@murphai/hosted-execution 0.1.15 → 0.1.18

package/node_modules/@murphai/core/dist/bank/allergies.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"allergies.js","sourceRoot":"","sources":["../../src/bank/allergies.ts"],"names":[],"mappings":"AAAA,OAAO,EACL,+BAA+B,EAC/B,gCAAgC,GAEjC,MAAM,oBAAoB,CAAC;AAE5B,OAAO,EAAE,UAAU,EAAE,MAAM,cAAc,CAAC;AAC1C,OAAO,EAAE,gBAAgB,EAAE,MAAM,WAAW,CAAC;AAC7C,OAAO,EAAE,yBAAyB,EAAE,MAAM,oBAAoB,CAAC;AAE/D,OAAO,EACL,mBAAmB,EACnB,qBAAqB,EACrB,gBAAgB,EAChB,sBAAsB,EACtB,gBAAgB,GACjB,MAAM,YAAY,CAAC;AACpB,OAAO,EACL,iBAAiB,EACjB,UAAU,EACV,WAAW,EACX,qBAAqB,EACrB,qBAAqB,EACrB,2BAA2B,EAC3B,gBAAgB,EAChB,YAAY,EACZ,cAAc,EACd,sBAAsB,EACtB,0BAA0B,EAC1B,0BAA0B,EAC1B,sBAAsB,EACtB,aAAa,EACb,OAAO,EACP,cAAc,EACd,WAAW,GACZ,MAAM,aAAa,CAAC;AAarB,SAAS,SAAS,CAAC,MAAqB;IACtC,MAAM,SAAS,GAAG,4BAA4B,CAAC,MAAM,CAAC,CAAC;IAEvD,OAAO,iBAAiB,CACtB,MAAM,CAAC,KAAK,EACZ,UAAU,CAAC;QACT,CAAC,WAAW,EAAE,MAAM,CAAC,SAAS,CAAC;QAC/B,CAAC,QAAQ,EAAE,MAAM,CAAC,MAAM,CAAC;QACzB,CAAC,aAAa,EAAE,MAAM,CAAC,WAAW,CAAC;QACnC,CAAC,UAAU,EAAE,MAAM,CAAC,QAAQ,CAAC;QAC7B,CAAC,aAAa,EAAE,MAAM,CAAC,UAAU,CAAC;KACnC,CAAC,EACF;QACE,WAAW,CAAC,oBAAoB,EAAE,SAAS,CAAC,mBAAmB,CAAC;QAChE,OAAO,CAAC,MAAM,EAAE,MAAM,CAAC,IAAI,IAAI,QAAQ,CAAC;KACzC,CACF,CAAC;AACJ,CAAC;AAED,SAAS,uBAAuB,CAC9B,UAA6B;IAE7B,MAAM,MAAM,GAAG,+BAA+B,CAAC,QAAQ,CAAC,iBAAiB,CAAC;IAE1E,IAAI,CAAC,MAAM,EAAE,CAAC;QACZ,MAAM,IAAI,KAAK,CAAC,8DAA8D,CAAC,CAAC;IAClF,CAAC;IAED,MAAM,MAAM,GAAG,MAAM,CAAC,SAAS,CAAC,UAAU,CAAC,CAAC;IAE5C,IAAI,CAAC,MAAM,CAAC,OAAO,EAAE,CAAC;QACpB,MAAM,IAAI,UAAU,CAAC,uBAAuB,EAAE,oDAAoD,CAAC,CAAC;IACtG,CAAC;IAED,OAAO,MAAM,CAAC,IAA0B,CAAC;AAC3C,CAAC;AAED,SAAS,wBAAwB,CAAC,KAAa;IAC7C,OAAO,KAAK,KAAK,mBAAmB,CAAC,CAAC,CAAC,KAAK,CAAC,CAAC,CAAC,IAAI,CAAC;AACtD,CAAC;AAED,SAAS,mBAAmB,CAAC,IAAiB,EAAE,KAAkB;IAChE,OAAO,IAAI,CAAC,QAAQ,CAAC,aAAa,CAAC,KAAK,CAAC,QAAQ,CAAC,CAAC;AACrD,CAAC;AAED,SAAS,2BAA2B,CAAC,KAEpC;IACC,OAAO,CAAC,KAAK,CAAC,mBAAmB,IAAI,EAAE,CAAC,CAAC,GAAG,CAAC,CAAC,QAAQ,EAAE,EAAE,CAAC,CAAC;QAC1D,IAAI,EAAE,mBAAmB;QACzB,QAAQ;KACT,CAAuB,CAAC,CAAC;AAC5B,CAAC;AAED,SAAS,qBAAqB,CAAC,QAAgC;IAC7D,MAAM,WAAW,GAAG,CAAC,GAAG,QAAQ,CAAC,CAAC,IAAI,CAAC,mBAAmB,CAAC,CAAC;IAC5D,MAAM,KAAK,GAAkB,EAAE,CAAC;IAChC,MAAM,IAAI,GAAG,IAAI,GAAG,EAAU,CAAC;IAE/B,KAAK,MAAM,IAAI,IAAI,WAAW,EAAE,CAAC;QAC/B,MAAM,SAAS,GAAG,GAAG,IAAI,CAAC,IAAI,IAAI,IAAI,CAAC,QAAQ,EAAE,CAAC;QAClD,IAAI,IAAI,CAAC,GAAG,CAAC,SAAS,CAAC,EAAE,CAAC;YACxB,SAAS;QACX,CAAC;QAED,IAAI,CAAC,GAAG,CAAC,SAAS,CAAC,CAAC;QACpB,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IACnB,CAAC;IAED,OAAO,KAAK,CAAC;AACf,CAAC;AAED,SAAS,iBAAiB,CAAC,UAA6B;IACtD,OAAO,qBAAqB,CAC1B,gCAAgC,CAAC,SAAS,EAAE,UAAU,CAAC,CAAC,OAAO,CAAC,CAAC,IAAI,EAAE,EAAE;QACvE,MAAM,IAAI,GAAG,wBAAwB,