@monoes/monograph 1.1.0 → 1.2.0

package/dist/src/graph/analyzer.js

@@ -1,4 +1,5 @@
 import { bidirectional } from 'graphology-shortest-path';
+import betweennessCentrality from 'graphology-metrics/centrality/betweenness.js';
 import { loadGraphFromDb } from './loader.js';
 export function getShortestPath(db, sourceId, targetId, maxDepth = 6) {
     const graph = loadGraphFromDb(db);
@@ -14,6 +15,21 @@ export function getShortestPath(db, sourceId, targetId, maxDepth = 6) {
         return null;
     }
 }
+/**
+ * Computes betweenness centrality for all nodes in the graph.
+ * Returns a Map from node id to centrality score (0–1 normalized).
+ *
+ * Betweenness centrality measures how often a node appears on the
+ * shortest path between other node pairs. High-centrality nodes are
+ * structural bridges — refactoring them has wide blast radius.
+ */
+export function getBetweennessCentrality(db) {
+    const graph = loadGraphFromDb(db);
+    if (graph.order === 0)
+        return new Map();
+    const scores = betweennessCentrality(graph, { normalized: true });
+    return new Map(Object.entries(scores));
+}
 export function getNodeDegrees(graph, nodeId) {
     if (!graph.hasNode(nodeId))
         return { in: 0, out: 0 };

package/dist/src/graph/analyzer.js.map

@@ -1 +1 @@
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package/dist/src/graph/author-analytics.d.ts

@@ -0,0 +1,18 @@
+import type { MonographDb } from '../storage/db.js';
+export type ChurnTrend = 'accelerating' | 'stable' | 'declining';
+export interface AuthorStats {
+    author: string;
+    commitCount: number;
+    filesOwned: number;
+    recentCommits: number;
+    churnTrend: ChurnTrend;
+    isBot: boolean;
+}
+export interface AuthorAnalyticsReport {
+    authors: AuthorStats[];
+    topOwners: AuthorStats[];
+    botAuthors: string[];
+    unownedFiles: number;
+}
+export declare function computeAuthorAnalytics(repoPath: string, db: MonographDb): AuthorAnalyticsReport;
+//# sourceMappingURL=author-analytics.d.ts.map

package/dist/src/graph/author-analytics.d.ts.map

@@ -0,0 +1 @@
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package/dist/src/graph/author-analytics.js

