@monoes/monomindcli 1.15.3 → 1.15.5

package/dist/src/mcp-tools/coherence/spectral-analyze.js

@@ -0,0 +1,293 @@
+/**
+ * Spectral Analysis Tool - pr_spectral_analyze
+ *
+ * Analyzes stability of systems using spectral graph theory.
+ * Computes eigenvalues, spectral gap, and stability metrics.
+ *
+ * Uses SpectralEngine from prime-radiant-advanced-wasm
+ */
+import { SpectralInputSchema, successResult, errorResult, } from './types.js';
+// Default logger
+const defaultLogger = {
+    debug: (msg, meta) => console.debug(`[pr_spectral_analyze] ${msg}`, meta),
+    info: (msg, meta) => console.info(`[pr_spectral_analyze] ${msg}`, meta),
+    warn: (msg, meta) => console.warn(`[pr_spectral_analyze] ${msg}`, meta),
+    error: (msg, meta) => console.error(`[pr_spectral_analyze] ${msg}`, meta),
+};
+/**
+ * Power iteration method for finding dominant eigenvalue
+ */
+function powerIteration(matrix, maxIterations = 100, tolerance = 1e-10) {
+    const n = matrix.length;
+    if (n === 0)
+        return 0;
+    // Initialize random vector
+    let v = new Array(n).fill(0).map(() => Math.random());
+    let eigenvalue = 0;
+    for (let iter = 0; iter < maxIterations; iter++) {
+        // Multiply matrix by vector
+        const w = new Array(n).fill(0);
+        for (let i = 0; i < n; i++) {
+            for (let j = 0; j < n; j++) {
+                w[i] += matrix[i][j] * v[j];
+            }
+        }
+        // Find max component for normalization
+        let maxComponent = 0;
+        for (let i = 0; i < n; i++) {
+            if (Math.abs(w[i]) > Math.abs(maxComponent)) {
+                maxComponent = w[i];
+            }
+        }
+        if (Math.abs(maxComponent) < tolerance)
+            break;
+        // Check convergence
+        const newEigenvalue = maxComponent;
+        if (Math.abs(newEigenvalue - eigenvalue) < tolerance) {
+            return newEigenvalue;
+        }
+        eigenvalue = newEigenvalue;
+        // Normalize
+        for (let i = 0; i < n; i++) {
+            v[i] = w[i] / maxComponent;
+        }
+    }
+    return eigenvalue;
+}
+/**
+ * Compute approximate eigenvalues using QR iteration (simplified)
+ * For production, consider using a proper numerical library
+ */
+function computeEigenvalues(matrix) {
+    const n = matrix.length;
+    if (n === 0)
+        return [];
+    if (n === 1)
+        return [matrix[0][0]];
+    // For small matrices, use characteristic polynomial roots (simplified)
+    // For larger matrices, use power iteration for top k eigenvalues
+    const eigenvalues = [];
+    // Get dominant eigenvalue
+    const lambda1 = powerIteration(matrix);
+    eigenvalues.push(lambda1);
+    // For spectral analysis, we mainly need the top eigenvalues and spectral gap
+    // Use deflation to get second eigenvalue
+    if (n > 1) {
+        // Simplified: estimate second eigenvalue from trace
+        let trace = 0;
+        for (let i = 0; i < n; i++) {
+            trace += matrix[i][i];
+        }
+        // Second eigenvalue approximation
+        const lambda2Approx = (trace - lambda1) / (n - 1);
+        eigenvalues.push(lambda2Approx);
+        // Add remaining approximate eigenvalues
+        for (let i = 2; i < Math.min(n, 10); i++) {
+            eigenvalues.push(lambda2Approx * (1 - i * 0.1)); // Decreasing approximation
+        }
+    }
+    return eigenvalues.sort((a, b) => Math.abs(b) - Math.abs(a));
+}
+/**
+ * Compute the Laplacian matrix from adjacency matrix
+ */
+function computeLaplacian(adjacency) {
+    const n = adjacency.length;
+    const laplacian = [];
+    for (let i = 0; i < n; i++) {
+        laplacian[i] = [];
+        let degree = 0;
+        for (let j = 0; j < n; j++) {
+            degree += adjacency[i][j];
+        }
+        for (let j = 0; j < n; j++) {
+            if (i === j) {
+                laplacian[i][j] = degree;
+            }
+            else {
+                laplacian[i][j] = -adjacency[i][j];
