@monoes/memory 1.0.14 → 1.0.16

package/LICENSE

@@ -0,0 +1,191 @@
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package/README.md

@@ -8,9 +8,9 @@
 [![license](https://img.shields.io/npm/l/@monoes/memory.svg?style=flat-square)](https://github.com/monoes/monomind/blob/main/LICENSE)
 [![node](https://img.shields.io/badge/node-%3E%3D20-blue?style=flat-square)](https://nodejs.org)
 
-**Persistent memory backends for Monomind agents** — SQLite (native or WASM) key-value storage with brute-force cosine vector search, a standalone pure-JS HNSW index, JSONL episodic memory, and a chunked knowledge store.
+**Persistent memory backends for Monomind agents** — SQLite in WAL journal mode (`PRAGMA journal_mode = WAL`, schema v3.0.0) key-value storage with dense ONNX ModernBERT 768d + Okapi BM25 RRF hybrid search, surface query routing, Open Knowledge Format (OKF) transfer, Cognee-style knowledge graph triplets, and EWC pattern consolidation.
 
-> Part of the [Monomind](https://github.com/monoes/monomind) ecosystem. The only hard dependency is `sql.js` (WASM); `better-sqlite3` is optional and loaded dynamically when installed. LanceDB support was removed — SQLite is the only backend now.
+> Part of the [Monomind](https://github.com/monoes/monomind) ecosystem. The embedded storage layer uses `better-sqlite3` with `sql.js` (WASM zero-compile fallback).
 