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;QACjD,OAAO,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,IAAI,EAAE,QAAQ,EAAE,IAAI,CAAC,QAAQ,EAAwB,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC;IAC/E,CAAC,CAAC,CACH,CAAC;AACJ,CAAC;AAED,SAAS,yBAAyB,CAChC,KAA6B;IAE7B,MAAM,mBAAmB,GAAG,KAAK,CAAC,GAAG,CAAC,CAAC,IAAI,EAAE,EAAE,CAAC,IAAI,CAAC,QAAQ,CAAC,CAAC;IAE/D,OAAO;QACL,mBAAmB,EAAE,mBAAmB,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,mBAAmB,CAAC,CAAC,CAAC,SAAS;QACrF,KAAK,EAAE,CAAC,GAAG,KAAK,CAAC;KAClB,CAAC;AACJ,CAAC;AAED,SAAS,4BAA4B,CAAC,KAGrC;IACC,MAAM,KAAK,GAAG,qBAAqB,CACjC,KAAK,CAAC,KAAK,KAAK,SAAS;QACvB,CAAC,CAAC,CAAC,GAAG,KAAK,CAAC,KAAK,CAAC;QAClB,CAAC,CAAC,2BAA2B,CAAC;YAC1B,mBAAmB,EAAE,KAAK,CAAC,mBAAmB;SAC/C,CAAC,CACP,CAAC;IAEF,OAAO,yBAAyB,CAAC,KAAK,CAAC,CAAC;AAC1C,CAAC;AAED,SAAS,kBAAkB,CACzB,UAA6B,EAC7B,YAAoB,EACpB,QAAgB;IAEhB,MAAM,MAAM,GAAG,uBAAuB,CAAC,UAAU,CAAC,CAAC;IACnD,sBAAsB,CACpB,MAAsC,EACtC,sBAAsB,EACtB,gBAAgB,EAChB,uBAAuB,EACvB,oDAAoD,CACrD,CAAC;IACF,MAAM,SAAS,GAAG,4BAA4B,CAAC;QAC7C,KAAK,EAAE,iBAAiB,CAAC,UAAU,CAAC;KACrC,CAAC,CAAC;IAEH,MAAM,MAAM,GAAG,cAAc,CAAC;QAC5B,aAAa,EAAE,sBAAsB;QACrC,OAAO,EAAE,gBAAgB;QACzB,SAAS,EAAE,aAAa,CAAC,MAAM,CAAC,SAAS,EAAE,WAAW,EAAE,EAAE,CAAC;QAC3D,IAAI,EAAE,aAAa,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,EAAE,GAAG,CAAC;QAC7C,KAAK,EAAE,aAAa,CAAC,MAAM,CAAC,KAAK,EAAE,OAAO,EAAE,GAAG,CAAC;QAChD,SAAS,EAAE,aAAa,CAAC,MAAM,CAAC,SAAS,EAAE,WAAW,EAAE,GAAG,CAAC;QAC5D,MAAM,EAAE,YAAY,CAAC,MAAM,CAAC,MAAM,EAAE,gBAAgB,EAAE,QAAQ,CAAC,IAAI,QAAQ;QAC3E,WAAW,EAAE,YAAY,CAAC,MAAM,CAAC,WAAW,EAAE,qBAAqB,EAAE,aAAa,CAAC;QACnF,QAAQ,EAAE,cAAc,CAAC,MAAM,CAAC,QAAQ,EAAE,UAAU,EAAE,GAAG,CAAC;QAC1D,UAAU,EAAE,gBAAgB,CAAC,MAAM,CAAC,UAAU,EAAE,YAAY,CAAC;QAC7D,mBAAmB,EAAE,SAAS,CAAC,mBAAmB;QAClD,IAAI,EAAE,cAAc,CAAC,MAAM,CAAC,IAAI,EAAE,MAAM,EAAE,IAAI,CAAC;QAC/C,KAAK,EAAE,SAAS,CAAC,KAAK;KACvB,CAAkB,CAAC;IAEpB,OAAO;QACL,MAAM;QACN,QAAQ,EAAE;YACR,YAAY;YACZ,QAAQ;SACT;KACF,CAAC;AACJ,CAAC;AAED,SAAS,eAAe,CAAC,MAAqB;IAC5C,MAAM,SAAS,GAAG,4BAA4B,CAAC,MAAM,CAAC,CAAC;IAEvD,OAAO,cAAc,CAAC;QACpB,aAAa,EAAE,sBAAsB;QACrC,OAAO,EAAE,gBAAgB;QACzB,SAAS,EAAE,MAAM,CAAC,SAAS;QAC3B,IAAI,EAAE,MAAM,CAAC,IAAI;QACjB,KAAK,EAAE,MAAM,CAAC,KAAK;QACnB,SAAS,EAAE,MAAM,CAAC,SAAS;QAC3B,MAAM,EAAE,MAAM,CAAC,MAAM;QACrB,WAAW,EAAE,MAAM,CAAC,WAAW;QAC/B,QAAQ,EAAE,MAAM,CAAC,QAAQ;QACzB,UAAU,EAAE,MAAM,CAAC,UAAU;QAC7B,mBAAmB,EAAE,SAAS,CAAC,mBAAmB;QAClD,KAAK,EAAE,sBAAsB,CAAC,SAAS,CAAC,KAAK,CAAC;QAC9C,IAAI,EAAE,MAAM,CAAC,IAAI;KAClB,CAAsB,CAAC;AAC1B,CAAC;AAED,MAAM,kBAAkB,GAAG,yBAAyB,CAAwB;IAC1E,SAAS,EAAE,mBAAmB;IAC9B,eAAe,EAAE,kBAAkB;IACnC,gBAAgB,EAAE,CAAC,MAAM,EAAE,EA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package/node_modules/@murphai/core/dist/bank/conditions.d.ts

