@monoes/monomindcli 2.11.12 → 2.13.0

package/dist/src/init/claudemd-generator.js

@@ -6,8 +6,23 @@
  * Templates: minimal | standard | full | security | performance | solo
  * All templates use bullet-format rules with imperative keywords for enforceability.
  */
-import { createRequire } from 'node:module';
+import { agentCommand } from '../commands/agent.js';
+import { hooksCommand } from '../commands/hooks.js';
+import { initCommand } from '../commands/init.js';
+import { memoryCommand } from '../commands/memory.js';
+import { monoswarmCommand } from '../commands/monoswarm.js';
+import { sessionCommand } from '../commands/session.js';
+import { taskCommand } from '../commands/task.js';
+import { WORKER_COUNT, WORKER_ROWS } from './generated-counts.js';
+import { _isOptionalPackageResolvable, subcommandCount, workerTableRows } from './shared.js';
 import { detectProjectProfile } from './shared-instructions-generator.js';
+// i-035: `monoswarm_init` writes a JSON state record and starts no process —
+// nothing links its state to Claude Code's Task agents. The templates used to
+// tell every project it "MUST initialize the monoswarm" before complex work;
+// this is the honest replacement, worded from the same disclosure this repo
+// already carries at .claude/agents/core/coordinator.md:105 and
+// packages/@monomind/cli/CLAUDE.md's `adaptive`/`hybrid` topology annotation.
+export const HONEST_MONOSWARM_SENTENCE = "Monoswarm records topology, roster and votes in a state file; it starts no process, and Claude Code's Task-tool agents do the work.";
 /**
  * The File Organization and Build & Test sections used to prescribe `/src`
  * and npm unconditionally, which is wrong in every non-Node repo — GH #278
@@ -44,30 +59,33 @@ function detectStackConventions(targetDir) {
     }
 }
 let _availabilityCache = null;
+/** Test-only: `_availabilityCache` is module-level, so tests asserting both
+ * the resolvable and unresolvable branches must clear it between cases. */
+export function _resetOptionalPackageCache() {
+    _availabilityCache = null;
+}
 function detectOptionalPackages() {
     if (_availabilityCache)
         return _availabilityCache;
-    const req = createRequire(import.meta.url);
-    const resolvable = (pkg) => {
-        try {
-            req.resolve(pkg);
-            return true;
-        }
-        catch {
-            return false;
-        }
-    };
     _availabilityCache = {
-        hooks: resolvable('@monoes/hooks'),
-        mcp: resolvable('@monoes/mcp'),
-        routing: resolvable('@monoes/routing'),
-        monofence: resolvable('monofence-ai'),
+        hooks: _isOptionalPackageResolvable('@monoes/hooks'),
+        mcp: _isOptionalPackageResolvable('@monoes/mcp'),
+        routing: _isOptionalPackageResolvable('@monoes/routing'),
+        monofence: _isOptionalPackageResolvable('monofence-ai'),
     };
     return _availabilityCache;
 }
 function unavailNote(available) {
     return available ? '' : ' _(unavailable in this install)_';
 }
+// WORKER_COUNT (generated-counts.ts) is a build-time constant, computed
+// from source regardless of whether @monoes/hooks resolves at `init` time —
+// but printing it when the package is NOT resolvable would claim a count of
+// workers that cannot actually run in this install, the same class of lie
+// as a wrong number. Shown only when the package is genuinely available.
+function workerCountLabel(hooksAvailable) {
+    return hooksAvailable ? `${WORKER_COUNT} ` : '';
+}
 // --- Section Generators (each returns enforceable markdown) ---
 function behavioralRules() {
     return `## Behavioral Rules (Always Enforced)
@@ -153,10 +171,8 @@ function concurrencyRules() {
 function swarmOrchestration() {
     return `## Monoswarm Orchestration
 
