npm - @milaboratories/miplots4 - Versions diffs - 1.0.176 → 1.0.178 - Mend

@milaboratories/miplots4 1.0.176 → 1.0.178

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package/dist/heatmap/fillCellsData.js.map CHANGED Viewed

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1	- {"version":3,"file":"fillCellsData.js","sources":["../../src/heatmap/fillCellsData.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted, sum } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\nimport { getFacetOrGroupKey } from '../utils/getFacetOrGroupKey';\nimport type { BubbleSettingsImpl } from '../bubble/BubbleSettingsImpl';\nimport { getFacetLabels } from '../discrete/utils/getFacetLabels';\nimport { getFacetStringKey } from '../discrete/utils/getFacetStringKey';\n\nexport type Cell<T extends string> = {\n isCell: true;\n idx: number;\n id: string;\n value: Record<T, DataValue>;\n normalizedValue: Record<T, DataValue>;\n x: DataValue;\n y: DataValue;\n};\n\nexport type GroupedCellsData<T extends string> = {\n meta: {\n valueSources: T[]; // dataSource for heatmap, color and size for bubble - main data for every cell\n\n facetKeys: string[];\n xGroupKeys: string[];\n yGroupKeys: string[];\n\n xKeys: string[];\n yKeys: string[];\n xKeysByGroups: Record<string, string[]>;\n yKeysByGroups: Record<string, string[]>;\n\n // for titles, if facet by more 1 columns title has several values separated by commas\n facetKeyValues: Record<string, string[]>;\n xGroupKeyValues: Record<string, string[]>;\n yGroupKeyValues: Record<string, string[]>;\n\n xLabels: Record<string, string>;\n yLabels: Record<string, string>;\n xGroupLabels: Record<string, string>;\n yGroupLabels: Record<string, string>;\n\n valueExtent: Record<T, [number, number]>; // for color/size scales\n // data for labels, annotations and dendrograms\n xDataByKeys: Record<string, Record<string, DataValue>>;\n yDataByKeys: Record<string, Record<string, DataValue>>;\n };\n //facet groups\n facets: Record<\n string,\n {\n // axis keys\n xKeys: string[];\n yKeys: string[];\n // axis keys grouped by group keys from meta\n xKeysByGroups: Record<string, string[]>;\n yKeysByGroups: Record<string, string[]>;\n // cells grouped by X, then by Y\n cells: Record<string, Record<string, Cell<T>>>;\n }\n >;\n};\n\nfunction normalizeByStd(values: number[]) {\n const stdValue = deviation(values);\n const meanValue = mean(values);\n\n if (stdValue === undefined \|\| meanValue === undefined \|\| stdValue === 0) {\n return (v: number) => v;\n }\n return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n const meanValue = mean(values);\n const [min, max] = extent(values);\n if (meanValue === undefined \|\| min === undefined \|\| max === undefined \|\| max === min) {\n return (v: number) => v;\n }\n return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n if (method === 'standardScaling') {\n return normalizeByStd(values);\n }\n if (method === 'meanNormalization') {\n return normalizeByMinMax(values);\n }\n return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n switch (method) {\n case 'max': {\n let res = values[0];\n for (const v of values) {\n res = Math.max(res, v);\n }\n return res;\n }\n case 'min': {\n let res = values[0];\n for (const v of values) {\n res = Math.min(res, v);\n }\n return res;\n }\n case 'median': {\n const valuesSorted = values.sort((a, b) => a - b);\n return quantileSorted(valuesSorted, 0.5) as number;\n }\n case 'mean': {\n return mean(values) ?? values[0];\n }\n case 'sum': {\n return sum(values) as number;\n }\n default: exhaustive(method, `Unknown aggregation function ${method}`);\n }\n}\nfunction aggregateString(values: string[]) {\n const list = [...new Set(values)].sort();\n if (list.length > 3) {\n return [...list.slice(0, 3), '...'].join(', ');\n }\n return list.join(', ');\n}\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n if (!keysLists.length) {\n return [];\n }\n let result: string[][] = [[]];\n keysLists.forEach(keys => {\n const nextResult: string[][] = [];\n keys.forEach(key => {\n nextResult.push(...result.map(resultItem => [...resultItem, key]));\n });\n result = nextResult;\n });\n return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' \| 'desc', labels: Record<string, string> = {}) => {\n return arr.sort((a, b) => direction === 'asc'\n ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n );\n};\nfunction applyAggregation<T extends string>(\n result: GroupedCellsData<T>,\n aggregation: HeatmapSettingsImpl['aggregation'],\n additionalDataColumnsX: string[],\n additionalDataColumnsY: string[],\n annotations: HeatmapSettingsImpl['annotations']\n) {\n if (aggregation.x \|\| aggregation.y) {\n const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n r[key] = [Infinity, -Infinity] as [number, number];\n return r;\n }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n result.meta.facetKeys.forEach(facetKey => {\n const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n const xNewKeys = Object.keys(xGroups);\n const yNewKeys = Object.keys(yGroups);\n\n for (const xGroupKey of xNewKeys) {\n for (const yGroupKey of yNewKeys) {\n // collect values for aggregation to arrays\n const valuesBySources: Record<T, number[]> = result.meta.valueSources.reduce((r, v) => {\n r[v] = [];\n return r;\n }, {} as Record<T, number[]>);\n xGroups[xGroupKey].forEach((xKey) => {\n yGroups[yGroupKey].forEach((yKey) => {\n for (const valueSource of result.meta.valueSources) {\n const cellValue = cells[xKey]?.[yKey]?.value?.[valueSource];\n if (cellValue !== undefined) {\n valuesBySources[valueSource].push(cellValue as number);\n }\n }\n delete cells[xKey]?.[yKey];\n });\n });\n // create new cells with aggregated values\n for (const valueSource of result.meta.valueSources) {\n const values = valuesBySources[valueSource];\n if (values.length > 0) {\n const value = aggregateNumeric(aggregation.method, values);\n if (!result.facets[facetKey].cells[xGroupKey]) {\n result.facets[facetKey].cells[xGroupKey] = {};\n }\n if (!result.facets[facetKey].cells[xGroupKey][yGroupKey]) {\n result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n isCell: true,\n idx: 0,\n id: `${xGroupKey}_${yGroupKey}`,\n x: xGroupKey,\n y: yGroupKey,\n value: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n normalizedValue: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n };\n }\n const cell = result.facets[facetKey].cells[xGroupKey][yGroupKey];\n cell.value[valueSource] = value;\n cell.normalizedValue[valueSource] = value;\n\n valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n }\n }\n }\n }\n // add aggregated values for X annotations\n if (aggregation.x) {\n xNewKeys.forEach(xGroupKey => {\n additionalDataColumnsX.forEach(columnKey => {\n const annotation = annotations.find((v) => v.valueColumn.value === columnKey \|\| v.valueColumn.valueLabels === columnKey);\n if (!annotation) {\n return;\n }\n const values: DataValue[] = [];\n xGroups[xGroupKey].forEach((xKey) => {\n values.push(result.meta.xDataByKeys[columnKey][xKey]);\n delete result.meta.xDataByKeys[columnKey][xKey];\n });\n const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n });\n });\n }\n // add aggregated values for Y annotations\n if (aggregation.y) {\n additionalDataColumnsY.forEach(columnKey => {\n result.meta.yDataByKeys[columnKey] = {};\n });\n yNewKeys.forEach(yGroupKey => {\n additionalDataColumnsY.forEach(columnKey => {\n const annotation = annotations.find((v) => v.valueColumn.value === columnKey \|\| v.valueColumn.valueLabels === columnKey);\n if (!annotation) {\n return;\n }\n const values: DataValue[] = [];\n yGroups[yGroupKey].forEach((yKey) => {\n values.push(result.meta.yDataByKeys[columnKey][yKey]);\n delete