@@ -0,0 +1,151 @@
+import { execSync, spawnSync } from 'child_process';
+const BOT_PATTERNS = ['[bot]', 'noreply', 'github-actions', 'dependabot', 'renovate'];
+function isBot(email) {
+    const lower = email.toLowerCase();
+    return BOT_PATTERNS.some(p => lower.includes(p));
+}
+const EMPTY_REPORT = {
+    authors: [],
+    topOwners: [],
+    botAuthors: [],
+    unownedFiles: 0,
+};
+export function computeAuthorAnalytics(repoPath, db) {
+    // ── Parse git log ──────────────────────────────────────────────────────────
+    let logOutput;
+    try {
+        logOutput = execSync('git log --format="%ae|%ad" --date=unix', {
+            cwd: repoPath,
+            encoding: 'utf-8',
+            stdio: ['pipe', 'pipe', 'pipe'],
+        });
+    }
+    catch {
+        return EMPTY_REPORT;
+    }
+    const now = Math.floor(Date.now() / 1000);
+    const thirtyDaysAgo = now - 86400 * 30;
+    const sixtyDaysAgo = now - 86400 * 60;
+    // commitCount, recentCommits, priorCommits per author
+    const commitCount = new Map();
+    const recentCommits = new Map();
+    const priorCommits = new Map();
+    for (const line of logOutput.split('\n')) {
+        const trimmed = line.trim().replace(/^"|"$/g, '');
+        if (!trimmed)
+            continue;
+        const pipeIdx = trimmed.indexOf('|');
+        if (pipeIdx === -1)
+            continue;
+        const email = trimmed.slice(0, pipeIdx).trim();
+        const tsStr = trimmed.slice(pipeIdx + 1).trim();
+        const ts = parseInt(tsStr, 10);
+        if (!email || isNaN(ts))
+            continue;
+        commitCount.set(email, (commitCount.get(email) ?? 0) + 1);
+        if (ts > thirtyDaysAgo) {
+            recentCommits.set(email, (recentCommits.get(email) ?? 0) + 1);
+        }
+        else if (ts > sixtyDaysAgo) {
+            priorCommits.set(email, (priorCommits.get(email) ?? 0) + 1);
+        }
+    }
+    if (commitCount.size === 0)
+        return EMPTY_REPORT;
+    // ── File ownership ─────────────────────────────────────────────────────────
+    // Get File nodes with degree > 2
+    const fileRows = db.prepare(`
+    SELECT n.id, n.name, n.file_path
+    FROM nodes n
+    WHERE n.label = 'File'
+      AND n.file_path IS NOT NULL
+      AND (
+        SELECT COUNT(*) FROM edges e
+        WHERE e.source_id = n.id OR e.target_id = n.id
+      ) > 2
+    LIMIT 200
+  `).all();
+    // Map: file path → winning author email (majority owner) or null
+    const fileOwner = new Map();
+    const filesOwnedByAuthor = new Map();
+    for (const file of fileRows) {
+        const filePath = file.file_path;
+        if (!filePath) {
+            fileOwner.set(file.id, null);
+            continue;
+        }
+        let fileLog;
+        try {
+            const result = spawnSync('git', ['log', '--follow', '--format=%ae', '--', filePath], {
+                cwd: repoPath,
+                encoding: 'utf-8',
+            });
+            if (result.status !== 0 || result.error) {
+                fileOwner.set(file.id, null);
+                continue;
+            }
+            fileLog = result.stdout;
+        }
+        catch {
+            fileOwner.set(file.id, null);
+            continue;
+        }
+        const authorCounts = new Map();
+        for (const ae of fileLog.split('\n')) {
+            const e = ae.trim().replace(/^"|"$/g, '');
+            if (!e)
+                continue;
+            authorCounts.set(e, (authorCounts.get(e) ?? 0) + 1);
+        }
+        let totalCommitsOnFile = 0;
+        for (const c of authorCounts.values())
+            totalCommitsOnFile += c;
+        let winner = null;
+        for (const [ae, c] of authorCounts) {
+            if (totalCommitsOnFile > 0 && c / totalCommitsOnFile > 0.5) {
+                winner = ae;
+                break;
+            }
+        }
+        fileOwner.set(file.id, winner);
+        if (winner) {
+            filesOwnedByAuthor.set(winner, (filesOwnedByAuthor.get(winner) ?? 0) + 1);
+        }
+    }
+    // ── Count unowned files ────────────────────────────────────────────────────
+    let unownedFiles = 0;
+    for (const owner of fileOwner.values()) {
+        if (owner === null)
+            unownedFiles++;
+    }
+    // ── Build author stats ─────────────────────────────────────────────────────
+    const authors = [];
+    const botAuthors = [];
+    for (const [email, count] of commitCount) {
+        const recent = recentCommits.get(email) ?? 0;
+        const prior = priorCommits.get(email) ?? 0;
+        let churnTrend;
+        if (recent > prior * 1.2)
+            churnTrend = 'accelerating';
+        else if (recent < prior * 0.8)
+            churnTrend = 'declining';
+        else
+            churnTrend = 'stable';
+        const bot = isBot(email);
+        if (bot)
+            botAuthors.push(email);
+        authors.push({
+            author: email,
+            commitCount: count,
+            filesOwned: filesOwnedByAuthor.get(email) ?? 0,
+            recentCommits: recent,
+            churnTrend,
+            isBot: bot,
+        });
+    }
+    // Sort by filesOwned desc, then commitCount desc
+    authors.sort((a, b) => b.filesOwned - a.filesOwned || b.commitCount - a.commitCount);
+    const topOwners = authors.filter(a => !a.isBot).slice(0, 5);
+    return { authors, topOwners, botAuthors, unownedFiles };
+}
+//# sourceMappingURL=author-analytics.js.map

package/dist/src/graph/author-analytics.js.map

@@ -0,0 +1 @@
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package/dist/src/graph/baseline.d.ts

