@morscherlab/mint-sdk 1.0.0-beta.7 → 1.0.0-rc.2

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Files changed (163) hide show
  1. package/README.md +9 -1
  2. package/dist/__tests__/components/LcmsSequenceTable.test.d.ts +1 -0
  3. package/dist/__tests__/components/ProgressBar.test.d.ts +1 -0
  4. package/dist/__tests__/components/RackEditor.test.d.ts +1 -0
  5. package/dist/__tests__/components/SequenceProgressBar.test.d.ts +1 -0
  6. package/dist/__tests__/composables/useExperimentSamples.test.d.ts +1 -0
  7. package/dist/__tests__/composables/useProtocolTemplates.test.d.ts +1 -0
  8. package/dist/__tests__/stores/settings.test.d.ts +1 -0
  9. package/dist/__tests__/utils/instrument.test.d.ts +1 -0
  10. package/dist/__tests__/utils/lcms.test.d.ts +1 -0
  11. package/dist/__tests__/utils/permissions.test.d.ts +1 -0
  12. package/dist/__tests__/utils/rack.test.d.ts +1 -0
  13. package/dist/{auth-QQj2kkze.js → auth-B7g4J4ZF.js} +148 -24
  14. package/dist/auth-B7g4J4ZF.js.map +1 -0
  15. package/dist/components/AutoGroupModal.vue.d.ts +1 -1
  16. package/dist/components/BaseCheckbox.vue.d.ts +1 -1
  17. package/dist/components/BaseToggle.vue.d.ts +2 -2
  18. package/dist/components/BioTemplateExperimentWorkspaceView.vue.d.ts +1 -1
  19. package/dist/components/BioTemplatePackWorkspaceView.vue.d.ts +1 -1
  20. package/dist/components/BioTemplatePresetWorkspaceView.vue.d.ts +1 -1
  21. package/dist/components/DoseDesignWorkspaceView.vue.d.ts +1 -1
  22. package/dist/components/FormulaInput.vue.d.ts +1 -1
  23. package/dist/components/InstrumentAlertLog.vue.d.ts +22 -0
  24. package/dist/components/InstrumentStateBadge.vue.d.ts +11 -0
  25. package/dist/components/InstrumentStatusCard.vue.d.ts +13 -0
  26. package/dist/components/LcmsSequenceTable.vue.d.ts +26 -0
  27. package/dist/components/ProgressBar.vue.d.ts +1 -0
  28. package/dist/components/RackEditor.vue.d.ts +41 -3
  29. package/dist/components/ReagentList.vue.d.ts +1 -1
  30. package/dist/components/SampleSelector.vue.d.ts +5 -2
  31. package/dist/components/SegmentedControl.vue.d.ts +2 -0
  32. package/dist/components/SequenceInput.vue.d.ts +1 -1
  33. package/dist/components/SequenceProgressBar.vue.d.ts +15 -0
  34. package/dist/components/SettingsModal.vue.d.ts +8 -1
  35. package/dist/components/TagsInput.vue.d.ts +1 -1
  36. package/dist/components/WellPlate.vue.d.ts +42 -3
  37. package/dist/components/index.d.ts +5 -0
  38. package/dist/components/index.js +3 -3
  39. package/dist/{components-DihbSJjU.js → components-BhK-dW99.js} +2135 -1075
  40. package/dist/components-BhK-dW99.js.map +1 -0
  41. package/dist/composables/experimentDesignData.d.ts +17 -0
  42. package/dist/composables/index.d.ts +2 -0
  43. package/dist/composables/index.js +4 -4
  44. package/dist/composables/useControlSchema.d.ts +11 -0
  45. package/dist/composables/useExperimentData.d.ts +11 -3
  46. package/dist/composables/useExperimentSamples.d.ts +42 -0
  47. package/dist/composables/usePlatformContext.d.ts +54 -0
  48. package/dist/{composables-BcgZ6diz.js → composables-Bg7CFuNz.js} +5 -3
  49. package/dist/composables-Bg7CFuNz.js.map +1 -0
  50. package/dist/index.d.ts +4 -0
  51. package/dist/index.js +168 -6
  52. package/dist/index.js.map +1 -0
  53. package/dist/install.js +2 -2
  54. package/dist/instrument.d.ts +7 -0
  55. package/dist/lcms.d.ts +27 -0
  56. package/dist/permissions.d.ts +46 -0
  57. package/dist/stores/auth.d.ts +74 -2
  58. package/dist/stores/index.js +1 -1
  59. package/dist/styles.css +3186 -1070
  60. package/dist/templates/builders.d.ts +7 -3
  61. package/dist/templates/index.d.ts +2 -2
  62. package/dist/templates/index.js +2 -2
  63. package/dist/templates/presets.d.ts +12 -0
  64. package/dist/templates/types.d.ts +16 -1
  65. package/dist/{templates-Cyt0Suwf.js → templates-BorLR_7p.js} +324 -10
  66. package/dist/templates-BorLR_7p.js.map +1 -0
  67. package/dist/types/auth.d.ts +2 -0
  68. package/dist/types/components.d.ts +32 -3
  69. package/dist/types/form-builder.d.ts +2 -1
  70. package/dist/types/index.d.ts +4 -1
  71. package/dist/types/instrument.d.ts +56 -0
  72. package/dist/types/platform.d.ts +3 -0
  73. package/dist/{useExperimentData-CM6Y0u5L.js → useProtocolTemplates-n6AJqSqv.js} +627 -380
  74. package/dist/useProtocolTemplates-n6AJqSqv.js.map +1 -0
  75. package/dist/utils/rack.d.ts +47 -0
  76. package/package.json +1 -1
  77. package/src/__tests__/components/AppTopBar.test.ts +15 -0
  78. package/src/__tests__/components/BaseTabs.test.ts +15 -0
  79. package/src/__tests__/components/GroupAssigner.test.ts +18 -0
  80. package/src/__tests__/components/LcmsSequenceTable.test.ts +57 -0
  81. package/src/__tests__/components/ProgressBar.test.ts +18 -0
  82. package/src/__tests__/components/RackEditor.test.ts +125 -0
  83. package/src/__tests__/components/SampleSelector.test.ts +25 -0
  84. package/src/__tests__/components/SegmentedControl.test.ts +45 -0
  85. package/src/__tests__/components/SequenceProgressBar.test.ts +39 -0
  86. package/src/__tests__/components/SettingsModal.test.ts +83 -2
  87. package/src/__tests__/composables/useApi.test.ts +45 -0
  88. package/src/__tests__/composables/useAuth.test.ts +20 -0
  89. package/src/__tests__/composables/useControlSchema.test.ts +4 -0
  90. package/src/__tests__/composables/useExperimentData.test.ts +23 -0
  91. package/src/__tests__/composables/useExperimentSamples.test.ts +91 -0
  92. package/src/__tests__/composables/useProtocolTemplates.test.ts +64 -0
  93. package/src/__tests__/stores/settings.test.ts +78 -0
  94. package/src/__tests__/templates/templates.test.ts +86 -0
  95. package/src/__tests__/utils/instrument.test.ts +47 -0
  96. package/src/__tests__/utils/lcms.test.ts +73 -0
  97. package/src/__tests__/utils/permissions.test.ts +50 -0
  98. package/src/__tests__/utils/rack.test.ts +120 -0
  99. package/src/components/AppAvatarMenu.vue +6 -3
  100. package/src/components/AppTopBar.vue +16 -10
  101. package/src/components/AuditTrail.vue +1 -1
  102. package/src/components/BaseTabs.vue +22 -1
  103. package/src/components/Calendar.vue +6 -2
  104. package/src/components/ConcentrationInput.vue +3 -2
  105. package/src/components/GroupAssigner.vue +8 -3
  106. package/src/components/InstrumentAlertLog.vue +191 -0
  107. package/src/components/InstrumentStateBadge.vue +50 -0
  108. package/src/components/InstrumentStatusCard.vue +188 -0
  109. package/src/components/LcmsSequenceTable.vue +191 -0
  110. package/src/components/NumberInput.vue +5 -3
  111. package/src/components/ProgressBar.vue +3 -0
  112. package/src/components/RackEditor.vue +73 -2
  113. package/src/components/SampleHierarchyTree.vue +3 -2
  114. package/src/components/SampleSelector.vue +28 -9
  115. package/src/components/SegmentedControl.story.vue +17 -0
  116. package/src/components/SegmentedControl.vue +14 -3
  117. package/src/components/SequenceProgressBar.vue +71 -0
  118. package/src/components/SettingsModal.vue +49 -2
  119. package/src/components/UnitInput.vue +6 -2
  120. package/src/components/WellPlate.vue +145 -24
  121. package/src/components/index.ts +5 -0
  122. package/src/components/internal/WellEditPopupInternal.vue +1 -0
  123. package/src/composables/experimentDesignData.ts +182 -0
  124. package/src/composables/index.ts +14 -0
  125. package/src/composables/useApi.ts +113 -16
  126. package/src/composables/useAuth.ts +4 -0
  127. package/src/composables/useAutoGroup.ts +18 -9
  128. package/src/composables/useControlSchema.ts +21 -0
  129. package/src/composables/useExperimentData.ts +57 -16
  130. package/src/composables/useExperimentSamples.ts +142 -0
  131. package/src/composables/useProtocolTemplates.ts +13 -1
  132. package/src/composables/useRackEditor.ts +3 -2
  133. package/src/index.ts +27 -0
  134. package/src/instrument.ts +90 -0
  135. package/src/lcms.ts +108 -0
  136. package/src/permissions.ts +143 -0
  137. package/src/stores/auth.ts +79 -26
  138. package/src/stores/settings.ts +10 -0
  139. package/src/styles/components/instrument-monitor.css +478 -0
  140. package/src/styles/components/lcms-sequence-table.css +189 -0
  141. package/src/styles/components/sequence-progress-bar.css +63 -0
  142. package/src/styles/components/settings-modal.css +9 -0
  143. package/src/styles/components/tabs.css +9 -0
  144. package/src/styles/components/well-edit-popup.css +7 -1
  145. package/src/styles/components/well-plate.css +5 -0
  146. package/src/styles/index.css +3 -0
  147. package/src/templates/builders.ts +201 -0
  148. package/src/templates/controlSchemas.ts +68 -0
  149. package/src/templates/index.ts +2 -0
  150. package/src/templates/presets.ts +23 -0
  151. package/src/templates/types.ts +17 -0
  152. package/src/types/auth.ts +3 -0
  153. package/src/types/components.ts +45 -3
  154. package/src/types/form-builder.ts +2 -1
  155. package/src/types/index.ts +35 -0
  156. package/src/types/instrument.ts +61 -0
  157. package/src/types/platform.ts +4 -0
  158. package/src/utils/rack.ts +209 -0
  159. package/dist/auth-QQj2kkze.js.map +0 -1
  160. package/dist/components-DihbSJjU.js.map +0 -1
  161. package/dist/composables-BcgZ6diz.js.map +0 -1
  162. package/dist/templates-Cyt0Suwf.js.map +0 -1
  163. package/dist/useExperimentData-CM6Y0u5L.js.map +0 -1
@@ -1,4 +1,4 @@
1