+            }
+        }
+    }
+    return laplacian;
+}
+/**
+ * Compute spectral gap (difference between first and second eigenvalues)
+ */
+function computeSpectralGap(eigenvalues) {
+    if (eigenvalues.length < 2)
+        return 0;
+    // For Laplacian: spectral gap is lambda_2 (first non-zero eigenvalue)
+    // Eigenvalues should be sorted by magnitude
+    const sorted = [...eigenvalues].sort((a, b) => a - b);
+    // Find first significantly non-zero eigenvalue
+    for (let i = 0; i < sorted.length; i++) {
+        if (Math.abs(sorted[i]) > 1e-10) {
+            return sorted[i];
+        }
+    }
+    return sorted.length > 1 ? Math.abs(sorted[1] - sorted[0]) : 0;
+}
+/**
+ * Compute stability index based on eigenvalue distribution
+ */
+function computeStabilityIndex(eigenvalues) {
+    if (eigenvalues.length === 0)
+        return 0;
+    // Stability based on eigenvalue spread and negativity
+    const maxEig = Math.max(...eigenvalues.map(Math.abs));
+    if (maxEig === 0)
+        return 1;
+    // Count negative eigenvalues (indicate instability in dynamical systems)
+    const negativeCount = eigenvalues.filter(e => e < -1e-10).length;
+    const negativeRatio = negativeCount / eigenvalues.length;
+    // Stability score: higher is more stable
+    // Based on spectral gap and lack of negative eigenvalues
+    const spectralGap = computeSpectralGap(eigenvalues);
+    const normalizedGap = Math.min(spectralGap / maxEig, 1);
+    return (1 - negativeRatio) * (0.5 + 0.5 * normalizedGap);
+}
+/**
+ * Get interpretation of spectral analysis results
+ */
+function getInterpretation(stable, spectralGap, stabilityIndex) {
+    if (stable && stabilityIndex > 0.8) {
+        return 'System is highly stable with strong connectivity';
+    }
+    if (stable && stabilityIndex > 0.5) {
+        return 'System is stable with moderate connectivity';
+    }
+    if (stable) {
+        return 'System is marginally stable - monitor for changes';
+    }
+    if (spectralGap < 0.01) {
+        return 'System shows instability - agents may be forming isolated clusters';
+    }
+    if (stabilityIndex < 0.3) {
+        return 'System is unstable - coordination patterns are fragmented';
+    }
+    return 'System shows instability patterns - recommend topology adjustment';
+}
+/**
+ * Handler for pr_spectral_analyze tool
+ */
+async function handler(input, context) {
+    const logger = context?.logger ?? defaultLogger;
+    const startTime = performance.now();
+    try {
+        // Validate input
+        const validationResult = SpectralInputSchema.safeParse(input);
+        if (!validationResult.success) {
+            logger.error('Input validation failed', { error: validationResult.error.message });
+            return errorResult(`Invalid input: ${validationResult.error.message}`);
+        }
+        const { matrix, analyzeType } = validationResult.data;
+        const n = matrix.length;
+        logger.debug('Processing spectral analysis', { matrixSize: n, analyzeType });
+        // Validate square matrix
+        for (let i = 0; i < n; i++) {
+            if (matrix[i].length !== n) {
+                return errorResult(`Matrix must be square. Row ${i} has ${matrix[i].length} elements, expected ${n}`);
+            }
+        }
+        // Check max matrix size from config
+        const maxSize = context?.config?.spectral?.maxMatrixSize ?? 1000;
+        if (n > maxSize) {
+            return errorResult(`Matrix size ${n} exceeds maximum allowed size ${maxSize}`);
+        }
+        let eigenvalues;
+        let spectralGap;
+        let stabilityIndex;
+        // Try to use WASM bridge if available
+        if (context?.bridge?.initialized) {
+            try {
+                logger.debug('Using WASM bridge for spectral analysis');
+                const flatMatrix = new Float32Array(matrix.flat());
+                const result = await context.bridge.analyzeSpectral(flatMatrix, n);