-- MUST initialize the monoswarm using CLI tools when starting complex tasks
 - MUST spawn concurrent agents using Claude Code's Task tool
-- Never use CLI tools alone for execution — Task tool agents do the actual work
-- MUST call CLI tools AND Task tool in ONE message for complex work`;
+- ${HONEST_MONOSWARM_SENTENCE}`;
 }
 // Consolidated spawn/anti-drift rule — emitted ONCE in the standard template
 // (previously repeated across Monoswarm Orchestration, Anti-Drift, and
@@ -164,7 +180,7 @@ function swarmOrchestration() {
 function swarmRules() {
     return `## Monoswarm Rules
 
-- MUST initialize the monoswarm for complex tasks: \`npx monomind@latest monoswarm init --topology hierarchical --max-agents 8 --strategy specialized\`
+- ${HONEST_MONOSWARM_SENTENCE}
 - ALWAYS spawn ALL agents in ONE message via the Task tool with \`run_in_background: true\` — CLI tools coordinate, Task agents do the work
 - After spawning, STOP — never poll TaskOutput or check monoswarm status; trust agents to return
 - When agent results arrive, review ALL results before proceeding
@@ -178,11 +194,7 @@ function antiDriftConfig() {
 - Use specialized strategy for clear role boundaries
 - Use \`majority\` consensus for monoswarm
 - Run frequent checkpoints via \`post-task\` hooks
-- Keep shared memory namespace for all agents
-
-\`\`\`bash
-npx monomind@latest monoswarm init --topology hierarchical --max-agents 8 --strategy specialized
-\`\`\``;
+- Keep shared memory namespace for all agents`;
 }
 function autoStartProtocol() {
     return `## Monoswarm Protocols & Routing
@@ -192,10 +204,7 @@ function autoStartProtocol() {
 When the user requests a complex task, spawn agents in background and WAIT:
 
 \`\`\`javascript
-// STEP 1: Initialize monoswarm coordination
-Bash("npx monomind@latest monoswarm init --topology hierarchical --max-agents 8 --strategy specialized")
-
-// STEP 2: Spawn ALL agents IN BACKGROUND in a SINGLE message
+// STEP 1: Spawn ALL agents IN BACKGROUND in a SINGLE message
 Task({prompt: "Research requirements...", subagent_type: "researcher", run_in_background: true})
 Task({prompt: "Design architecture...", subagent_type: "system-architect", run_in_background: true})
 Task({prompt: "Implement solution...", subagent_type: "coder", run_in_background: true})
@@ -211,12 +220,7 @@ Task({prompt: "Review code quality...", subagent_type: "reviewer", run_in_backgr
 | 3 | Feature | coordinator, architect, coder, tester, reviewer |
 | 5 | Refactor | coordinator, architect, coder, reviewer |
 | 7 | Performance | coordinator, perf-engineer, coder |
-| 9 | Security | coordinator, security-architect, auditor |
-
-### Task Complexity Detection
-
-- AUTO-INVOKE MONOSWARM when task involves: 3+ files, new features, cross-module refactoring, API changes, security, or performance work
-- SKIP MONOSWARM for: single file edits, simple bug fixes (1-2 lines), documentation updates, configuration changes`;
+| 9 | Security | coordinator, security-architect, auditor |`;
 }
 function executionRules() {
     return `## Monoswarm Execution Rules
@@ -235,13 +239,13 @@ function cliCommandsTable() {
 
 | Command | Subcommands | Description |
 |---------|-------------|-------------|
-| \`init\` | 5 | Project initialization |
-| \`agent\` | 7 | Agent lifecycle management |
-| \`monoswarm\` | 6 | Multi-agent coordination |
-| \`memory\` | 12 | SQLite memory with ANN search |
-| \`task\` | 5 | Task creation and lifecycle |
-| \`session\` | 6 | Session state management |
-| \`hooks\` | 29 | Self-learning hooks + 8 background workers${unavailNote(avail.hooks)} |
+| \`init\` | ${subcommandCount(initCommand)} | Project initialization |
+| \`agent\` | ${subcommandCount(agentCommand)} | Agent lifecycle management |
+| \`monoswarm\` | ${subcommandCount(monoswarmCommand)} | Multi-agent coordination |
+| \`memory\` | ${subcommandCount(memoryCommand)} | SQLite memory with ANN search |
+| \`task\` | ${subcommandCount(taskCommand)} | Task creation and lifecycle |
+| \`session\` | ${subcommandCount(sessionCommand)} | Session state management |
+| \`hooks\` | ${subcommandCount(hooksCommand)} | Self-learning hooks + ${workerCountLabel(avail.hooks)}background workers${unavailNote(avail.hooks)} |
 