@@ -0,0 +1,5 @@
+import type { ConditionStoredDocument, ReadConditionInput, UpsertConditionInput, UpsertConditionResult } from "./types.ts";
+export declare function upsertCondition(input: UpsertConditionInput): Promise<UpsertConditionResult>;
+export declare function listConditions(vaultRoot: string): Promise<ConditionStoredDocument[]>;
+export declare function readCondition({ vaultRoot, conditionId, slug, }: ReadConditionInput): Promise<ConditionStoredDocument>;
+//# sourceMappingURL=conditions.d.ts.map

package/node_modules/@murphai/core/dist/bank/conditions.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"conditions.d.ts","sourceRoot":"","sources":["../../src/bank/conditions.ts"],"names":[],"mappings":"AAwCA,OAAO,KAAK,EAIV,uBAAuB,EACvB,kBAAkB,EAClB,oBAAoB,EACpB,qBAAqB,EACtB,MAAM,YAAY,CAAC;AAoPpB,wBAAsB,eAAe,CACnC,KAAK,EAAE,oBAAoB,GAC1B,OAAO,CAAC,qBAAqB,CAAC,CAkFhC;AAED,wBAAsB,cAAc,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,uBAAuB,EAAE,CAAC,CAE1F;AAED,wBAAsB,aAAa,CAAC,EAClC,SAAS,EACT,WAAW,EACX,IAAI,GACL,EAAE,kBAAkB,GAAG,OAAO,CAAC,uBAAuB,CAAC,CAQvD"}