- import { AssayMatrixTemplate, AssayMatrixTemplateData, BioTemplateEnvelope, CalibrationCurveTemplate, CalibrationCurveTemplateData, CreateBioTemplatePackCollectionOptions, CreateElisaAssayCollectionOptions, CreateLcmsBatchCollectionOptions, CreateAssayMatrixTemplateOptions, CreateCalibrationCurveTemplateOptions, CreateDoseResponseTemplateOptions, CreateFlowCytometryAssayCollectionOptions, CreateWesternBlotAssayCollectionOptions, CreateFlowCytometryPanelTemplateOptions, CreateInstrumentRunTemplateOptions, CreatePlateMapTemplateOptions, CreateProtocolStepsTemplateOptions, CreateQpcrExpressionCollectionOptions, CreateQpcrPlateTemplateOptions, CreateReagentListTemplateOptions, CreateSampleSheetTemplateOptions, CreateSamplePrepTemplateOptions, CreateTimeCourseTemplateOptions, CreateWellPlateScreenCollectionOptions, DoseResponseTemplate, DoseResponseTemplateData, FlowCytometryPanelTemplate, FlowCytometryPanelTemplateData, InstrumentRunTemplate, InstrumentRunTemplateData, PlateMapTemplate, PlateMapTemplateData, ProtocolStepsTemplate, ProtocolStepsTemplateData, QpcrPlateTemplate, QpcrPlateTemplateData, ReagentListTemplate, ReagentListTemplateData, TimeCourseTemplate, TimeCourseTemplateData, SampleSheetTemplate, SampleSheetTemplateData, SamplePrepTemplate, SamplePrepTemplateData, TemplateCollection, TemplateCollectionEnvelope, TemplateId, TemplatePackId, TemplatePresetId } from './types';
1
+ import { AssayMatrixTemplate, AssayMatrixTemplateData, BioTemplateEnvelope, CalibrationCurveTemplate, CalibrationCurveTemplateData, CreateBioTemplatePackCollectionOptions, CreateElisaAssayCollectionOptions, CreateLcmsBatchCollectionOptions, CreateTargetedMetabolomicsCollectionOptions, CreateAssayMatrixTemplateOptions, CreateCalibrationCurveTemplateOptions, CreateDoseResponseTemplateOptions, CreateFlowCytometryAssayCollectionOptions, CreateWesternBlotAssayCollectionOptions, CreateFlowCytometryPanelTemplateOptions, CreateInstrumentRunTemplateOptions, CreatePlateMapTemplateOptions, CreateProtocolStepsTemplateOptions, CreateQpcrExpressionCollectionOptions, CreateQpcrPlateTemplateOptions, CreateReagentListTemplateOptions, CreateSampleSheetTemplateOptions, CreateSamplePrepTemplateOptions, CreateTimeCourseTemplateOptions, CreateWellPlateScreenCollectionOptions, DoseResponseTemplate, DoseResponseTemplateData, FlowCytometryPanelTemplate, FlowCytometryPanelTemplateData, InstrumentRunTemplate, InstrumentRunTemplateData, PlateMapTemplate, PlateMapTemplateData, ProtocolStepsTemplate, ProtocolStepsTemplateData, QpcrPlateTemplate, QpcrPlateTemplateData, ReagentListTemplate, ReagentListTemplateData, TimeCourseTemplate, TimeCourseTemplateData, SampleSheetTemplate, SampleSheetTemplateData, SamplePrepTemplate, SamplePrepTemplateData, TemplateCollection, TemplateCollectionEnvelope, TemplateId, TemplatePackId, TemplatePresetId } from './types';
2
2
  export declare const TEMPLATE_COLLECTION_KEY = "templates";
3
3
  export declare function createTemplateEnvelope<TData>(templateId: TemplateId, data: TData, metadata?: Record<string, unknown>, templateVersion?: string): BioTemplateEnvelope<TData>;
4
4
  export declare function createPlateMapTemplate(options?: CreatePlateMapTemplateOptions): PlateMapTemplate;
@@ -18,27 +18,31 @@ export declare function createBioTemplatePackCollection(name: TemplatePackId | s
18
18
  export declare function createWellPlateScreenCollection(options?: CreateWellPlateScreenCollectionOptions): TemplateCollectionEnvelope;
19
19
  export declare function createQpcrExpressionCollection(options?: CreateQpcrExpressionCollectionOptions): TemplateCollectionEnvelope;
20
20
  export declare function createLcmsBatchCollection(options?: CreateLcmsBatchCollectionOptions): TemplateCollectionEnvelope;
21
+ export declare function createTargetedMetabolomicsCollection(options?: CreateTargetedMetabolomicsCollectionOptions): TemplateCollectionEnvelope;
21
22
  export declare function createElisaAssayCollection(options?: CreateElisaAssayCollectionOptions): TemplateCollectionEnvelope;
22
23
  export declare function createFlowCytometryAssayCollection(options?: CreateFlowCytometryAssayCollectionOptions): TemplateCollectionEnvelope;
23
24
  export declare function createWesternBlotAssayCollection(options?: CreateWesternBlotAssayCollectionOptions): TemplateCollectionEnvelope;
24
25
  export declare function createBioTemplatePresetCollection(name: 'wellplate-screen', options?: CreateWellPlateScreenCollectionOptions): TemplateCollectionEnvelope;
25
26
  export declare function createBioTemplatePresetCollection(name: 'qpcr-expression', options?: CreateQpcrExpressionCollectionOptions): TemplateCollectionEnvelope;
26
27
  export declare function createBioTemplatePresetCollection(name: 'lcms-batch', options?: CreateLcmsBatchCollectionOptions): TemplateCollectionEnvelope;
28
+ export declare function createBioTemplatePresetCollection(name: 'targeted-metabolomics', options?: CreateTargetedMetabolomicsCollectionOptions): TemplateCollectionEnvelope;
27
29
  export declare function createBioTemplatePresetCollection(name: 'elisa-assay', options?: CreateElisaAssayCollectionOptions): TemplateCollectionEnvelope;
28
30
  export declare function createBioTemplatePresetCollection(name: 'flow-cytometry-assay', options?: CreateFlowCytometryAssayCollectionOptions): TemplateCollectionEnvelope;
29
31
  export declare function createBioTemplatePresetCollection(name: 'western-blot-assay', options?: CreateWesternBlotAssayCollectionOptions): TemplateCollectionEnvelope;
30
- export declare function createBioTemplatePresetCollection(name: string, options?: CreateWellPlateScreenCollectionOptions | CreateQpcrExpressionCollectionOptions | CreateLcmsBatchCollectionOptions | CreateElisaAssayCollectionOptions | CreateFlowCytometryAssayCollectionOptions | CreateWesternBlotAssayCollectionOptions): TemplateCollectionEnvelope;
32
+ export declare function createBioTemplatePresetCollection(name: string, options?: CreateWellPlateScreenCollectionOptions | CreateQpcrExpressionCollectionOptions | CreateLcmsBatchCollectionOptions | CreateTargetedMetabolomicsCollectionOptions | CreateElisaAssayCollectionOptions | CreateFlowCytometryAssayCollectionOptions | CreateWesternBlotAssayCollectionOptions): TemplateCollectionEnvelope;
31
33
  export type BioTemplateControlValues = Record<string, unknown>;
32
34
  export declare function bioTemplatePresetControlValuesToOptions(name: 'wellplate-screen', values: BioTemplateControlValues): CreateWellPlateScreenCollectionOptions;
33
35
  export declare function bioTemplatePresetControlValuesToOptions(name: 'qpcr-expression', values: BioTemplateControlValues): CreateQpcrExpressionCollectionOptions;
34
36
  export declare function bioTemplatePresetControlValuesToOptions(name: 'lcms-batch', values: BioTemplateControlValues): CreateLcmsBatchCollectionOptions;
37
+ export declare function bioTemplatePresetControlValuesToOptions(name: 'targeted-metabolomics', values: BioTemplateControlValues): CreateTargetedMetabolomicsCollectionOptions;
35
38
  export declare function bioTemplatePresetControlValuesToOptions(name: 'elisa-assay', values: BioTemplateControlValues): CreateElisaAssayCollectionOptions;
36
39
  export declare function bioTemplatePresetControlValuesToOptions(name: 'flow-cytometry-assay', values: BioTemplateControlValues): CreateFlowCytometryAssayCollectionOptions;
37
40
  export declare function bioTemplatePresetControlValuesToOptions(name: 'western-blot-assay', values: BioTemplateControlValues): CreateWesternBlotAssayCollectionOptions;
38
- export declare function bioTemplatePresetControlValuesToOptions(name: TemplatePresetId | string, values: BioTemplateControlValues): CreateWellPlateScreenCollectionOptions | CreateQpcrExpressionCollectionOptions | CreateLcmsBatchCollectionOptions | CreateElisaAssayCollectionOptions | CreateFlowCytometryAssayCollectionOptions | CreateWesternBlotAssayCollectionOptions;
41
+ export declare function bioTemplatePresetControlValuesToOptions(name: TemplatePresetId | string, values: BioTemplateControlValues): CreateWellPlateScreenCollectionOptions | CreateQpcrExpressionCollectionOptions | CreateLcmsBatchCollectionOptions | CreateTargetedMetabolomicsCollectionOptions | CreateElisaAssayCollectionOptions | CreateFlowCytometryAssayCollectionOptions | CreateWesternBlotAssayCollectionOptions;
39
42
  export declare function createBioTemplatePresetCollectionFromControls(name: 'wellplate-screen', values: BioTemplateControlValues): TemplateCollectionEnvelope;
40
43
  export declare function createBioTemplatePresetCollectionFromControls(name: 'qpcr-expression', values: BioTemplateControlValues): TemplateCollectionEnvelope;
41
44
  export declare function createBioTemplatePresetCollectionFromControls(name: 'lcms-batch', values: BioTemplateControlValues): TemplateCollectionEnvelope;
45
+ export declare function createBioTemplatePresetCollectionFromControls(name: 'targeted-metabolomics', values: BioTemplateControlValues): TemplateCollectionEnvelope;
42
46
  export declare function createBioTemplatePresetCollectionFromControls(name: 'elisa-assay', values: BioTemplateControlValues): TemplateCollectionEnvelope;
43
47
  export declare function createBioTemplatePresetCollectionFromControls(name: 'flow-cytometry-assay', values: BioTemplateControlValues): TemplateCollectionEnvelope;
44
48
  export declare function createBioTemplatePresetCollectionFromControls(name: 'western-blot-assay', values: BioTemplateControlValues): TemplateCollectionEnvelope;
@@ -1,4 +1,4 @@
1
