@morscherlab/mint-sdk 1.3.0-beta.4 → 1.3.0-beta.5

package/dist/types/auth.d.ts

@@ -16,34 +16,3 @@ export interface UserInfo {
     roleObj?: RoleInfo | null;
     isActive: boolean;
 }
-export interface LoginResponse {
-    access_token: string;
-    token_type: string;
-    expires_in: number;
-}
-export interface TokenVerifyResponse {
-    valid: boolean;
-    username: string | null;
-    expires_at: string | null;
-    /** Platform 1.3+: `access_token` for a personal access token. */
-    token_type?: 'session' | 'access_token';
-    /** Platform 1.3+: true for a read-only personal access token. */
-    read_only?: boolean;
-}
-export interface RegisterRequest {
-    username: string;
-    password: string;
-    email?: string;
-    shortname?: string;
-}
-export interface UpdateProfileRequest {
-    email?: string;
-    shortname?: string;
-    current_password?: string;
-    new_password?: string;
-}
-export interface CredentialInfo {
-    credential_id: string;
-    device_name: string | null;
-    created_at: string;
-}

package/dist/types/index.d.ts

@@ -9,6 +9,6 @@ export type { LcmsContainerType, LcmsPolarity, LcmsSequenceItem, LcmsSequenceTab
 export type { AccessAudience, AccessAudienceInput, AccessPolicy, AccessControlled, PermissionUser, RoleInfo, } from '../permissions';
 export type { FormFieldType, FieldCondition, FieldValidation, FormFieldSchema, FormOptionInput, FormSectionSchema, FormStepSchema, FormSchema, FieldEnhancement, FormEnhancements, UseFormBuilderReturn, } from './form-builder';
 export type { OutlierAction, InputMode, OutlierInfo, ColumnInfo, MetadataRow, AutoGroupResult, ParsedCsvData, } from './auto-group';
-export type { AuthConfig, UserInfo, LoginResponse, TokenVerifyResponse, RegisterRequest, UpdateProfileRequest, CredentialInfo, } from './auth';
+export type { AuthConfig, UserInfo, } from './auth';
 export type { PluginInfo, PluginNavItem, PluginSettings, PluginSettingField, PlatformContext, PlatformContextOptions, PlatformEventType, PlatformEvent, ThemeMode, ColorPalette, TableDensity, UserSummary, } from './platform';
 export type * from './filePicker';

package/dist/utils/rack.d.ts

@@ -1,9 +1,9 @@
 import { Rack, SlotPosition, WellEditData, WellPlateFormat } from '../types';
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export type LcmsPlateType = '96well' | '54vial';
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export type LcmsControlSampleType = 'blank' | 'qc' | 'iqc';
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export interface LcmsPlateCell {
     row: string;
     column: number;
@@ -14,7 +14,7 @@ export interface LcmsPlateCell {
     custom_method?: string | null;
     slot?: SlotPosition | null;
 }
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export interface LcmsPlateCellsToRackOptions {
     rackId?: string;
     rackName?: string;
@@ -23,39 +23,39 @@ export interface LcmsPlateCellsToRackOptions {
     slot?: SlotPosition;
     injectionVolume?: number;
 }
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export interface LcmsPlateCellsToRacksOptions extends Omit<LcmsPlateCellsToRackOptions, 'rackId' | 'rackName' | 'slot'> {
     defaultSlot?: SlotPosition;
     rackId?: (slot: SlotPosition, index: number) => string;
     rackName?: (slot: SlotPosition, index: number) => string;
 }
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare const LCMS_DEFAULT_CONTROL_POSITIONS: Record<LcmsPlateType, Record<LcmsControlSampleType, {
     row: string;
     column: number;
 }>>;
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsPlateTypeToRackFormat(plateType: LcmsPlateType): WellPlateFormat;
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function rackFormatToLcmsPlateType(format: WellPlateFormat): LcmsPlateType;
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsWellId(row: string, column: number): string;
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function parseLcmsWellId(wellId: string): {
     row: string;
     column: number;
 };
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsPlateCellsToRack(cells: LcmsPlateCell[], options?: LcmsPlateCellsToRackOptions): Rack;
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function lcmsPlateCellsToRacks(cells: LcmsPlateCell[], options?: LcmsPlateCellsToRacksOptions): Rack[];
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function rackToLcmsPlateCells(rack: Rack): LcmsPlateCell[];
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function racksToLcmsPlateCells(racks: Rack[]): LcmsPlateCell[];
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function getLcmsDefaultControlWellId(plateType: LcmsPlateType, sampleType: LcmsControlSampleType): string;
-/** @deprecated Scheduled for removal in MINT 1.4; LC-MS helpers move to the mld-ms plugins. */
+/** @deprecated Scheduled for removal in MINT 1.4; no SDK replacement. */
 export declare function createLcmsControlWellEditData(sampleType: LcmsControlSampleType, options?: {
     wellId?: string;
     plateType?: LcmsPlateType;