 > Note: there is no \`neural\` CLI command. Neural pattern learning was merged
 > into \`hooks intelligence\`. See \`doc/concepts/monoswarm.md\` for monoswarm
@@ -250,11 +254,11 @@ function cliCommandsTable() {
 ### Quick CLI Examples
 
 \`\`\`bash
-npx monomind@latest init --wizard
-npx monomind@latest agent spawn -t coder --name my-coder
-npx monomind@latest monoswarm init --v1-mode
-npx monomind@latest memory search --query "authentication patterns"
-npx monomind@latest doctor --fix
+npx monomind init wizard
+npx monomind agent spawn -t coder --name my-coder
+npx monomind monoswarm init --v1-mode
+npx monomind memory search --query "authentication patterns"
+npx monomind doctor --fix
 \`\`\``;
 }
 function agentTypes() {
@@ -277,7 +281,8 @@ subset worth routing to by name; it is not the complete set.
 }
 function hooksSystem() {
     const avail = detectOptionalPackages();
-    return `## Hooks System (29 Hook Subcommands + 8 Background Workers)
+    const workerHeading = avail.hooks ? ` + ${WORKER_COUNT} Background Workers` : '';
+    return `## Hooks System (${subcommandCount(hooksCommand)} Hook Subcommands${workerHeading})
 
 ### Essential Hooks
 
@@ -285,7 +290,7 @@ function hooksSystem() {
 |------|-------------|
 | \`pre-task\` / \`post-task\` | Task lifecycle with learning |
 | \`pre-edit\` / \`post-edit\` | File editing with pattern logging |
-| \`session-start\` / \`session-end\` | Session state persistence |
+| \`session-restore\` / \`session-end\` | Session state persistence |
 | \`route\` | Route task to optimal agent |
 | \`intelligence\` | Pattern-learning intelligence system |
 | \`worker\` | Background worker management |
@@ -294,20 +299,14 @@ function hooksSystem() {
 
 | Worker | Priority | Description |
 |--------|----------|-------------|
-| \`map\` | normal | Codebase mapping |
-| \`audit\` | high | Security audit |
-| \`optimize\` | normal | Performance snapshot |
-| \`consolidate\` | low | Memory consolidation |
-| \`ddd\` | low | DDD progress tracking |
-| \`security\` | high | Secret/vulnerability scan |
-| \`performance\`, \`health\`, \`swarm\`, \`git\`, \`learning\`, \`adr\`, \`patterns\`, \`cache\`, \`progress\` | various | See \`hooks worker list\` for the full 8 |
+${workerTableRows(WORKER_ROWS)}
 
 Metrics-producing workers refresh at session start when output is >6h old.
 ${avail.hooks ? '' : '\n> \\@monoes/hooks is not resolvable in this install — background workers will fail to load (see `hooks worker list`). This is an install/publish gap, not a project misconfiguration.\n'}
 \`\`\`bash
-npx monomind@latest hooks pre-task --description "[task]"
-npx monomind@latest hooks post-task --task-id "[id]" --success true
-npx monomind@latest hooks worker run audit
+npx monomind hooks pre-task --description "[task]"
+npx monomind hooks post-task --task-id "[id]" --success true
+npx monomind hooks worker run audit
 \`\`\``;
 }
 function learningProtocol() {
@@ -315,14 +314,14 @@ function learningProtocol() {
 
 ### Before Starting Any Task
 \`\`\`bash
-npx monomind@latest memory search --query "[task keywords]" --namespace patterns
-npx monomind@latest hooks route --task "[task description]"
+npx monomind memory search --query "[task keywords]" --namespace patterns
+npx monomind hooks route --task "[task description]"
 \`\`\`
 
