@monoes/monomindcli 2.8.4 → 2.9.1

package/dist/src/mcp-tools/types.js

@@ -2,97 +2,15 @@
  * MCP Tool Types for CLI
  *
  * Local type definitions to avoid external imports outside package boundary.
- */
-import { statSync, readFileSync, existsSync, mkdirSync, copyFileSync } from 'node:fs';
-import { join, dirname, resolve } from 'node:path';
-/**
- * Returns the effective project working directory.
- * Prefers MONOMIND_CWD (set by the install script for global/MCP installs
- * where process.cwd() may resolve to '/') over the real process.cwd().
- */
-export function getProjectCwd() {
-    return process.env.MONOMIND_CWD || process.cwd();
-}
-/**
- * Returns the stable Monomind data root that survives branch switches and is
- * shared across all git worktrees of the same repository.
- *
- * Resolution order:
- *   1. MONOMIND_DATA_DIR env var — allows overriding to e.g. ~/.monomind/<project>
- *   2. <repo>/.git/monomind/     — regular repo (branch-agnostic, shared by design)
- *   3. <main-repo>/.git/monomind/— worktree: .git is a pointer file → resolve to
- *                                  the shared .git dir of the main worktree
- *   4. <cwd>/.monomind/          — fallback when git is unavailable
- *
- * Mirrors the _getGitMonomindDir() function in server.mjs so session, task,
- * memory, and org data all land in the same stable location.
- */
-const _dataRootCache = new Map();
-export function getMonomindDataRoot(cwd) {
-    if (process.env.MONOMIND_DATA_DIR)
-        return process.env.MONOMIND_DATA_DIR;
-    const workDir = cwd || getProjectCwd();
-    if (_dataRootCache.has(workDir))
-        return _dataRootCache.get(workDir);
-    let result;
-    try {
-        const gitEntry = join(workDir, '.git');
-        const st = statSync(gitEntry);
-        if (st.isDirectory()) {
-            result = join(gitEntry, 'monomind');
-        }
-        else {
-            // Worktree: .git is a text file "gitdir: /main/.git/worktrees/name"
-            const m = readFileSync(gitEntry, 'utf8').match(/^gitdir:\s*(.+)/m);
-            if (m) {
-                const worktreeDir = resolve(workDir, m[1].trim());
-                const commonGitDir = dirname(dirname(worktreeDir));
-                result = join(commonGitDir, 'monomind');
-            }
-            else {
-                result = join(workDir, '.monomind');
-            }
-        }
-    }
-    catch {
-        result = join(workDir, '.monomind');
-    }
-    _dataRootCache.set(workDir, result);
-    return result;
-}
-/**
- * One-time migration for the agent/task/hive/swarm stores that historically lived
- * under `<projectCwd>/.monomind/<subpath>` (via getProjectCwd()) before being
- * consolidated onto the canonical getMonomindDataRoot() location (typically
- * `<repo>/.git/monomind/<subpath>`). Several MCP tool files (agent-tools.ts,
- * hive-mind-tools.ts, swarm-tools.ts, system-tools.ts) used to read/write the
- * legacy path directly, causing the same logical store to physically split from
- * task-tools.ts/session-tools.ts, which always used getMonomindDataRoot().
- *
- * If the canonical file is missing but the legacy file exists, copy (never move,
- * for safety) the legacy file into place so pre-existing data isn't silently
- * orphaned. Best-effort and idempotent — never throws, and it's a no-op once the
- * canonical file exists or when the two paths already coincide (e.g. no .git).
  *
- * @param canonicalPath Absolute path under getMonomindDataRoot() the tool now reads from.
- * @param legacySubpath Path relative to `.monomind/` that the tool used to read from
- *   (e.g. `join('agents', 'store.json')`).
- * @param cwd Optional project cwd override (defaults to getProjectCwd()).
+ * A1: path helpers (getProjectCwd / getMonomindDataRoot / migrateLegacyStoreFile)
+ * used to be defined inline here, which inverted the dependency direction —
+ * every layer (commands/, mcp-client.ts, monovector/, orgrt/) imported from
+ * mcp-tools/ just to resolve the project root. They now live in
+ * `utils/paths.ts` and are re-exported here so existing imports keep working.
+ * New code should import from `../utils/paths.js` directly.
  */
-export function migrateLegacyStoreFile(canonicalPath, legacySubpath, cwd) {
-    try {
-        if (existsSync(canonicalPath))
-            return;
-        const legacyPath = join(cwd || getProjectCwd(), '.monomind', legacySubpath);
-        if (legacyPath === canonicalPath)
-            return;
-        if (!existsSync(legacyPath))
-            return;
-        mkdirSync(dirname(canonicalPath), { recursive: true });
-        copyFileSync(legacyPath, canonicalPath);
-    }
-    catch {
-        // Best-effort; leave both stores as-is on any failure.
-    }
-}
+// Re-export the path helpers for backward compatibility with existing callers
+// that import from this module. New code should prefer `utils/paths.js`.
+export { getProjectCwd, getMonomindDataRoot, migrateLegacyStoreFile } from '../utils/paths.js';
 //# sourceMappingURL=types.js.map