- export { assertTemplateEnvelope, bioTemplatePresetControlValuesToOptions, createBioTemplatePackCollection, createBioTemplatePresetCollection, createBioTemplatePresetCollectionFromControls, createAssayMatrixTemplate, createCalibrationCurveTemplate, createDoseResponseTemplate, createElisaAssayCollection, createFlowCytometryAssayCollection, createWesternBlotAssayCollection, createFlowCytometryPanelTemplate, createInstrumentRunTemplate, createLcmsBatchCollection, createPlateMapTemplate, createProtocolStepsTemplate, createQpcrExpressionCollection, createQpcrPlateTemplate, createReagentListTemplate, createSampleSheetTemplate, createSamplePrepTemplate, createTemplateCollection, createDefaultBioTemplate, createTimeCourseTemplate, createTemplateEnvelope, createWellPlateScreenCollection, ensureTemplateFromCollection, ensureTemplateEnvelope, extractTemplateCollection, getTemplateData, TEMPLATE_COLLECTION_KEY, validateAssayMatrixData, validateCalibrationCurveData, validateDoseResponseData, validateFlowCytometryPanelData, validateInstrumentRunData, validatePlateMapData, validateProtocolStepsData, validateQpcrPlateData, validateReagentListData, validateSampleSheetData, validateSamplePrepData, validateTimeCourseData, } from './builders';
1
+ export { assertTemplateEnvelope, bioTemplatePresetControlValuesToOptions, createBioTemplatePackCollection, createBioTemplatePresetCollection, createBioTemplatePresetCollectionFromControls, createAssayMatrixTemplate, createCalibrationCurveTemplate, createDoseResponseTemplate, createElisaAssayCollection, createFlowCytometryAssayCollection, createWesternBlotAssayCollection, createFlowCytometryPanelTemplate, createInstrumentRunTemplate, createLcmsBatchCollection, createPlateMapTemplate, createProtocolStepsTemplate, createQpcrExpressionCollection, createQpcrPlateTemplate, createReagentListTemplate, createSampleSheetTemplate, createSamplePrepTemplate, createTargetedMetabolomicsCollection, createTemplateCollection, createDefaultBioTemplate, createTimeCourseTemplate, createTemplateEnvelope, createWellPlateScreenCollection, ensureTemplateFromCollection, ensureTemplateEnvelope, extractTemplateCollection, getTemplateData, TEMPLATE_COLLECTION_KEY, validateAssayMatrixData, validateCalibrationCurveData, validateDoseResponseData, validateFlowCytometryPanelData, validateInstrumentRunData, validatePlateMapData, validateProtocolStepsData, validateQpcrPlateData, validateReagentListData, validateSampleSheetData, validateSamplePrepData, validateTimeCourseData, } from './builders';
2
2
  export type { BioTemplateControlValues, } from './builders';
3
3
  export { bioTemplateCatalog, getBioTemplateInfo, listBioTemplateCatalog, searchBioTemplateCatalog, } from './catalog';
4
4
  export { bioTemplateControlsToFormSchema, bioTemplateControlsToSectionFormSchemas, bioTemplateControlsToSidebarPanels, createBioTemplateControlToolkit, getBioTemplateControlDefaults, getBioTemplateControlSchema, listBioTemplateControlSchemas, listBioTemplatePresetControlSchemas, requireBioTemplateControlSchema, } from './controlSchemas';
@@ -7,7 +7,7 @@ export type { BioTemplateComponentBindingsById, BioTemplateComponentPropsByCompo
7
7
  export { bioTemplatePresets, getBioTemplatePresetInfo, listBioTemplatePresets, searchBioTemplatePresets, } from './presets';
8
8
  export { bioTemplatePacks, getBioTemplatePackInfo, listBioTemplatePacks, searchBioTemplatePacks, } from './packs';
9
9
  export { toAssayMatrixColumns, toAssayMatrixDataFrame, toAssayMatrixRows, toAssayMatrixSampleOptions, toCalibrationCurveColumns, toCalibrationCurveDataFrame, toCalibrationCurveRows, toDoseConditions, toDoseLayoutState, toFlowPanelColumns, toFlowPanelDataFrame, toFlowPanelRows, toInstrumentRunColumns, toInstrumentRunDataFrame, toInstrumentRunRows, toInstrumentRunScheduleEvents, toInstrumentRunSteps, toPlateMapEditorState, toProtocolColumns, toProtocolDataFrame, toProtocolRows, toProtocolSteps, toQpcrColumns, toQpcrDataFrame, toQpcrRows, toQpcrWellPlateWells, toReagentColumns, toReagentDataFrame, toReagentListItems, toReagentRows, toSampleColumns, toSampleDataFrame, toSampleOptions, toSamplePrepColumns, toSamplePrepDataFrame, toSamplePrepRows, toSampleRows, toTemplateDataFrame, toTimeCourseColumns, toTimeCourseDataFrame, toTimeCourseRows, toTimeCourseSteps, toWellMapArray, toWellPlateWells, } from './adapters';
10
- export type { AssayFeature, AssayFeatureType, AssayMatrixColumnsAdapterResult, AssayMatrixDataFrameAdapterResult, AssayMatrixRowsAdapterResult, AssayMatrixSampleOptionsAdapterResult, AssayMatrixTemplate, AssayMatrixTemplateData, AssayMeasurement, AssaySample, BioTemplateEnvelope, CalibrationAcceptance, CalibrationAcceptanceInput, CalibrationCurveColumnsAdapterResult, CalibrationCurveDataFrameAdapterResult, CalibrationCurveRowsAdapterResult, CalibrationCurveTemplate, CalibrationCurveTemplateData, CalibrationModel, CalibrationPoint, CalibrationPointInput, CalibrationPointRole, CalibrationPointStatus, CompoundDoseSeries, ControlDefinition, ControlRole, CreateBioTemplatePackCollectionOptions, CreateAssayMatrixTemplateOptions, CreateCalibrationCurveTemplateOptions, CreateDoseResponseTemplateOptions, CreateElisaAssayCollectionOptions, CreateFlowCytometryAssayCollectionOptions, CreateWesternBlotAssayCollectionOptions, CreateFlowCytometryPanelTemplateOptions, CreateInstrumentRunTemplateOptions, CreateLcmsBatchCollectionOptions, CreatePlateMapTemplateOptions, CreateProtocolStepsTemplateOptions, CreateQpcrExpressionCollectionOptions, CreateQpcrPlateTemplateOptions, CreateReagentListTemplateOptions, CreateSampleSheetTemplateOptions, CreateSamplePrepTemplateOptions, CreateTimeCourseTemplateOptions, CreateWellPlateScreenCollectionOptions, DoseConditionsAdapterResult, DoseResponseTemplate, DoseResponseTemplateData, FlowControlKind, FlowCytometryPanelTemplate, FlowCytometryPanelTemplateData, FlowMarkerPurpose, FlowPanelColumnsAdapterResult, FlowPanelControl, FlowPanelDataFrameAdapterResult, FlowPanelMarker, FlowPanelRowsAdapterResult, InstrumentMethod, InstrumentMethodInput, InstrumentRunColumnsAdapterResult, InstrumentRunDataFrameAdapterResult, InstrumentRunItem, InstrumentRunItemInput, InstrumentRunItemKind, InstrumentRunRowsAdapterResult, InstrumentRunScheduleEventsAdapterResult, InstrumentRunStepsAdapterResult, InstrumentRunStatus, InstrumentRunTemplate, InstrumentRunTemplateData, DataFrameAdapterResult, DataFrameTemplate, PlateMapEditorAdapterResult, PlateMapTemplate, PlateMapTemplateData, ProtocolColumnsAdapterResult, ProtocolDataFrameAdapterResult, ProtocolRowsAdapterResult, ProtocolStepRecord, ProtocolStepsAdapterResult, ProtocolStepsTemplate, ProtocolStepsTemplateData, QpcrChemistry, QpcrColumnsAdapterResult, QpcrControlKind, QpcrDataFrameAdapterResult, QpcrPlateTemplate, QpcrPlateTemplateData, QpcrReaction, QpcrRowsAdapterResult, QpcrSample, QpcrTarget, QpcrWellMapAdapterResult, ReagentColumnsAdapterResult, ReagentDataFrameAdapterResult, ReagentKind, ReagentListItemsAdapterResult, ReagentListTemplate, ReagentListTemplateData, ReagentRecord, ReagentTemplateInput, ReagentRowsAdapterResult, SampleColumn, SampleColumnType, SampleColumnsAdapterResult, SampleDataFrameAdapterResult, SampleGroupDefinition, SampleOptionsAdapterResult, SamplePrepColumnsAdapterResult, SamplePrepDataFrameAdapterResult, SamplePrepRowsAdapterResult, SamplePrepStatus, SamplePrepStep, SamplePrepStepInput, SamplePrepStepType, SamplePrepTemplate, SamplePrepTemplateData, SampleRecord, SampleRowsAdapterResult, SampleSheetTemplate, SampleSheetTemplateData, TimeCourseColumnsAdapterResult, TimeCourseCondition, TimeCourseDataFrameAdapterResult, TimeCourseRowsAdapterResult, TimeCourseSample, TimeCourseStepsAdapterResult, TimeCourseTemplate, TimeCourseTemplateData, TimePoint, TimeUnit, TemplateId, TemplatePackId, TemplatePresetId, TemplateCollection, TemplateCollectionEnvelope, TemplateDataFrameAdapterResult, TemplateKind, TemplatePlateMap, TemplateSample, TemplateWell, WellMapAdapterResult, } from './types';
10
+ export type { AssayFeature, AssayFeatureType, AssayMatrixColumnsAdapterResult, AssayMatrixDataFrameAdapterResult, AssayMatrixRowsAdapterResult, AssayMatrixSampleOptionsAdapterResult, AssayMatrixTemplate, AssayMatrixTemplateData, AssayMeasurement, AssaySample, BioTemplateEnvelope, CalibrationAcceptance, CalibrationAcceptanceInput, CalibrationCurveColumnsAdapterResult, CalibrationCurveDataFrameAdapterResult, CalibrationCurveRowsAdapterResult, CalibrationCurveTemplate, CalibrationCurveTemplateData, CalibrationModel, CalibrationPoint, CalibrationPointInput, CalibrationPointRole, CalibrationPointStatus, CompoundDoseSeries, ControlDefinition, ControlRole, CreateBioTemplatePackCollectionOptions, CreateAssayMatrixTemplateOptions, CreateCalibrationCurveTemplateOptions, CreateDoseResponseTemplateOptions, CreateElisaAssayCollectionOptions, CreateFlowCytometryAssayCollectionOptions, CreateWesternBlotAssayCollectionOptions, CreateFlowCytometryPanelTemplateOptions, CreateInstrumentRunTemplateOptions, CreateLcmsBatchCollectionOptions, CreateTargetedMetabolomicsCollectionOptions, CreatePlateMapTemplateOptions, CreateProtocolStepsTemplateOptions, CreateQpcrExpressionCollectionOptions, CreateQpcrPlateTemplateOptions, CreateReagentListTemplateOptions, CreateSampleSheetTemplateOptions, CreateSamplePrepTemplateOptions, CreateTimeCourseTemplateOptions, CreateWellPlateScreenCollectionOptions, DoseConditionsAdapterResult, DoseResponseTemplate, DoseResponseTemplateData, FlowControlKind, FlowCytometryPanelTemplate, FlowCytometryPanelTemplateData, FlowMarkerPurpose, FlowPanelColumnsAdapterResult, FlowPanelControl, FlowPanelDataFrameAdapterResult, FlowPanelMarker, FlowPanelRowsAdapterResult, InstrumentMethod, InstrumentMethodInput, InstrumentRunColumnsAdapterResult, InstrumentRunDataFrameAdapterResult, InstrumentRunItem, InstrumentRunItemInput, InstrumentRunItemKind, InstrumentRunRowsAdapterResult, InstrumentRunScheduleEventsAdapterResult, InstrumentRunStepsAdapterResult, InstrumentRunStatus, InstrumentRunTemplate, InstrumentRunTemplateData, DataFrameAdapterResult, DataFrameTemplate, PlateMapEditorAdapterResult, PlateMapTemplate, PlateMapTemplateData, ProtocolColumnsAdapterResult, ProtocolDataFrameAdapterResult, ProtocolRowsAdapterResult, ProtocolStepRecord, ProtocolStepsAdapterResult, ProtocolStepsTemplate, ProtocolStepsTemplateData, QpcrChemistry, QpcrColumnsAdapterResult, QpcrControlKind, QpcrDataFrameAdapterResult, QpcrPlateTemplate, QpcrPlateTemplateData, QpcrReaction, QpcrRowsAdapterResult, QpcrSample, QpcrTarget, QpcrWellMapAdapterResult, ReagentColumnsAdapterResult, ReagentDataFrameAdapterResult, ReagentKind, ReagentListItemsAdapterResult, ReagentListTemplate, ReagentListTemplateData, ReagentRecord, ReagentTemplateInput, ReagentRowsAdapterResult, SampleColumn, SampleColumnType, SampleColumnsAdapterResult, SampleDataFrameAdapterResult, SampleGroupDefinition, SampleOptionsAdapterResult, SamplePrepColumnsAdapterResult, SamplePrepDataFrameAdapterResult, SamplePrepRowsAdapterResult, SamplePrepStatus, SamplePrepStep, SamplePrepStepInput, SamplePrepStepType, SamplePrepTemplate, SamplePrepTemplateData, SampleRecord, SampleRowsAdapterResult, SampleSheetTemplate, SampleSheetTemplateData, TimeCourseColumnsAdapterResult, TimeCourseCondition, TimeCourseDataFrameAdapterResult, TimeCourseRowsAdapterResult, TimeCourseSample, TimeCourseStepsAdapterResult, TimeCourseTemplate, TimeCourseTemplateData, TimePoint, TimeUnit, TemplateId, TemplatePackId, TemplatePresetId, TemplateCollection, TemplateCollectionEnvelope, TemplateDataFrameAdapterResult, TemplateKind, TemplatePlateMap, TemplateSample, TemplateWell, WellMapAdapterResult, } from './types';
11
11
  export type { BioTemplateCatalogEntry, } from './catalog';
12
12
  export type { BioTemplateComponentBinding, BioTemplateComponentImport, BioTemplateComponentPropsBinding, BioTemplateResolvedComponentBinding, BioTemplateComponentSnippet, BioTemplateComponentSnippetOptions, BioTemplateComponentTarget, BioTemplateComponentUsage, BioTemplateComponentUsageOptions, } from './componentBindings';
13
13
  export type { BioTemplateControlSchema, BioTemplateControlTarget, } from './controlSchemas';
@@ -1,2 +1,2 @@
1
- import { $ as toSampleOptions, $t as validateTimeCourseData, A as toFlowPanelColumns, At as createReagentListTemplate, B as toProtocolDataFrame, Bt as extractTemplateCollection, C as toAssayMatrixRows, Ct as createFlowCytometryPanelTemplate, D as toCalibrationCurveRows, Dt as createProtocolStepsTemplate, E as toCalibrationCurveDataFrame, Et as createPlateMapTemplate, F as toInstrumentRunRows, Ft as createTimeCourseTemplate, G as toQpcrRows, Gt as validateFlowCytometryPanelData, H as toProtocolSteps, Ht as validateAssayMatrixData, I as toInstrumentRunScheduleEvents, It as createWellPlateScreenCollection, J as toReagentDataFrame, Jt as validateProtocolStepsData, K as toQpcrWellPlateWells, Kt as validateInstrumentRunData, L as toInstrumentRunSteps, Lt as createWesternBlotAssayCollection, M as toFlowPanelRows, Mt as createSampleSheetTemplate, N as toInstrumentRunColumns, Nt as createTemplateCollection, O as toDoseConditions, Ot as createQpcrExpressionCollection, P as toInstrumentRunDataFrame, Pt as createTemplateEnvelope, Q as toSampleDataFrame, Qt as validateSampleSheetData, R as toPlateMapEditorState, Rt as ensureTemplateEnvelope, S as toAssayMatrixDataFrame, St as createFlowCytometryAssayCollection, T as toCalibrationCurveColumns, Tt as createLcmsBatchCollection, U as toQpcrColumns, Ut as validateCalibrationCurveData, V as toProtocolRows, Vt as getTemplateData, W as toQpcrDataFrame, Wt as validateDoseResponseData, X as toReagentRows, Xt as validateReagentListData, Y as toReagentListItems, Yt as validateQpcrPlateData, Z as toSampleColumns, Zt as validateSamplePrepData, _ as toBioTemplateComponentPropsByComponent, _t as createBioTemplatePresetCollectionFromControls, a as getBioTemplateControlDefaults, an as getBioTemplatePackInfo, at as toTimeCourseColumns, b as toBioTemplateComponentUsage, bt as createDoseResponseTemplate, c as listBioTemplatePresetControlSchemas, cn as bioTemplateCatalog, ct as toTimeCourseSteps, d as getBioTemplateComponentProps, dn as searchBioTemplateCatalog, dt as TEMPLATE_COLLECTION_KEY, en as bioTemplatePresets, et as toSamplePrepColumns, f as listBioTemplateComponentBindings, ft as assertTemplateEnvelope, g as toBioTemplateComponentProps, gt as createBioTemplatePresetCollection, h as toBioTemplateComponentImports, ht as createBioTemplatePackCollection, i as createBioTemplateControlToolkit, in as bioTemplatePacks, it as toTemplateDataFrame, j as toFlowPanelDataFrame, jt as createSamplePrepTemplate, k as toDoseLayoutState, kt as createQpcrPlateTemplate, l as requireBioTemplateControlSchema, ln as getBioTemplateInfo, lt as toWellMapArray, m as toBioTemplateComponentBindingsById, mt as createAssayMatrixTemplate, n as bioTemplateControlsToSectionFormSchemas, nn as listBioTemplatePresets, nt as toSamplePrepRows, o as getBioTemplateControlSchema, on as listBioTemplatePacks, ot as toTimeCourseDataFrame, p as toBioTemplateComponentBindings, pt as bioTemplatePresetControlValuesToOptions, q as toReagentColumns, qt as validatePlateMapData, r as bioTemplateControlsToSidebarPanels, rn as searchBioTemplatePresets, rt as toSampleRows, s as listBioTemplateControlSchemas, sn as searchBioTemplatePacks, st as toTimeCourseRows, t as bioTemplateControlsToFormSchema, tn as getBioTemplatePresetInfo, tt as toSamplePrepDataFrame, u as getBioTemplateComponentBindings, un as listBioTemplateCatalog, ut as toWellPlateWells, v as toBioTemplateComponentPropsById, vt as createCalibrationCurveTemplate, w as toAssayMatrixSampleOptions, wt as createInstrumentRunTemplate, x as toAssayMatrixColumns, xt as createElisaAssayCollection, y as toBioTemplateComponentSnippets, yt as createDefaultBioTemplate, z as toProtocolColumns, zt as ensureTemplateFromCollection } from "../templates-Cyt0Suwf.js";
2
- export { TEMPLATE_COLLECTION_KEY, assertTemplateEnvelope, bioTemplateCatalog, bioTemplateControlsToFormSchema, bioTemplateControlsToSectionFormSchemas, bioTemplateControlsToSidebarPanels, bioTemplatePacks, bioTemplatePresetControlValuesToOptions, bioTemplatePresets, createAssayMatrixTemplate, createBioTemplateControlToolkit, createBioTemplatePackCollection, createBioTemplatePresetCollection, createBioTemplatePresetCollectionFromControls, createCalibrationCurveTemplate, createDefaultBioTemplate, createDoseResponseTemplate, createElisaAssayCollection, createFlowCytometryAssayCollection, createFlowCytometryPanelTemplate, createInstrumentRunTemplate, createLcmsBatchCollection, createPlateMapTemplate, createProtocolStepsTemplate, createQpcrExpressionCollection, createQpcrPlateTemplate, createReagentListTemplate, createSamplePrepTemplate, createSampleSheetTemplate, createTemplateCollection, createTemplateEnvelope, createTimeCourseTemplate, createWellPlateScreenCollection, createWesternBlotAssayCollection, ensureTemplateEnvelope, ensureTemplateFromCollection, extractTemplateCollection, getBioTemplateComponentBindings, getBioTemplateComponentProps, getBioTemplateControlDefaults, getBioTemplateControlSchema, getBioTemplateInfo, getBioTemplatePackInfo, getBioTemplatePresetInfo, getTemplateData, listBioTemplateCatalog, listBioTemplateComponentBindings, listBioTemplateControlSchemas, listBioTemplatePacks, listBioTemplatePresetControlSchemas, listBioTemplatePresets, requireBioTemplateControlSchema, searchBioTemplateCatalog, searchBioTemplatePacks, searchBioTemplatePresets, toAssayMatrixColumns, toAssayMatrixDataFrame, toAssayMatrixRows, toAssayMatrixSampleOptions, toBioTemplateComponentBindings, toBioTemplateComponentBindingsById, toBioTemplateComponentImports, toBioTemplateComponentProps, toBioTemplateComponentPropsByComponent, toBioTemplateComponentPropsById, toBioTemplateComponentSnippets, toBioTemplateComponentUsage, toCalibrationCurveColumns, toCalibrationCurveDataFrame, toCalibrationCurveRows, toDoseConditions, toDoseLayoutState, toFlowPanelColumns, toFlowPanelDataFrame, toFlowPanelRows, toInstrumentRunColumns, toInstrumentRunDataFrame, toInstrumentRunRows, toInstrumentRunScheduleEvents, toInstrumentRunSteps, toPlateMapEditorState, toProtocolColumns, toProtocolDataFrame, toProtocolRows, toProtocolSteps, toQpcrColumns, toQpcrDataFrame, toQpcrRows, toQpcrWellPlateWells, toReagentColumns, toReagentDataFrame, toReagentListItems, toReagentRows, toSampleColumns, toSampleDataFrame, toSampleOptions, toSamplePrepColumns, toSamplePrepDataFrame, toSamplePrepRows, toSampleRows, toTemplateDataFrame, toTimeCourseColumns, toTimeCourseDataFrame, toTimeCourseRows, toTimeCourseSteps, toWellMapArray, toWellPlateWells, validateAssayMatrixData, validateCalibrationCurveData, validateDoseResponseData, validateFlowCytometryPanelData, validateInstrumentRunData, validatePlateMapData, validateProtocolStepsData, validateQpcrPlateData, validateReagentListData, validateSamplePrepData, validateSampleSheetData, validateTimeCourseData };
1