package/node_modules/@murphai/core/dist/bank/conditions.js

@@ -0,0 +1,249 @@
+import { conditionRegistryEntityDefinition, extractHealthEntityRegistryLinks, } from "@murphai/contracts";
+import { VaultError } from "../errors.js";
+import { generateRecordId } from "../ids.js";
+import { createMarkdownRegistryApi } from "../registry/api.js";
+import { CONDITIONS_DIRECTORY, CONDITION_CLINICAL_STATUSES, CONDITION_DOC_TYPE, CONDITION_SCHEMA_VERSION, CONDITION_SEVERITIES, CONDITION_VERIFICATION_STATUSES, } from "./types.js";
+import { buildMarkdownBody, detailList, listSection, normalizeRecordIdList, normalizeSelectorSlug, normalizeUpsertSelectorSlug, frontmatterLinkObjects, optionalDateOnly, optionalEnum, optionalString, resolveOptionalUpsertValue, resolveRequiredUpsertValue, requireMatchingDocType, requireString, section, stripUndefined, normalizeId, validateSortedStringList, } from "./shared.js";
+function buildBody(record) {
+    const relations = canonicalizeConditionRelations(record);
+    return buildMarkdownBody(record.title, detailList([
+        ["Clinical status", record.clinicalStatus],
+        ["Verification status", record.verificationStatus],
+        ["Severity", record.severity],
+        ["Asserted on", record.assertedOn],
+        ["Resolved on", record.resolvedOn],
+    ]), [
+        listSection("Body Sites", record.bodySites),
+        listSection("Related Goals", relations.relatedGoalIds),
+        listSection("Related Protocols", relations.relatedProtocolIds),
+        section("Note", record.note ?? "- none"),
+    ]);
+}
+function parseConditionFrontmatter(attributes) {
+    const schema = conditionRegistryEntityDefinition.registry.frontmatterSchema;
+    if (!schema) {
+        throw new Error("Condition registry definition is missing a frontmatter schema.");
+    }
+    const result = schema.safeParse(attributes);
+    if (!result.success) {
+        throw new VaultError("VAULT_INVALID_CONDITION", "Condition registry document has an unexpected shape.");
+    }
+    return result.data;
+}
+function normalizeConditionLinkType(value) {
+    switch (value) {
+        case "related_goal":
+        case "related_protocol":
+            return value;
+        default:
+            return null;
+    }
+}
+function compareConditionLinks(left, right) {
+    const order = {
+        related_goal: 0,
+        related_protocol: 1,
+    };
+    return order[left.type] - order[right.type] || left.targetId.localeCompare(right.targetId);
+}
+function buildConditionLinksFromFields(input) {
+    return [
+        ...(input.relatedGoalIds ?? []).map((targetId) => ({ type: "related_goal", targetId })),
+        ...(input.relatedProtocolIds ?? []).map((targetId) => ({
+            type: "related_protocol",
+            targetId,
+        })),
+    ];
+}
+function normalizeConditionLinks(rawLinks) {
+    const sortedLinks = [...rawLinks].sort(compareConditionLinks);
+    const links = [];
+    const seen = new Set();
+    for (const link of sortedLinks) {
+        const dedupeKey = `${link.type}:${link.targetId}`;
+        if (seen.has(dedupeKey)) {
+            continue;
+        }
+        seen.add(dedupeKey);
+        links.push(link);
+    }
+    return links;
+}
+function parseConditionLinks(attributes) {
+    return normalizeConditionLinks(extractHealthEntityRegistryLinks("condition", attributes).flatMap((link) => {
+        const type = normalizeConditionLinkType(link.type);
+        return type ? [{ type, targetId: link.targetId }] : [];
+    }));
+}
+function conditionRelationsFromLinks(links) {
+    const relatedGoalIds = links
+        .filter((link) => link.type === "related_goal")
+        .map((link) => link.targetId);
+    const relatedProtocolIds = links
+        .filter((link) => link.type === "related_protocol")
+        .map((link) => link.targetId);
+    return {
+        relatedGoalIds: relatedGoalIds.length > 0 ? relatedGoalIds : undefined,
+        relatedProtocolIds: relatedProtocolIds.length > 0 ? relatedProtocolIds : undefined,
+        links: [...links],
+    };
+}
+function canonicalizeConditionRelations(input) {
+    const links = normalizeConditionLinks(input.links !== undefined
+        ? [...input.links]
+        : buildConditionLinksFromFields({
+            relatedGoalIds: input.relatedGoalIds,
+            relatedProtocolIds: input.relatedProtocolIds,
+        }));
+    return conditionRelationsFromLinks(links);
+}
+function parseConditionRecord(attributes, relativePath, markdown) {
+    const parsed = parseConditionFrontmatter(attributes);
+    requireMatchingDocType(parsed, CONDITION_SCHEMA_VERSION, CONDITION_DOC_TYPE, "VAULT_INVALID_CONDITION", "Condition registry document has an unexpected shape.");
+    const relations = canonicalizeConditionRelations({
+        links: parseConditionLinks(attributes),
+    });
+    const entity = stripUndefined({
+        schemaVersion: CONDITION_SCHEMA_VERSION,
+        docType: CONDITION_DOC_TYPE,
+        conditionId: requireString(parsed.conditionId, "conditionId", 64),
+        slug: requireString(parsed.slug, "slug", 160),
+        title: requireString(parsed.title, "title", 160),
+        clinicalStatus: optionalEnum(parsed.clinicalStatus, CONDITION_CLINICAL_STATUSES, "clinicalStatus") ?? "active",
+        verificationStatus: optionalEnum(parsed.verificationStatus, CONDITION_VERIFICATION_STATUSES, "verificationStatus"),
+        assertedOn: optionalDateOnly(parsed.assertedOn, "assertedOn"),
+        resolvedOn: optionalDateOnly(parsed.resolvedOn, "resolvedOn"),
+        severity: optionalEnum(parsed.severity, CONDITION_SEVERITIES, "severity"),
+        bodySites: validateSortedStringList(parsed.bodySites, "bodySites", "bodySite", 16, 120),
+        relatedGoalIds: relations.relatedGoalIds,
+        relatedProtocolIds: relations.relatedProtocolIds,
+        note: optionalString(parsed.note, "note", 4000),
+        links: relations.links,
+    });
+    return {
+        entity,
+        document: {
+            relativePath,
+            markdown,
+        },
+    };
+}
+function buildAttributes(record) {
+    const relations = canonicalizeConditionRelations(record);
+    return stripUndefined({
+        schemaVersion: CONDITION_SCHEMA_VERSION,
+        docType: CONDITION_DOC_TYPE,
+        conditionId: record.conditionId,
+        slug: record.slug,