 ### After Completing Any Task Successfully
 \`\`\`bash
-npx monomind@latest memory store --namespace patterns --key "[pattern-name]" --value "[what worked]"
-npx monomind@latest hooks post-task --task-id "[id]" --success true --store-results true
+npx monomind memory store --namespace patterns --key "[pattern-name]" --value "[what worked]"
+npx monomind hooks post-task --task-id "[id]" --success true --store-results true
 \`\`\`
 
 - ALWAYS check memory before starting new features, debugging, or refactoring
@@ -332,11 +331,11 @@ function memoryCommands() {
     return `## Memory Commands
 
 \`\`\`bash
-npx monomind@latest memory store --key "pattern-auth" --value "JWT with refresh" --namespace patterns
-npx monomind@latest memory search --query "authentication patterns"
+npx monomind memory store --key "pattern-auth" --value "JWT with refresh" --namespace patterns
+npx monomind memory search --query "authentication patterns"
 \`\`\`
 
-Full command reference: \`npx monomind@latest memory --help\``;
+Full command reference: \`npx monomind memory --help\``;
 }
 function securityRulesLight() {
     return `## Security Rules
@@ -345,7 +344,7 @@ function securityRulesLight() {
 - NEVER commit .env files or any file containing secrets
 - Always validate user input at system boundaries
 - Always sanitize file paths to prevent directory traversal
-- Run \`npx monomind@latest security scan\` after security-related changes`;
+- Run \`npx monomind security scan\` after security-related changes`;
 }
 function buildAndTest(options) {
     const { build, test, lint } = detectStackConventions(options.targetDir);
@@ -378,9 +377,9 @@ function securitySection() {
 
 ### Security Scanning
 \`\`\`bash
-npx monomind@latest security scan --depth full
-npx monomind@latest security audit --report
-npx monomind@latest security cve --check
+npx monomind security scan --depth full
+npx monomind security audit --report
+npx monomind security cve --check
 \`\`\`
 
 ### Security Agents
@@ -398,9 +397,9 @@ function performanceSection() {
 
 ### Performance Tooling
 \`\`\`bash
-npx monomind@latest performance benchmark --suite all
-npx monomind@latest performance profile --target "[component]"
-npx monomind@latest performance metrics --format table
+npx monomind performance benchmark --suite all
+npx monomind performance profile --target "[component]"
+npx monomind performance metrics --format table
 \`\`\`
 
 ### Performance Agents
@@ -417,6 +416,13 @@ function intelligenceSystem() {
 Routing and learning are JS-only — no native engine is required. Outcomes
 feed back into the recorded metrics so routing quality is measured, not assumed.`;
 }
+// i-041/i-117 §4: MONOMIND_MEMORY_BACKEND and MONOMIND_MEMORY_PATH had no
+// `process.env` reader anywhere in the repo (grepped — see claudemd-truth.test.ts
+// and the developer report for the exact commands run). MONOMIND_CONFIG
+// (services/config-file-manager.ts) and MONOMIND_LOG_LEVEL
+// (mcp-tools/monoswarm-tools.ts) do; ANTHROPIC_API_KEY is read by the SDK,
+// not by us. Keep only vars with a real reader — a var nobody reads is the
+// same class of lie as a wrong count.
 function envVars() {
     return `## Environment Variables
 
@@ -424,8 +430,6 @@ function envVars() {
 MONOMIND_CONFIG=./monomind.config.json
 MONOMIND_LOG_LEVEL=info
 ANTHROPIC_API_KEY=sk-ant-...
-MONOMIND_MEMORY_BACKEND=hybrid
-MONOMIND_MEMORY_PATH=./data/memory
 \`\`\``;
 }
 function secondBrainSection() {
@@ -471,13 +475,13 @@ function setupAndBoundary() {
 
 \`\`\`bash
 # Add MCP server — includes monograph, monoswarm, memory, hooks, all 66+ tools
-claude mcp add monomind -- npx -y monomind@latest mcp start
+claude mcp add monomind -- npx -y monomind mcp start
 
 # Verify everything works
-npx monomind@latest doctor --fix
+npx monomind doctor --fix
 \`\`\`
 
-> **Package name changed:** Use \`monomind@latest\` (not \`@monomind/cli@latest\` which is the old name and returns 404).
+> **Package name changed:** Use \`monomind\` (not \`@monomind/cli@latest\` which is the old name and returns 404).
 