result.meta.yDataByKeys[columnKey][yKey];\n });\n const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n });\n });\n }\n // erase grouping - we aggregated by them and now there is no grouping in the chart;\n // replace axis keys with group keys - now group keys are new axis keys\n if (aggregation.x) {\n result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n result.meta.xLabels = result.meta.xGroupLabels;\n result.meta.xGroupKeys = ['null'];\n result.meta.xGroupKeyValues = { null: ['null'] };\n }\n if (aggregation.y) {\n result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n result.meta.yLabels = result.meta.yGroupLabels;\n result.meta.yGroupKeys = ['null'];\n result.meta.yGroupKeyValues = { null: ['null'] };\n }\n });\n result.meta.valueExtent = valueExtent;\n }\n}\n\nfunction updateValueExtent<T extends string>(result: GroupedCellsData<T>, cell: Cell<T>) {\n for (const valueSource of result.meta.valueSources) {\n result.meta.valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][0]);\n result.meta.valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][1]);\n }\n\n}\nfunction applyNormalization<T extends string>(\n result: GroupedCellsData<T>,\n normalizationBySources: Record<T, HeatmapSettingsImpl['normalization']>,\n) {\n if (Object.values(normalizationBySources).length) {\n const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n if (normalizationBySources[key]) {\n r[key] = [Infinity, -Infinity] as [number, number];\n }\n return r;\n }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n result.meta.facetKeys.forEach(facetKey => {\n const { xKeys, yKeys, cells } = result.facets[facetKey];\n\n for (const valueSource of result.meta.valueSources) {\n const normalization = normalizationBySources[valueSource];\n if (!normalization) {\n continue;\n }\n const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n const cellGetter = normalization.direction === 'row'\n ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n groupKeys.forEach((groupKey) => {\n const values: number[] = [];\n cellKeys.forEach((cellKey) => {\n const v = cellGetter(cellKey, groupKey)?.value?.[valueSource];\n if (v !== undefined) {\n values.push(v as number);\n }\n });\n const normalize = getNormalizationFn(normalization.method, values);\n cellKeys.forEach((cellKey) => {\n const cell = cellGetter(cellKey, groupKey);\n if (cell !== undefined) {\n cell.normalizedValue[valueSource] = normalize(cell.value?.[valueSource] as number);\n valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n }\n });\n });\n }\n\n });\n result.meta.valueExtent = {...result.meta.valueExtent, valueExtent};\n }\n}\n\nexport function fillCellsData<T extends string>(\n result: GroupedCellsData<T>,\n data: DataFrame,\n xColumn: ColumnName,\n yColumn: ColumnName,\n valueColumns: Record<string, ColumnName>,\n facetBy: ColumnName[],\n xGroupBy: ColumnName[],\n yGroupBy: ColumnName[],\n facetSettings: HeatmapSettingsImpl['facetSettings'],\n annotations: HeatmapSettingsImpl['annotations'],\n dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n normalizationBySource: Record<T, HeatmapSettingsImpl['normalization']>, // separated for color and size for example\n NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n keysOrder: HeatmapSettingsImpl['keysOrder'],\n xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'] \| BubbleSettingsImpl['chartSettings']['xAxis'],\n yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'] \| BubbleSettingsImpl['chartSettings']['yAxis'],\n aggregation: HeatmapSettingsImpl['aggregation'],\n) {\n const facetKeysLists = facetBy.length\n ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n : [['null']];\n\n const xGroupKeysLists = xGroupBy.length\n ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n : [['null']];\n const yGroupKeysLists = yGroupBy.length\n ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n : [['null']];\n let facetKeysCombinations = getKeysCombinations(facetKeysLists);\n const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n if (facetSettings?.order?.length) {\n facetKeysCombinations = facetKeysCombinations.filter(keys => facetSettings.order?.includes(getFacetStringKey(keys)));\n }\n const facetKeys = facetKeysCombinations.map(getFacetOrGroupKey);\n const facetKeysSet = new Set(facetKeys);\n const xGroupKeys = xGroupKeysCombinations.map(getFacetOrGroupKey);\n const yGroupKeys = yGroupKeysCombinations.map(getFacetOrGroupKey);\n\n result.meta.facetKeys = facetKeys;\n result.meta.xGroupKeys = xGroupKeys;\n result.meta.yGroupKeys = yGroupKeys;\n\n const facetLabels = getFacetLabels(data, facetBy, facetKeys, facetKeysCombinations);\n result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key) => {\n res[key] = facetLabels[key];\n return res;\n }, {});\n\n result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = xGroupKeysCombinations[index];\n return res;\n }, {});\n result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = yGroupKeysCombinations[index];\n return res;\n }, {});\n\n const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n for (let i = 0; i < data.rowsCount; i++) {\n const facetKey = getFacetOrGroupKey(facetBy.map(column => data.getColumnValue(column.value, i)));\n if (!facetKeysSet.has(facetKey)) {\n continue;\n }\n const xGroupKey = getFacetOrGroupKey(xGroupBy.map(column => data.getColumnValue(column.value, i)));\n const yGroupKey = getFacetOrGroupKey(yGroupBy.map(column => data.getColumnValue(column.value, i)));\n const xGroupLabel = xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n const yGroupLabel = yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n const x = String(data.getColumnValue(xColumn.value, i));\n const y = String(data.getColumnValue(yColumn.value, i));\n\n const values = result.meta.valueSources.reduce((r, key) => {\n r[key] = (data.getColumnValue(valueColumns[key].value, i) ?? NAValueAs) as number \| null;\n return r;\n }, {} as Record<string, DataValue>);\n\n if (x === 'null' \|\| y === 'null' \|\| Object.values(values).every(v => v === null)) {\n continue;\n }\n\n if (!result.facets[facetKey]) {\n result.facets[facetKey] = {\n xKeys: [],\n yKeys: [],\n xKeysByGroups: {},\n yKeysByGroups: {},\n cells: {},\n };\n }\n if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n }\n if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n }\n result.facets[facetKey].xKeys.push(x);\n result.facets[facetKey].yKeys.push(y);\n result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n if (!result.facets[facetKey].cells[x]) {\n result.facets[facetKey].cells[x] = {};\n }\n\n for (const valueSource of result.meta.valueSources) {\n if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value[valueSource] !