+        title: record.title,
+        clinicalStatus: record.clinicalStatus,
+        verificationStatus: record.verificationStatus,
+        assertedOn: record.assertedOn,
+        resolvedOn: record.resolvedOn,
+        severity: record.severity,
+        bodySites: record.bodySites,
+        relatedGoalIds: relations.relatedGoalIds,
+        relatedProtocolIds: relations.relatedProtocolIds,
+        links: frontmatterLinkObjects(relations.links),
+        note: record.note,
+    });
+}
+function validateConditionTimeline(record) {
+    if (record.resolvedOn && record.clinicalStatus !== "resolved") {
+        throw new VaultError("VAULT_INVALID_INPUT", "resolvedOn requires clinicalStatus=resolved.");
+    }
+    if (record.assertedOn && record.resolvedOn && record.resolvedOn < record.assertedOn) {
+        throw new VaultError("VAULT_INVALID_INPUT", "resolvedOn must be on or after assertedOn.");
+    }
+    return record;
+}
+const conditionRegistryApi = createMarkdownRegistryApi({
+    directory: CONDITIONS_DIRECTORY,
+    recordFromParts: parseConditionRecord,
+    isExpectedRecord: (record) => record.entity.docType === CONDITION_DOC_TYPE &&
+        record.entity.schemaVersion === CONDITION_SCHEMA_VERSION,
+    invalidCode: "VAULT_INVALID_CONDITION",
+    invalidMessage: "Condition registry document has an unexpected shape.",
+    sortRecords: (records) => records.sort((left, right) => left.entity.title.localeCompare(right.entity.title) ||
+        left.entity.conditionId.localeCompare(right.entity.conditionId)),
+    getRecordId: (record) => record.entity.conditionId,
+    getRecordSlug: (record) => record.entity.slug,
+    getRecordRelativePath: (record) => record.document.relativePath,
+    conflictCode: "VAULT_CONDITION_CONFLICT",
+    conflictMessage: "Condition id and slug resolve to different records.",
+    readMissingCode: "VAULT_CONDITION_MISSING",
+    readMissingMessage: "Condition was not found.",
+    createRecordId: () => generateRecordId("cond"),
+    operationType: "condition_upsert",
+    summary: (recordId) => `Upsert condition ${recordId}`,
+    audit: {
+        action: "condition_upsert",
+        commandName: "core.upsertCondition",
+        summary: (_created, recordId) => `Upserted condition ${recordId}.`,
+    },
+});
+export async function upsertCondition(input) {
+    const normalizedConditionId = normalizeId(input.conditionId, "conditionId", "cond");
+    const requestedSlug = normalizeUpsertSelectorSlug(input.slug, input.title);
+    const existingRecord = await conditionRegistryApi.resolveExistingRecord({
+        vaultRoot: input.vaultRoot,
+        recordId: normalizedConditionId,
+        slug: requestedSlug,
+    });
+    const existingEntity = existingRecord?.entity;
+    const title = requireString(input.title ?? existingEntity?.title, "title", 160);
+    return conditionRegistryApi.upsertRecord({
+        vaultRoot: input.vaultRoot,
+        existingRecord,
+        recordId: normalizedConditionId,
+        requestedSlug,
+        defaultSlug: normalizeUpsertSelectorSlug(undefined, title) ?? "",
+        buildDocument: (target) => {
+            const relatedGoalIds = resolveOptionalUpsertValue(input.relatedGoalIds, existingEntity?.relatedGoalIds, (value) => normalizeRecordIdList(value, "relatedGoalIds", "goal"));
+            const relatedProtocolIds = resolveOptionalUpsertValue(input.relatedProtocolIds, existingEntity?.relatedProtocolIds, (value) => normalizeRecordIdList(value, "relatedProtocolIds", "prot"));
+            const usesRelationInputs = input.links !== undefined ||
+                input.relatedGoalIds !== undefined ||
+                input.relatedProtocolIds !== undefined;
+            const relations = canonicalizeConditionRelations({
+                links: input.links !== undefined ? input.links : usesRelationInputs ? undefined : existingEntity?.links,
+                relatedGoalIds,
+                relatedProtocolIds,
+            });
+            const entity = validateConditionTimeline(stripUndefined({
+                schemaVersion: CONDITION_SCHEMA_VERSION,
+                docType: CONDITION_DOC_TYPE,
+                conditionId: target.recordId,
+                slug: target.slug,
+                title,
+                clinicalStatus: resolveRequiredUpsertValue(input.clinicalStatus, existingEntity?.clinicalStatus, "active", (value) => optionalEnum(value, CONDITION_CLINICAL_STATUSES, "clinicalStatus") ?? "active"),
+                verificationStatus: resolveOptionalUpsertValue(input.verificationStatus, existingEntity?.verificationStatus, (value) => optionalEnum(value, CONDITION_VERIFICATION_STATUSES, "verificationStatus")),
+                assertedOn: resolveOptionalUpsertValue(input.assertedOn, existingEntity?.assertedOn, (value) => optionalDateOnly(value, "assertedOn")),
+                resolvedOn: resolveOptionalUpsertValue(input.resolvedOn, existingEntity?.resolvedOn, (value) => optionalDateOnly(value, "resolvedOn")),
+                severity: resolveOptionalUpsertValue(input.severity, existingEntity?.severity, (value) => optionalEnum(value, CONDITION_SEVERITIES, "severity")),
+                bodySites: resolveOptionalUpsertValue(input.bodySites, existingEntity?.bodySites, (value) => validateSortedStringList(value, "bodySites", "bodySite", 16, 120)),
+                relatedGoalIds: relations.relatedGoalIds,
+                relatedProtocolIds: relations.relatedProtocolIds,
+                note: resolveOptionalUpsertValue(input.note, existingEntity?.note, (value) => optionalString(value, "note", 4000)),
+                links: relations.links,
+            }));
+            const attributes = buildAttributes(entity);
+            return {
+                attributes,
+                body: buildBody(entity),
+            };
+        },
+    });
+}
+export async function listConditions(vaultRoot) {
+    return conditionRegistryApi.listRecords(vaultRoot);
+}
+export async function readCondition({ vaultRoot, conditionId, slug, }) {
+    const normalizedConditionId = normalizeId(conditionId, "conditionId", "cond");
+    const normalizedSlug = normalizeSelectorSlug(slug);
+    return conditionRegistryApi.readRecord({
+        vaultRoot,
+        recordId: normalizedConditionId,
+        slug: normalizedSlug,
+    });
+}
+//# sourceMappingURL=conditions.js.map