+ import { $ as toSampleOptions, $t as validateSampleSheetData, A as toFlowPanelColumns, At as createReagentListTemplate, B as toProtocolDataFrame, Bt as ensureTemplateFromCollection, C as toAssayMatrixRows, Ct as createFlowCytometryPanelTemplate, D as toCalibrationCurveRows, Dt as createProtocolStepsTemplate, E as toCalibrationCurveDataFrame, Et as createPlateMapTemplate, F as toInstrumentRunRows, Ft as createTemplateEnvelope, G as toQpcrRows, Gt as validateDoseResponseData, H as toProtocolSteps, Ht as getTemplateData, I as toInstrumentRunScheduleEvents, It as createTimeCourseTemplate, J as toReagentDataFrame, Jt as validatePlateMapData, K as toQpcrWellPlateWells, Kt as validateFlowCytometryPanelData, L as toInstrumentRunSteps, Lt as createWellPlateScreenCollection, M as toFlowPanelRows, Mt as createSampleSheetTemplate, N as toInstrumentRunColumns, Nt as createTargetedMetabolomicsCollection, O as toDoseConditions, Ot as createQpcrExpressionCollection, P as toInstrumentRunDataFrame, Pt as createTemplateCollection, Q as toSampleDataFrame, Qt as validateSamplePrepData, R as toPlateMapEditorState, Rt as createWesternBlotAssayCollection, S as toAssayMatrixDataFrame, St as createFlowCytometryAssayCollection, T as toCalibrationCurveColumns, Tt as createLcmsBatchCollection, U as toQpcrColumns, Ut as validateAssayMatrixData, V as toProtocolRows, Vt as extractTemplateCollection, W as toQpcrDataFrame, Wt as validateCalibrationCurveData, X as toReagentRows, Xt as validateQpcrPlateData, Y as toReagentListItems, Yt as validateProtocolStepsData, Z as toSampleColumns, Zt as validateReagentListData, _ as toBioTemplateComponentPropsByComponent, _t as createBioTemplatePresetCollectionFromControls, a as getBioTemplateControlDefaults, an as bioTemplatePacks, at as toTimeCourseColumns, b as toBioTemplateComponentUsage, bt as createDoseResponseTemplate, c as listBioTemplatePresetControlSchemas, cn as searchBioTemplatePacks, ct as toTimeCourseSteps, d as getBioTemplateComponentProps, dn as listBioTemplateCatalog, dt as TEMPLATE_COLLECTION_KEY, en as validateTimeCourseData, et as toSamplePrepColumns, f as listBioTemplateComponentBindings, fn as searchBioTemplateCatalog, ft as assertTemplateEnvelope, g as toBioTemplateComponentProps, gt as createBioTemplatePresetCollection, h as toBioTemplateComponentImports, ht as createBioTemplatePackCollection, i as createBioTemplateControlToolkit, in as searchBioTemplatePresets, it as toTemplateDataFrame, j as toFlowPanelDataFrame, jt as createSamplePrepTemplate, k as toDoseLayoutState, kt as createQpcrPlateTemplate, l as requireBioTemplateControlSchema, ln as bioTemplateCatalog, lt as toWellMapArray, m as toBioTemplateComponentBindingsById, mt as createAssayMatrixTemplate, n as bioTemplateControlsToSectionFormSchemas, nn as getBioTemplatePresetInfo, nt as toSamplePrepRows, o as getBioTemplateControlSchema, on as getBioTemplatePackInfo, ot as toTimeCourseDataFrame, p as toBioTemplateComponentBindings, pt as bioTemplatePresetControlValuesToOptions, q as toReagentColumns, qt as validateInstrumentRunData, r as bioTemplateControlsToSidebarPanels, rn as listBioTemplatePresets, rt as toSampleRows, s as listBioTemplateControlSchemas, sn as listBioTemplatePacks, st as toTimeCourseRows, t as bioTemplateControlsToFormSchema, tn as bioTemplatePresets, tt as toSamplePrepDataFrame, u as getBioTemplateComponentBindings, un as getBioTemplateInfo, ut as toWellPlateWells, v as toBioTemplateComponentPropsById, vt as createCalibrationCurveTemplate, w as toAssayMatrixSampleOptions, wt as createInstrumentRunTemplate, x as toAssayMatrixColumns, xt as createElisaAssayCollection, y as toBioTemplateComponentSnippets, yt as createDefaultBioTemplate, z as toProtocolColumns, zt as ensureTemplateEnvelope } from "../templates-BorLR_7p.js";
2
+ export { TEMPLATE_COLLECTION_KEY, assertTemplateEnvelope, bioTemplateCatalog, bioTemplateControlsToFormSchema, bioTemplateControlsToSectionFormSchemas, bioTemplateControlsToSidebarPanels, bioTemplatePacks, bioTemplatePresetControlValuesToOptions, bioTemplatePresets, createAssayMatrixTemplate, createBioTemplateControlToolkit, createBioTemplatePackCollection, createBioTemplatePresetCollection, createBioTemplatePresetCollectionFromControls, createCalibrationCurveTemplate, createDefaultBioTemplate, createDoseResponseTemplate, createElisaAssayCollection, createFlowCytometryAssayCollection, createFlowCytometryPanelTemplate, createInstrumentRunTemplate, createLcmsBatchCollection, createPlateMapTemplate, createProtocolStepsTemplate, createQpcrExpressionCollection, createQpcrPlateTemplate, createReagentListTemplate, createSamplePrepTemplate, createSampleSheetTemplate, createTargetedMetabolomicsCollection, createTemplateCollection, createTemplateEnvelope, createTimeCourseTemplate, createWellPlateScreenCollection, createWesternBlotAssayCollection, ensureTemplateEnvelope, ensureTemplateFromCollection, extractTemplateCollection, getBioTemplateComponentBindings, getBioTemplateComponentProps, getBioTemplateControlDefaults, getBioTemplateControlSchema, getBioTemplateInfo, getBioTemplatePackInfo, getBioTemplatePresetInfo, getTemplateData, listBioTemplateCatalog, listBioTemplateComponentBindings, listBioTemplateControlSchemas, listBioTemplatePacks, listBioTemplatePresetControlSchemas, listBioTemplatePresets, requireBioTemplateControlSchema, searchBioTemplateCatalog, searchBioTemplatePacks, searchBioTemplatePresets, toAssayMatrixColumns, toAssayMatrixDataFrame, toAssayMatrixRows, toAssayMatrixSampleOptions, toBioTemplateComponentBindings, toBioTemplateComponentBindingsById, toBioTemplateComponentImports, toBioTemplateComponentProps, toBioTemplateComponentPropsByComponent, toBioTemplateComponentPropsById, toBioTemplateComponentSnippets, toBioTemplateComponentUsage, toCalibrationCurveColumns, toCalibrationCurveDataFrame, toCalibrationCurveRows, toDoseConditions, toDoseLayoutState, toFlowPanelColumns, toFlowPanelDataFrame, toFlowPanelRows, toInstrumentRunColumns, toInstrumentRunDataFrame, toInstrumentRunRows, toInstrumentRunScheduleEvents, toInstrumentRunSteps, toPlateMapEditorState, toProtocolColumns, toProtocolDataFrame, toProtocolRows, toProtocolSteps, toQpcrColumns, toQpcrDataFrame, toQpcrRows, toQpcrWellPlateWells, toReagentColumns, toReagentDataFrame, toReagentListItems, toReagentRows, toSampleColumns, toSampleDataFrame, toSampleOptions, toSamplePrepColumns, toSamplePrepDataFrame, toSamplePrepRows, toSampleRows, toTemplateDataFrame, toTimeCourseColumns, toTimeCourseDataFrame, toTimeCourseRows, toTimeCourseSteps, toWellMapArray, toWellPlateWells, validateAssayMatrixData, validateCalibrationCurveData, validateDoseResponseData, validateFlowCytometryPanelData, validateInstrumentRunData, validatePlateMapData, validateProtocolStepsData, validateQpcrPlateData, validateReagentListData, validateSamplePrepData, validateSampleSheetData, validateTimeCourseData };
@@ -48,6 +48,18 @@ export declare const bioTemplatePresets: readonly [{
48
48
  readonly frontend_import: "import { createLcmsBatchCollection, toAssayMatrixSampleOptions, toInstrumentRunDataFrame, toInstrumentRunScheduleEvents, toInstrumentRunSteps, toTemplateDataFrame } from '@morscherlab/mint-sdk/templates'";
49
49
  readonly frontend_adapters: readonly ["toTemplateDataFrame", "toInstrumentRunDataFrame", "toInstrumentRunSteps", "toInstrumentRunScheduleEvents", "toAssayMatrixDataFrame", "toAssayMatrixSampleOptions"];
50
50
  readonly components: readonly ["DataFrame", "ExperimentTimeline", "ScheduleCalendar", "ChartContainer", "SampleSelector"];
51
+ }, {
52
+ readonly name: "targeted-metabolomics";
53
+ readonly label: "Targeted metabolomics";
54
+ readonly category: "bio-template-preset";
55
+ readonly purpose: "Sample metadata, extraction prep, internal standards, LC/GC-MS sequence, calibration curve, and metabolite readout matrix for quantitative metabolomics.";
56
+ readonly templates: readonly ["sample-sheet", "sample-prep", "reagent-list", "instrument-run", "calibration-curve", "assay-matrix"];
57
+ readonly aliases: readonly ["targeted metabolomics", "quantitative metabolomics", "lc-ms metabolomics", "gc-ms metabolomics", "targeted lcms", "metabolite quantitation", "mass spec quantitation", "internal standards", "peak area ratio"];
58
+ readonly python_import: "from mint_sdk.templates import create_targeted_metabolomics_collection, save_template_collection";
59
+ readonly python_example: "create_targeted_metabolomics_collection(samples=[\"S001\", \"S002\"], metabolites=[\"Glucose\", \"Lactate\"], internal_standards=[\"13C Glucose\"], instrument=\"LC-MS\")";
60
+ readonly frontend_import: "import { createTargetedMetabolomicsCollection, toInstrumentRunDataFrame, toCalibrationCurveDataFrame, toAssayMatrixDataFrame, toTemplateDataFrame } from '@morscherlab/mint-sdk/templates'";
61
+ readonly frontend_adapters: readonly ["toTemplateDataFrame", "toSamplePrepDataFrame", "toReagentDataFrame", "toInstrumentRunDataFrame", "toInstrumentRunSteps", "toInstrumentRunScheduleEvents", "toCalibrationCurveDataFrame", "toAssayMatrixDataFrame", "toAssayMatrixSampleOptions"];
62
+ readonly components: readonly ["DataFrame", "ReagentList", "ExperimentTimeline", "ScheduleCalendar", "FitPanel", "ChartContainer", "SampleSelector"];
51
63
  }, {
52
64
  readonly name: "elisa-assay";
53
65
  readonly label: "ELISA assay";
@@ -1,7 +1,7 @@
1
1
  import { DataFrameColumn, PlateCondition, PlateMap, PlateMapEditorState, ProtocolStep, Reagent, ScheduleEvent, SampleType, SelectOption, Well, WellPlateFormat } from '../types';
2
2
  export type TemplateKind = 'experiment-design';
3
3
  export type TemplateId = 'plate-map' | 'sample-sheet' | 'sample-prep' | 'dose-response' | 'calibration-curve' | 'time-course' | 'protocol-steps' | 'assay-matrix' | 'reagent-list' | 'flow-cytometry-panel' | 'instrument-run' | 'qpcr-plate';
4
- export type TemplatePresetId = 'wellplate-screen' | 'qpcr-expression' | 'lcms-batch' | 'elisa-assay' | 'flow-cytometry-assay' | 'western-blot-assay';
4
+ export type TemplatePresetId = 'wellplate-screen' | 'qpcr-expression' | 'lcms-batch' | 'targeted-metabolomics' | 'elisa-assay' | 'flow-cytometry-assay' | 'western-blot-assay';
5
5
  export type TemplatePackId = 'cell-culture-screen' | 'omics-assay' | 'longitudinal-study' | 'molecular-assay';
6
6
  export interface CreateBioTemplatePackCollectionOptions {
7
7
  metadata?: Record<string, unknown>;
@@ -461,6 +461,21 @@ export interface CreateLcmsBatchCollectionOptions {