package/dist/{validation-B4Y8_eEe.js → validation-DILksa0c.js}

@@ -1,6 +1,6 @@
 import { o as useSettingsStore } from "./settings-BLr8lzw6.js";
 import { d as resolveExperimentCode, o as datePresetToISO } from "./experiment-utils-DTANyVKV.js";
-import { $t as getBioTemplatePackInfo, An as getControlDefaults, B as toBioTemplateComponentProps, Bn as getDefaultControlView, Er as PLUGIN_SECRET_FORMAT_KEY, F as getBioTemplateComponentProps$1, Gn as getFieldRegistryEntry, H as toBioTemplateComponentPropsById, Hn as omitUndefined, Kn as getTypeDefault, L as toBioTemplateComponentBindings, P as getBioTemplateComponentBindings, R as toBioTemplateComponentBindingsById, Tn as deriveShade, U as toBioTemplateComponentSnippets, Un as recordValue, V as toBioTemplateComponentPropsByComponent$1, Vn as normalizeControlDefinition, W as toBioTemplateComponentUsage, Wn as replaceRecord$1, Yn as useConcentrationUnits, Yt as getBioTemplatePresetInfo, ar as getInjectedPlatformContext, bn as rowIndex, br as isRecord, cn as createTemplateCollection, d as createBioTemplatePresetCollectionFromControls, dn as ensureTemplateFromCollection, fn as extractTemplateCollection, fr as isActiveJobStatus, gr as normalizeJobState, i as createBioTemplateControlToolkit, ir as currentExperimentFromContext, jn as useControlSchema, mn as PLATE_CONFIGS, or as parseExperimentId, p as createBioTemplatePackCollection, sr as resolveCurrentExperimentId, u as createBioTemplatePresetCollection, vr as useEventStream, xn as rowLabel, z as toBioTemplateComponentImports, zn as controlsToViewItems } from "./templates-Bj9hZ7iV.js";
+import { $t as getBioTemplatePackInfo, An as getControlDefaults, B as toBioTemplateComponentProps, Bn as getDefaultControlView, Er as PLUGIN_SECRET_FORMAT_KEY, F as getBioTemplateComponentProps$1, Gn as getFieldRegistryEntry, H as toBioTemplateComponentPropsById, Hn as omitUndefined, Kn as getTypeDefault, L as toBioTemplateComponentBindings, P as getBioTemplateComponentBindings, R as toBioTemplateComponentBindingsById, Tn as deriveShade, U as toBioTemplateComponentSnippets, Un as recordValue, V as toBioTemplateComponentPropsByComponent$1, Vn as normalizeControlDefinition, W as toBioTemplateComponentUsage, Wn as replaceRecord$1, Yn as useConcentrationUnits, Yt as getBioTemplatePresetInfo, ar as getInjectedPlatformContext, bn as rowIndex, br as isRecord, cn as createTemplateCollection, d as createBioTemplatePresetCollectionFromControls, dn as ensureTemplateFromCollection, fn as extractTemplateCollection, fr as isActiveJobStatus, gr as normalizeJobState, i as createBioTemplateControlToolkit, ir as currentExperimentFromContext, jn as useControlSchema, mn as PLATE_CONFIGS, or as parseExperimentId, p as createBioTemplatePackCollection, sr as resolveCurrentExperimentId, u as createBioTemplatePresetCollection, vr as useEventStream, xn as rowLabel, z as toBioTemplateComponentImports, zn as controlsToViewItems } from "./templates-DgAG5kMq.js";
 import { a as useApi, i as authenticationRequiredError, n as readErrorMessage, o as useAuthStore, r as AuthenticationRequiredError, t as useExperimentStore } from "./experiment-DgllIc3I.js";
 import { computed, effectScope, getCurrentScope, inject, nextTick, onMounted, onScopeDispose, onUnmounted, provide, reactive, readonly, ref, shallowRef, toRaw, toValue, unref, watch } from "vue";
 //#region src/composables/useRovingFocus.ts
@@ -4777,7 +4777,7 @@ function warnDeprecated(api) {
 /**
 * Sample-grouping engine behind `AutoGroupModal`.
 *
-* @deprecated Scheduled for removal in MINT 1.4; use `SmartGroupModal` instead.
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
 */
 function useAutoGroup() {
 	const inputMode = ref("paste");
@@ -5972,7 +5972,11 @@ function clampRange(start, end, min, max) {
 }
 //#endregion
 //#region src/composables/useExperimentSave.ts
-/** Persists experiment design, analysis, and built-in template preset data through the platform API. */