package/node_modules/@murphai/core/dist/bank/conditions.js.map

@@ -0,0 +1 @@
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package/node_modules/@murphai/core/dist/bank/foods.d.ts

@@ -0,0 +1,8 @@
+import { type FoodUpsertPayload } from "@murphai/contracts";
+import type { DeleteFoodInput, DeleteFoodResult, FoodRecord, ReadFoodInput, UpsertFoodInput, UpsertFoodResult } from "./types.ts";
+export declare function foodRecordToBasePayload(record: FoodRecord): Omit<FoodUpsertPayload, "foodId">;
+export declare function upsertFood(input: UpsertFoodInput): Promise<UpsertFoodResult>;
+export declare function listFoods(vaultRoot: string): Promise<FoodRecord[]>;
+export declare function readFood({ vaultRoot, foodId, slug }: ReadFoodInput): Promise<FoodRecord>;
+export declare function deleteFood({ vaultRoot, foodId, slug }: DeleteFoodInput): Promise<DeleteFoodResult>;
+//# sourceMappingURL=foods.d.ts.map

package/node_modules/@murphai/core/dist/bank/foods.d.ts.map

@@ -0,0 +1 @@
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package/node_modules/@murphai/core/dist/bank/foods.js

@@ -0,0 +1,255 @@
+import { extractBankEntityRegistryLinks, } from "@murphai/contracts";
+import { VaultError } from "../errors.js";
+import { generateRecordId } from "../ids.js";
+import { createMarkdownRegistryApi } from "../registry/api.js";
+import { FOODS_DIRECTORY, FOOD_DOC_TYPE, FOOD_SCHEMA_VERSION, FOOD_STATUSES, } from "./types.js";
+import { buildDocumentFromAttributes, buildMarkdownBody, detailList, frontmatterLinkObjects, listSection, normalizeDomainList, normalizeId, normalizeRecordIdList, normalizeSelectorSlug, normalizeUniqueTextList, normalizeUpsertSelectorSlug, optionalEnum, optionalString, requireObject, requireMatchingDocType, requireString, resolveOptionalUpsertValue, resolveRequiredUpsertValue, section, stripUndefined, } from "./shared.js";
+const DAILY_TIME_PATTERN = /^(?:[01]\d|2[0-3]):[0-5]\d$/u;
+function normalizeFoodStatus(value) {
+    return optionalEnum(value, FOOD_STATUSES, "status") ?? "active";
+}
+function normalizeFoodAutoLogDailyRule(value) {
+    if (value === undefined || value === null) {
+        return undefined;
+    }
+    const object = requireObject(value, "autoLogDaily");
+    const time = requireString(object.time, "autoLogDaily.time", 5);
+    if (!DAILY_TIME_PATTERN.test(time)) {
+        throw new VaultError("VAULT_INVALID_INPUT", "autoLogDaily.time must use 24-hour HH:MM form.");
+    }
+    return { time };
+}
+function buildBody(record) {
+    const relations = canonicalizeFoodRelations(record);
+    const sections = [
+        record.summary ? section("Summary", record.summary) : null,
+        record.aliases?.length ? listSection("Aliases", record.aliases) : null,
+        record.ingredients?.length ? listSection("Ingredients", record.ingredients) : null,
+        listSection("Tags", record.tags),
+        listSection("Attached protocols", relations.attachedProtocolIds),
+        record.note ? section("Notes", record.note) : null,
+    ].filter((sectionValue) => Boolean(sectionValue));
+    return buildMarkdownBody(record.title, detailList([
+        ["Status", record.status],
+        ["Kind", record.kind],
+        ["Brand", record.brand],
+        ["Vendor", record.vendor],
+        ["Location", record.location],
+        ["Serving", record.serving],
+        ["Auto-log daily", record.autoLogDaily?.time],
+    ]), sections);
+}
+function normalizeFoodLinkType(value) {
+    return value === "related_protocol" ? value : null;
+}
+function compareFoodLinks(left, right) {
+    return left.targetId.localeCompare(right.targetId);
+}
+function buildFoodLinksFromFields(input) {
+    return (input.attachedProtocolIds ?? []).map((targetId) => ({
+        type: "related_protocol",
+        targetId,
+    }));
+}
+function normalizeFoodLinks(rawLinks) {
+    const sortedLinks = [...rawLinks].sort(compareFoodLinks);
+    const links = [];
+    const seen = new Set();
+    for (const link of sortedLinks) {
+        const dedupeKey = `${link.type}:${link.targetId}`;
+        if (seen.has(dedupeKey)) {
+            continue;
+        }
+        seen.add(dedupeKey);
+        links.push(link);
+    }
+    return links;
+}
+function parseFoodLinks(attributes) {
+    return normalizeFoodLinks(extractBankEntityRegistryLinks("food", attributes).flatMap((link) => {
+        const type = normalizeFoodLinkType(link.type);
+        return type ? [{ type, targetId: link.targetId }] : [];
+    }));
+}
+function foodRelationsFromLinks(links) {
+    const attachedProtocolIds = links.map((link) => link.targetId);
+    return {
+        attachedProtocolIds: attachedProtocolIds.length > 0 ? attachedProtocolIds : undefined,
+        links: [...links],
+    };
+}
+function canonicalizeFoodRelations(input) {
+    const links = normalizeFoodLinks(input.links !== undefined
+        ? [...input.links]
+        : buildFoodLinksFromFields({
+            attachedProtocolIds: input.attachedProtocolIds,
+        }));
+    return foodRelationsFromLinks(links);
+}
+function parseFoodRecord(attributes, relativePath, markdown) {
+    requireMatchingDocType(attributes, FOOD_SCHEMA_VERSION, FOOD_DOC_TYPE, "VAULT_INVALID_FOOD", "Food registry document has an unexpected shape.");
+    const relations = canonicalizeFoodRelations({
+        links: parseFoodLinks(attributes),
+        attachedProtocolIds: normalizeRecordIdList(attributes.attachedProtocolIds, "attachedProtocolIds", "prot"),
+    });
+    return stripUndefined({
+        schemaVersion: FOOD_SCHEMA_VERSION,
+        docType: FOOD_DOC_TYPE,
+        foodId: requireString(attributes.foodId, "foodId", 64),
+        slug: requireString(attributes.slug, "slug", 160),
+        title: requireString(attributes.title, "title", 160),
+        status: normalizeFoodStatus(attributes.status),
+        summary: optionalString(attributes.summary, "summary", 4000),
+        kind: optionalString(attributes.kind, "kind", 160),
+        brand: optionalString(attributes.brand, "brand", 160),
+        vendor: optionalString(attributes.vendor, "vendor", 160),
+        location: optionalString(attributes.location, "location", 160),
+        serving: optionalString(attributes.serving, "serving", 160),
+        aliases: normalizeUniqueTextList(attributes.aliases, "aliases"),
+        ingredients: normalizeUniqueTextList(attributes.ingredients, "ingredients"),
+        tags: normalizeDomainList(attributes.tags, "tags"),
+        note: optionalString(attributes.note, "note", 4000),
+        attachedProtocolIds: relations.attachedProtocolIds,
+        links: relations.links,
+        autoLogDaily: normalizeFoodAutoLogDailyRule(attributes.autoLogDaily),
+        relativePath,
+        markdown,
+    });
+}
+export function foodRecordToBasePayload(record) {
+    const relations = canonicalizeFoodRelations(record);