461
461
  includeQc?: boolean;
462
462
  metadata?: Record<string, unknown>;
463
463
  }
464
+ export interface CreateTargetedMetabolomicsCollectionOptions {
465
+ samples?: Array<string | SampleRecord>;
466
+ metabolites?: Array<string | AssayFeature>;
467
+ internalStandards?: Array<string | ReagentTemplateInput>;
468
+ standardConcentrations?: number[];
469
+ concentrationUnit?: string;
470
+ responseUnit?: string;
471
+ calibrationAnalyte?: string;
472
+ instrument?: string;
473
+ method?: string | InstrumentMethodInput;
474
+ prepType?: SamplePrepStepType;
475
+ outputVolume?: number;
476
+ includeQc?: boolean;
477
+ metadata?: Record<string, unknown>;
478
+ }
464
479
  export interface CreateElisaAssayCollectionOptions {
465
480
  samples?: Array<string | SampleRecord>;
466
481
  analyte?: string;
@@ -1957,10 +1957,12 @@ var NumberInput_default = /* @__PURE__ */ defineComponent({
1957
1957
  const emit = __emit;
1958
1958
  const isSliderMode = computed(() => props.min !== void 0 && props.max !== void 0);
1959
1959
  const sliderPercent = computed(() => {
1960
- if (!isSliderMode.value || props.modelValue === void 0) return 0;
1961
- const range = props.max - props.min;
1960
+ const min = props.min;
1961
+ const max = props.max;
1962
+ if (min === void 0 || max === void 0 || props.modelValue === void 0) return 0;
1963
+ const range = max - min;
1962
1964
  if (range === 0) return 0;
1963
- return (props.modelValue - props.min) / range * 100;
1965
+ return (props.modelValue - min) / range * 100;
1964
1966
  });
1965
1967
  const canDecrement = computed(() => {
1966
1968
  if (props.modelValue === void 0) return true;
@@ -3855,8 +3857,9 @@ var UnitInput_default = /* @__PURE__ */ defineComponent({
3855
3857
  const groups = /* @__PURE__ */ new Map();
3856
3858
  const ungrouped = [];
3857
3859
  for (const u of props.units) if (u.group) {
3858
- if (!groups.has(u.group)) groups.set(u.group, []);
3859
- groups.get(u.group).push(u);
3860
+ const group = groups.get(u.group);
3861
+ if (group) group.push(u);
3862
+ else groups.set(u.group, [u]);
3860
3863
  } else ungrouped.push(u);
3861
3864
  return {
3862
3865
  groups,
@@ -4010,10 +4013,11 @@ var ConcentrationInput_default = /* @__PURE__ */ defineComponent({
4010
4013
  const emit = __emit;
4011
4014
  const { unitCategories, getConversionHint } = useConcentrationUnits();
4012
4015
  const filteredCategories = computed(() => {
4013
- if (!props.allowedUnits || props.allowedUnits.length === 0) return unitCategories.value;
4016
+ const allowedUnits = props.allowedUnits;
4017
+ if (!allowedUnits || allowedUnits.length === 0) return unitCategories.value;
4014
4018
  return unitCategories.value.map((cat) => ({
4015
4019
  label: cat.label,
4016
- units: cat.units.filter((u) => props.allowedUnits.includes(u))
4020
+ units: cat.units.filter((u) => allowedUnits.includes(u))
4017
4021
  })).filter((cat) => cat.units.length > 0);
4018
4022
  });
4019
4023
  const availableUnits = computed(() => {
@@ -4500,7 +4504,12 @@ function controlsToSettingsSchema(controls, options = {}) {
4500
4504
  icon: typeof config.icon === "string" ? config.icon : void 0,
4501
4505
  fields: sectionControls.map(controlToFormField),
4502
4506
  columns: config.columns ?? options.columns ?? 1,
4503
- condition: config.condition
4507
+ condition: config.condition,
4508
+ access: config.access,
4509
+ visibleFor: config.visibleFor,
4510
+ requiresAdmin: config.requiresAdmin,
4511
+ permissions: config.permissions,
4512
+ anyPermissions: config.anyPermissions
4504
4513
  };
4505
4514
  }) };
4506
4515
  }
@@ -4792,6 +4801,11 @@ function controlToFormField(control) {
4792
4801
  readonly: definition.readonly,
4793
4802
  validation: validationForControl(definition),
4794
4803
  condition: definition.condition,
4804
+ access: definition.access,
4805
+ visibleFor: definition.visibleFor,
4806
+ requiresAdmin: definition.requiresAdmin,
4807
+ permissions: definition.permissions,
4808
+ anyPermissions: definition.anyPermissions,
4795
4809
  colSpan: definition.colSpan,
4796
4810
  props
4797
4811
  };
@@ -5591,6 +5605,54 @@ var bioTemplatePresets = [
5591
5605
  "SampleSelector"
5592
5606
  ]
5593
5607
  },
5608
+ {
5609
+ name: "targeted-metabolomics",
5610
+ label: "Targeted metabolomics",
5611
+ category: "bio-template-preset",
5612
+ purpose: "Sample metadata, extraction prep, internal standards, LC/GC-MS sequence, calibration curve, and metabolite readout matrix for quantitative metabolomics.",
5613
+ templates: [
5614
+ "sample-sheet",
5615
+ "sample-prep",
5616
+ "reagent-list",
5617
+ "instrument-run",
5618
+ "calibration-curve",
5619
+ "assay-matrix"
5620
+ ],
5621
+ aliases: [
5622
+ "targeted metabolomics",
5623
+ "quantitative metabolomics",
5624
+ "lc-ms metabolomics",
5625
+ "gc-ms metabolomics",
5626
+ "targeted lcms",
5627
+ "metabolite quantitation",
5628
+ "mass spec quantitation",
5629
+ "internal standards",
5630
+ "peak area ratio"
5631
+ ],
5632
+ python_import: "from mint_sdk.templates import create_targeted_metabolomics_collection, save_template_collection",
5633
+ python_example: "create_targeted_metabolomics_collection(samples=[\"S001\", \"S002\"], metabolites=[\"Glucose\", \"Lactate\"], internal_standards=[\"13C Glucose\"], instrument=\"LC-MS\")",
5634
+ frontend_import: "import { createTargetedMetabolomicsCollection, toInstrumentRunDataFrame, toCalibrationCurveDataFrame, toAssayMatrixDataFrame, toTemplateDataFrame } from '@morscherlab/mint-sdk/templates'",
5635
+ frontend_adapters: [
5636
+ "toTemplateDataFrame",
5637
+ "toSamplePrepDataFrame",
5638
+ "toReagentDataFrame",
5639
+ "toInstrumentRunDataFrame",
5640
+ "toInstrumentRunSteps",
5641
+ "toInstrumentRunScheduleEvents",
5642
+ "toCalibrationCurveDataFrame",
5643
+ "toAssayMatrixDataFrame",
5644
+ "toAssayMatrixSampleOptions"
5645
+ ],
5646
+ components: [
5647
+ "DataFrame",
5648
+ "ReagentList",
5649
+ "ExperimentTimeline",
5650
+ "ScheduleCalendar",
5651
+ "FitPanel",
5652
+ "ChartContainer",
5653
+ "SampleSelector"
5654
+ ]
5655
+ },
5594
5656
  {
5595
5657
  name: "elisa-assay",
5596
5658
  label: "ELISA assay",
@@ -6396,6 +6458,72 @@ function createLcmsBatchCollection(options = {}) {
6396
6458
  ...options.metadata ?? {}
6397
6459
  });
6398
6460
  }
6461
+ function createTargetedMetabolomicsCollection(options = {}) {
6462
+ const sampleRecords = presetSampleRecords(options.samples ?? ["S001", "S002"]);
6463
+ const responseUnit = options.responseUnit ?? "peak area ratio";
6464
+ const concentrationUnit = options.concentrationUnit ?? "uM";
6465
+ const metaboliteFeatures = normalizeMetaboliteFeatures(options.metabolites ?? [
6466
+ "Glucose",
6467
+ "Lactate",
6468
+ "Pyruvate"
6469
+ ], responseUnit);
6470
+ const sampleSheet = createSampleSheetTemplate({ samples: sampleRecords });
6471
+ const samplePrep = createSamplePrepTemplate({
6472
+ samples: sampleRecords.map((sample) => sample.sampleId),
6473
+ prepType: options.prepType ?? "extraction",
6474
+ protocolName: "Metabolomics sample preparation",
6475
+ outputVolume: options.outputVolume ?? 50,
6476
+ metadata: { assay: "targeted-metabolomics" }
6477
+ });
6478
+ const reagents = createReagentListTemplate({
6479
+ reagents: normalizeInternalStandardReagents(options.internalStandards ?? ["Stable isotope internal standard mix"]),
6480
+ metadata: { assay: "targeted-metabolomics" }
6481
+ });
6482
+ const calibrationCurve = createCalibrationCurveTemplate({
6483
+ concentrations: options.standardConcentrations ?? [
6484
+ .1,
6485
+ 1,
6486
+ 10,
6487
+ 100
6488
+ ],
6489
+ analyte: options.calibrationAnalyte ?? firstFeatureName(metaboliteFeatures, "Metabolite panel"),
6490
+ unit: concentrationUnit,
6491
+ responseUnit,
6492
+ model: "linear-weighted-1-x",
6493
+ includeQc: options.includeQc,
6494
+ metadata: { assay: "targeted-metabolomics" }
6495
+ });
6496
+ return createTemplateCollection([
6497
+ sampleSheet,
6498
+ samplePrep,
6499
+ reagents,
6500
+ createInstrumentRunTemplate({
6501
+ items: targetedMetabolomicsRunItems(sampleRecords, calibrationCurve.data.points, options.includeQc !== false),
6502
+ method: options.method ?? "Targeted metabolomics",
6503
+ instrument: options.instrument ?? "LC-MS",
6504
+ includeBlanks: false,
6505
+ includeQc: false,
6506
+ metadata: { assay: "targeted-metabolomics" }
6507
+ }),
6508
+ calibrationCurve,
6509
+ createAssayMatrixTemplate({
6510
+ samples: sampleRecords.map((sample) => ({
6511
+ sampleId: sample.sampleId,
6512
+ name: sample.name,
6513
+ group: sample.group,
6514
+ metadata: sample.metadata ?? {}
6515
+ })),
6516
+ features: metaboliteFeatures,
6517
+ metadata: {
6518
+ assay: "targeted-metabolomics",
6519
+ responseUnit
6520
+ }
6521
+ })
6522
+ ], {
6523
+ preset: "targeted-metabolomics",
6524
+ ...options.metadata ?? {}
6525
+ });
6526
+ }
6399
6527
  function createElisaAssayCollection(options = {}) {
6400
6528
  const sampleRecords = presetSampleRecords(options.samples ?? ["Control", "Treatment"]);
6401
6529
  const analyte = options.analyte ?? "Analyte";
@@ -6625,6 +6753,7 @@ function createBioTemplatePresetCollection(name, options = {}) {
6625
6753
  if (preset.name === "wellplate-screen") return createWellPlateScreenCollection(options);
6626
6754
  if (preset.name === "qpcr-expression") return createQpcrExpressionCollection(options);
6627
6755
  if (preset.name === "lcms-batch") return createLcmsBatchCollection(options);
6756
+ if (preset.name === "targeted-metabolomics") return createTargetedMetabolomicsCollection(options);
6628
6757
  if (preset.name === "elisa-assay") return createElisaAssayCollection(options);
6629
6758