== values[valueSource]) {\n throw Error(`More than 1 value for x=${x}, y=${y}`);\n }\n }\n\n const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n throw Error(`More than 1 x-label value for x=${x}`);\n }\n const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n throw Error(`More than 1 y-label value for y=${y}`);\n }\n result.meta.xLabels[x] = String(xLabelsSourceValue);\n result.meta.yLabels[y] = String(yLabelsSourceValue);\n // data for labels, annotations and dendrograms by X\n additionalDataColumnsX.forEach(columnKey => {\n const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n if (!isAddedColumn) {\n result.meta.xDataByKeys[columnKey] = {};\n }\n if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n }\n if (!isAddedValue) {\n result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n }\n });\n // data for labels, annotations and dendrograms by Y\n additionalDataColumnsY.forEach(columnKey => {\n const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n if (!isAddedColumn) {\n result.meta.yDataByKeys[columnKey] = {};\n }\n if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n }\n if (!isAddedValue) {\n result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n }\n });\n result.facets[facetKey].cells[x][y] = {\n isCell: true,\n idx: i,\n id: `${x}_${y}`,\n x,\n y,\n value: values,\n normalizedValue: values,\n };\n\n updateValueExtent(result, result.facets[facetKey].cells[x][y]);\n }\n\n result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n // make uniq x, y, x-group and y-group keys\n result.meta.facetKeys.forEach(facetKey => {\n const facet = result.facets[facetKey];\n const uniqueXKeys = lodash.uniq(facet.xKeys);\n const uniqueYKeys = lodash.uniq(facet.yKeys);\n facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n xGroupKeys.forEach(xGroupKey => {\n result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n facet.xKeys,\n result.facets[facetKey].xKeysByGroups[xGroupKey]\n );\n });\n yGroupKeys.forEach(yGroupKey => {\n result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n facet.yKeys,\n result.facets[facetKey].yKeysByGroups[yGroupKey]\n );\n });\n });\n\n applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n applyNormalization(result, normalizationBySource);\n\n // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n const existingXKeys = sortByLabels(lodash.uniq(\n lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n ), xAxis.sorting, result.meta.xLabels);\n res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n return res;\n }, {});\n result.meta.xKeys = result.meta.xGroupKeys.reduce((res: string[], xGroupKey: string) => {\n res = res.concat(result.meta.xKeysByGroups[xGroupKey]);\n return res;\n }, []);\n\n result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n const existingYKeys = sortByLabels(lodash.uniq(\n lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n ), yAxis.sorting, result.meta.yLabels);\n res[yGroupKey] = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], existingYKeys) : existingYKeys;\n return res;\n }, {});\n result.meta.yKeys = result.meta.yGroupKeys.reduce((res: string[], yGroupKey: string) => {\n res = res.concat(result.meta.yKeysByGroups[yGroupKey]);\n return res;\n }, []);\n\n for (const valueSource of result.meta.valueSources) {\n // avoid render errors on empty data\n if (result.meta.valueExtent[valueSource][0] === Infinity) {\n result.meta.valueExtent[valueSource][0] = 0;\n }\n if (result.meta.valueExtent[valueSource][1] === -Infinity) {\n result.meta.valueExtent[valueSource][1] = 0;\n }\n }\n\n result.meta.xLabels['null'] = xColumn.nullValueLabel ?? 'NA';\n result.meta.yLabels['null'] = yColumn.nullValueLabel ?? 'NA';\n result.meta.xGroupLabels['null'] = xGroupBy.map(column => column.nullValueLabel ?? 'NA').join(', ');\n result.meta.yGroupLabels['null'] = yGroupBy.map(column => column.nullValueLabel ?? 'NA').join(', ');\n return 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1	+ {"version":3,"file":"fillCellsData.js","names":[],"sources":["../../src/heatmap/fillCellsData.ts"],"sourcesContent":["import { deviation, extent, mean, quantileSorted, sum } from 'd3-array';\nimport lodash from 'lodash';\nimport type { DataFrame } from '../DataFrame';\nimport type { AggregationMethod, ColumnName, DataValue, NormalizationMethod } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport { exhaustive } from '../utils';\nimport { getFacetOrGroupKey } from '../utils/getFacetOrGroupKey';\nimport type { BubbleSettingsImpl } from '../bubble/BubbleSettingsImpl';\nimport { getFacetLabels } from '../discrete/utils/getFacetLabels';\nimport { getFacetStringKey } from '../discrete/utils/getFacetStringKey';\n\nexport type Cell<T extends string> = {\n isCell: true;\n idx: number;\n id: string;\n value: Record<T, DataValue>;\n normalizedValue: Record<T, DataValue>;\n x: DataValue;\n y: DataValue;\n};\n\nexport type GroupedCellsData<T extends string> = {\n meta: {\n valueSources: T[]; // dataSource for heatmap, color and size for bubble - main data for every cell\n\n facetKeys: string[];\n xGroupKeys: string[];\n yGroupKeys: string[];\n\n xKeys: string[];\n yKeys: string[];\n xKeysByGroups: Record<string, string[]>;\n yKeysByGroups: Record<string, string[]>;\n\n // for titles, if facet by more 1 columns title has several values separated by commas\n facetKeyValues: Record<string, string[]>;\n xGroupKeyValues: Record<string, string[]>;\n yGroupKeyValues: Record<string, string[]>;\n\n xLabels: Record<string, string>;\n yLabels: Record<string, string>;\n xGroupLabels: Record<string, string>;\n yGroupLabels: Record<string, string>;\n\n valueExtent: Record<T, [number, number]>; // for color/size scales\n // data for labels, annotations and dendrograms\n xDataByKeys: Record<string, Record<string, DataValue>>;\n yDataByKeys: Record<string, Record<string, DataValue>>;\n };\n //facet groups\n facets: Record<\n string,\n {\n // axis keys\n xKeys: string[];\n yKeys: string[];\n // axis keys grouped by group keys from meta\n xKeysByGroups: Record<string, string[]>;\n yKeysByGroups: Record<string, string[]>;\n // cells grouped by X, then by Y\n cells: Record<string, Record<string, Cell<T>>>;\n }\n >;\n};\n\nfunction normalizeByStd(values: number[]) {\n const stdValue = deviation(values);\n const meanValue = mean(values);\n\n if (stdValue === undefined \|\| meanValue === undefined \|\| stdValue === 0) {\n return (v: number) => v;\n }\n return (v: number) => (v - meanValue) / stdValue;\n}\nfunction normalizeByMinMax(values: number[]) {\n const meanValue = mean(values);\n const [min, max] = extent(values);\n if (meanValue === undefined \|\| min === undefined \|\| max === undefined \|\| max === min) {\n return (v: number) => v;\n }\n return (v: number) => (v - meanValue) / (max - min);\n}\n\nfunction getNormalizationFn(method: NormalizationMethod, values: number[]) {\n if (method === 'standardScaling') {\n return normalizeByStd(values);\n }\n if (method === 'meanNormalization') {\n return normalizeByMinMax(values);\n }\n return (v: number) => v;\n}\n\nfunction aggregateNumeric(method: AggregationMethod, values: number[]) {\n switch (method) {\n case 'max': {\n let res = values[0];\n for (const v of values) {\n res = Math.max(res, v);\n }\n return res;\n }\n case 'min': {\n let res = values[0];\n for (const v of values) {\n res = Math.min(res, v);\n }\n return res;\n }\n case 'median': {\n const valuesSorted = values.sort((a, b) => a - b);\n return quantileSorted(valuesSorted, 0.5) as number;\n }\n case 'mean': {\n return mean(values) ?? values[0];\n }\n case 'sum': {\n return sum(values) as number;\n }\n default: exhaustive(method, `Unknown aggregation function ${method}`);\n }\n}\nfunction aggregateString(values: string[]) {\n const list = [...new Set(values)].sort();\n if (list.length > 3) {\n return [...list.slice(0, 3), '...'].join(', ');\n }\n return list.join(', ');\n}\n\n// all combinations with 1 key from each list\nfunction getKeysCombinations(keysLists: string[][]) {\n if (!keysLists.length) {\n return [];\n }\n let result: string[][] = [[]];\n keysLists.forEach(keys => {\n const nextResult: string[][] = [];\n keys.forEach(key => {\n nextResult.push(...result.map(resultItem => [...resultItem, key]));\n });\n result = nextResult;\n });\n return result;\n}\nconst sortByLabels = (arr: string[], direction: 'asc' \| 'desc', labels: Record<string, string> = {}) => {\n return arr.sort((a, b) => direction === 'asc'\n ? (labels[a] ?? a).localeCompare((labels[b] ?? b), 'en', { numeric: true })\n : (labels[b] ?? b).localeCompare((labels[a] ?? a), 'en', { numeric: true })\n );\n};\nfunction applyAggregation<T extends string>(\n result: GroupedCellsData<T>,\n aggregation: HeatmapSettingsImpl['aggregation'],\n additionalDataColumnsX: string[],\n additionalDataColumnsY: string[],\n annotations: HeatmapSettingsImpl['annotations']\n) {\n if (aggregation.x \|\| aggregation.y) {\n const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n r[key] = [Infinity, -Infinity] as [number, number];\n return r;\n }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n result.meta.facetKeys.forEach(facetKey => {\n const { xKeys, yKeys, cells, xKeysByGroups, yKeysByGroups } = result.facets[facetKey];\n const xGroups = aggregation.x ? xKeysByGroups : xKeys.reduce((res, xKey) => { res[xKey] = [xKey]; return res; }, {} as Record<string, string[]>);\n const yGroups = aggregation.y ? yKeysByGroups : yKeys.reduce((res, yKey) => { res[yKey] = [yKey]; return res; }, {} as Record<string, string[]>);\n const xNewKeys = Object.keys(xGroups);\n const yNewKeys = Object.keys(yGroups);\n\n for (const xGroupKey of xNewKeys) {\n for (const yGroupKey of yNewKeys) {\n // collect values for aggregation to arrays\n const valuesBySources: Record<T, number[]> = result.meta.valueSources.reduce((r, v) => {\n r[v] = [];\n return r;\n }, {} as Record<T, number[]>);\n xGroups[xGroupKey].forEach((xKey) => {\n yGroups[yGroupKey].forEach((yKey) => {\n for (const valueSource of result.meta.valueSources) {\n const cellValue = cells[xKey]?.[yKey]?.value?.[valueSource];\n if (cellValue !== undefined) {\n valuesBySources[valueSource].push(cellValue as number);\n }\n }\n delete cells[xKey]?.[yKey];\n });\n });\n // create new cells with aggregated values\n for (const valueSource of result.meta.valueSources) {\n const values = valuesBySources[valueSource];\n if (values.length > 0) {\n const value = aggregateNumeric(aggregation.method, values);\n if (!result.facets[facetKey].cells[xGroupKey]) {\n result.facets[facetKey].cells[xGroupKey] = {};\n }\n if (!result.facets[facetKey].cells[xGroupKey][yGroupKey]) {\n result.facets[facetKey].cells[xGroupKey][yGroupKey] = {\n isCell: true,\n idx: 0,\n id: `${xGroupKey}_${yGroupKey}`,\n x: xGroupKey,\n y: yGroupKey,\n value: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n normalizedValue: result.meta.valueSources.reduce((r, v) => { r[v] = null; return r; }, {} as Record<T, DataValue>),\n };\n }\n const cell = result.facets[facetKey].cells[xGroupKey][yGroupKey];\n cell.value[valueSource] = value;\n cell.normalizedValue[valueSource] = value;\n\n valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n }\n }\n }\n }\n // add aggregated values for X annotations\n if (aggregation.x) {\n xNewKeys.forEach(xGroupKey => {\n additionalDataColumnsX.forEach(columnKey => {\n const annotation = annotations.find((v) => v.valueColumn.value === columnKey \|\| v.valueColumn.valueLabels === columnKey);\n if (!annotation) {\n return;\n }\n const values: DataValue[] = [];\n xGroups[xGroupKey].forEach((xKey) => {\n values.push(result.meta.xDataByKeys[columnKey][xKey]);\n delete result.meta.xDataByKeys[columnKey][xKey];\n });\n const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n result.meta.xDataByKeys[columnKey][xGroupKey] = value;\n });\n });\n }\n // add aggregated values for Y annotations\n if (aggregation.y) {\n additionalDataColumnsY.forEach(columnKey => {\n result.meta.yDataByKeys[columnKey] = {};\n });\n yNewKeys.forEach(yGroupKey => {\n additionalDataColumnsY.forEach(columnKey => {\n const annotation = annotations.find((v) => v.valueColumn.value === columnKey \|\| v.valueColumn.valueLabels === columnKey);\n if (!annotation) {\n return;\n }\n const values: DataValue[] = [];\n yGroups[yGroupKey].forEach((yKey) => {\n values.push(result.meta.yDataByKeys[columnKey][yKey]);\n delete result.meta.yDataByKeys[columnKey][yKey];\n });\n const value = annotation.type === 'continuous' ? aggregateNumeric(aggregation.method, values as number[]) : aggregateString(values as string[]);\n result.meta.yDataByKeys[columnKey][yGroupKey] = value;\n });\n });\n }\n // erase grouping - we aggregated by them and now there is no grouping in the chart;\n // replace axis keys with group keys - now group keys are new axis keys\n if (aggregation.x) {\n result.facets[facetKey].xKeys = Object.keys(xKeysByGroups);\n result.facets[facetKey].xKeysByGroups = { 'null': result.facets[facetKey].xKeys };\n result.meta.xLabels = result.meta.xGroupLabels;\n result.meta.xGroupKeys = ['null'];\n result.meta.xGroupKeyValues = { null: ['null'] };\n }\n if (aggregation.y) {\n result.facets[facetKey].yKeys = Object.keys(yKeysByGroups);\n result.facets[facetKey].yKeysByGroups = { 'null': result.facets[facetKey].yKeys };\n result.meta.yLabels = result.meta.yGroupLabels;\n result.meta.yGroupKeys = ['null'];\n result.meta.yGroupKeyValues = { null: ['null'] };\n }\n });\n result.meta.valueExtent = valueExtent;\n }\n}\n\nfunction updateValueExtent<T extends string>(result: GroupedCellsData<T>, cell: Cell<T>) {\n for (const valueSource of result.meta.valueSources) {\n result.meta.valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][0]);\n result.meta.valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource] as number, result.meta.valueExtent[valueSource][1]);\n }\n\n}\nfunction applyNormalization<T extends string>(\n result: GroupedCellsData<T>,\n normalizationBySources: Record<T, HeatmapSettingsImpl['normalization']>,\n) {\n if (Object.values(normalizationBySources).length) {\n const valueExtent: GroupedCellsData<T>['meta']['valueExtent'] = result.meta.valueSources.reduce((r, key) => {\n if (normalizationBySources[key]) {\n r[key] = [Infinity, -Infinity] as [number, number];\n }\n return r;\n }, {} as GroupedCellsData<T>['meta']['valueExtent']);\n result.meta.facetKeys.forEach(facetKey => {\n const { xKeys, yKeys, cells } = result.facets[facetKey];\n\n for (const valueSource of result.meta.valueSources) {\n const normalization = normalizationBySources[valueSource];\n if (!normalization) {\n continue;\n }\n const cellKeys = normalization.direction === 'row' ? xKeys : yKeys;\n const groupKeys = normalization.direction === 'row' ? yKeys : xKeys;\n const cellGetter = normalization.direction === 'row'\n ? (cellKey: string, groupKey: string) => cells[cellKey]?.[groupKey]\n : (cellKey: string, groupKey: string) => cells[groupKey]?.[cellKey];\n groupKeys.forEach((groupKey) => {\n const values: number[] = [];\n cellKeys.forEach((cellKey) => {\n const v = cellGetter(cellKey, groupKey)?.value?.[valueSource];\n if (v !== undefined) {\n values.push(v as number);\n }\n });\n const normalize = getNormalizationFn(normalization.method, values);\n cellKeys.forEach((cellKey) => {\n const cell = cellGetter(cellKey, groupKey);\n if (cell !== undefined) {\n cell.normalizedValue[valueSource] = normalize(cell.value?.[valueSource] as number);\n valueExtent[valueSource][0] = Math.min(cell.normalizedValue?.[valueSource], valueExtent[valueSource][0]);\n valueExtent[valueSource][1] = Math.max(cell.normalizedValue?.