+    return stripUndefined({
+        slug: record.slug,
+        title: record.title,
+        status: record.status,
+        summary: record.summary,
+        kind: record.kind,
+        brand: record.brand,
+        vendor: record.vendor,
+        location: record.location,
+        serving: record.serving,
+        aliases: record.aliases,
+        ingredients: record.ingredients,
+        tags: record.tags,
+        note: record.note,
+        attachedProtocolIds: relations.attachedProtocolIds,
+        links: frontmatterLinkObjects(relations.links),
+        autoLogDaily: record.autoLogDaily,
+    });
+}
+function buildAttributes(record) {
+    return stripUndefined({
+        schemaVersion: FOOD_SCHEMA_VERSION,
+        docType: FOOD_DOC_TYPE,
+        foodId: record.foodId,
+        ...foodRecordToBasePayload(record),
+    });
+}
+const foodRegistryApi = createMarkdownRegistryApi({
+    directory: FOODS_DIRECTORY,
+    recordFromParts: parseFoodRecord,
+    isExpectedRecord: (record) => record.docType === FOOD_DOC_TYPE && record.schemaVersion === FOOD_SCHEMA_VERSION,
+    invalidCode: "VAULT_INVALID_FOOD",
+    invalidMessage: "Food registry document has an unexpected shape.",
+    sortRecords: (records) => records.sort((left, right) => left.title.localeCompare(right.title) ||
+        left.slug.localeCompare(right.slug) ||
+        left.foodId.localeCompare(right.foodId)),
+    getRecordId: (record) => record.foodId,
+    getRecordSlug: (record) => record.slug,
+    getRecordRelativePath: (record) => record.relativePath,
+    conflictCode: "VAULT_FOOD_CONFLICT",
+    conflictMessage: "Food id and slug resolve to different records.",
+    readMissingCode: "VAULT_FOOD_MISSING",
+    readMissingMessage: "Food was not found.",
+    createRecordId: () => generateRecordId("food"),
+    operationType: "food_upsert",
+    summary: (recordId) => `Upsert food ${recordId}`,
+    deleteOperationType: "food_delete",
+    deleteSummary: (recordId) => `Delete food ${recordId}`,
+    audit: {
+        action: "food_upsert",
+        commandName: "core.upsertFood",
+        summary: (_created, recordId) => `Upserted food ${recordId}.`,
+    },
+});
+export async function upsertFood(input) {
+    const normalizedFoodId = normalizeId(input.foodId, "foodId", "food");
+    const requestedSlug = normalizeUpsertSelectorSlug(input.slug, input.title);
+    const existingRecord = await foodRegistryApi.resolveExistingRecord({
+        vaultRoot: input.vaultRoot,
+        recordId: normalizedFoodId,
+        slug: requestedSlug,
+    });
+    const title = requireString(input.title ?? existingRecord?.title, "title", 160);
+    return foodRegistryApi.upsertRecord({
+        vaultRoot: input.vaultRoot,
+        existingRecord,
+        recordId: normalizedFoodId,
+        requestedSlug,
+        defaultSlug: normalizeUpsertSelectorSlug(undefined, title) ?? "",
+        allowSlugUpdate: input.allowSlugRename === true,
+        buildDocument: (target) => {
+            const attachedProtocolIds = resolveOptionalUpsertValue(input.attachedProtocolIds, existingRecord?.attachedProtocolIds, (value) => normalizeRecordIdList(value, "attachedProtocolIds", "prot"));
+            const usesRelationInputs = input.links !== undefined ||
+                input.attachedProtocolIds !== undefined;
+            const relations = canonicalizeFoodRelations({
+                links: input.links !== undefined ? input.links : usesRelationInputs ? undefined : existingRecord?.links,
+                attachedProtocolIds,
+            });
+            const attributes = buildAttributes(stripUndefined({
+                schemaVersion: FOOD_SCHEMA_VERSION,
+                docType: FOOD_DOC_TYPE,
+                foodId: target.recordId,
+                slug: target.slug,
+                title,
+                status: resolveRequiredUpsertValue(input.status, existingRecord?.status, "active", normalizeFoodStatus),
+                summary: resolveOptionalUpsertValue(input.summary, existingRecord?.summary, (value) => optionalString(value, "summary", 4000)),
+                kind: resolveOptionalUpsertValue(input.kind, existingRecord?.kind, (value) => optionalString(value, "kind", 160)),
+                brand: resolveOptionalUpsertValue(input.brand, existingRecord?.brand, (value) => optionalString(value, "brand", 160)),
+                vendor: resolveOptionalUpsertValue(input.vendor, existingRecord?.vendor, (value) => optionalString(value, "vendor", 160)),
+                location: resolveOptionalUpsertValue(input.location, existingRecord?.location, (value) => optionalString(value, "location", 160)),
+                serving: resolveOptionalUpsertValue(input.serving, existingRecord?.serving, (value) => optionalString(value, "serving", 160)),
+                aliases: resolveOptionalUpsertValue(input.aliases, existingRecord?.aliases, (value) => normalizeUniqueTextList(value, "aliases")),
+                ingredients: resolveOptionalUpsertValue(input.ingredients, existingRecord?.ingredients, (value) => normalizeUniqueTextList(value, "ingredients")),
+                tags: resolveOptionalUpsertValue(input.tags, existingRecord?.tags, (value) => normalizeDomainList(value, "tags")),
+                note: resolveOptionalUpsertValue(input.note, existingRecord?.note, (value) => optionalString(value, "note", 4000)),
+                attachedProtocolIds: relations.attachedProtocolIds,
+                links: relations.links,
+                autoLogDaily: resolveOptionalUpsertValue(input.autoLogDaily, existingRecord?.autoLogDaily, (value) => normalizeFoodAutoLogDailyRule(value)),
+            }));
+            return buildDocumentFromAttributes({
+                attributes,
+                relativePath: target.relativePath,
+                markdown: existingRecord?.markdown,
+                buildBody,
+            });
+        },
+    });
+}
+export async function listFoods(vaultRoot) {
+    return foodRegistryApi.listRecords(vaultRoot);
+}
+export async function readFood({ vaultRoot, foodId, slug }) {
+    const normalizedFoodId = normalizeId(foodId, "foodId", "food");
+    const normalizedSlug = normalizeSelectorSlug(slug);
+    return foodRegistryApi.readRecord({
+        vaultRoot,
+        recordId: normalizedFoodId,
+        slug: normalizedSlug,
+    });
+}
+export async function deleteFood({ vaultRoot, foodId, slug }) {
+    const normalizedFoodId = normalizeId(foodId, "foodId", "food");
+    const normalizedSlug = normalizeSelectorSlug(slug);
+    const result = await foodRegistryApi.deleteRecord({
+        vaultRoot,
+        recordId: normalizedFoodId,
+        slug: normalizedSlug,
+    });
+    return {
+        foodId: result.record.foodId,
+        relativePath: result.record.relativePath,
+        deleted: true,
+    };
+}
+//# sourceMappingURL=foods.js.map