  if (preset.name === "flow-cytometry-assay") return createFlowCytometryAssayCollection(options);
6630
6759
  if (preset.name === "western-blot-assay") return createWesternBlotAssayCollection(options);
@@ -6656,6 +6785,29 @@ function bioTemplatePresetControlValuesToOptions(name, values) {
6656
6785
  method: readString(values.method, "Default method"),
6657
6786
  includeQc: readBoolean(values.includeQc, true)
6658
6787
  };
6788
+ if (preset.name === "targeted-metabolomics") return {
6789
+ samples: readStringList(values.sampleNames, ["S001", "S002"]),
6790
+ metabolites: readStringList(values.metaboliteNames, [
6791
+ "Glucose",
6792
+ "Lactate",
6793
+ "Pyruvate"
6794
+ ]),
6795
+ internalStandards: readStringList(values.internalStandards, ["Stable isotope internal standard mix"]),
6796
+ standardConcentrations: readNumberList(values.standardConcentrations, [
6797
+ .1,
6798
+ 1,
6799
+ 10,
6800
+ 100
6801
+ ]),
6802
+ concentrationUnit: readString(values.concentrationUnit, "uM"),
6803
+ responseUnit: readString(values.responseUnit, "peak area ratio"),
6804
+ calibrationAnalyte: readOptionalString(values.calibrationAnalyte),
6805
+ instrument: readString(values.instrument, "LC-MS"),
6806
+ method: readString(values.method, "Targeted metabolomics"),
6807
+ prepType: readString(values.prepType, "extraction"),
6808
+ outputVolume: readNumber(values.outputVolume, 50),
6809
+ includeQc: readBoolean(values.includeQc, true)
6810
+ };
6659
6811
  if (preset.name === "elisa-assay") return {
6660
6812
  samples: readStringList(values.sampleNames, ["Control", "Treatment"]),
6661
6813
  analyte: readString(values.analyte, "Analyte"),
@@ -7034,6 +7186,71 @@ function normalizeReagent(reagent) {
7034
7186
  metadata: reagent.metadata ?? {}
7035
7187
  };
7036
7188
  }
7189
+ function normalizeMetaboliteFeatures(metabolites, responseUnit) {
7190
+ return metabolites.map((metabolite, index) => {
7191
+ if (typeof metabolite === "string") return {
7192
+ id: idFromName(metabolite, `metabolite-${index + 1}`),
7193
+ name: metabolite,
7194
+ type: "metabolite",
7195
+ unit: responseUnit,
7196
+ metadata: { quantitation: "targeted" }
7197
+ };
7198
+ const feature = normalizeAssayFeature(metabolite);
7199
+ return {
7200
+ ...feature,
7201
+ type: feature.type ?? "metabolite",
7202
+ unit: feature.unit ?? responseUnit,
7203
+ metadata: {
7204
+ quantitation: "targeted",
7205
+ ...feature.metadata
7206
+ }
7207
+ };
7208
+ });
7209
+ }
7210
+ function normalizeInternalStandardReagents(internalStandards) {
7211
+ return internalStandards.map((standard, index) => {
7212
+ if (typeof standard === "string") return {
7213
+ id: idFromName(standard, `internal-standard-${index + 1}`),
7214
+ name: standard,
7215
+ kind: "compound",
7216
+ metadata: { role: "internal-standard" }
7217
+ };
7218
+ const reagent = normalizeReagent(standard);
7219
+ return {
7220
+ ...reagent,
7221
+ kind: standard.kind ?? "compound",
7222
+ metadata: {
7223
+ role: "internal-standard",
7224
+ ...reagent.metadata
7225
+ }
7226
+ };
7227
+ });
7228
+ }
7229
+ function targetedMetabolomicsRunItems(samples, calibrationPoints, includeQc) {
7230
+ const calibrationItems = calibrationPoints.filter((point) => point.role !== "qc" || includeQc).filter((point) => point.role === "blank" || point.role === "standard" || point.role === "qc").map((point) => ({
7231
+ id: `${point.id}-run`,
7232
+ kind: calibrationRunItemKind(point.role),
7233
+ name: point.level,
7234
+ metadata: {
7235
+ concentration: point.concentration,
7236
+ unit: point.unit,
7237
+ role: point.role
7238
+ }
7239
+ }));
7240
+ const sampleItems = samples.map((sample) => ({
7241
+ sampleId: sample.sampleId,
7242
+ name: sample.name ?? sample.sampleId,
7243
+ kind: "sample"
7244
+ }));
7245
+ return [...calibrationItems, ...sampleItems];
7246
+ }
7247
+ function calibrationRunItemKind(role) {
7248
+ if (role === "blank" || role === "standard" || role === "qc") return role;
7249
+ return "standard";
7250
+ }
7251
+ function firstFeatureName(features, fallback) {
7252
+ return features.find((feature) => feature.name)?.name ?? fallback;
7253
+ }
7037
7254
  function normalizeDateString(value) {
7038
7255
  if (value === void 0 || value === null) return void 0;
7039
7256
  return value instanceof Date ? value.toISOString() : value;
@@ -7208,6 +7425,10 @@ function readInteger(value, fallback) {
7208
7425
  const parsed = typeof value === "number" ? value : typeof value === "string" ? Number(value) : NaN;
7209
7426
  return Number.isFinite(parsed) ? Math.max(1, Math.round(parsed)) : fallback;
7210
7427
  }
7428
+ function readNumber(value, fallback) {
7429
+ const parsed = typeof value === "number" ? value : typeof value === "string" ? Number(value) : NaN;
7430
+ return Number.isFinite(parsed) ? parsed : fallback;
7431
+ }
7211
7432
  function readBoolean(value, fallback) {
7212
7433
  return typeof value === "boolean" ? value : fallback;
7213
7434
  }
@@ -9261,6 +9482,99 @@ var presetControlSchemas = {
9261
9482
  ...templateControlSchemas["instrument-run"],
9262
9483
  ...templateControlSchemas["assay-matrix"]
9263
9484
  },
9485
+ "targeted-metabolomics": {
9486
+ sampleNames: {
9487
+ type: "tags",
9488
+ label: "Samples",
9489
+ default: ["S001", "S002"],
9490
+ section: "samples",
9491
+ sectionLabel: "Samples",
9492
+ sectionSubtitle: "Unknowns and QC pool",
9493
+ view: "run",
9494
+ sidebar: {
9495
+ icon: ICONS.samples,
9496
+ iconColor: "#10b981",
9497
+ iconBg: "#d1fae5"
9498
+ }
9499
+ },
9500
+ metaboliteNames: {
9501
+ type: "tags",
9502
+ label: "Metabolites",
9503
+ default: [
9504
+ "Glucose",
9505
+ "Lactate",
9506
+ "Pyruvate"
9507
+ ],
9508
+ section: "features",
9509
+ sectionLabel: "Metabolites",
9510
+ sectionSubtitle: "Quantitation panel",
9511
+ view: "analysis",
9512
+ sidebar: {
9513
+ icon: ICONS.table,
9514
+ iconColor: "#0ea5e9",
9515
+ iconBg: "#e0f2fe"
9516
+ }
9517
+ },
9518
+ internalStandards: {
9519
+ type: "tags",
9520
+ label: "Internal standards",
9521
+ default: ["Stable isotope internal standard mix"],
9522
+ section: "standards",
9523
+ sectionLabel: "Standards",
9524
+ sectionSubtitle: "Calibration and internal standards",
9525
+ view: "analysis",
9526
+ sidebar: {
9527
+ icon: ICONS.dose,
9528
+ iconColor: "#8b5cf6",
9529
+ iconBg: "#ede9fe"
9530
+ }
9531
+ },
9532
+ standardConcentrations: {
9533
+ type: "tags",
9534
+ label: "Calibration levels",
9535
+ default: [
9536
+ "0.1",
9537
+ "1",
9538
+ "10",
9539
+ "100"
9540
+ ],
9541
+ section: "standards",
9542
+ view: "analysis"
9543
+ },
9544
+ concentrationUnit: {
9545
+ label: "Concentration unit",
9546
+ default: "uM",
9547
+ options: CONCENTRATION_UNITS,
9548
+ section: "standards",
9549
+ view: "analysis"
9550
+ },
9551
+ responseUnit: {
9552
+ label: "Response unit",
9553
+ default: "peak area ratio",
9554
+ section: "readout",
9555
+ sectionLabel: "Readout",
9556
+ view: "analysis",
9557
+ sidebar: {
9558
+ icon: ICONS.table,
9559
+ iconColor: "#0ea5e9",
9560
+ iconBg: "#e0f2fe"
9561
+ }
9562
+ },
9563
+ instrument: {
9564
+ ...templateControlSchemas["instrument-run"].instrument,
9565
+ default: "LC-MS"
9566
+ },
9567
+ method: {
9568
+ ...templateControlSchemas["instrument-run"].method,
9569
+ default: "Targeted metabolomics"
9570
+ },
9571
+ prepType: {
9572
+ ...templateControlSchemas["sample-prep"].prepType,
9573
+ default: "extraction"
9574
+ },
9575
+ outputVolume: templateControlSchemas["sample-prep"].outputVolume,
9576
+ includeQc: templateControlSchemas["instrument-run"].includeQc
9577
+ },
9264
9578
  "elisa-assay": {
9265
9579
  sampleNames: {
9266
9580
  type: "tags",
@@ -9577,6 +9891,6 @@ function capitalize(value) {
9577
9891
  return value.charAt(0).toUpperCase() + value.slice(1);
9578
9892
  }
9579
9893
  //#endregion
9580
- export { toSampleOptions as $, compareTime as $n, validateTimeCourseData as $t, toFlowPanelColumns as A, defineWellPlateDoseControlProps as An, createReagentListTemplate as At, toProtocolDataFrame as B, useConcentrationUnits as Bn, extractTemplateCollection as Bt, toAssayMatrixRows as C, defineControlComponentBindings as Cn, BaseCheckbox_default as Cr, createFlowCytometryPanelTemplate as Ct, toCalibrationCurveRows as D, defineDoseDesignControlModel as Dn, BaseInput_default as Dr, createProtocolStepsTemplate as Dt, toCalibrationCurveDataFrame as E, defineDoseCalculatorControlProps as En, BaseTextarea_default as Er, createPlateMapTemplate as Et, toInstrumentRunRows as F, useControlWorkspace as Fn, createTimeCourseTemplate as Ft, toQpcrRows as G, ATOMIC_WEIGHTS as Gn, validateFlowCytometryPanelData as Gt, toProtocolSteps as H, SequenceInput_default as Hn, validateAssayMatrixData as Ht, toInstrumentRunScheduleEvents as I, getFieldRegistryEntry as In, createWellPlateScreenCollection as It, toReagentDataFrame as J, FileUploader_default as Jn, validateProtocolStepsData as Jt, toQpcrWellPlateWells as K, useChemicalFormula as Kn, validateInstrumentRunData as Kt, toInstrumentRunSteps as L, getTypeDefault as Ln, createWesternBlotAssayCollection as Lt, toFlowPanelRows as M, getDefaultControlView as Mn, createSampleSheetTemplate as Mt, toInstrumentRunColumns as N, mergeControlWorkspaceOptions as Nn, createTemplateCollection as Nt, toDoseConditions as O, defineWellPlateControlProps as On, createQpcrExpressionCollection as Ot, toInstrumentRunDataFrame as P, useControlSchema as Pn, createTemplateEnvelope as Pt, toSampleDataFrame as Q, addMinutes$1 as Qn, validateSampleSheetData as Qt, toPlateMapEditorState as R, ConcentrationInput_default as Rn, ensureTemplateEnvelope as Rt, toAssayMatrixDataFrame as S, controlsToViewItems as Sn, BaseToggle_default