package/dist/src/mcp-tools/types.js.map

@@ -1 +1 @@
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+{"version":3,"file":"types.js","sourceRoot":"","sources":["../../../src/mcp-tools/types.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAEH,8EAA8E;AAC9E,yEAAyE;AACzE,OAAO,EAAE,aAAa,EAAE,mBAAmB,EAAE,sBAAsB,EAAE,MAAM,mBAAmB,CAAC"}

package/dist/src/memory/file-permissions.d.ts

@@ -0,0 +1,15 @@
+/**
+ * File-permission hardening for the local memory store.
+ *
+ * memory.db holds personal "second brain" data (memories, knowledge,
+ * session notes). sql.js exports it via writeFileSync, which creates the
+ * file with the process umask default — world-readable on many systems.
+ * Restrict the persisted DB to owner read/write (0600) after every write.
+ */
+/**
+ * Restrict a persisted memory DB file to owner-only (0600).
+ * No-op on win32 (POSIX modes unsupported) and best-effort elsewhere —
+ * a chmod failure must never break a memory write.
+ */
+export declare function secureDbFilePermissions(filePath: string): void;
+//# sourceMappingURL=file-permissions.d.ts.map

package/dist/src/memory/file-permissions.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/memory/file-permissions.js

@@ -0,0 +1,25 @@
+/**
+ * File-permission hardening for the local memory store.
+ *
+ * memory.db holds personal "second brain" data (memories, knowledge,
+ * session notes). sql.js exports it via writeFileSync, which creates the
+ * file with the process umask default — world-readable on many systems.
+ * Restrict the persisted DB to owner read/write (0600) after every write.
+ */
+import { chmodSync } from 'node:fs';
+/**
+ * Restrict a persisted memory DB file to owner-only (0600).
+ * No-op on win32 (POSIX modes unsupported) and best-effort elsewhere —
+ * a chmod failure must never break a memory write.
+ */
+export function secureDbFilePermissions(filePath) {
+    if (process.platform === 'win32')
+        return;
+    try {
+        chmodSync(filePath, 0o600);
+    }
+    catch {
+        // best effort — e.g. filesystem without POSIX permission support
+    }
+}
+//# sourceMappingURL=file-permissions.js.map

package/dist/src/memory/file-permissions.js.map

@@ -0,0 +1 @@
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package/dist/src/memory/memory-bridge.d.ts.map

@@ -1 +1 @@
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package/dist/src/memory/memory-bridge.js

