@milaboratories/miplots4 1.0.176 → 1.0.178

package/dist/discrete/DiscreteSettingsImpl.js.map

@@ -1 +1 @@
-{"version":3,"file":"DiscreteSettingsImpl.js","sources":["../../src/discrete/DiscreteSettingsImpl.ts"],"sourcesContent":["import { BLACK, DEFAULT_HEIGHT, DEFAULT_HEIGHT_SMALL, DEFAULT_WIDTH, DEFAULT_WIDTH_SMALL } from '../constants';\nimport type {\n    AesRecord,\n    AggregationMethod,\n    Color,\n    ColumnName,\n    DataValue,\n    DiscreteSettings,\n    FrameType,\n    InheritAesDiscrete,\n    LegendPosition,\n    LineShape,\n    Orientation,\n    BarLayer as OuterBarLayer,\n    BinnedDotsLayer as OuterBinnedDotsLayer,\n    BoxLayer as OuterBoxLayer,\n    DotLayer as OuterDotLayer,\n    ErrorBarLayer as OuterErrorBarLayer,\n    LineLayer as OuterLineLayer,\n    LogoPlotLayer as OuterLogoPlotLayer,\n    PairedPointsLayer as OuterPairedPointsLayer,\n    SinaLayer as OuterSinaLayer,\n    StackedAreaLayer as OuterStackedAreaLayer,\n    StackedBarLayer as OuterStackedBarLayer,\n    StatLayer as OuterStatLayer,\n    ViolinLayer as OuterViolinLayer,\n    PointShape,\n    PValueCorrectionMethod,\n    SettingsInterface,\n    SignificanceLevels,\n    StatTestMethod,\n    SummaryErrorValue,\n    SummaryGroupValue,\n    TitlePosition,\n    TooltipSettings,\n} from '../types';\nimport { DiscreteSettingsSchema } from '../types';\nimport { MIN_MARGIN, PADDINGS } from './constants';\n\nimport lodash from 'lodash';\nimport { exhaustive } from '../utils';\n\nconst DEFAULT_FILL = '#3e9838';\nconst DEFAULT_DOT_SHAPE = '21';\nconst DEFAULT_DOT_SIZE = 3;\n\nabstract class BaseDiscreteLayer {\n    abstract type: string;\n    abstract isEqualForCalculation(otherLayer: DiscreteLayer): boolean;\n}\n\nexport class BoxLayer extends BaseDiscreteLayer {\n    readonly type = 'box';\n    readonly stat: {\n        upper: number;\n        medium: number;\n        lower: number;\n        k: number;\n    } = {\n        upper: 0.75,\n        medium: 0.5,\n        lower: 0.25,\n        k: 1.5,\n    };\n    readonly aes: {\n        showOutliers: boolean;\n        boxWidth: 'auto' | number;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: InheritAesDiscrete | number;\n        dotFill: InheritAesDiscrete | string;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineWidth: number;\n        lineShape: LineShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        boxWidth: 'auto',\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotFill: BLACK,\n        dotSize: DEFAULT_DOT_SIZE,\n        lineColor: BLACK,\n        fillColor: DEFAULT_FILL,\n        lineWidth: 1,\n        lineShape: 'solid',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBoxLayer) {\n        super();\n        this.stat = {\n            ...this.stat,\n            ...layer.stat,\n        };\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'box' &&\n            (Object.keys(this.stat) as (keyof BoxLayer['stat'])[]).every(key => this.stat[key] === otherLayer.stat[key])\n        );\n    }\n}\n\nexport class ViolinLayer extends BaseDiscreteLayer {\n    readonly type = 'violin';\n    readonly stat: {\n        bandwidth: 'auto' | number;\n        stepsCount: 'auto' | number;\n        trim: boolean;\n    } = {\n        bandwidth: 'auto',\n        stepsCount: 40,\n        trim: true,\n    };\n    readonly aes: {\n        width: 'auto' | number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineWidth: number;\n        lineShape: LineShape;\n        opacity: number;\n        showQuartiles: boolean;\n        medianLineStyle: LineShape;\n        quartilesLineStyle: LineShape;\n    } = {\n        width: 'auto',\n        lineColor: BLACK,\n        fillColor: DEFAULT_FILL,\n        lineWidth: 1,\n        lineShape: 'solid',\n        opacity: 1,\n        showQuartiles: true,\n        medianLineStyle: 'solid',\n        quartilesLineStyle: 'dashed'\n    };\n\n    constructor(layer: OuterViolinLayer) {\n        super();\n        this.stat = {\n            ...this.stat,\n            ...layer.stat,\n        };\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'violin' && (\n                this.stat.bandwidth !== otherLayer.stat.bandwidth ||\n                this.stat.trim !== otherLayer.stat.trim ||\n                this.stat.stepsCount !== otherLayer.stat.stepsCount\n            )\n        );\n    }\n}\n\nexport class DotLayer extends BaseDiscreteLayer {\n    readonly type = 'dot';\n    readonly aes: {\n        showOutliers: boolean;\n        jitter: number;\n        dotFill: InheritAesDiscrete | string;\n        lineColor: InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        jitter: 0.8,\n        lineColor: 'none',\n        dotFill: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterDotLayer) {\n        super();\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'dot' && this.aes.showOutliers === otherLayer.aes.showOutliers;\n    }\n}\n\nexport class LineLayer extends BaseDiscreteLayer {\n    readonly type = 'line';\n    readonly pointsValues: SummaryGroupValue;\n    readonly emptyGroupValue: number;\n    readonly aes: {\n        showOutliers: boolean;\n        lineWidth: number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineShape: InheritAesDiscrete | LineShape;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        lineWidth: 1,\n        lineShape: 'solid',\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLineLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.emptyGroupValue = layer.emptyGroupValue ?? 