package/node_modules/@murphai/core/dist/bank/foods.js.map

@@ -0,0 +1 @@
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package/node_modules/@murphai/core/dist/bank/goals.d.ts

@@ -0,0 +1,5 @@
+import type { GoalStoredDocument, ReadGoalInput, UpsertGoalInput, UpsertGoalResult } from "./types.ts";
+export declare function upsertGoal(input: UpsertGoalInput): Promise<UpsertGoalResult>;
+export declare function listGoals(vaultRoot: string): Promise<GoalStoredDocument[]>;
+export declare function readGoal({ vaultRoot, goalId, slug, }: ReadGoalInput): Promise<GoalStoredDocument>;
+//# sourceMappingURL=goals.d.ts.map

package/node_modules/@murphai/core/dist/bank/goals.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"goals.d.ts","sourceRoot":"","sources":["../../src/bank/goals.ts"],"names":[],"mappings":"AAyCA,OAAO,KAAK,EAIV,kBAAkB,EAElB,aAAa,EACb,eAAe,EACf,gBAAgB,EACjB,MAAM,YAAY,CAAC;AAuSpB,wBAAsB,UAAU,CAAC,KAAK,EAAE,eAAe,GAAG,OAAO,CAAC,gBAAgB,CAAC,CA+ElF;AAED,wBAAsB,SAAS,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,EAAE,CAAC,CAEhF;AAED,wBAAsB,QAAQ,CAAC,EAC7B,SAAS,EACT,MAAM,EACN,IAAI,GACL,EAAE,aAAa,GAAG,OAAO,CAAC,kBAAkB,CAAC,CAQ7C"}