@@ -0,0 +1,80 @@
+import type Database from 'better-sqlite3';
+export interface BaselineFinding {
+    /** Stable identifier: e.g. "file:src/foo.ts:export:bar" or "community:12:orphan" */
+    key: string;
+    type: 'unreachable_export' | 'isolated_node' | 'ambiguous_edge' | 'bridge_node' | 'surprise' | 'god_node' | 'other';
+    nodeId: string;
+    nodeName: string;
+    filePath: string | null;
+    savedAt: string;
+    /** 16-hex SHA-256 fingerprint for stable deduplication across runs */
+    fingerprint?: string;
+}
+export interface BaselineData {
+    version: 1;
+    savedAt: string;
+    projectPath: string;
+    findings: BaselineFinding[];
+}
+export interface ComparedFinding extends BaselineFinding {
+    introduced: boolean;
+}
+/**
+ * Save the current set of findings as a baseline JSON file.
+ * @param baselinePath - path to write (e.g. .monomind/baseline.json)
+ * @param findings - current findings to persist
+ * @param projectPath - repo path for identification
+ */
+export declare function saveBaseline(baselinePath: string, findings: BaselineFinding[], projectPath: string): void;
+/**
+ * Load an existing baseline file.
+ */
+export declare function loadBaseline(baselinePath: string): BaselineData | null;
+/**
+ * Compare a list of current findings against a baseline.
+ * Returns each finding annotated with introduced:true/false.
+ */
+export declare function compareWithBaseline(currentFindings: BaselineFinding[], baseline: BaselineData | null): ComparedFinding[];
+/**
+ * Extract findings from the database to build a baseline.
+ * Collects: isolated nodes (no edges), nodes with only INFERRED edges,
+ * god nodes (degree > 50).
+ */
+export declare function extractFindingsFromDb(db: Database.Database, projectPath: string): BaselineFinding[];
+/**
+ * Default baseline path relative to a project directory.
+ * If a name is provided, the file is saved as `baseline-{name}.json`.
+ */
+export declare function defaultBaselinePath(projectDir: string, name?: string): string;
+export type TrendDirection = 'improving' | 'declining' | 'stable';
+export interface TrendMetric {
+    metric: string;
+    previous: number;
+    current: number;
+    delta: number;
+    direction: TrendDirection;
+    symbol: '↑' | '↓' | '→';
+}
+export interface TrendReport {
+    metrics: TrendMetric[];
+    overallDirection: TrendDirection;
+}
+/**
+ * Extended baseline data with vital-sign counters.
+ * These fields are optional so existing baseline files remain compatible.
+ */
+export interface BaselineVitals {
+    nodeCount?: number;
+    edgeCount?: number;
+    communityCount?: number;
+    godNodeCount?: number;
+    surpriseCount?: number;
+    hotspotCount?: number;
+    unreachableNodeCount?: number;
+}
+/**
+ * Compute a trend report by comparing two BaselineData snapshots.
+ * Each baseline must carry BaselineVitals fields (nodeCount, edgeCount, …).
+ */
+export declare function computeTrend(before: BaselineData & BaselineVitals, after: BaselineData & BaselineVitals): TrendReport;
+//# sourceMappingURL=baseline.d.ts.map

package/dist/src/graph/baseline.d.ts.map

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package/dist/src/graph/baseline.js