0;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'line' && this.pointsValues === otherLayer.pointsValues && this.emptyGroupValue === otherLayer.emptyGroupValue;\n    }\n}\n\nexport class ErrorBarLayer extends BaseDiscreteLayer {\n    readonly type = 'errorbar';\n    readonly pointsValues: SummaryGroupValue;\n    readonly interval: SummaryErrorValue;\n    readonly aes: {\n        showDots: boolean;\n        width: number | 'auto';\n        lineWidth: number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showDots: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterErrorBarLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.interval = layer.interval;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'errorbar' &&\n            this.pointsValues === otherLayer.pointsValues &&\n            this.interval === otherLayer.interval\n        );\n    }\n}\n\nexport class BarLayer extends BaseDiscreteLayer {\n    readonly type = 'bar';\n    readonly height: AggregationMethod;\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBarLayer) {\n        super();\n        this.height = layer.height ?? 'max';\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'bar' && this.height === otherLayer.height;\n    }\n}\n\nexport class StackedBarLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedBar';\n    readonly normalize: boolean = false;\n    readonly height: AggregationMethod;\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterStackedBarLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.height = layer.height ?? 'sum';\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedBar' && otherLayer.normalize === this.normalize && otherLayer.height === this.height;\n    }\n}\n\nexport class StackedAreaLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedArea';\n    readonly normalize: boolean = false;\n    readonly height: AggregationMethod;\n    readonly showBars: boolean = true;\n    readonly aes: {\n        barWidth: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        barsOpacity: number;\n        areaOpacity: number;\n    } = {\n        barWidth: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        barsOpacity: 1,\n        areaOpacity: 0.7,\n    };\n\n    constructor(layer: OuterStackedAreaLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.height = layer.height ?? 'sum';\n        this.showBars = layer.showBars ?? true;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedArea' && otherLayer.normalize === this.normalize && otherLayer.height === this.height && otherLayer.showBars === this.showBars;\n    }\n}\n\nexport class LogoPlotLayer extends BaseDiscreteLayer {\n    readonly type = 'logo';\n    readonly normalize: boolean = false;\n    readonly aes: {\n        width: number | 'auto';\n        fillColor: Record<string, string> | Color;\n        lineColor: Color;\n        opacity: number;\n    } = {\n        width: 'auto',\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLogoPlotLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'logo' && otherLayer.normalize === this.normalize;\n    }\n}\n\nexport class BinnedDotsLayer extends BaseDiscreteLayer {\n    readonly type = 'binnedDots';\n    readonly method: 'dotdensity' | 'histodot';\n    readonly position: 'stack' | 'jitter';\n    readonly keyColumn: ColumnName | null;\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        dotSize?: number;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBinnedDotsLayer) {\n        super();\n        this.method = layer.method ?? 'dotdensity';\n        this.position = layer.position ?? 'stack';\n        this.keyColumn = layer.keyColumn ?? null;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'binnedDots' &&\n            this.method === otherLayer.method &&\n            this.position === otherLayer.position &&\n            this.keyColumn?.value === otherLayer.keyColumn?.value\n        );\n    }\n}\n\nexport class PairedPointsLayer extends BaseDiscreteLayer {\n    readonly type = 'pairedPoints';\n    readonly linkColumn: ColumnName;\n    readonly aes: {\n        showOutliers: boolean;\n        lineColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        lineShape: LineShape;\n        dotFill: InheritAesDiscrete | Color;\n        dotSize: number;\n        dotShape: PointShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        lineWidth: 1,\n        lineColor: BLACK,\n        lineShape: 'solid',\n        dotFill: BLACK,\n        dotSize: DEFAULT_DOT_SIZE,\n        dotShape: DEFAULT_DOT_SHAPE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterPairedPointsLayer) {\n        super();\n        this.linkColumn = layer.linkColumn;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'pairedPoints' &&\n            this.aes.showOutliers === otherLayer.aes.showOutliers &&\n            this.linkColumn.value === otherLayer.linkColumn.value\n        );\n    }\n}\n\nexport class SinaLayer extends BaseDiscreteLayer {\n    readonly type = 'sina';\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        dotFill: InheritAesDiscrete | Color;\n        dotSize: number;\n        dotShape: InheritAesDiscrete | PointShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        dotFill: DEFAULT_FILL,\n        dotSize: DEFAULT_DOT_SIZE,\n        dotShape: DEFAULT_DOT_SHAPE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterSinaLayer) {\n        super();\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'sina' && this.aes.showOutliers === otherLayer.aes.showOutliers;\n    }\n}\n\nexport class StatLayer extends BaseDiscreteLayer {\n    readonly type = 'stat';\n    readonly statType: 'overall' | 'referenceGroup' | 'pairwise';\n    readonly testMethod: StatTestMethod;\n    readonly paired: boolean;\n    readonly ns: boolean;\n    readonly format: 'significance' | 'pValue';\n    readonly referenceGroup: DataValue | null = null;\n    readonly correctionMethod: PValueCorrectionMethod | null = null;\n    readonly significanceLevels: SignificanceLevels;\n\n    constructor(layer: OuterStatLayer) {\n        super();\n        this.statType = layer.statType;\n        this.testMethod = layer.testMethod;\n        this.paired = layer.paired ?? false;\n        this.ns = layer.ns ?? true;\n        this.format = layer.format ?? 'pValue';\n        if (this.statType === 'referenceGroup') {\n            this.referenceGroup = layer.referenceGroup ?? null;\n        }\n        if (this.statType === 'referenceGroup' || this.statType === 'pairwise') {\n            this.correctionMethod = layer.correctionMethod ?? null;\n        }\n        this.significanceLevels = {\n            one: layer.significanceLevels?.one ?? 0.05,\n            two: layer.significanceLevels?.two ?? 0.01,\n            three: layer.significanceLevels?.three ?? 0.001,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stat' && (Object.keys(this) as (keyof StatLayer)[]).every(key => this[key] === otherLayer[key]);\n    }\n}\n\nexport type DiscreteLayer =\n    | StackedAreaLayer\n    | BoxLayer\n    | ViolinLayer\n    | DotLayer\n    | LineLayer\n    | ErrorBarLayer\n    | BarLayer\n    | StackedBarLayer\n    | BinnedDotsLayer\n    | PairedPointsLayer\n    | SinaLayer\n    | StatLayer\n    | LogoPlotLayer;\n\nexport class DiscreteSettingsImpl implements SettingsInterface {\n    readonly id: string;\n    readonly type = 'discrete';\n    readonly y: ColumnName;\n    readonly keyColumn: ColumnName | null;\n    readonly primaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n        unlimitedGroupsCount?: boolean;\n    } | null;\n    readonly secondaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n        unlimitedGroupsCount?: boolean;\n    } | null;\n    readonly facetSettings: {\n        sharedX: boolean;\n        sharedY: boolean;\n        /** Ordered list of facet keys (ready keys); only these facets are shown, in this order */\n        order?: string[];\n        nRows?: number;\n        nCols?: number;\n        titlePosition?: 'left' | 'right' | 'center';\n    } | null;\n    readonly facetBy: ColumnName[];\n    readonly chartSettings: {\n        readonly size: {width: number; height: number, outerOffset: number, innerOffset: number};\n        readonly title: {name: string; show: boolean; position: TitlePosition};\n        readonly orientation: Orientation;\n        readonly yAxis: {\n            title: string | ColumnName;\n            scale: 'linear' | 'log';\n            showGrid: boolean;\n            showTicks: boolean;\n            hiddenLabels: boolean;\n        };\n        readonly xAxis: {\n            title: string | ColumnName;\n            showGrid: boolean;\n            linesBetweenCategories: boolean;\n            showTicks: boolean;\n            labelsPosition: 'center' | '45deg' | '90deg';\n            hiddenLabels: boolean;\n        };\n        readonly frame: {type: FrameType};\n        readonly legend: {show: boolean; position: LegendPosition};\n        readonly tooltips: {\n            box: TooltipSettings;\n            violin: TooltipSettings;\n            boxOutliers: TooltipSettings;\n            line: TooltipSettings;\n            dot: TooltipSettings;\n            errorBar: TooltipSettings;\n            binnedDots: TooltipSettings;\n            pairedPoints: TooltipSettings;\n            stackedBar: TooltipSettings;\n            logo: TooltipSettings;\n        };\n    };\n\n    readonly layers: DiscreteLayer[];\n\n    constructor(settings: DiscreteSettings) {\n        DiscreteSettingsSchema.parse(settings);\n        this.id = lodash.uniqueId('settings');\n        this.y = settings.y; // throw error if empty or if y.name doesn't exist in input table\n        this.keyColumn = settings.keyColumn ?? null;\n        