+/**
+* Persists experiment design, analysis, and built-in template preset data through the platform API.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useExperimentSave(options = {}) {
 	const injectedContext = getInjectedPlatformContext();
 	const api = useApi({ baseUrl: options.apiBaseUrl ?? injectedContext?.platformApiUrl });
@@ -6170,7 +6174,11 @@ function useExperimentSave(options = {}) {
 }
 //#endregion
 //#region src/composables/useTemplateCollection.ts
-/** Manages a biology template collection in the current experiment's design_data. */
+/**
+* Manages a biology template collection in the current experiment's design_data.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useTemplateCollection(options = {}) {
 	const experimentSave = useExperimentSave(options);
 	const templateCollection = ref(createInitialCollection(options));
@@ -6266,7 +6274,11 @@ function readCollectionMetadata(value) {
 }
 //#endregion
 //#region src/composables/useBioTemplateControls.ts
-/** Build FormBuilder schema, AppSidebar panels, and defaults for a built-in biology template or preset. */
+/**
+* Build FormBuilder schema, AppSidebar panels, and defaults for a built-in biology template or preset.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useBioTemplateControls(target, options = {}) {
 	const { initialValues, topBarSettings: _topBarSettings, ...schemaOptions } = options;
 	const controls = createBioTemplateControlToolkit(target, schemaOptions);
@@ -6281,15 +6293,27 @@ function useBioTemplateControls(target, options = {}) {
 }
 //#endregion
 //#region src/composables/useBioTemplateComponents.ts
-/** Return component props grouped by SDK component name for direct WellPlate/DoseCalculator binding. */
+/**
+* Return component props grouped by SDK component name for direct WellPlate/DoseCalculator binding.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function toBioTemplateComponentPropsByComponent(target) {
 	return toBioTemplateComponentPropsByComponent$1(target);
 }
-/** Return the first props object for an SDK component, optionally restricted by template id or binding id. */
+/**
+* Return the first props object for an SDK component, optionally restricted by template id or binding id.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function getBioTemplateComponentProps(target, component, options = {}) {
 	return getBioTemplateComponentProps$1(target, component, options);
 }
-/** Map built-in biology templates to SDK components such as WellPlate, DataFrame, DoseCalculator, and PlateEditor. */
+/**
+* Map built-in biology templates to SDK components such as WellPlate, DataFrame, DoseCalculator, and PlateEditor.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useBioTemplateComponents(target) {
 	return {
 		bindings: getBioTemplateComponentBindings(target),
@@ -6357,7 +6381,11 @@ function liftWorkspaceComponentBindings(workspace) {
 }
 //#endregion
 //#region src/composables/useBioTemplateWorkspace.ts
-/** One-stop wiring for BioTemplateRenderer, FormBuilder, AppSidebar, and template-aware SDK components. */
+/**
+* One-stop wiring for BioTemplateRenderer, FormBuilder, AppSidebar, and template-aware SDK components.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useBioTemplateWorkspace(target, options = {}) {
 	const controls = useBioTemplateControls(target, options);
 	const workspace = useControlWorkspace(controls.controls, options);
@@ -6414,6 +6442,8 @@ function isTemplateObjectTarget(target) {
 * const pack = useBioTemplatePackWorkspace('cell-culture-screen')
 * await pack.loadCurrent()
 * ```
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
 */
 function useBioTemplatePackWorkspace(packId, options = {}) {
 	const pack = getBioTemplatePackInfo(packId);
@@ -6494,7 +6524,11 @@ function useBioTemplatePackWorkspace(packId, options = {}) {
 }
 //#endregion
 //#region src/composables/useBioTemplatePresetWorkspace.ts