[valueSource], valueExtent[valueSource][1]);\n }\n });\n });\n }\n\n });\n result.meta.valueExtent = {...result.meta.valueExtent, valueExtent};\n }\n}\n\nexport function fillCellsData<T extends string>(\n result: GroupedCellsData<T>,\n data: DataFrame,\n xColumn: ColumnName,\n yColumn: ColumnName,\n valueColumns: Record<string, ColumnName>,\n facetBy: ColumnName[],\n xGroupBy: ColumnName[],\n yGroupBy: ColumnName[],\n facetSettings: HeatmapSettingsImpl['facetSettings'],\n annotations: HeatmapSettingsImpl['annotations'],\n dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n normalizationBySource: Record<T, HeatmapSettingsImpl['normalization']>, // separated for color and size for example\n NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n keysOrder: HeatmapSettingsImpl['keysOrder'],\n xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'] \| BubbleSettingsImpl['chartSettings']['xAxis'],\n yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'] \| BubbleSettingsImpl['chartSettings']['yAxis'],\n aggregation: HeatmapSettingsImpl['aggregation'],\n) {\n const facetKeysLists = facetBy.length\n ? facetBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n : [['null']];\n\n const xGroupKeysLists = xGroupBy.length\n ? xGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n : [['null']];\n const yGroupKeysLists = yGroupBy.length\n ? yGroupBy.map(column => keysOrder[column.value] ?? data.getColumnCategories(column.value))\n : [['null']];\n let facetKeysCombinations = getKeysCombinations(facetKeysLists);\n const xGroupKeysCombinations = getKeysCombinations(xGroupKeysLists);\n const yGroupKeysCombinations = getKeysCombinations(yGroupKeysLists);\n\n if (facetSettings?.order?.length) {\n facetKeysCombinations = facetKeysCombinations.filter(keys => facetSettings.order?.includes(getFacetStringKey(keys)));\n }\n const facetKeys = facetKeysCombinations.map(getFacetOrGroupKey);\n const facetKeysSet = new Set(facetKeys);\n const xGroupKeys = xGroupKeysCombinations.map(getFacetOrGroupKey);\n const yGroupKeys = yGroupKeysCombinations.map(getFacetOrGroupKey);\n\n result.meta.facetKeys = facetKeys;\n result.meta.xGroupKeys = xGroupKeys;\n result.meta.yGroupKeys = yGroupKeys;\n\n const facetLabels = getFacetLabels(data, facetBy, facetKeys, facetKeysCombinations);\n result.meta.facetKeyValues = facetKeys.reduce((res: Record<string, string[]>, key) => {\n res[key] = facetLabels[key];\n return res;\n }, {});\n\n result.meta.xGroupKeyValues = xGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = xGroupKeysCombinations[index];\n return res;\n }, {});\n result.meta.yGroupKeyValues = yGroupKeys.reduce((res: Record<string, string[]>, key, index) => {\n res[key] = yGroupKeysCombinations[index];\n return res;\n }, {});\n\n const xLabelsSource = xColumn.valueLabels ?? xColumn.value;\n const yLabelsSource = yColumn.valueLabels ?? yColumn.value;\n const annotationColumnsX = annotations.filter(item => item.axis === 'x').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n const annotationColumnsY = annotations.filter(item => item.axis === 'y').map(item => item.valueColumn.valueLabels ?? item.valueColumn.value);\n const dendrogramXColumns = Object.values(dendrogramX ?? {}).map(column => column.value);\n const dendrogramYColumns = Object.values(dendrogramY ?? {}).map(column => column.value);\n const additionalDataColumnsX = lodash.uniq([...annotationColumnsX, ...dendrogramXColumns, xLabelsSource]);\n const additionalDataColumnsY = lodash.uniq([...annotationColumnsY, ...dendrogramYColumns, yLabelsSource]);\n\n for (let i = 0; i < data.rowsCount; i++) {\n const facetKey = getFacetOrGroupKey(facetBy.map(column => data.getColumnValue(column.value, i)));\n if (!facetKeysSet.has(facetKey)) {\n continue;\n }\n const xGroupKey = getFacetOrGroupKey(xGroupBy.map(column => data.getColumnValue(column.value, i)));\n const yGroupKey = getFacetOrGroupKey(yGroupBy.map(column => data.getColumnValue(column.value, i)));\n const xGroupLabel = xGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n const yGroupLabel = yGroupBy.map(column => data.getColumnValue(column.valueLabels ?? column.value, i)).join(', ');\n result.meta.xGroupLabels[xGroupKey] = xGroupLabel;\n result.meta.yGroupLabels[yGroupKey] = yGroupLabel;\n const x = String(data.getColumnValue(xColumn.value, i));\n const y = String(data.getColumnValue(yColumn.value, i));\n\n const values = result.meta.valueSources.reduce((r, key) => {\n r[key] = (data.getColumnValue(valueColumns[key].value, i) ?? NAValueAs) as number \| null;\n return r;\n }, {} as Record<string, DataValue>);\n\n if (x === 'null' \|\| y === 'null' \|\| Object.values(values).every(v => v === null)) {\n continue;\n }\n\n if (!result.facets[facetKey]) {\n result.facets[facetKey] = {\n xKeys: [],\n yKeys: [],\n xKeysByGroups: {},\n yKeysByGroups: {},\n cells: {},\n };\n }\n if (!result.facets[facetKey].xKeysByGroups[xGroupKey]) {\n result.facets[facetKey].xKeysByGroups[xGroupKey] = [];\n }\n if (!result.facets[facetKey].yKeysByGroups[yGroupKey]) {\n result.facets[facetKey].yKeysByGroups[yGroupKey] = [];\n }\n result.facets[facetKey].xKeys.push(x);\n result.facets[facetKey].yKeys.push(y);\n result.facets[facetKey].xKeysByGroups[xGroupKey].push(x);\n result.facets[facetKey].yKeysByGroups[yGroupKey].push(y);\n\n if (!result.facets[facetKey].cells[x]) {\n result.facets[facetKey].cells[x] = {};\n }\n\n for (const valueSource of result.meta.valueSources) {\n if (result.facets[facetKey].cells[x][y] && result.facets[facetKey].cells[x][y].value[valueSource] !== values[valueSource]) {\n throw Error(`More than 1 value for x=${x}, y=${y}`);\n }\n }\n\n const xLabelsSourceValue = data.getColumnValue(xLabelsSource, i);\n if (result.meta.xLabels[x] && String(xLabelsSourceValue) !== result.meta.xLabels[x]) {\n throw Error(`More than 1 x-label value for x=${x}`);\n }\n const yLabelsSourceValue = data.getColumnValue(yLabelsSource, i);\n if (result.meta.yLabels[y] && String(yLabelsSourceValue) !== result.meta.yLabels[y]) {\n throw Error(`More than 1 y-label value for y=${y}`);\n }\n result.meta.xLabels[x] = String(xLabelsSourceValue);\n result.meta.yLabels[y] = String(yLabelsSourceValue);\n // data for labels, annotations and dendrograms by X\n additionalDataColumnsX.forEach(columnKey => {\n const isAddedColumn = typeof result.meta.xDataByKeys[columnKey] !== 'undefined';\n const isAddedValue = isAddedColumn && typeof result.meta.xDataByKeys[columnKey][x] !== 'undefined';\n if (!isAddedColumn) {\n result.meta.xDataByKeys[columnKey] = {};\n }\n if (isAddedValue && result.meta.xDataByKeys[columnKey][x] !== data.getColumnValue(columnKey, i)) {\n throw Error(`More than 1 value for x = ${x} and column = ${columnKey}`);\n }\n if (!isAddedValue) {\n result.meta.xDataByKeys[columnKey][x] = data.getColumnValue(columnKey, i);\n }\n });\n // data for labels, annotations and dendrograms by Y\n additionalDataColumnsY.forEach(columnKey => {\n const isAddedColumn = typeof result.meta.yDataByKeys[columnKey] !== 'undefined';\n const isAddedValue = isAddedColumn && typeof result.meta.yDataByKeys[columnKey][y] !== 'undefined';\n if (!isAddedColumn) {\n result.meta.yDataByKeys[columnKey] = {};\n }\n if (isAddedValue && result.meta.yDataByKeys[columnKey][y] !== data.getColumnValue(columnKey, i)) {\n throw Error(`More than 1 value for y = ${y} and column = ${columnKey}`);\n }\n if (!isAddedValue) {\n result.meta.yDataByKeys[columnKey][y] = data.getColumnValue(columnKey, i);\n }\n });\n result.facets[facetKey].cells[x][y] = {\n isCell: true,\n idx: i,\n id: `${x}_${y}`,\n x,\n y,\n value: values,\n normalizedValue: values,\n };\n\n updateValueExtent(result, result.facets[facetKey].cells[x][y]);\n }\n\n result.meta.facetKeys = result.meta.facetKeys.filter((key) => result.facets[key]); // filter only used;\n\n // make uniq x, y, x-group and y-group keys\n result.meta.facetKeys.forEach(facetKey => {\n const facet = result.facets[facetKey];\n const uniqueXKeys = lodash.uniq(facet.xKeys);\n const uniqueYKeys = lodash.uniq(facet.yKeys);\n facet.xKeys = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], uniqueXKeys) : uniqueXKeys;\n facet.yKeys = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], uniqueYKeys) : uniqueYKeys;\n xGroupKeys.forEach(xGroupKey => {\n result.facets[facetKey].xKeysByGroups[xGroupKey] = lodash.intersection(\n facet.xKeys,\n result.facets[facetKey].xKeysByGroups[xGroupKey]\n );\n });\n yGroupKeys.forEach(yGroupKey => {\n result.facets[facetKey].yKeysByGroups[yGroupKey] = lodash.intersection(\n