (entries listed there, in index order); an entry file missing on disk is skipped.
136
+ * When the index is absent, falls back to a deterministic dir scan (sorted slugs) so
137
+ * a hand-authored store without an index still loads. Never throws.
138
+ */
139
+ export function readAllMemory(base?: string): MemoryEntry[] {
140
+ const root = memoryRoot(base);
141
+ if (!existsSync(root)) return [];
142
+
143
+ const slugs = orderedSlugs(base);
144
+ const entries: MemoryEntry[] = [];
145
+ for (const slug of slugs) {
146
+ const p = memoryEntryPath(slug, base);
147
+ if (!existsSync(p)) continue;
148
+ let raw: string;
149
+ try {
150
+ raw = readFileSync(p, "utf8");
151
+ } catch {
152
+ continue;
153
+ }
154
+ const parsed = parseMemoryEntry(slug, raw);
155
+ if (parsed) entries.push(parsed);
156
+ }
157
+ return entries;
158
+ }
159
+
160
+ /**
161
+ * Read the AutoMemory store FILTERED to a stage. Keeps entries whose lifecycle is
162
+ * the given stage OR `general` (always-relevant). For the diagnostics run this is
163
+ * called with `diagnose` — yielding `{ diagnose, general }` (the plan's filter).
164
+ */
165
+ export function readMemoryForStage(
166
+ stage: MemoryLifecycle,
167
+ base?: string,
168
+ ): MemoryEntry[] {
169
+ return readAllMemory(base).filter(
170
+ (e) => e.lifecycle === stage || e.lifecycle === "general",
171
+ );
172
+ }
173
+
174
+ /** Convenience: the diagnostics-stage filter — `lifecycle ∈ { diagnose, general }`. */
175
+ export function readDiagnoseMemory(base?: string): MemoryEntry[] {
176
+ return readMemoryForStage("diagnose", base);
177
+ }
178
+
179
+ /**
180
+ * The slugs to read, in order: parse `MEMORY.md` index links when present, else a
181
+ * deterministic sorted dir scan of `*.md` (excluding the index itself).
182
+ */
183
+ function orderedSlugs(base?: string): string[] {
184
+ const indexPath = memoryIndexPath(base);
185
+ if (existsSync(indexPath)) {
186
+ try {
187
+ const idx = readFileSync(indexPath, "utf8");
188
+ const slugs: string[] = [];
189
+ const linkRe = /^-\s+\[[^\]]*\]\(([^)]+?)\.md\)/gm;
190
+ let m: RegExpExecArray | null;
191
+ while ((m = linkRe.exec(idx)) !== null) {
192
+ const slug = m[1].replace(/^\.\//, "");
193
+ if (slug && slug !== "MEMORY") slugs.push(slug);
194
+ }
195
+ if (slugs.length > 0) return slugs;
196
+ } catch {
197
+ // fall through to dir scan
198
+ }
199
+ }
200
+ const root = memoryRoot(base);
201
+ try {
202
+ return readdirSync(root)
203
+ .filter((f) => f.endsWith(".md") && f !== "MEMORY.md")
204
+ .map((f) => f.slice(0, -3))
205
+ .sort();
206
+ } catch {
207
+ return [];
208
+ }
209
+ }
210
+
211
+ // CLI usage: bun scripts/memory/read.ts [project-root] [stage]
212
+ if (import.meta.main) {
213
+ const projectRoot = process.argv[2] ?? process.cwd();
214
+ const stage = (process.argv[3] as MemoryLifecycle) ?? "diagnose";
215
+ const entries = readMemoryForStage(stage, projectRoot);
216
+ process.stdout.write(JSON.stringify(entries, null, 2) + "\n");
217
+ process.exit(0);
218
+ }