 ## Claude Code vs CLI Tools
 

package/dist/src/init/claudemd-generator.js.map

@@ -1 +1 @@
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package/dist/src/init/copy-assets.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"copy-assets.d.ts","sourceRoot":"","sources":["../../../src/init/copy-assets.ts"],"names":[],"mappings":"AAAA;;GAEG;AAcH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAE1D;;GAEG;AACH,wBAAsB,UAAU,CAC9B,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAyGf;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CA8Ef;AAED;;GAEG;AACH,wBAAsB,UAAU,CAC9B,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAiEf"}
+{"version":3,"file":"copy-assets.d.ts","sourceRoot":"","sources":["../../../src/init/copy-assets.ts"],"names":[],"mappings":"AAAA;;GAEG;AAmBH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAE1D;;GAEG;AACH,wBAAsB,UAAU,CAC9B,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAyIf;AAED;;GAEG;AACH,wBAAsB,YAAY,CAChC,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAgFf;AAED;;GAEG;AACH,wBAAsB,UAAU,CAC9B,SAAS,EAAE,MAAM,EACjB,OAAO,EAAE,WAAW,EACpB,MAAM,EAAE,UAAU,GACjB,OAAO,CAAC,IAAI,CAAC,CAmEf"}

package/dist/src/init/copy-assets.js

@@ -3,7 +3,7 @@
  */
 import * as fs from 'node:fs';
 import * as path from 'node:path';
-import { AGENTS_MAP, COMMANDS_MAP, copyDirRecursive, countFiles, findSourceDir, previouslyGenerated, recordGenerated, SKILLS_MAP, } from './shared.js';
+import { AGENTS_MAP, allShippedAgents, allShippedCommands, allShippedSkills, COMMANDS_MAP, copyDirRecursive, countFiles, findSourceDir, listFilesRecursive, previouslyGenerated, recordGenerated, retireGeneratedEntry, SKILLS_MAP, } from './shared.js';
 /**
  * Copy skills from source
  */
@@ -44,17 +44,51 @@ export async function copySkills(targetDir, options, result) {
             .readdirSync(sourceSkillsDir)
             .filter((n) => n.startsWith(prefix) && fs.existsSync(path.join(sourceSkillsDir, n, 'SKILL.md'))));
     }
-    // Remove stale skill directories that a PREVIOUS init generated and this
-    // version no longer ships. Entries init never wrote (user-authored skills,
-    // skills installed by other tools) are left untouched — see readInitManifest.
+    // Retire skill directories that this version no longer ships ANYWHERE —
+    // not "the user didn't select this run". o-38: the sweep used to compare
+    // against `knownSkills` (this run's selection, filtered by
+    // options.skills.{core,memory,github,browser,advanced,all}), so a
+    // documented flag like `--minimal` deleted every previously-installed
+    // skill outside the minimal set — no version skew needed. The correct
+    // comparison is the full shipped catalogue: a skill still shipped but
+    // merely not selected this run is left completely alone (no retire, no
+    // delete, no mirror change); only a name absent from every SKILLS_MAP
+    // section — genuinely dropped upstream — is stale. Entries init never
+    // wrote at all (user-authored skills, skills installed by other tools)
+    // are left untouched either way — see readInitManifest.
     const knownSkills = new Set([...new Set(skillsToCopy)]);
+    const shippedSkills = allShippedSkills(sourceSkillsDir);
     const priorSkills = previouslyGenerated(targetDir, 'skills');
     if (fs.existsSync(targetSkillsDir)) {
         for (const existing of fs.readdirSync(targetSkillsDir)) {
-            if (!knownSkills.has(existing) && priorSkills.has(existing)) {
-                const stalePath = path.join(targetSkillsDir, existing);
-                fs.rmSync(stalePath, { recursive: true, force: true });
-                result.created.files.push(`[cleaned] .claude/skills/${existing} (stale)`);
+            if (shippedSkills.has(existing) || !priorSkills.has(existing))
+                continue;
+            const stalePath = path.join(targetSkillsDir, existing);
+            // Capture the .claude copy's own file list before retiring it, so the
+            // mirror sweep below can tell regenerated content from a file added
+            // directly inside a mirror.
+            const claudeFiles = listFilesRecursive(stalePath);
+            retireGeneratedEntry(targetDir, `skills/${existing}`, stalePath, result);