facet.yKeys,\n result.facets[facetKey].yKeysByGroups[yGroupKey]\n );\n });\n });\n\n applyAggregation(result, aggregation, additionalDataColumnsX, additionalDataColumnsY, annotations);\n applyNormalization(result, normalizationBySource);\n\n // every facet may contain not all of available keys, but for shared axes it is necessary to have all of them\n result.meta.xKeysByGroups = result.meta.xGroupKeys.reduce((res: Record<string, string[]>, xGroupKey) => {\n const existingXKeys = sortByLabels(lodash.uniq(\n lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].xKeysByGroups[xGroupKey]))\n ), xAxis.sorting, result.meta.xLabels);\n res[xGroupKey] = keysOrder[xColumn.value] ? lodash.intersection(keysOrder[xColumn.value], existingXKeys) : existingXKeys;\n return res;\n }, {});\n result.meta.xKeys = result.meta.xGroupKeys.reduce((res: string[], xGroupKey: string) => {\n res = res.concat(result.meta.xKeysByGroups[xGroupKey]);\n return res;\n }, []);\n\n result.meta.yKeysByGroups = result.meta.yGroupKeys.reduce((res: Record<string, string[]>, yGroupKey) => {\n const existingYKeys = sortByLabels(lodash.uniq(\n lodash.flatten(result.meta.facetKeys.map(facetKey => result.facets[facetKey].yKeysByGroups[yGroupKey]))\n ), yAxis.sorting, result.meta.yLabels);\n res[yGroupKey] = keysOrder[yColumn.value] ? lodash.intersection(keysOrder[yColumn.value], existingYKeys) : existingYKeys;\n return res;\n }, {});\n result.meta.yKeys = result.meta.yGroupKeys.reduce((res: string[], yGroupKey: string) => {\n res = res.concat(result.meta.yKeysByGroups[yGroupKey]);\n return res;\n }, []);\n\n for (const valueSource of result.meta.valueSources) {\n // avoid render errors on empty data\n if (result.meta.valueExtent[valueSource][0] === Infinity) {\n result.meta.valueExtent[valueSource][0] = 0;\n }\n if (result.meta.valueExtent[valueSource][1] === -Infinity) {\n result.meta.valueExtent[valueSource][1] = 0;\n }\n }\n\n result.meta.xLabels['null'] = xColumn.nullValueLabel ?? 'NA';\n result.meta.yLabels['null'] = yColumn.nullValueLabel ?? 'NA';\n result.meta.xGroupLabels['null'] = xGroupBy.map(column => column.nullValueLabel ?? 'NA').join(', ');\n result.meta.yGroupLabels['null'] = yGroupBy.map(column => column.nullValueLabel ?? 'NA').join(', ');\n return 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package/dist/heatmap/getCells.js CHANGED Viewed

@@ -1,53 +1,33 @@
-import { fillCellsData as d } from "./fillCellsData.js";
-function m() {
-  return {
-    meta: {
-      valueSources: ["dataSource"],
-      facetKeys: [],
-      xKeys: [],
-      yKeys: [],
-      xGroupKeys: [],
-      yGroupKeys: [],
-      xKeysByGroups: {},
-      yKeysByGroups: {},
-      xLabels: {},
-      yLabels: {},
-      xGroupLabels: {},
-      yGroupLabels: {},
-      xDataByKeys: {},
-      yDataByKeys: {},
-      facetKeyValues: {},
-      xGroupKeyValues: {},
-      yGroupKeyValues: {},
-      valueExtent: { dataSource: [1 / 0, -1 / 0] }
-    },
-    facets: {}
-  };
+import { fillCellsData as e } from "./fillCellsData.js";
+function t() {
+	return {
+		meta: {
+			valueSources: ["dataSource"],
+			facetKeys: [],
+			xKeys: [],
+			yKeys: [],
+			xGroupKeys: [],
+			yGroupKeys: [],
+			xKeysByGroups: {},
+			yKeysByGroups: {},
+			xLabels: {},
+			yLabels: {},
+			xGroupLabels: {},
+			yGroupLabels: {},
+			xDataByKeys: {},
+			yDataByKeys: {},
+			facetKeyValues: {},
+			xGroupKeyValues: {},
+			yGroupKeyValues: {},
+			valueExtent: { dataSource: [Infinity, -Infinity] }
+		},
+		facets: {}
+	};
 }
-function L(a, y, s, t, u, r, o, l, n, p, K, c, f, x, G, i, b) {
-  const e = m();
-  return d(
-    e,
-    a,
-    y,
-    s,
-    t,
-    u,
-    r,
-    o,
-    l,
-    n,
-    p,
-    K,
-    { dataSource: c },
-    f,
-    x,
-    G,
-    i,
-    b
-  ), e;
+function n(n, r, i, a, o, s, c, l, u, d, f, p, m, h, g, _, v) {
+	let y = t();
+	return e(y, n, r, i, a, o, s, c, l, u, d, f, { dataSource: p }, m, h, g, _, v), y;
 }
-export {
-  L as getCells
-};
-//# sourceMappingURL=getCells.js.map
+export { n as getCells };
+//# sourceMappingURL=getCells.js.map

package/dist/heatmap/getCells.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"getCells.js","sources":["../../src/heatmap/getCells.ts"],"sourcesContent":["import type { DataFrame } from '../DataFrame';\nimport type { ColumnName } from '../types';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport type { Cell, GroupedCellsData } from './fillCellsData';\nimport { fillCellsData } from './fillCellsData';\n\nexport type CellHeatmap = Cell<'dataSource'>\nexport type GroupedCellsHeatmap = GroupedCellsData<'dataSource'>;\n\nfunction createEmptyGroupedCells(): GroupedCellsHeatmap {\n return {\n meta: {\n valueSources: ['dataSource'],\n facetKeys: [],\n xKeys: [],\n yKeys: [],\n xGroupKeys: [],\n yGroupKeys: [],\n xKeysByGroups: {},\n yKeysByGroups: {},\n xLabels: {},\n yLabels: {},\n xGroupLabels: {},\n yGroupLabels: {},\n xDataByKeys: {},\n yDataByKeys: {},\n facetKeyValues: {},\n xGroupKeyValues: {},\n yGroupKeyValues: {},\n valueExtent: { dataSource: [Infinity, -Infinity] },\n },\n facets: {},\n };\n}\n\nexport function getCells(\n data: DataFrame,\n xColumn: ColumnName,\n yColumn: ColumnName,\n valueColumns: Record<string, ColumnName>,\n facetBy: ColumnName[],\n xGroupBy: ColumnName[],\n yGroupBy: ColumnName[],\n facetSettings: HeatmapSettingsImpl['facetSettings'],\n annotations: HeatmapSettingsImpl['annotations'],\n dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n normalization: HeatmapSettingsImpl['normalization'],\n NAValueAs: HeatmapSettingsImpl['NAValueAs'],\n keysOrder: HeatmapSettingsImpl['keysOrder'],\n xAxis: HeatmapSettingsImpl['chartSettings']['xAxis'],\n yAxis: HeatmapSettingsImpl['chartSettings']['yAxis'],\n aggregation: HeatmapSettingsImpl['aggregation'],\n): GroupedCellsHeatmap {\n const result: GroupedCellsHeatmap = createEmptyGroupedCells();\n fillCellsData(\n result,\n data,\n xColumn, yColumn, valueColumns,\n facetBy, xGroupBy, yGroupBy,\n facetSettings,\n annotations,\n dendrogramX, dendrogramY,\n {dataSource: normalization},\n NAValueAs,\n keysOrder,\n xAxis,\n yAxis,\n aggregation\n );\n return result;\n}\n"],"names":["createEmptyGroupedCells","getCells","data","xColumn","yColumn","valueColumns","facetBy","xGroupBy","yGroupBy","facetSettings","annotations","dendrogramX","dendrogramY","normalization","NAValueAs","keysOrder","xAxis","yAxis","aggregation","result","fillCellsData"],"mappings":";AASA,~~SAASA~~,IAA+C;AACpD,~~SAAO~~;~~AAAA~~,~~IACH,~~MAAM;~~AAAA~~,~~MACF,~~cAAc,CAAC,~~YAAY~~;~~AAAA~~,~~MAC3B,~~WAAW,~~CAAA~~;~~AAAA~~,~~MACX,~~OAAO,~~CAAA~~;~~AAAA~~,~~MACP,~~OAAO,~~CAAA~~;~~AAAA~~,~~MACP,~~YAAY,~~CAAA~~;~~AAAA~~,~~MACZ,~~YAAY,~~CAAA~~;~~AAAA~~,~~MACZ,~~eAAe,~~CAAA~~;~~AAAA~~,~~MACf,~~eAAe,~~CAAA~~;~~AAAA~~,~~MACf,~~SAAS,~~CAAA~~;~~AAAA~~,~~MACT,~~SAAS,~~CAAA~~;~~AAAA~~,~~MACT,~~cAAc,~~CAAA~~;~~AAAA~~,~~MACd,~~cAAc,~~CAAA~~;~~AAAA~~,~~MACd,~~aAAa,~~CAAA~~;~~AAAA~~,~~MACb,~~aAAa,~~CAAA~~;~~AAAA~~,~~MACb,~~gBAAgB,~~CAAA~~;~~AAAA~~,~~MAChB,~~iBAAiB,~~CAAA~~;~~AAAA~~,~~MACjB,~~iBAAiB,~~CAAA~~;~~AAAA~~,~~MACjB,~~aAAa,EAAE,YAAY,CAAC,~~OAAU~~,~~MAAS~~,~~EAAA~~;~~AAAA,IAAE~~;~~AAAA~~,~~IAErD,~~QAAQ,~~CAAA~~;~~AAAA~~,~~EAAC;AAEjB;AAEO~~,~~SAASC~~,~~EACZC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC~~,~~GACAC,~~GACmB;~~AACnB~~,~~QAAMC~~,~~IAA8BnB~~,~~EAAA~~;~~AACpC~~,~~SAAAoB;AAAA~~,~~IACID;AAAA~~,~~IACAjB;AAAA~~,~~IACAC;AAAA~~,~~IAASC;AAAA~~,~~IAASC;AAAA~~,~~IAClBC;AAAA~~,~~IAASC;AAAA~~,~~IAAUC;AAAA~~,~~IACnBC;AAAA~~,~~IACAC;AAAA~~,~~IACAC;AAAA~~,~~IAAaC;AAAA~~,~~IACb~~,EAAC,~~YAAYC~~,~~EAAA;AAAA~~,~~IACbC;AAAA~~,~~IACAC;AAAA~~,~~IACAC;AAAA~~,~~IACAC;AAAA~~,~~IACAC;AAAA~~,~~EAAA~~,~~GAEGC;AACX;~~"}