@@ -16,6 +16,20 @@ import * as fs from 'fs';
 // ===== Embedding validation =====
 const MAX_EMBEDDING_DIMS = 8192;
 const MAX_EMBEDDING_JSON_BYTES = MAX_EMBEDDING_DIMS * 32; // ~256KB ceiling
+/**
+ * R1: surface swallowed errors when DEBUG/MONOMIND_DEBUG is on. The bridge
+ * has ~12 `} catch { return null; }` sites that collapse SQLITE_BUSY,
+ * EACCES, disk-full, and schema mismatches into "no matches" with zero
+ * diagnostic. Behavior contract (return null on failure) is unchanged;
+ * observability is added. Caller passes the bridge fn name + the thrown
+ * value so the log is greppable per call site.
+ */
+function logBridgeError(label, err) {
+    if (!(process.env.DEBUG || process.env.MONOMIND_DEBUG))
+        return;
+    const msg = err instanceof Error ? `${err.name}: ${err.message}` : String(err);
+    console.error(`[bridge:${label}] ${msg}`);
+}
 export function safeParseEmbedding(raw) {
     if (typeof raw !== 'string' || raw.length === 0)
         return null;
@@ -190,7 +204,8 @@ function getAutomemConfig() {
                 ? Math.max(0, Math.min(1, config.scaffold.feedbackInfluence)) : defaults.feedbackInfluence,
         };
     }
-    catch {
+    catch (e) {
+        logBridgeError('loadBridgeConfig', e);
         return defaults;
     }
 }
@@ -367,8 +382,13 @@ async function getBackend(dbPath) {
         if (backendSlots.size >= MAX_BACKEND_SLOTS) {
             const oldest = backendSlots.keys().next().value;
             const evicted = backendSlots.get(oldest);
+            // shutdownBridge() below uses .shutdown() — that's the real method these
+            // backends expose. .close() doesn't exist on either backend class, so this
+            // resolved to undefined via the optional chain every time and never actually
+            // released the connection: every 6th distinct database path opened in this
+            // process leaked the oldest slot's connection for the process lifetime.
             try {
-                evicted?.instance?.close?.();
+                await evicted?.instance?.shutdown?.();
             }
             catch { /* best effort */ }
             backendSlots.delete(oldest);
@@ -416,6 +436,12 @@ async function getBackend(dbPath) {
                     optimize: true,
                     defaultNamespace: 'default',
                     embeddingGenerator: _embedder ?? undefined,
+                    // R3: when the MCP server and a CLI hook subprocess hit the same
+                    // memory.db at the same time, SQLite returns SQLITE_BUSY and the
+                    // bridge silently no-ops. busy_timeout tells SQLite to wait up to
+                    // 5s for a lock before giving up, which covers the normal handoff
+                    // window. The native @monoes/memory backend reads this key.
+                    busyTimeoutMs: 5000,
                 };
                 const origLog = console.log;
                 console.log = (...args) => {
@@ -444,11 +470,12 @@ async function getBackend(dbPath) {
                 slot.available = true;
                 return backend;
             }
-            catch {
+            catch (e) {
                 slot.attempts++;
                 slot.promise = null;
                 if (slot.attempts >= MAX_INIT_ATTEMPTS)
                     slot.available = false;
+                logBridgeError('getBackend', e);
                 return null;
             }
         })();
@@ -613,34 +640,61 @@ export async function bridgeSearchEntries(options) {
         // so keyword results are merged into semantic results (union, deduplicated
         // by key) to ensure every findable entry surfaces regardless of whether
         // it has an embedding.  Semantic hits take priority on score.
+        //
+        // Issue #66: When the backend has FTS5, keyword matching runs inside
+        // SQLite via MATCH — orders of magnitude faster than the old path that
+        // loaded up to 50k rows and scanned them in JS. The JS fallback is
+        // kept for sql.js WASM builds that lack the FTS5 extension.
         {
-            const entries = await backend.query({
-                type: 'exact',
-                ...(namespace ? { namespace } : {}),
-                limit: 50000,
-            });
             const tokens = queryStr.toLowerCase().split(/[^a-z0-9]+/).filter(t => t.length > 1);
+            let keywordHits = [];
             if (tokens.length) {
-                const keywordHits = entries
-                    .map((e) => {
-                    const haystack = `${e.key || ''} ${e.content || ''}`.toLowerCase();
-                    const hits = tokens.filter(t => haystack.includes(t)).length;
-                    return { e, score: hits / tokens.length };
-                })
-                    .filter((x) => x.score > 0)
-                    .sort((a, b) => b.score - a.score)