+            // o-38 §2·0b: mirrors are regenerated from source every run and hold
+            // no user content by construction, so a genuinely retired skill is
+            // DELETED from them outright, not retired — otherwise it stays
+            // advertised on two other platforms after disappearing from
+            // .claude/skills. If a mirror is found to hold a file the .claude
+            // copy did not, retire it too rather than deleting (same rule).
+            for (const [mirrorLabel, mirrorSkillsDir] of [
+                ['gemini-skills', path.join(targetDir, '.gemini', 'skills')],
+                ['agents-skills', path.join(targetDir, '.agents', 'skills')],
+            ]) {
+                const mirrorPath = path.join(mirrorSkillsDir, existing);
+                if (!fs.existsSync(mirrorPath))
+                    continue;
+                const mirrorHasExtra = [...listFilesRecursive(mirrorPath)].some((f) => !claudeFiles.has(f));
+                if (mirrorHasExtra) {
+                    retireGeneratedEntry(targetDir, `${mirrorLabel}/${existing}`, mirrorPath, result);
+                }
+                else {
+                    fs.rmSync(mirrorPath, { recursive: true, force: true });
+                }
             }
         }
     }
@@ -162,16 +196,18 @@ export async function copyCommands(targetDir, options, result) {
         result.errors.push('Could not find source commands directory');
         return;
     }
-    // Remove stale command files/directories that a PREVIOUS init generated and
-    // this version no longer ships. User-authored commands are never touched.
+    // Retire command files/directories that this version no longer ships
+    // ANYWHERE — see copySkills's doc comment for why this compares against
+    // the full shipped catalogue rather than `knownCommands` (this run's
+    // selection). User-authored commands are never touched either way.
     const knownCommands = new Set([...new Set(commandsToCopy)]);
+    const shippedCommands = allShippedCommands();
     const priorCommands = previouslyGenerated(targetDir, 'commands');
     if (fs.existsSync(targetCommandsDir)) {
         for (const existing of fs.readdirSync(targetCommandsDir)) {
-            if (!knownCommands.has(existing) && priorCommands.has(existing)) {
+            if (!shippedCommands.has(existing) && priorCommands.has(existing)) {
                 const stalePath = path.join(targetCommandsDir, existing);
-                fs.rmSync(stalePath, { recursive: true, force: true });
-                result.created.files.push(`[cleaned] .claude/commands/${existing} (stale)`);
+                retireGeneratedEntry(targetDir, `commands/${existing}`, stalePath, result);
             }
         }
     }
@@ -229,16 +265,18 @@ export async function copyAgents(targetDir, options, result) {
         result.errors.push('Could not find source agents directory');
         return;
     }
-    // Remove stale agent category directories that a PREVIOUS init generated and
-    // this version no longer ships. User-authored agent dirs are never touched.
+    // Retire agent category directories that this version no longer ships
+    // ANYWHERE — see copySkills's doc comment for why this compares against
+    // the full shipped catalogue rather than `knownAgents` (this run's
+    // selection). User-authored agent dirs are never touched either way.
     const knownAgents = new Set([...new Set(agentsToCopy)]);
+    const shippedAgents = allShippedAgents();
     const priorAgents = previouslyGenerated(targetDir, 'agents');
     if (fs.existsSync(targetAgentsDir)) {
         for (const existing of fs.readdirSync(targetAgentsDir)) {
-            if (!knownAgents.has(existing) && priorAgents.has(existing)) {
+            if (!shippedAgents.has(existing) && priorAgents.has(existing)) {
                 const stalePath = path.join(targetAgentsDir, existing);
-                fs.rmSync(stalePath, { recursive: true, force: true });
-                result.created.files.push(`[cleaned] .claude/agents/${existing} (stale)`);
+                retireGeneratedEntry(targetDir, `agents/${existing}`, stalePath, result);
             }
         }
     }