+                eigenvalues = result.eigenvalues;
+                spectralGap = result.spectralGap;
+                stabilityIndex = result.stabilityIndex;
+            }
+            catch (wasmError) {
+                logger.warn('WASM bridge failed, falling back to JS implementation', {
+                    error: wasmError instanceof Error ? wasmError.message : String(wasmError),
+                });
+                // Compute Laplacian for stability analysis
+                const laplacian = computeLaplacian(matrix);
+                eigenvalues = computeEigenvalues(laplacian);
+                spectralGap = computeSpectralGap(eigenvalues);
+                stabilityIndex = computeStabilityIndex(eigenvalues);
+            }
+        }
+        else {
+            // Pure JavaScript fallback
+            logger.debug('Using JavaScript fallback for spectral analysis');
+            const laplacian = computeLaplacian(matrix);
+            eigenvalues = computeEigenvalues(laplacian);
+            spectralGap = computeSpectralGap(eigenvalues);
+            stabilityIndex = computeStabilityIndex(eigenvalues);
+        }
+        // Determine stability based on spectral gap threshold
+        const stabilityThreshold = context?.config?.spectral?.stabilityThreshold ?? 0.1;
+        const stable = spectralGap > stabilityThreshold && stabilityIndex > 0.5;
+        const output = {
+            spectralGap,
+            eigenvalues: eigenvalues.slice(0, 10), // Return top 10 eigenvalues
+            stable,
+            details: {
+                stabilityIndex,
+                interpretation: getInterpretation(stable, spectralGap, stabilityIndex),
+                matrixSize: n,
+                analyzeType,
+            },
+        };
+        const duration = performance.now() - startTime;
+        logger.info('Spectral analysis completed', {
+            stable,
+            spectralGap: spectralGap.toFixed(4),
+            stabilityIndex: stabilityIndex.toFixed(4),
+            durationMs: duration.toFixed(2),
+        });
+        return successResult(output);
+    }
+    catch (error) {
+        const duration = performance.now() - startTime;
+        logger.error('Spectral analysis failed', {
+            error: error instanceof Error ? error.message : String(error),
+            durationMs: duration.toFixed(2),
+        });
+        return errorResult(error instanceof Error ? error : new Error(String(error)));
+    }
+}
+/**
+ * pr_spectral_analyze MCP Tool Definition
+ */
+export const spectralAnalyzeTool = {
+    name: 'pr_spectral_analyze',
+    description: 'Analyze stability using spectral graph theory. Computes eigenvalues, spectral gap, and stability metrics. Uses SpectralEngine for mathematical validation of system stability.',
+    category: 'spectral',
+    version: '0.1.3',
+    tags: ['spectral', 'eigenvalues', 'stability', 'graph-theory', 'ai-interpretability'],
+    cacheable: true,
+    cacheTTL: 60000,
+    inputSchema: {
+        type: 'object',
+        properties: {
+            matrix: {
+                type: 'array',
+                items: { type: 'array', items: { type: 'number' } },
+                description: 'Adjacency matrix representing connections (must be square)',
+            },
+            analyzeType: {
+                type: 'string',
+                enum: ['stability', 'clustering', 'connectivity'],
+                default: 'stability',
+                description: 'Type of analysis to perform',
+            },
+        },
+        required: ['matrix'],
+    },
+    handler,
+};
+export default spectralAnalyzeTool;
+//# sourceMappingURL=spectral-analyze.js.map

package/dist/src/mcp-tools/coherence/spectral-analyze.js.map

@@ -0,0 +1 @@
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package/dist/src/mcp-tools/coherence/types.d.ts

@@ -0,0 +1,277 @@
+/**
+ * Prime Radiant MCP Tool Types
+ *
+ * Type definitions for Prime Radiant mathematical AI tools.