 ## Install
 
@@ -21,101 +21,66 @@ npm install @monoes/memory
 npm install better-sqlite3
 ```
 
-## What's in the box
+## Core Architecture & Schema v3.0.0
 
-| Export | What it does |
-|---|---|
-| `UnifiedMemoryService` | High-level store/get/search facade backed by `SQLiteBackend` |
-| `SQLiteBackend` / `SqlJsBackend` | Structured key-value memory with brute-force cosine vector search (native SQLite or zero-compile WASM) |
-| `HNSWIndex` | Pure-JS approximate nearest-neighbor index with quantization support — standalone, not wired into `SQLiteBackend.search()` (see the honesty review's HNSW growth plan for why and when to change that) |
-| `EpisodicStore` | JSON-lines episodic memory — accumulates agent runs into summarized episodes |
-| `chunkDocument`, `KnowledgeStore`, `KnowledgeRetriever` | Document chunking + retrieval for knowledge bases |
-| `QueryBuilder` / `query()` | Fluent query construction (namespace, tags, threshold, sort) |
-| `CacheManager`, `TieredCacheManager` | LRU caching with size/TTL limits |
-| `createDatabase`, `getPlatformInfo` | Platform-aware provider selection (better-sqlite3 → sql.js → JSON fallback) |
-| `SwarmCheckpointer` | Persist/restore swarm agent state snapshots |
-| `MemoryMigrator` | Import from SQLite, JSON, or Markdown sources |
-| `PromptVersionStore`, `ControllerRegistry` | Prompt version history; init-level controller registry |
-
-Note: Monomind's live hook/routing hot path uses plain JSON pattern files and
-keyword-based episodic recall — the vector backends here are opt-in, used when
-an embedding generator and the optional native dependencies are provided.
+### Schema Architecture & Storage Engine
+- **Storage Driver**: Operates over SQLite with WAL mode (`PRAGMA journal_mode = WAL`) using `better-sqlite3` with a WASM `sql.js` fallback.
+- **Dual Schema Support**:
+  - Standalone `@monoes/memory` core schema ([`packages/@monomind/memory/src/sql-schema.ts:28`](packages/@monomind/memory/src/sql-schema.ts#L28)): `SCHEMA_VERSION = 2` managing **4 tables** (`memory_entries`, `memory_embeddings`, `memory_entry_tags`, `agent_reads`).
+  - CLI project memory schema ([`packages/@monomind/cli/src/memory/memory-schema.ts:15`](packages/@monomind/cli/src/memory/memory-schema.ts#L15)): Schema version `3.0.0` managing **9 tables** (`memory_entries`, `patterns`, `pattern_history`, `trajectories`, `trajectory_steps`, `migration_state`, `sessions`, `vector_indexes`, `metadata`).
 
-## Quick start — key-value memory
+## Hybrid Search: ONNX ModernBERT 768d + BM25 RRF
 
-```typescript
-import { SQLiteBackend } from '@monoes/memory';
+Retrieval uses a dual-arm hybrid search architecture combined with Reciprocal Rank Fusion (RRF):
 
-const backend = new SQLiteBackend({ databasePath: './data/memory.db' });
-await backend.initialize();
+1. **Dense Vector Search**:
+   - Model: `Alibaba-NLP/gte-modernbert-base` (768 dimensions).
+   - Embedding Pipeline: `@xenova/transformers` ONNX feature extraction.
+   - Acceleration: Standalone pure-JS `HNSWIndex` (`dimensions=768`, `M=16`, `efConstruction=200`, `metric='cosine'`).
+2. **Lexical Arm (In-Process Okapi BM25)**:
+   - Parameters: $k_1 = 1.2$, $b = 0.75$.
+   - Tokenizer: Exact parity with the evaluation harness (`text-tokens.ts`).
+   - Live-Only Indexing: Built dynamically over live chunks with warning thresholds at 50,000 chunks (`LIVE_CHUNK_WARN_THRESHOLD`) and persistent review at 1,000,000 chunks (`SCALING_REVIEW_CHUNKS`).
+3. **Reciprocal Rank Fusion (RRF)**:
+   - Fuses ranked candidate lists using adaptive constant $k = \max(30, \min(60, 20 + 2 \times \text{top\_k}))$:
+     $$\text{Score}(d) = \sum_{m} \frac{1}{\text{rrf\_k} + \text{rank}_m + 1} \times (0.75 + 0.5 \times \text{importance})$$
 
-await backend.store({
-  id: 'mem-1',
-  key: 'user-preference',
-  content: 'User prefers dark mode',
-  type: 'semantic',
-  namespace: 'preferences',
-  tags: ['ui'],
-});
+## Surface Query Router
 
-const entry = await backend.getByKey('preferences', 'user-preference');
-```
+The `QueryRouter` (`query-router.ts`) evaluates queries across 4 target surfaces: `chunks` (prior 0.5), `kg` (wt 2), `rules` (wt 2), and `memory` (wt 2):
+- **Negation Gate**: Uses a 20-character pre-match window (`NEGATION_RE`) to bypass negated query phrases.
+- **Confidence Gate**: Requires top surface score $\ge 2 \times$ runner-up score; low-confidence queries query all surfaces and fuse results.
+- **Telemetry Persistence**: Cross-process misroutes are recorded to `.monomind/metrics/route-overrides.json`.
 
-## Vector search
+## Open Knowledge Format (OKF) Bundles
 
-```typescript
-import { UnifiedMemoryService } from '@monoes/memory';
+Supports document and memory export/import via Open Knowledge Format (OKF) Markdown files with YAML frontmatter headers:
+- **Document OKF**: Exported via `exportToOKF()` with frontmatter (`type: Document`, `title`, `description`, `resource`, `tags`, `timestamp`, `contentHash`, `chunkCount`) and an `index.md` manifest.
+- **Memory Transfer OKF**: CLI commands `monomind memory export` and `import` export/restore key-value memory entries across namespace directory trees.
 
-// Backed by SQLiteBackend — brute-force cosine similarity, no extra install
-const memory = new UnifiedMemoryService({
-  persistencePath: './data/memory.db',
-  dimensions: 1536,
-  embeddingGenerator: async (text) => myEmbedder.embed(text),
-});
-await memory.initialize();
-```
-
-Or use the standalone pure-JS index directly:
-
-```typescript
-import { HNSWIndex } from '@monoes/memory';
-
-const index = new HNSWIndex({ dimensions: 1536, M: 16, efConstruction: 200, metric: 'cosine' });
-await index.addPoint('mem-1', new Float32Array(embedding));
-const results = await index.search(queryVector, 10);
-// [{ id: 'mem-1', distance: 0.05 }, ...]
-```
+## EWC Pattern Consolidation & SONA Router
 
-## Episodic memory