package/dist/src/init/copy-assets.js.map

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package/dist/src/init/executor.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"executor.d.ts","sourceRoot":"","sources":["../../../src/init/executor.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAqBH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAe1D,YAAY,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AAElD,OAAO,EAAE,cAAc,EAAE,yBAAyB,EAAE,MAAM,cAAc,CAAC;AAEzE;;GAEG;AACH,wBAAsB,WAAW,CAAC,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC,CA2Q3E;AAiPD;;;;GAIG;AACH,wBAAgB,6BAA6B,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAOlE;AA+BD;;;;GAIG;AACH,wBAAgB,oBAAoB,CAAC,QAAQ,SAAI,GAAG,MAAM,EAAE,CAqD3D;eAEc,WAAW"}
+{"version":3,"file":"executor.d.ts","sourceRoot":"","sources":["../../../src/init/executor.ts"],"names":[],"mappings":"AAAA;;;GAGG;AA0BH,OAAO,KAAK,EAAE,WAAW,EAAE,UAAU,EAAE,MAAM,YAAY,CAAC;AAe1D,YAAY,EAAE,aAAa,EAAE,MAAM,cAAc,CAAC;AAElD,OAAO,EAAE,cAAc,EAAE,yBAAyB,EAAE,MAAM,cAAc,CAAC;AAEzE;;GAEG;AACH,wBAAsB,WAAW,CAAC,OAAO,EAAE,WAAW,GAAG,OAAO,CAAC,UAAU,CAAC,CAqR3E;AAiPD;;;;GAIG;AACH,wBAAgB,6BAA6B,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAOlE;AA+BD;;;;GAIG;AACH,wBAAgB,oBAAoB,CAAC,QAAQ,SAAI,GAAG,MAAM,EAAE,CAqD3D;eAEc,WAAW"}

package/dist/src/init/executor.js

@@ -13,7 +13,7 @@ const __dirname = dirname(__filename);
 // i-066 follow-up finding 9: shared with routes-monoes.mjs and
 // write-claude.ts — see monoes-mcp-entry.mjs's own doc comment for why this
 // lives in a .mjs sibling rather than here.
-import { detectMonoesTokenLeak, formatMonoesLeakWarning } from '../mcp/monoes-mcp-entry.mjs';
+import { detectDashboardTokenLeak, detectMonoesTokenLeak, formatDashboardTokenLeakWarning, formatMonoesLeakWarning, } from '../mcp/monoes-mcp-entry.mjs';
 import { installPlatform } from '../platform-adapters/operations.js';
 import { copyAgents, copyCommands, copySkills } from './copy-assets.js';
 // Split modules
@@ -43,6 +43,7 @@ export async function executeInit(options) {
         },
         updated: [],
         skipped: [],
+        removed: [],
         errors: [],
         summary: {
             skillsCount: 0,
@@ -151,6 +152,13 @@ export async function executeInit(options) {
         const leakWarning = formatMonoesLeakWarning(await detectMonoesTokenLeak(targetDir));
         if (leakWarning)
             console.error(leakWarning);
+        // i-052 commit 3: same ordering guarantee, same reason — a project
+        // re-inited after the dashboard already wrote (and possibly
+        // committed) `.monomind/dashboard-token` must see this warning
+        // regardless of which components are selected.
+        const dashboardTokenWarning = formatDashboardTokenLeakWarning(await detectDashboardTokenLeak(targetDir));
+        if (dashboardTokenWarning)
+            console.error(dashboardTokenWarning);
         // Generate and write settings.json
         if (options.components.settings) {
             await writeSettings(targetDir, options, result);