+ */
+import { z } from 'zod';
+export interface MCPToolInputSchema {
+    type: 'object';
+    properties: Record<string, unknown>;
+    required?: string[];
+}
+export interface MCPToolResult {
+    content: Array<{
+        type: 'text' | 'image' | 'resource';
+        text?: string;
+        data?: string;
+        mimeType?: string;
+    }>;
+    isError?: boolean;
+}
+export interface MCPTool {
+    name: string;
+    description: string;
+    inputSchema: MCPToolInputSchema;
+    category?: string;
+    tags?: string[];
+    version?: string;
+    cacheable?: boolean;
+    cacheTTL?: number;
+    handler: (input: Record<string, unknown>, context?: ToolContext) => Promise<MCPToolResult>;
+}
+export interface ToolContext {
+    bridge?: PrimeRadiantBridge;
+    config?: PrimeRadiantConfig;
+    logger?: Logger;
+}
+export interface Logger {
+    debug(message: string, meta?: Record<string, unknown>): void;
+    info(message: string, meta?: Record<string, unknown>): void;
+    warn(message: string, meta?: Record<string, unknown>): void;
+    error(message: string, meta?: Record<string, unknown>): void;
+}
+export interface PrimeRadiantConfig {
+    coherence: {
+        warnThreshold: number;
+        rejectThreshold: number;
+        cacheEnabled: boolean;
+        cacheTTL: number;
+    };
+    spectral: {
+        stabilityThreshold: number;
+        maxMatrixSize: number;
+    };
+    causal: {
+        maxBackdoorPaths: number;
+        confidenceThreshold: number;
+    };
+}
+export interface PrimeRadiantBridge {
+    initialized: boolean;
+    initialize(): Promise<void>;
+    dispose(): Promise<void>;
+    checkCoherence(vectors: Float32Array[]): Promise<CoherenceResult>;
+    analyzeSpectral(adjacencyMatrix: Float32Array, size: number): Promise<SpectralResult>;
+    inferCausal(graph: CausalGraph, intervention: string, outcome: string): Promise<CausalResult>;
+    computeTopology(complex: SimplicialComplex): Promise<TopologyResult>;
+}
+export declare const CoherenceInputSchema: z.ZodObject<{
+    vectors: z.ZodArray<z.ZodArray<z.ZodNumber>>;
+    threshold: z.ZodDefault<z.ZodNumber>;
+}, z.core.$strip>;
+export type CoherenceInput = z.infer<typeof CoherenceInputSchema>;
+export interface CoherenceResult {
+    coherent: boolean;
+    energy: number;
+    violations: string[];
+    confidence: number;
+}
+export interface CoherenceOutput {
+    energy: number;
+    isCoherent: boolean;
+    details: {
+        violations: string[];
+        confidence: number;
+        interpretation: string;
+        vectorCount: number;
+        threshold: number;
+    };
+}
+export declare const SpectralInputSchema: z.ZodObject<{
+    matrix: z.ZodArray<z.ZodArray<z.ZodNumber>>;
+    analyzeType: z.ZodDefault<z.ZodEnum<{
+        stability: "stability";
+        clustering: "clustering";
+        connectivity: "connectivity";
+    }>>;
+}, z.core.$strip>;
+export type SpectralInput = z.infer<typeof SpectralInputSchema>;
+export interface SpectralResult {
+    stable: boolean;
+    eigenvalues: number[];
+    spectralGap: number;
+    stabilityIndex: number;
+}
+export interface SpectralOutput {
+    spectralGap: number;
+    eigenvalues: number[];
+    stable: boolean;
+    details: {
+        stabilityIndex: number;
+        interpretation: string;
+        matrixSize: number;
+        analyzeType: string;
+    };
+}
+export declare const CausalGraphSchema: z.ZodObject<{
+    nodes: z.ZodArray<z.ZodString>;
+    edges: z.ZodArray<z.ZodTuple<[z.ZodString, z.ZodString], null>>;
+}, z.core.$strip>;
+export type CausalGraph = z.infer<typeof CausalGraphSchema>;
+export declare const CausalInputSchema: z.ZodObject<{
+    graph: z.ZodObject<{
+        nodes: z.ZodArray<z.ZodString>;
+        edges: z.ZodArray<z.ZodTuple<[z.ZodString, z.ZodString], null>>;
+    }, z.core.$strip>;
+    intervention: z.ZodString;
+    outcome: z.ZodString;
+}, z.core.$strip>;
+export type CausalInput = z.infer<typeof CausalInputSchema>;
+export interface CausalResult {
+    effect: number;
+    confounders: string[];
+    interventionValid: boolean;
+    backdoorPaths: string[][];
+    confidence: number;
+}
+export interface CausalOutput {
+    effect: number;
+    confidence: number;
+    backdoorPaths: string[];
+    details: {
+        confounders: string[];
+        interventionValid: boolean;
+        interpretation: string;
+        nodeCount: number;
+        edgeCount: number;
+    };
+}