-                    .slice(0, limit)
-                    .map(({ e, score }) => ({
-                    id: e.id,
-                    key: e.key,
-                    content: capResultContent(e.content || ''),
-                    // Raw token-overlap fraction, NOT rescaled to look like a cosine.
-                    score,
-                    namespace: e.namespace,
-                    provenance: `keyword:${score.toFixed(2)}`,
-                    tags: e.tags ?? [],
-                    _createdAt: e.createdAt || 0,
-                }));
+                // ── FTS5 fast path ──────────────────────────────────────────
+                const fts5Results = typeof backend.keywordSearch === 'function'
+                    ? await backend.keywordSearch(queryStr, { namespace, limit }).catch(() => null)
+                    : null;
+                if (fts5Results !== null && fts5Results.length > 0) {
+                    // FTS5 rank is negative (lower = better); normalise to 0–1.
+                    const maxRank = Math.max(...fts5Results.map((r) => Math.abs(r.rank)), 1);
+                    keywordHits = fts5Results.map((r) => ({
+                        id: r.id,
+                        key: r.key,
+                        content: capResultContent(r.content || ''),
+                        score: Math.abs(r.rank) / maxRank, // normalised 0–1
+                        namespace: r.namespace,
+                        provenance: `keyword-fts5:${(Math.abs(r.rank) / maxRank).toFixed(2)}`,
+                        tags: [],
+                        _createdAt: 0,
+                    }));
+                }
+                else {
+                    // ── JS fallback (no FTS5 or empty FTS5 result) ────────────
+                    const entries = await backend.query({
+                        type: 'exact',
+                        ...(namespace ? { namespace } : {}),
+                        limit: 50000,
+                    });
+                    keywordHits = entries
+                        .map((e) => {
+                        const haystack = `${e.key || ''} ${e.content || ''}`.toLowerCase();
+                        const hits = tokens.filter(t => haystack.includes(t)).length;
+                        return { e, score: hits / tokens.length };
+                    })
+                        .filter((x) => x.score > 0)
+                        .sort((a, b) => b.score - a.score)
+                        .slice(0, limit)
+                        .map(({ e, score }) => ({
+                        id: e.id,
+                        key: e.key,
+                        content: capResultContent(e.content || ''),
+                        // Raw token-overlap fraction, NOT rescaled to look like a cosine.
+                        score,
+                        namespace: e.namespace,
+                        provenance: `keyword:${score.toFixed(2)}`,
+                        tags: e.tags ?? [],
+                        _createdAt: e.createdAt || 0,
+                    }));
+                }
                 if (results.length === 0) {
                     // No semantic results — keyword is all we have.
                     results = keywordHits;
@@ -708,7 +762,8 @@ export async function bridgeSearchEntries(options) {
             ...(searchMethod === 'semantic' ? {} : { fallbackReason }),
         };
     }
-    catch {
+    catch (e) {
+        logBridgeError('bridgeSearchEntries', e);
         return null;
     }
 }
@@ -740,7 +795,8 @@ export async function bridgeListEntries(options) {
             total: entries.length,
         };
     }
-    catch {
+    catch (e) {
+        logBridgeError('bridgeListEntries', e);
         return null;
     }
 }
@@ -770,7 +826,8 @@ export async function bridgeGetEntry(options) {
             },
         };
     }
-    catch {
+    catch (e) {
+        logBridgeError('bridgeGetEntry', e);
         return null;
     }
 }
@@ -793,7 +850,8 @@ export async function bridgeDeleteEntry(options) {
             await flushBackend(backend);
         return { success: true, deleted };
     }
-    catch {
+    catch (e) {
+        logBridgeError('bridgeDeleteEntry', e);
         return { success: false, deleted: false };
     }
 }
@@ -806,7 +864,8 @@ export async function bridgeGenerateEmbedding(text, dbPath) {
         const emb = await _embedder(text);
         return { embedding: Array.from(emb), dimensions: emb.length, model: BRIDGE_EMBEDDING_MODEL };
     }
-    catch {
+    catch (e) {
+        logBridgeError('bridgeEmbedText', e);
         return null;
     }
 }
@@ -826,7 +885,8 @@ export async function bridgeLoadEmbeddingModel(dbPath) {
             loadTime: Date.now() - startTime,
         };
     }
-    catch {
+    catch (e) {
+        logBridgeError('bridgeLoadEmbeddingModel', e);
         return null;
     }
 }