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+function n(n) {
+	let r;
+	try {
+		if (r = t && (self.URL || self.webkitURL).createObjectURL(t), !r) throw "";
+		let e = new Worker(r, { name: n?.name });
+		return e.addEventListener("error", () => {
+			(self.URL || self.webkitURL).revokeObjectURL(r);
+		}), e;
+	} catch {
+		return new Worker("data:text/javascript;charset=utf-8," + encodeURIComponent(e), { name: n?.name });
+	}
 }
-export {
-  o as default
-};
-//# sourceMappingURL=getClusters.js.map
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+//# sourceMappingURL=getClusters.js.map

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package/dist/heatmap/getDendrograms.js CHANGED Viewed

@@ -1,52 +1,37 @@
-import { WorkerFactory as G } from "../utils/WorkerFactory.js";
-import k from "./getClusters.js";
-import w from "../node_modules/.pnpm/d3-hierarchy@3.1.2/node_modules/d3-hierarchy/src/hierarchy/index.js";
-const f = new G(() => new k());
-async function z(y, p, n) {
-  const { facetKeys: B, xGroupKeys: K, yGroupKeys: x } = y.meta, l = {};
-  return !p && !n || (f.reset(), await Promise.all(B.map(async (a) => {
-    const m = {
-      hierarchyByGroupX: {},
-      hierarchyByGroupY: {}
-    }, t = y.facets[a];
-    if (p) {
-      const i = [], h = await Promise.all(K.map(async (s) => {
-        const o = t.xKeysByGroups[s], e = t.yKeys;
-        return f.wrapper.getClustersApproximate(
-          o.map((r) => e.map((c) => {
-            var u;
-            return ((u = t.cells[r][c]) == null ? void 0 : u.normalizedValue.dataSource) ?? p.fillNA;
-          })),
-          p.distance,
-          p.linkage
-        );
-      }));
-      K.forEach((s, o) => {
-        const e = h[o], r = e.indexes.map((c) => t.xKeysByGroups[s][c]);
-        y.facets[a].xKeysByGroups[s] = r, i.push(...r), m.hierarchyByGroupX[s] = w(e);
-      }), y.facets[a].xKeys = i;
-    }
-    if (n) {
-      const i = [], h = await Promise.all(x.map(async (s) => {
-        const o = t.yKeysByGroups[s], e = t.xKeys;
-        return f.wrapper.getClustersApproximate(
-          o.map((r) => e.map((c) => {
-            var u;
-            return ((u = t.cells[c][r]) == null ? void 0 : u.normalizedValue.dataSource) ?? n.fillNA;
-          })),
-          n.distance,
-          n.linkage
-        );
-      }));
-      x.forEach((s, o) => {
-        const e = h[o], r = e.indexes.map((c) => t.yKeysByGroups[s][c]);
-        y.facets[a].yKeysByGroups[s] = r, i.push(...r), m.hierarchyByGroupY[s] = w(e);
-      }), y.facets[a].yKeys = i;
-    }
-    l[a] = m;
-  }))), l;
+import { WorkerFactory as e } from "../utils/WorkerFactory.js";
+import t from "./getClusters.js";
+import { hierarchy as n } from "d3-hierarchy";
+var r = new e(() => new t());
+async function i(e, t, i) {
+	let { facetKeys: a, xGroupKeys: o, yGroupKeys: s } = e.meta, c = {};
+	return !t && !i ? c : (r.reset(), await Promise.all(a.map(async (a) => {
+		let l = {
+			hierarchyByGroupX: {},
+			hierarchyByGroupY: {}
+		}, u = e.facets[a];
+		if (t) {
+			let i = [], s = await Promise.all(o.map(async (e) => {
+				let n = u.xKeysByGroups[e], i = u.yKeys;
+				return r.wrapper.getClustersApproximate(n.map((e) => i.map((n) => u.cells[e][n]?.normalizedValue.dataSource ?? t.fillNA)), t.distance, t.linkage);
+			}));
+			o.forEach((t, r) => {
+				let o = s[r], c = o.indexes.map((e) => u.xKeysByGroups[t][e]);
+				e.facets[a].xKeysByGroups[t] = c, i.push(...c), l.hierarchyByGroupX[t] = n(o);
+			}), e.facets[a].xKeys = i;
+		}
+		if (i) {
+			let t = [], o = await Promise.all(s.map(async (e) => {
+				let t = u.yKeysByGroups[e], n = u.xKeys;
+				return r.wrapper.getClustersApproximate(t.map((e) => n.map((t) => u.cells[t][e]?.normalizedValue.dataSource ?? i.fillNA)), i.distance, i.linkage);
+			}));
+			s.forEach((r, i) => {
+				let s = o[i], c = s.indexes.map((e) => u.yKeysByGroups[r][e]);
+				e.facets[a].yKeysByGroups[r] = c, t.push(...c), l.hierarchyByGroupY[r] = n(s);
+			}), e.facets[a].yKeys = t;
+		}
+		c[a] = l;
+	})), c);
 }
-export {
-  z as getDendrograms
-};
-//# sourceMappingURL=getDendrograms.js.map
+export { i as getDendrograms };
+//# sourceMappingURL=getDendrograms.js.map

package/dist/heatmap/getDendrograms.js.map CHANGED Viewed

	@@ -1 +1 @@
1	- {"version":3,"file":"getDendrograms.js","sources":["../../src/heatmap/getDendrograms.ts"],"sourcesContent":["import type { Cluster } from './components/types';\nimport type { GroupedCellsHeatmap } from './getCells';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport type { HierarchyNode } from 'd3-hierarchy';\nimport { hierarchy } from 'd3-hierarchy';\nimport type { getClustersApproximate } from './getClusters';\nimport { WorkerFactory } from '../utils/WorkerFactory';\nimport GetClustersWorker from './getClusters?worker&inline';\n\nexport type DendrogramsData = Record<string, {\n hierarchyByGroupX: Record<string, HierarchyNode<Cluster>>;\n hierarchyByGroupY: Record<string, HierarchyNode<Cluster>>;\n}>\n\nconst workerWrapper = new WorkerFactory<{ getClustersApproximate: typeof getClustersApproximate }>(() => new GetClustersWorker());\n\nexport async function getDendrograms(\n groupedCellsData: GroupedCellsHeatmap,\n dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n): Promise<DendrogramsData> {\n const { facetKeys, xGroupKeys, yGroupKeys } = groupedCellsData.meta;\n const result: DendrogramsData = {};\n\n if (!dendrogramX && !dendrogramY) {\n return result;\n }\n workerWrapper.reset();\n await Promise.all(facetKeys.map(async facetKey => {\n const facetResult: DendrogramsData[string] = {\n hierarchyByGroupX: {},\n hierarchyByGroupY: {},\n };\n const cellsGroup = groupedCellsData.facets[facetKey];\n if (dendrogramX) {\n const updatedXKeys: string[] = [];\n const rootClusters = await Promise.all(xGroupKeys.map(async xGroupKey => {\n const xKeys = cellsGroup.xKeysByGroups[xGroupKey];\n const yKeys = cellsGroup.yKeys;\n return workerWrapper.wrapper.getClustersApproximate(\n xKeys.map(x => yKeys.map(y => (cellsGroup.cells[x][y]?.normalizedValue.dataSource ?? dendrogramX.fillNA) as number)),\n dendrogramX.distance,\n dendrogramX.linkage\n ); \n }));\n xGroupKeys.forEach((xGroupKey, idx) => {\n //set sorted group keys\n const rootCluster = rootClusters[idx];\n const newXKeys = rootCluster.indexes.map(i => cellsGroup.xKeysByGroups[xGroupKey][i]);\n groupedCellsData.facets[facetKey].xKeysByGroups[xGroupKey] = newXKeys;\n updatedXKeys.push(...newXKeys);\n facetResult.hierarchyByGroupX[xGroupKey] = hierarchy(rootCluster);\n });\n // set sorted group keys of all groups\n groupedCellsData.facets[facetKey].xKeys = updatedXKeys;\n }\n if (dendrogramY) {\n const updatedYKeys: string[] = [];\n const rootClusters = await Promise.all(yGroupKeys.map(async yGroupKey => {\n const yKeys = cellsGroup.yKeysByGroups[yGroupKey];\n const xKeys = cellsGroup.xKeys;\n return workerWrapper.wrapper.getClustersApproximate(\n yKeys.map(y => xKeys.map(x => (cellsGroup.cells[x][y]?.normalizedValue.dataSource ?? dendrogramY.fillNA) as number)),\n dendrogramY.distance,\n dendrogramY.linkage\n );\n }));\n yGroupKeys.forEach((yGroupKey, idx) => {\n const rootCluster = rootClusters[idx];\n const newYKeys = rootCluster.indexes.map(i => cellsGroup.yKeysByGroups[yGroupKey][i]);\n groupedCellsData.facets[facetKey].yKeysByGroups[yGroupKey] = newYKeys;\n updatedYKeys.push(...newYKeys);\n facetResult.hierarchyByGroupY[yGroupKey] = hierarchy(rootCluster);\n });\n // set sorted group keys of all groups\n groupedCellsData.facets[facetKey].yKeys = updatedYKeys;\n }\n result[facetKey] = facetResult;\n }));\n\n return