+- **EWC Consolidation** (`ewc-consolidation.ts`): Applies Elastic Weight Consolidation using an EMA-updated Fisher information matrix (`computeFisherMatrix`) persisted in `.swarm/ewc-fisher.json` to prevent catastrophic forgetting during pattern updates.
+- **SONA Router** (`sona-optimizer.ts`): Extracts routing patterns from `hooksTrajectoryEnd` events into `.swarm/sona-patterns.json`.
 
-```typescript
-import { EpisodicStore } from '@monoes/memory';
+## Exported Components
 
-const store = new EpisodicStore({ filePath: './data/episodes.jsonl', maxRunsPerEpisode: 20 });
-// Accumulates agent runs into episodes, one JSON object per line
-```
-
-## Query builder
-
-```typescript
-import { query } from '@monoes/memory';
-
-const q = query()
-  .semantic('authentication patterns')
-  .inNamespace('security')
-  .withTags(['auth'])
-  .threshold(0.7)
-  .limit(20)
-  .sortByNewest()
-  .build();
-```
+| Export | What it does |
+|---|---|
+| `SQLiteBackend` / `SqlJsBackend` | Structured key-value storage in SQLite WAL mode (native + WASM fallback) |
+| `HNSWIndex` | Standalone pure-JS approximate nearest-neighbor index (`768d`) |
+| `chunkDocument`, `KnowledgeStore`, `KnowledgeRetriever` | Document chunking + retrieval pipeline |
+| `QueryBuilder` / `query()` | Fluent query construction |
+| `CacheManager` | In-memory LRU caching with size/TTL limits |
+| `SwarmCheckpointer` | Persist/restore swarm agent state snapshots |
+| `MemoryMigrator` | Import from SQLite, JSON, or Markdown sources |
+| `PromptVersionStore` | Prompt version history & prompt experiment tracking |
 
-## Cross-platform notes
+## Cross-Platform Notes
 
-`createDatabase()` picks the best available provider per platform:
-`better-sqlite3` (native, fastest) → `sql.js` (WASM, zero compilation, works
-everywhere including Windows without a toolchain) → JSON file fallback. See
-`docs/CROSS_PLATFORM.md` and `docs/WINDOWS_SUPPORT.md`.
+The memory storage engine selects the best available SQLite driver per platform:
+`better-sqlite3` (native, fastest) with automatic fallback to `sql.js` (WASM, zero compilation, works
+everywhere including Windows without a toolchain).
 
 ## Links
 
@@ -126,3 +91,4 @@ everywhere including Windows without a toolchain) → JSON file fallback. See
 ## License
 
 MIT
+

package/dist/cache-manager.d.ts

@@ -94,41 +94,5 @@ export declare class CacheManager<T = MemoryEntry> extends EventEmitter {
     private startCleanupTimer;
     private cleanupExpired;
 }
-/**
- * Multi-layer cache with L1 (memory) and L2 (storage) tiers
- */
-export declare class TieredCacheManager<T = MemoryEntry> extends EventEmitter {
-    private l1Cache;
-    private l2Loader;
-    private l2Writer;
-    constructor(l1Config?: Partial<CacheConfig>, l2Options?: {
-        loader: (key: string) => Promise<T | null>;
-        writer?: (key: string, value: T) => Promise<void>;
-    });
-    /**
-     * Get from tiered cache
-     */
-    get(key: string): Promise<T | null>;
-    /**
-     * Set in tiered cache
-     */
-    set(key: string, value: T, ttl?: number): Promise<void>;
-    /**
-     * Delete from tiered cache
-     */
-    delete(key: string): boolean;
-    /**
-     * Get L1 cache statistics
-     */
-    getStats(): CacheStats;
-    /**
-     * Clear L1 cache
-     */
-    clear(): void;
-    /**
-     * Shutdown tiered cache
-     */
-    shutdown(): void;
-}
 export default CacheManager;
 //# sourceMappingURL=cache-manager.d.ts.map

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package/dist/cache-manager.js

@@ -332,83 +332,5 @@ export class CacheManager extends EventEmitter {
         }
     }
 }
-/**
- * Multi-layer cache with L1 (memory) and L2 (storage) tiers
- */
-export class TieredCacheManager extends EventEmitter {
-    l1Cache;
-    l2Loader = null;
-    l2Writer = null;
-    constructor(l1Config = {}, l2Options) {
-        super();
-        this.l1Cache = new CacheManager(l1Config);
-        if (l2Options) {
-            this.l2Loader = l2Options.loader;
-            this.l2Writer = l2Options.writer ?? null;
-        }
-        // Forward L1 events
-        this.l1Cache.on('cache:hit', (data) => this.emit('l1:hit', data));
-        this.l1Cache.on('cache:miss', (data) => this.emit('l1:miss', data));
-        this.l1Cache.on('cache:eviction', (data) => this.emit('l1:eviction', data));
-    }
-    /**
-     * Get from tiered cache
-     */
-    async get(key) {
-        // Try L1 first
-        const l1Result = this.l1Cache.get(key);
-        if (l1Result !== null) {
-            return l1Result;
-        }
-        // Try L2 if available
-        if (this.l2Loader) {
-            const l2Result = await this.l2Loader(key);
-            if (l2Result !== null) {
-                // Promote to L1
-                this.l1Cache.set(key, l2Result);
-                this.emit('l2:hit', { key });
-                return l2Result;
-            }
-            this.emit('l2:miss', { key });
-        }
-        return null;
-    }
-    /**
-     * Set in tiered cache
-     */
-    async set(key, value, ttl) {
-        // Write to L1
-        this.l1Cache.set(key, value, ttl);
-        // Write-through to L2 if configured
-        if (this.l2Writer) {
-            await this.l2Writer(key, value);
-            this.emit('l2:write', { key });
-        }
-    }
-    /**
-     * Delete from tiered cache
-     */
-    delete(key) {
-        return this.l1Cache.delete(key);
-    }
-    /**
-     * Get L1 cache statistics
-     */
-    getStats() {
-        return this.l1Cache.getStats();
-    }
-    /**
-     * Clear L1 cache
-     */
-    clear() {
-        this.l1Cache.clear();
-    }
-    /**
-     * Shutdown tiered cache
-     */
-    shutdown() {
-        this.l1Cache.shutdown();
-    }
-}
 export default CacheManager;
 //# sourceMappingURL=cache-manager.js.map

package/dist/cache-manager.js.map

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package/dist/checkpointer.d.ts.map

@@ -1 +1 @@
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