@@ -0,0 +1,272 @@
+import { readFileSync, writeFileSync, existsSync } from 'fs';
+import { join } from 'path';
+import { createHash } from 'crypto';
+function fingerprintFinding(type, ...parts) {
+    return createHash('sha256').update([type, ...parts].join('::')).digest('hex').slice(0, 16);
+}
+/**
+ * Save the current set of findings as a baseline JSON file.
+ * @param baselinePath - path to write (e.g. .monomind/baseline.json)
+ * @param findings - current findings to persist
+ * @param projectPath - repo path for identification
+ */
+export function saveBaseline(baselinePath, findings, projectPath) {
+    const data = {
+        version: 1,
+        savedAt: new Date().toISOString(),
+        projectPath,
+        findings,
+    };
+    writeFileSync(baselinePath, JSON.stringify(data, null, 2), 'utf-8');
+}
+/**
+ * Load an existing baseline file.
+ */
+export function loadBaseline(baselinePath) {
+    if (!existsSync(baselinePath))
+        return null;
+    try {
+        return JSON.parse(readFileSync(baselinePath, 'utf-8'));
+    }
+    catch {
+        return null;
+    }
+}
+/**
+ * Compare a list of current findings against a baseline.
+ * Returns each finding annotated with introduced:true/false.
+ */
+export function compareWithBaseline(currentFindings, baseline) {
+    if (!baseline) {
+        // No baseline — all findings are "introduced"
+        return currentFindings.map(f => ({ ...f, introduced: true }));
+    }
+    // Primary: match by fingerprint (for baselines that have it)
+    const baselineFingerprints = new Set(baseline.findings
+        .filter(f => f.fingerprint)
+        .map(f => f.fingerprint));
+    // Fallback: match by key (for old baselines without fingerprint)
+    const baselineKeys = new Set(baseline.findings.map(f => f.key));
+    return currentFindings.map(f => {
+        if (f.fingerprint && baselineFingerprints.size > 0) {
+            return { ...f, introduced: !baselineFingerprints.has(f.fingerprint) };
+        }
+        return { ...f, introduced: !baselineKeys.has(f.key) };
+    });
+}
+/**
+ * Extract findings from the database to build a baseline.
+ * Collects: isolated nodes (no edges), nodes with only INFERRED edges,
+ * god nodes (degree > 50).
+ */
+export function extractFindingsFromDb(db, projectPath) {
+    const findings = [];
+    // Isolated nodes (no incoming or outgoing edges)
+    const isolated = db.prepare(`
+    SELECT n.id, n.name, n.file_path, n.label
+    FROM nodes n
+    WHERE NOT EXISTS (SELECT 1 FROM edges e WHERE e.source_id = n.id OR e.target_id = n.id)
+    AND n.label IN ('Function', 'Class', 'Method', 'Interface', 'Variable', 'Module', 'File')
+    LIMIT 500
+  `).all();
+    for (const n of isolated) {
+        findings.push({
+            key: `isolated:${n.file_path ?? n.id}:${n.name}`,
+            type: 'isolated_node',
+            nodeId: n.id,
+            nodeName: n.name,
+            filePath: n.file_path,
+            savedAt: new Date().toISOString(),
+            fingerprint: fingerprintFinding('isolated_node', n.file_path ?? '', n.id),
+        });
+    }
+    // God nodes (degree > 50)
+    const gods = db.prepare(`
+    SELECT n.id, n.name, n.file_path,
+           COUNT(DISTINCT e1.id) + COUNT(DISTINCT e2.id) as degree
+    FROM nodes n
+    LEFT JOIN edges e1 ON e1.source_id = n.id
+    LEFT JOIN edges e2 ON e2.target_id = n.id
+    GROUP BY n.id
+    HAVING degree > 50
+    ORDER BY degree DESC
+    LIMIT 100
+  `).all();
+    for (const n of gods) {
+        findings.push({
+            key: `god_node:${n.file_path ?? n.id}:${n.name}`,
+            type: 'god_node',