result;\n}\n"],"names":["workerWrapper","WorkerFactory","GetClustersWorker","getDendrograms","groupedCellsData","dendrogramX","dendrogramY","facetKeys","xGroupKeys","yGroupKeys","result","facetKey","facetResult","cellsGroup","updatedXKeys","rootClusters","xGroupKey","xKeys","yKeys","x","_a","y","idx","rootCluster","newXKeys","i","hierarchy","updatedYKeys","yGroupKey","newYKeys"],"mappings":";;;AAcA,~~MAAMA~~,IAAgB,~~IAAIC~~,~~EAAyE~~,~~MAAM~~,~~IAAIC~~,~~GAAmB~~;~~AAEhI~~,~~eAAsBC~~,~~EAClBC~~,~~GACAC~~,~~GACAC~~,GACwB;~~AACxB~~,~~QAAM~~,EAAE,~~WAAAC~~,~~GAAW~~,~~YAAAC~~,~~GAAY,YAAAC,EAAA,IAAeL,~~EAAiB,~~MACzDM~~,IAA0B,~~CAAA~~;~~AAEhC~~,~~SAAI~~,~~CAACL~~,KAAe,~~CAACC~~,~~MAGrBN~~,EAAc,~~MAAA~~,~~GACd~~,MAAM,QAAQ,~~IAAIO~~,EAAU,IAAI,~~OAAMI~~,MAAY;~~AAC9C~~,~~UAAMC~~,IAAuC;~~AAAA~~,~~MACzC,~~mBAAmB,~~CAAA~~;~~AAAA~~,~~MACnB,~~mBAAmB,~~CAAA~~;~~AAAA~~,~~IAAC~~,~~GAElBC~~,~~IAAaT,~~EAAiB,~~OAAOO,CAAQ~~;~~AACnD~~,~~QAAIN~~,GAAa;~~AACb~~,~~YAAMS~~,IAAyB,~~CAAA~~,~~GACzBC~~,IAAe,MAAM,QAAQ,~~IAAIP~~,EAAW,IAAI,~~OAAMQ~~,MAAa;~~AACrE~~,~~cAAMC~~,~~IAAQJ~~,EAAW,~~cAAcG~~,~~CAAS~~,~~GAC1CE~~,~~IAAQL,~~EAAW;AACzB,~~eAAOb~~,EAAc,QAAQ~~;AAAA~~,~~UACzBiB~~,EAAM,~~IAAI~~,~~CAAAE~~,~~MAAKD,~~EAAM,~~IAAI;;AAAM~~,~~qBAAAE~~,~~IAAAP,~~EAAW,~~MAAMM~~,~~CAAC~~,~~EAAEE~~,~~CAAC,MAArB,gBAAAD,EAAwB,~~gBAAgB,~~eAAcf~~,EAAY~~;AAAA~~,~~WAAiB~~,CAAC~~;AAAA~~,~~UACnHA~~,EAAY~~;AAAA~~,~~UACZA~~,EAAY~~;AAAA~~,~~QAAA~~;~~AAAA~~,~~MAEpB,~~CAAC~~,CAAC~~;~~AACF~~,~~MAAAG~~,EAAW,~~QAAQ~~,~~CAACQ~~,~~GAAWM,~~MAAQ;~~AAEnC~~,~~cAAMC~~,~~IAAcR~~,~~EAAaO~~,~~CAAG~~,~~GAC9BE~~,~~IAAWD,~~EAAY,QAAQ,~~IAAI~~,~~CAAAE~~,~~MAAKZ,~~EAAW,~~cAAcG~~,~~CAAS~~,~~EAAES,CAAC,CAAC~~;~~AACpF~~,~~QAAArB~~,EAAiB,~~OAAOO~~,~~CAAQ~~,~~EAAE~~,~~cAAcK~~,~~CAAS~~,~~IAAIQ,GAC7DV,~~EAAa,KAAK,~~GAAGU~~,~~CAAQ~~,~~GAC7BZ~~,EAAY,~~kBAAkBI~~,~~CAAS~~,~~IAAIU~~,~~EAAUH,CAAW~~;~~AAAA~~,~~MACpE~~,~~CAAC,GAEDnB,~~EAAiB,~~OAAOO~~,~~CAAQ~~,~~EAAE~~,~~QAAQG;AAAA~~,~~IAC9C;AACA,QAAIR,~~GAAa;~~AACb~~,~~YAAMqB~~,IAAyB,~~CAAA~~,~~GACzBZ~~,IAAe,MAAM,QAAQ,~~IAAIN~~,EAAW,IAAI,~~OAAMmB~~,MAAa;~~AACrE~~,~~cAAMV~~,~~IAAQL~~,EAAW,~~cAAce~~,~~CAAS~~,~~GAC1CX~~,~~IAAQJ,~~EAAW;AACzB,~~eAAOb~~,EAAc,QAAQ~~;AAAA~~,~~UACzBkB~~,EAAM,~~IAAI~~,~~CAAAG~~,~~MAAKJ,~~EAAM,~~IAAI;;AAAM~~,~~qBAAAG~~,~~IAAAP,~~EAAW,~~MAAMM~~,~~CAAC~~,~~EAAEE~~,~~CAAC,MAArB,gBAAAD,EAAwB,~~gBAAgB,~~eAAcd~~,EAAY~~;AAAA~~,~~WAAiB~~,CAAC~~;AAAA~~,~~UACnHA~~,EAAY~~;AAAA~~,~~UACZA~~,EAAY~~;AAAA~~,~~QAAA~~;~~AAAA~~,~~MAEpB,~~CAAC~~,CAAC~~;~~AACF~~,~~MAAAG~~,EAAW,~~QAAQ~~,~~CAACmB~~,~~GAAWN,~~MAAQ;~~AACnC~~,~~cAAMC~~,~~IAAcR~~,~~EAAaO~~,~~CAAG~~,~~GAC9BO~~,~~IAAWN,~~EAAY,QAAQ,~~IAAI~~,~~CAAAE~~,~~MAAKZ,~~EAAW,~~cAAce~~,~~CAAS~~,~~EAAEH,CAAC,CAAC~~;~~AACpF~~,~~QAAArB~~,EAAiB,~~OAAOO~~,~~CAAQ~~,~~EAAE~~,~~cAAciB~~,~~CAAS~~,~~IAAIC,GAC7DF,~~EAAa,KAAK,~~GAAGE~~,~~CAAQ~~,~~GAC7BjB~~,EAAY,~~kBAAkBgB~~,~~CAAS~~,~~IAAIF~~,~~EAAUH,CAAW~~;~~AAAA~~,~~MACpE~~,~~CAAC,GAEDnB,~~EAAiB,~~OAAOO~~,~~CAAQ~~,~~EAAE~~,~~QAAQgB;AAAA~~,~~IAC9C~~;~~AACA~~,~~IAAAjB,EAAOC,CAAQ,IAAIC;AAAA,EACvB,~~CAAC,~~CAAC,IAEKF;AACX;~~"}
1	+ {"version":3,"file":"getDendrograms.js","names":[],"sources":["../../src/heatmap/getDendrograms.ts"],"sourcesContent":["import type { Cluster } from './components/types';\nimport type { GroupedCellsHeatmap } from './getCells';\nimport type { HeatmapSettingsImpl } from './HeatmapSettingsImpl';\nimport type { HierarchyNode } from 'd3-hierarchy';\nimport { hierarchy } from 'd3-hierarchy';\nimport type { getClustersApproximate } from './getClusters';\nimport { WorkerFactory } from '../utils/WorkerFactory';\nimport GetClustersWorker from './getClusters?worker&inline';\n\nexport type DendrogramsData = Record<string, {\n hierarchyByGroupX: Record<string, HierarchyNode<Cluster>>;\n hierarchyByGroupY: Record<string, HierarchyNode<Cluster>>;\n}>\n\nconst workerWrapper = new WorkerFactory<{ getClustersApproximate: typeof getClustersApproximate }>(() => new GetClustersWorker());\n\nexport async function getDendrograms(\n groupedCellsData: GroupedCellsHeatmap,\n dendrogramX: HeatmapSettingsImpl['dendrogramX'],\n dendrogramY: HeatmapSettingsImpl['dendrogramY'],\n): Promise<DendrogramsData> {\n const { facetKeys, xGroupKeys, yGroupKeys } = groupedCellsData.meta;\n const result: DendrogramsData = {};\n\n if (!dendrogramX && !dendrogramY) {\n return result;\n }\n workerWrapper.reset();\n await Promise.all(facetKeys.map(async facetKey => {\n const facetResult: DendrogramsData[string] = {\n hierarchyByGroupX: {},\n hierarchyByGroupY: {},\n };\n const cellsGroup = groupedCellsData.facets[facetKey];\n if (dendrogramX) {\n const updatedXKeys: string[] = [];\n const rootClusters = await Promise.all(xGroupKeys.map(async xGroupKey => {\n const xKeys = cellsGroup.xKeysByGroups[xGroupKey];\n const yKeys = cellsGroup.yKeys;\n return workerWrapper.wrapper.getClustersApproximate(\n xKeys.map(x => yKeys.map(y => (cellsGroup.cells[x][y]?.normalizedValue.dataSource ?? dendrogramX.fillNA) as number)),\n dendrogramX.distance,\n dendrogramX.linkage\n ); \n }));\n xGroupKeys.forEach((xGroupKey, idx) => {\n //set sorted group keys\n const rootCluster = rootClusters[idx];\n const newXKeys = rootCluster.indexes.map(i => cellsGroup.xKeysByGroups[xGroupKey][i]);\n groupedCellsData.facets[facetKey].xKeysByGroups[xGroupKey] = newXKeys;\n updatedXKeys.push(...newXKeys);\n facetResult.hierarchyByGroupX[xGroupKey] = hierarchy(rootCluster);\n });\n // set sorted group keys of all groups\n groupedCellsData.facets[facetKey].xKeys = updatedXKeys;\n }\n if (dendrogramY) {\n const updatedYKeys: string[] = [];\n const rootClusters = await Promise.all(yGroupKeys.map(async yGroupKey => {\n const yKeys = cellsGroup.yKeysByGroups[yGroupKey];\n const xKeys = cellsGroup.xKeys;\n return workerWrapper.wrapper.getClustersApproximate(\n yKeys.map(y => xKeys.map(x => (cellsGroup.cells[x][y]?.normalizedValue.dataSource ?? dendrogramY.fillNA) as number)),\n dendrogramY.distance,\n dendrogramY.linkage\n );\n }));\n yGroupKeys.forEach((yGroupKey, idx) => {\n const rootCluster = rootClusters[idx];\n const newYKeys = rootCluster.indexes.map(i => cellsGroup.yKeysByGroups[yGroupKey][i]);\n groupedCellsData.facets[facetKey].yKeysByGroups[yGroupKey] = newYKeys;\n updatedYKeys.push(...newYKeys);\n facetResult.hierarchyByGroupY[yGroupKey] = hierarchy(rootCluster);\n });\n // set sorted group keys of all groups\n groupedCellsData.facets[facetKey].yKeys = updatedYKeys;\n }\n result[facetKey] = facetResult;\n }));\n\n return result;\n}\n"],"mappings":";;;AAcA,IAAM,IAAgB,IAAI,QAA+E,IAAI,GAAmB,CAAC;AAEjI,eAAsB,EAClB,GACA,GACA,GACwB;CACxB,IAAM,EAAE,cAAW,eAAY,kBAAe,EAAiB,MACzD,IAA0B,EAAE;AA0DlC,QAxDI,CAAC,KAAe,CAAC,IACV,KAEX,EAAc,OAAO,EACrB,MAAM,QAAQ,IAAI,EAAU,IAAI,OAAM,MAAY;EAC9C,IAAM,IAAuC;GACzC,mBAAmB,EAAE;GACrB,mBAAmB,EAAE;GACxB,EACK,IAAa,EAAiB,OAAO;AAC3C,MAAI,GAAa;GACb,IAAM,IAAyB,EAAE,EAC3B,IAAe,MAAM,QAAQ,IAAI,EAAW,IAAI,OAAM,MAAa;IACrE,IAAM,IAAQ,EAAW,cAAc,IACjC,IAAQ,EAAW;AACzB,WAAO,EAAc,QAAQ,uBACzB,EAAM,KAAI,MAAK,EAAM,KAAI,MAAM,EAAW,MAAM,GAAG,IAAI,gBAAgB,cAAc,EAAY,OAAkB,CAAC,EACpH,EAAY,UACZ,EAAY,QACf;KACH,CAAC;AAUH,GATA,EAAW,SAAS,GAAW,MAAQ;IAEnC,IAAM,IAAc,EAAa,IAC3B,IAAW,EAAY,QAAQ,KAAI,MAAK,EAAW,cAAc,GAAW,GAAG;AAGrF,IAFA,EAAiB,OAAO,GAAU,cAAc,KAAa,GAC7D,EAAa,KAAK,GAAG,EAAS,EAC9B,EAAY,kBAAkB,KAAa,EAAU,EAAY;KACnE,EAEF,EAAiB,OAAO,GAAU,QAAQ;;AAE9C,MAAI,GAAa;GACb,IAAM,IAAyB,EAAE,EAC3B,IAAe,MAAM,QAAQ,IAAI,EAAW,IAAI,OAAM,MAAa;IACrE,IAAM,IAAQ,EAAW,cAAc,IACjC,IAAQ,EAAW;AACzB,WAAO,EAAc,QAAQ,uBACzB,EAAM,KAAI,MAAK,EAAM,KAAI,MAAM,EAAW,MAAM,GAAG,IAAI,gBAAgB,cAAc,EAAY,OAAkB,CAAC,EACpH,EAAY,UACZ,EAAY,QACf;KACH,CAAC;AASH,GARA,EAAW,SAAS,GAAW,MAAQ;IACnC,IAAM,IAAc,EAAa,IAC3B,IAAW,EAAY,QAAQ,KAAI,MAAK,EAAW,cAAc,GAAW,GAAG;AAGrF,IAFA,EAAiB,OAAO,GAAU,cAAc,KAAa,GAC7D,EAAa,KAAK,GAAG,EAAS,EAC9B,EAAY,kBAAkB,KAAa,EAAU,EAAY;KACnE,EAEF,EAAiB,OAAO,GAAU,QAAQ;;AAE9C,IAAO,KAAY;GACrB,CAAC,EAEI"}