-/** Create a complete editable WellPlate/DoseCalculator workspace for dose design from a built-in biology template preset with current-experiment save wiring. */
+/**
+* Create a complete editable WellPlate/DoseCalculator workspace for dose design from a built-in biology template preset with current-experiment save wiring.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useBioTemplatePresetWorkspace(presetId, options = {}) {
 	const { controlOptions, initialValues, ...collectionOptions } = options;
 	const resolvedControlOptions = mergeInitialValues(controlOptions, initialValues);
@@ -6665,7 +6699,11 @@ function mergeInitialValues(controlOptions, initialValues) {
 }
 //#endregion
 //#region src/composables/useGroupAssignment.ts
-/** Shared two-zone group assignment model for control/treatment style workflows. */
+/**
+* Shared two-zone group assignment model for control/treatment style workflows.
+*
+* @deprecated Scheduled for removal in MINT 1.4; no SDK replacement.
+*/
 function useGroupAssignment(options) {
 	const groups = computed(() => [...toValue(options.groups)]);
 	const group1 = computed(() => [...toValue(options.group1)]);
@@ -7822,4 +7860,4 @@ function pickerFormat(name) {
 //#endregion
 export { pluginFormDataFromPayload as $, parseDelimitedText as A, getPresenceClientId as At, useRackEditor as B, useRovingFocus as Bt, useExperimentSamples as C, controlValuesToComponentBindingsById as Ct, getSampleGroupMajorPrefix as D, useAppExperiment as Dt, useSampleGroups as E, APP_EXPERIMENT_KEY as Et, useAutoGroup as F, candidateMatchesSearch as Ft, useDoseCalculator as G, reorderList as H, extractSampleNamesFromDesignData as I, normalizeSearchQuery as It, usePluginJobCenter as J, combinePluginJobSources as K, extractSampleOptionsFromDesignData as L, useTextSearch as Lt, useFileImport as M, usePlatformContext as Mt, validateImportFile as N, useTheme as Nt, getSampleGroupParentPath as O, getInjectedFrontendRevision as Ot, extractSamplesFromDesignData as P, useToast as Pt, getPluginPageSelectorItems as Q, unwrapExperimentDesignData as R, compareSortValues as Rt, useScheduleDrag as S, controlValuesToComponentBindings as St, useExpansionSet as T, mergeControlWorkspaceOptions as Tt, useListReorder as U, REORDER_ANNOUNCER_STYLE as V, useReorderAnnouncer as W, downloadBlob as X, createPluginClient as Y, downloadPluginEndpoint as Z, toBioTemplateComponentPropsByComponent as _, defineWellPlateDoseComponentBindings as _t, useExperimentSelector as a, buildPluginEndpointUrl as at, useTemplateCollection as b, defineControlModel as bt, DEFAULT_PRESETS as c, usePluginWorkspace as ct, useReagentSeries as d, useFormBuilder as dt, uploadPluginEndpoint as et, useGroupAssignment as f, evaluateCondition as ft, getBioTemplateComponentProps as g, defineWellPlateControlProps as gt, useBioTemplateWorkspace as h, defineDoseDesignControlModel as ht, useAnalysisArtifacts as i, usePluginSettings as it, readFileAsText as j, usePresenceHeartbeat as jt, detectDelimiter as k, useRuntimeAlignment as kt, DEFAULT_UNITS as l, DEFAULT_MOBILE_VIEWPORT_QUERY as lt, useBioTemplatePackWorkspace as m, defineDoseCalculatorControlProps as mt, pickerFormat as n, usePluginClient as nt, useDebouncedWatch as o, resolvePluginBaseUrl as ot, useBioTemplatePresetWorkspace as p, useForm as pt, useJobsStatusTray as q, pickerReason as r, usePluginEventStream as rt, useProtocolTemplates as s, useRequestSyncState as st, pickerExclusion as t, useCurrentExperiment as tt, generateDilutionSeries as u, useMobileSupportGate as ut, useBioTemplateComponents as v, defineWellPlateDoseControlProps as vt, useExperimentData as w, controlValuesToComponentProps as wt, useExperimentSave as x, resolveControlModel as xt, useBioTemplateControls as y, useControlWorkspace as yt, DEFAULT_COLORS as z, useSortedItems as zt };
 
-//# sourceMappingURL=validation-B4Y8_eEe.js.map
+//# sourceMappingURL=validation-DILksa0c.js.map