+            nodeId: n.id,
+            nodeName: n.name,
+            filePath: n.file_path,
+            savedAt: new Date().toISOString(),
+            fingerprint: fingerprintFinding('god_node', n.file_path ?? '', n.id),
+        });
+    }
+    // Surprise edges: non-EXTRACTED confidence (cross-community low-confidence edges)
+    const surprises = db.prepare(`
+    SELECT DISTINCT e.id as edge_id, e.source_id, e.target_id, e.confidence,
+           n.name as src_name, n.file_path as src_file
+    FROM edges e
+    JOIN nodes n ON n.id = e.source_id
+    WHERE e.confidence != 'EXTRACTED'
+    LIMIT 200
+  `).all();
+    for (const e of surprises) {
+        findings.push({
+            key: `surprise:${e.source_id}:${e.target_id}`,
+            type: 'surprise',
+            nodeId: e.source_id,
+            nodeName: e.src_name,
+            filePath: e.src_file,
+            savedAt: new Date().toISOString(),
+            fingerprint: fingerprintFinding('surprise', e.source_id, e.target_id),
+        });
+    }
+    // Bridge nodes: nodes whose edges span more than one community_id
+    const bridges = db.prepare(`
+    SELECT n.id, n.name, n.file_path
+    FROM nodes n
+    WHERE n.community_id IS NOT NULL
+    AND (
+      SELECT COUNT(DISTINCT n_tgt.community_id)
+      FROM edges e_out
+      JOIN nodes n_tgt ON n_tgt.id = e_out.target_id
+      WHERE e_out.source_id = n.id AND n_tgt.community_id != n.community_id
+    ) +
+    (
+      SELECT COUNT(DISTINCT n_src.community_id)
+      FROM edges e_in
+      JOIN nodes n_src ON n_src.id = e_in.source_id
+      WHERE e_in.target_id = n.id AND n_src.community_id != n.community_id
+    ) >= 2
+    LIMIT 100
+  `).all();
+    for (const n of bridges) {
+        findings.push({
+            key: `bridge_node:${n.file_path ?? n.id}:${n.name}`,
+            type: 'bridge_node',
+            nodeId: n.id,
+            nodeName: n.name,
+            filePath: n.file_path,
+            savedAt: new Date().toISOString(),
+            fingerprint: fingerprintFinding('bridge_node', n.file_path ?? '', n.id),
+        });
+    }
+    // Unreachable exports: exported nodes with no incoming edges
+    const unreachableExports = db.prepare(`
+    SELECT n.id, n.name, n.file_path
+    FROM nodes n
+    WHERE n.is_exported = 1
+    AND n.label IN ('Function', 'Class', 'Method', 'Interface', 'Variable')
+    AND NOT EXISTS (SELECT 1 FROM edges e WHERE e.target_id = n.id)
+    LIMIT 300
+  `).all();
+    for (const n of unreachableExports) {
+        findings.push({
+            key: `unreachable_export:${n.file_path ?? n.id}:${n.name}`,
+            type: 'unreachable_export',
+            nodeId: n.id,
+            nodeName: n.name,
+            filePath: n.file_path,
+            savedAt: new Date().toISOString(),
+            fingerprint: fingerprintFinding('unreachable_export', n.file_path ?? '', n.id),
+        });
+    }
+    // Ambiguous edges: edges with AMBIGUOUS confidence
+    const ambiguousEdges = db.prepare(`
+    SELECT DISTINCT e.id as edge_id, e.source_id, e.target_id,
+           n.name as src_name, n.file_path as src_file
+    FROM edges e
+    JOIN nodes n ON n.id = e.source_id
+    WHERE e.confidence = 'AMBIGUOUS'
+    LIMIT 200
+  `).all();
+    for (const e of ambiguousEdges) {
+        findings.push({
+            key: `ambiguous_edge:${e.source_id}:${e.target_id}`,
+            type: 'ambiguous_edge',
+            nodeId: e.source_id,
+            nodeName: e.src_name,
+            filePath: e.src_file,
+            savedAt: new Date().toISOString(),