as Sr, createFlowCytometryAssayCollection as St, toCalibrationCurveColumns as T, defineControls as Tn, normalizeOptionInput as Tr, createLcmsBatchCollection as Tt, toQpcrColumns as U, useSequenceUtils as Un, validateCalibrationCurveData as Ut, toProtocolRows as V, MoleculeInput_default as Vn, getTemplateData as Vt, toQpcrDataFrame as W, FormulaInput_default as Wn, validateDoseResponseData as Wt, toReagentRows as X, TagsInput_default as Xn, validateReagentListData as Xt, toReagentListItems as Y, NumberInput_default as Yn, validateQpcrPlateData as Yt, toSampleColumns as Z, TimePicker_default as Zn, validateSamplePrepData as Zt, toBioTemplateComponentPropsByComponent as _, controlsToSectionFormSchemas as _n, useListSelection as _r, createBioTemplatePresetCollectionFromControls as _t, getBioTemplateControlDefaults as a, getBioTemplatePackInfo as an, formatTimeSlot as ar, toTimeCourseColumns as at, toBioTemplateComponentUsage as b, controlsToTopBarSettingsConfig as bn, BaseSlider_default as br, createDoseResponseTemplate as bt, listBioTemplatePresetControlSchemas as c, bioTemplateCatalog as cn, isTimeInRange as cr, toTimeCourseSteps as ct, getBioTemplateComponentProps as d, searchBioTemplateCatalog as dn, snapToSlot as dr, TEMPLATE_COLLECTION_KEY as dt, bioTemplatePresets as en, durationMinutes as er, toSamplePrepColumns as et, listBioTemplateComponentBindings as f, controlValuesToComponentBindings as fn, toMinutes as fr, assertTemplateEnvelope as ft, toBioTemplateComponentProps as g, controlsToSectionFormSchema as gn, MultiSelect_default as gr, createBioTemplatePresetCollection as gt, toBioTemplateComponentImports as h, controlsToFormSchema as hn, useDropdownState as hr, createBioTemplatePackCollection as ht, createBioTemplateControlToolkit as i, bioTemplatePacks as in, formatTime as ir, toTemplateDataFrame as it, toFlowPanelDataFrame as j, getControlDefaults as jn, createSamplePrepTemplate as jt, toDoseLayoutState as k, defineWellPlateDoseComponentBindings as kn, createQpcrPlateTemplate as kt, requireBioTemplateControlSchema as l, getBioTemplateInfo as ln, parseTime as lr, toWellMapArray as lt, toBioTemplateComponentBindingsById as m, controlValuesToComponentProps as mn, DatePicker_default as mr, createAssayMatrixTemplate as mt, bioTemplateControlsToSectionFormSchemas as n, listBioTemplatePresets as nn, findNearestTimeSlotIndex as nr, toSamplePrepRows as nt, getBioTemplateControlSchema as o, listBioTemplatePacks as on, fromMinutes as or, toTimeCourseDataFrame as ot, toBioTemplateComponentBindings as p, controlValuesToComponentBindingsById as pn, useTimeUtils as pr, bioTemplatePresetControlValuesToOptions as pt, toReagentColumns as q, DateTimePicker_default as qn, validatePlateMapData as qt, bioTemplateControlsToSidebarPanels as r, searchBioTemplatePresets as rn, formatDuration as rr, toSampleRows as rt, listBioTemplateControlSchemas as s, searchBioTemplatePacks as sn, generateTimeSlots as sr, toTimeCourseRows as st, bioTemplateControlsToFormSchema as t, getBioTemplatePresetInfo as tn, findAvailableSlots as tr, toSamplePrepDataFrame as tt, getBioTemplateComponentBindings as u, listBioTemplateCatalog as un, rangesOverlap as ur, toWellPlateWells as ut, toBioTemplateComponentPropsById as v, controlsToSettingsSchema as vn, useSelectionLimit as vr, createCalibrationCurveTemplate as vt, toAssayMatrixSampleOptions as w, defineControlModel as wn, BaseSelect_default as wr, createInstrumentRunTemplate as wt, toAssayMatrixColumns as x, controlsToViewIds as xn, BaseRadioGroup_default as xr, createElisaAssayCollection as xt, toBioTemplateComponentSnippets as y, controlsToSidebarPanels as yn, useEventListener as yr, createDefaultBioTemplate as yt, toProtocolColumns as z, UnitInput_default as zn, ensureTemplateFromCollection as zt };
9894
+ export { toSampleOptions as $, addMinutes$1 as $n, validateSampleSheetData as $t, toFlowPanelColumns as A, defineWellPlateDoseComponentBindings as An, createReagentListTemplate as At, toProtocolDataFrame as B, UnitInput_default as Bn, ensureTemplateFromCollection as Bt, toAssayMatrixRows as C, controlsToViewItems as Cn, BaseToggle_default as Cr, createFlowCytometryPanelTemplate as Ct, toCalibrationCurveRows as D, defineDoseCalculatorControlProps as Dn, BaseTextarea_default as Dr, createProtocolStepsTemplate as Dt, toCalibrationCurveDataFrame as E, defineControls as En, normalizeOptionInput as Er, createPlateMapTemplate as Et, toInstrumentRunRows as F, useControlSchema as Fn, createTemplateEnvelope as Ft, toQpcrRows as G, FormulaInput_default as Gn, validateDoseResponseData as Gt, toProtocolSteps as H, MoleculeInput_default as Hn, getTemplateData as Ht, toInstrumentRunScheduleEvents as I, useControlWorkspace as In, createTimeCourseTemplate as It, toReagentDataFrame as J, DateTimePicker_default as Jn, validatePlateMapData as Jt, toQpcrWellPlateWells as K, ATOMIC_WEIGHTS as Kn, validateFlowCytometryPanelData as Kt, toInstrumentRunSteps as L, getFieldRegistryEntry as Ln, createWellPlateScreenCollection as Lt, toFlowPanelRows as M, getControlDefaults as Mn, createSampleSheetTemplate as Mt, toInstrumentRunColumns as N, getDefaultControlView as Nn, createTargetedMetabolomicsCollection as Nt, toDoseConditions as O, defineDoseDesignControlModel as On, BaseInput_default as Or, createQpcrExpressionCollection as Ot, toInstrumentRunDataFrame as P, mergeControlWorkspaceOptions as Pn, createTemplateCollection as Pt, toSampleDataFrame as Q, TimePicker_default as Qn, validateSamplePrepData as Qt, toPlateMapEditorState as R, getTypeDefault as Rn, createWesternBlotAssayCollection as Rt, toAssayMatrixDataFrame as S, controlsToViewIds as Sn, BaseRadioGroup_default as Sr, createFlowCytometryAssayCollection as St, toCalibrationCurveColumns as T, defineControlModel as Tn, BaseSelect_default as Tr, createLcmsBatchCollection as Tt, toQpcrColumns as U, SequenceInput_default as Un, validateAssayMatrixData as Ut, toProtocolRows as V, useConcentrationUnits as Vn, extractTemplateCollection as Vt, toQpcrDataFrame as W, useSequenceUtils as Wn, validateCalibrationCurveData as Wt, toReagentRows as X, NumberInput_default as Xn, validateQpcrPlateData as Xt, toReagentListItems as Y, FileUploader_default as Yn, validateProtocolStepsData as Yt, toSampleColumns as Z, TagsInput_default as Zn, validateReagentListData as Zt, toBioTemplateComponentPropsByComponent as _, controlsToSectionFormSchema as _n, MultiSelect_default as _r, createBioTemplatePresetCollectionFromControls as _t, getBioTemplateControlDefaults as a, bioTemplatePacks as an, formatTime as ar, toTimeCourseColumns as at, toBioTemplateComponentUsage as b, controlsToSidebarPanels as bn, useEventListener as br, createDoseResponseTemplate as bt, listBioTemplatePresetControlSchemas as c, searchBioTemplatePacks as cn, generateTimeSlots as cr, toTimeCourseSteps as ct, getBioTemplateComponentProps as d, listBioTemplateCatalog as dn, rangesOverlap as dr, TEMPLATE_COLLECTION_KEY as dt, validateTimeCourseData as en, compareTime as er, toSamplePrepColumns as et, listBioTemplateComponentBindings as f, searchBioTemplateCatalog as fn, snapToSlot as fr, assertTemplateEnvelope as ft, toBioTemplateComponentProps as g, controlsToFormSchema as gn, useDropdownState as gr, createBioTemplatePresetCollection as gt, toBioTemplateComponentImports as h, controlValuesToComponentProps as hn, DatePicker_default as hr, createBioTemplatePackCollection as ht, createBioTemplateControlToolkit as i, searchBioTemplatePresets as in, formatDuration as ir, toTemplateDataFrame as it, toFlowPanelDataFrame as j, defineWellPlateDoseControlProps as jn, createSamplePrepTemplate as jt, toDoseLayoutState as k, defineWellPlateControlProps as kn, createQpcrPlateTemplate as kt, requireBioTemplateControlSchema as l, bioTemplateCatalog as ln, isTimeInRange as lr, toWellMapArray as lt, toBioTemplateComponentBindingsById as m, controlValuesToComponentBindingsById as mn, useTimeUtils as mr, createAssayMatrixTemplate as mt, bioTemplateControlsToSectionFormSchemas as n, getBioTemplatePresetInfo as nn, findAvailableSlots as nr, toSamplePrepRows as nt, getBioTemplateControlSchema as o, getBioTemplatePackInfo as on, formatTimeSlot as or, toTimeCourseDataFrame as ot, toBioTemplateComponentBindings as p, controlValuesToComponentBindings as pn, toMinutes as pr, bioTemplatePresetControlValuesToOptions as pt, toReagentColumns as q, useChemicalFormula as qn, validateInstrumentRunData as qt, bioTemplateControlsToSidebarPanels as r, listBioTemplatePresets as rn, findNearestTimeSlotIndex as rr, toSampleRows as rt, listBioTemplateControlSchemas as s, listBioTemplatePacks as sn, fromMinutes as sr, toTimeCourseRows as st, bioTemplateControlsToFormSchema as t, bioTemplatePresets as tn, durationMinutes as tr, toSamplePrepDataFrame as tt, getBioTemplateComponentBindings as u, getBioTemplateInfo as un, parseTime as ur, toWellPlateWells as ut, toBioTemplateComponentPropsById as v, controlsToSectionFormSchemas as vn, useListSelection as vr, createCalibrationCurveTemplate as vt, toAssayMatrixSampleOptions as w, defineControlComponentBindings as wn, BaseCheckbox_default as wr, createInstrumentRunTemplate as wt, toAssayMatrixColumns as x, controlsToTopBarSettingsConfig as xn, BaseSlider_default as xr, createElisaAssayCollection as xt, toBioTemplateComponentSnippets as y, controlsToSettingsSchema as yn, useSelectionLimit as yr, createDefaultBioTemplate as yt, toProtocolColumns as z, ConcentrationInput_default as zn, ensureTemplateEnvelope as zt };
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- //# sourceMappingURL=templates-Cyt0Suwf.js.map
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