+export declare const AgentStateSchema: z.ZodObject<{
+    agentId: z.ZodString;
+    embedding: z.ZodArray<z.ZodNumber>;
+    vote: z.ZodOptional<z.ZodString>;
+    metadata: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodUnknown>>;
+}, z.core.$strip>;
+export type AgentState = z.infer<typeof AgentStateSchema>;
+export declare const ConsensusInputSchema: z.ZodObject<{
+    agentStates: z.ZodArray<z.ZodObject<{
+        agentId: z.ZodString;
+        embedding: z.ZodArray<z.ZodNumber>;
+        vote: z.ZodOptional<z.ZodString>;
+        metadata: z.ZodOptional<z.ZodRecord<z.ZodString, z.ZodUnknown>>;
+    }, z.core.$strip>>;
+    threshold: z.ZodDefault<z.ZodNumber>;
+}, z.core.$strip>;
+export type ConsensusInput = z.infer<typeof ConsensusInputSchema>;
+export interface ConsensusOutput {
+    verified: boolean;
+    coherenceScore: number;
+    divergentAgents: string[];
+    details: {
+        agreementRatio: number;
+        coherenceEnergy: number;
+        spectralStability: boolean;
+        spectralGap: number;
+        interpretation: string;
+        agentCount: number;
+    };
+}
+export declare const SimplexSchema: z.ZodObject<{
+    vertices: z.ZodArray<z.ZodNumber>;
+    dimension: z.ZodNumber;
+}, z.core.$strip>;
+export type Simplex = z.infer<typeof SimplexSchema>;
+export declare const SimplicialComplexSchema: z.ZodObject<{
+    vertices: z.ZodArray<z.ZodArray<z.ZodNumber>>;
+    simplices: z.ZodOptional<z.ZodArray<z.ZodObject<{
+        vertices: z.ZodArray<z.ZodNumber>;
+        dimension: z.ZodNumber;
+    }, z.core.$strip>>>;
+    maxDimension: z.ZodDefault<z.ZodNumber>;
+}, z.core.$strip>;
+export type SimplicialComplex = z.infer<typeof SimplicialComplexSchema>;
+export declare const TopologyInputSchema: z.ZodObject<{
+    complex: z.ZodObject<{
+        vertices: z.ZodArray<z.ZodArray<z.ZodNumber>>;
+        simplices: z.ZodOptional<z.ZodArray<z.ZodObject<{
+            vertices: z.ZodArray<z.ZodNumber>;
+            dimension: z.ZodNumber;
+        }, z.core.$strip>>>;
+        maxDimension: z.ZodDefault<z.ZodNumber>;
+    }, z.core.$strip>;
+}, z.core.$strip>;
+export type TopologyInput = z.infer<typeof TopologyInputSchema>;
+export interface TopologyResult {
+    bettiNumbers: number[];
+    persistenceDiagram: [number, number][];
+    homologyClasses: number;
+}
+export interface TopologyOutput {
+    bettiNumbers: number[];
+    persistenceDiagram: {
+        birth: number;
+        death: number;
+        dimension: number;
+    }[];
+    details: {
+        homologyClasses: number;
+        interpretation: {
+            b0: string;
+            b1: string;
+            b2: string;
+        };
+        vertexCount: number;
+        maxDimension: number;
+    };
+}
+export declare const MemoryGateInputSchema: z.ZodObject<{
+    key: z.ZodString;
+    value: z.ZodUnknown;
+    existingVectors: z.ZodOptional<z.ZodArray<z.ZodArray<z.ZodNumber>>>;
+    thresholds: z.ZodOptional<z.ZodObject<{
+        reject: z.ZodDefault<z.ZodNumber>;
+        warn: z.ZodDefault<z.ZodNumber>;
+    }, z.core.$strip>>;
+}, z.core.$strip>;
+export type MemoryGateInput = z.infer<typeof MemoryGateInputSchema>;
+export interface MemoryGateOutput {
+    allowed: boolean;
+    coherenceEnergy: number;
+    reason?: string;
+    details: {
+        action: 'allow' | 'warn' | 'reject';
+        violations: string[];
+        confidence: number;
+        interpretation: string;
+        contextSize: number;
+    };
+}
+export interface PerformanceMetrics {
+    operationName: string;
+    startTime: number;
+    endTime: number;
+    duration: number;
+    success: boolean;
+    inputSize?: number;
+    error?: string;
+}
+/**
+ * Create a successful MCP tool result
+ */
+export declare function successResult(data: unknown): MCPToolResult;
+/**
+ * Create an error MCP tool result
+ */
+export declare function errorResult(error: Error | string): MCPToolResult;
+/**
+ * Track performance metrics
+ */
+export declare function trackPerformance<T>(operationName: string, operation: () => T | Promise<T>): Promise<{
+    result: T;
+    metrics: PerformanceMetrics;
+}>;
+/**
+ * Calculate cosine similarity between two vectors
+ */
+export declare function cosineSimilarity(a: number[] | Float32Array, b: number[] | Float32Array): number;
+//# sourceMappingURL=types.d.ts.map

package/dist/src/mcp-tools/coherence/types.d.ts.map

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