+            fingerprint: fingerprintFinding('ambiguous_edge', e.source_id, e.target_id),
+        });
+    }
+    return findings;
+}
+/**
+ * Default baseline path relative to a project directory.
+ * If a name is provided, the file is saved as `baseline-{name}.json`.
+ */
+export function defaultBaselinePath(projectDir, name) {
+    const filename = name ? `baseline-${name}.json` : 'baseline.json';
+    return join(projectDir, '.monomind', filename);
+}
+/**
+ * Domain-aware polarity for each metric.
+ * true  = higher value is better (improving)
+ * false = lower value is better (improving)
+ */
+const METRIC_HIGHER_IS_BETTER = {
+    nodeCount: true,
+    edgeCount: false, // neutral; treated as stable unless large change
+    communityCount: true,
+    godNodeCount: false,
+    surpriseCount: false,
+    hotspotCount: false,
+    unreachableNodeCount: false,
+};
+function trendDirection(metric, delta) {
+    if (delta === 0)
+        return { direction: 'stable', symbol: '→' };
+    // edgeCount is neutral — always stable regardless of direction
+    if (metric === 'edgeCount')
+        return { direction: 'stable', symbol: '→' };
+    const higherIsBetter = METRIC_HIGHER_IS_BETTER[metric] ?? true;
+    if (delta > 0) {
+        return higherIsBetter
+            ? { direction: 'improving', symbol: '↑' }
+            : { direction: 'declining', symbol: '↑' };
+    }
+    // delta < 0
+    return higherIsBetter
+        ? { direction: 'declining', symbol: '↓' }
+        : { direction: 'improving', symbol: '↓' };
+}
+/**
+ * Compute a trend report by comparing two BaselineData snapshots.
+ * Each baseline must carry BaselineVitals fields (nodeCount, edgeCount, …).
+ */
+export function computeTrend(before, after) {
+    const metricKeys = [
+        'nodeCount',
+        'edgeCount',
+        'communityCount',
+        'godNodeCount',
+        'surpriseCount',
+        'hotspotCount',
+        'unreachableNodeCount',
+    ];
+    const metrics = [];
+    for (const key of metricKeys) {
+        const prev = before[key] ?? 0;
+        const curr = after[key] ?? 0;
+        const delta = curr - prev;
+        const { direction, symbol } = trendDirection(key, delta);
+        metrics.push({ metric: key, previous: prev, current: curr, delta, direction, symbol });
+    }
+    // Overall direction: majority vote (improving/declining/stable)
+    const counts = { improving: 0, declining: 0, stable: 0 };
+    for (const m of metrics)
+        counts[m.direction]++;
+    let overallDirection = 'stable';
+    if (counts.improving > counts.declining && counts.improving > counts.stable) {
+        overallDirection = 'improving';
+    }
+    else if (counts.declining > counts.improving && counts.declining > counts.stable) {
+        overallDirection = 'declining';
+    }
+    return { metrics, overallDirection };
+}
+//# sourceMappingURL=baseline.js.map

package/dist/src/graph/baseline.js.map

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package/dist/src/graph/clone-detector.d.ts

@@ -0,0 +1,15 @@
+import type { MonographDb } from '../storage/db.js';
+export interface ClonePair {
+    fileA: string;
+    fileB: string;
+    similarity: number;
+    cloneType: 'exact' | 'renamed' | 'structural';
+    tokenCount: number;
+}
+export interface CloneDetectionResult {
+    pairs: ClonePair[];
+    totalFiles: number;
+    cloneRatio: number;
+}
+export declare function detectClones(db: MonographDb, minSimilarity?: number, minTokens?: number): CloneDetectionResult;
+//# sourceMappingURL=clone-detector.d.ts.map

package/dist/src/graph/clone-detector.d.ts.map

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