this.primaryGrouping = settings.primaryGrouping ? { unlimitedGroupsCount: false, ...settings.primaryGrouping } : null; // check columnName\n        this.secondaryGrouping = settings.secondaryGrouping ? { unlimitedGroupsCount: false, ...settings.secondaryGrouping } : null; // check columnName\n        this.facetSettings = {\n            sharedX: true,\n            sharedY: true,\n            titlePosition: 'left',\n            ...settings.facetSettings,\n        };\n        this.facetBy = settings.facetBy ?? [];\n        this.chartSettings = {\n            size: {\n                width: settings?.size?.width ?? (this.facetBy.length ? DEFAULT_WIDTH_SMALL : DEFAULT_WIDTH),\n                height: settings?.size?.height ?? (this.facetBy.length ? DEFAULT_HEIGHT_SMALL : DEFAULT_HEIGHT),\n                outerOffset: settings?.size?.outerOffset ?? MIN_MARGIN,\n                innerOffset: settings?.size?.innerOffset ?? PADDINGS.TOP\n            },\n            title: {\n                position: 'center',\n                show: true,\n                ...settings.title,\n                name: settings.title?.name ?? 'Chart',\n            },\n            orientation: settings.orientation ?? 'vertical',\n            yAxis: {\n                title: settings.y?.label ?? settings.y.value ?? '',\n                scale: 'linear',\n                showGrid: true,\n                showTicks: true,\n                hiddenLabels: false,\n                ...settings.yAxis,\n            },\n            xAxis: {\n                title: settings.primaryGrouping?.columnName?.label ?? settings.primaryGrouping?.columnName.value ?? '',\n                showGrid: true,\n                showTicks: true,\n                linesBetweenCategories: true,\n                labelsPosition: 'center',\n                hiddenLabels: false,\n                ...settings.xAxis,\n            },\n            frame: {type: settings.frame?.type ?? 'full'},\n            legend: {\n                show: true,\n                position: 'right',\n                ...settings.legend,\n            },\n            tooltips: {\n                box: {show: true},\n                violin: {show: true},\n                boxOutliers: {show: true},\n                line: {show: true},\n                errorBar: {show: true},\n                dot: {show: true},\n                binnedDots: {show: true},\n                pairedPoints: {show: true},\n                stackedBar: {show: true},\n                logo: {show: false},\n                ...settings.tooltips,\n            },\n        };\n        this.layers = settings.layers\n            .map(layer => {\n                if (layer.type === 'box') {\n                    return new BoxLayer(layer);\n                }\n                if (layer.type === 'violin') {\n                    return new ViolinLayer(layer);\n                }\n                if (layer.type === 'dot') {\n                    return new DotLayer(layer);\n                }\n                if (layer.type === 'line') {\n                    return new LineLayer(layer);\n                }\n                if (layer.type === 'errorbar') {\n                    return new ErrorBarLayer(layer);\n                }\n                if (layer.type === 'bar') {\n                    return new BarLayer(layer);\n                }\n                if (layer.type === 'stackedBar') {\n                    return new StackedBarLayer(layer);\n                }\n                if (layer.type === 'stackedArea') {\n                    return new StackedAreaLayer(layer);\n                }\n                if (layer.type === 'stat') {\n                    return new StatLayer(layer);\n                }\n                if (layer.type === 'binnedDots') {\n                    return new BinnedDotsLayer(layer);\n                }\n                if (layer.type === 'pairedPoints') {\n                    return new PairedPointsLayer(layer);\n                }\n                if (layer.type === 'sina') {\n                    return new SinaLayer(layer);\n                }\n                if (layer.type === 'logo') {\n                    return new LogoPlotLayer(layer);\n                }\n                exhaustive(layer, 'Unknown layer type');\n            })\n            .filter(Boolean) as DiscreteLayer[];\n    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number;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: InheritAesDiscrete | number;\n        dotFill: InheritAesDiscrete | string;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineWidth: number;\n        lineShape: LineShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        boxWidth: 'auto',\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotFill: BLACK,\n        dotSize: DEFAULT_DOT_SIZE,\n        lineColor: BLACK,\n        fillColor: DEFAULT_FILL,\n        lineWidth: 1,\n        lineShape: 'solid',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBoxLayer) {\n        super();\n        this.stat = {\n            ...this.stat,\n            ...layer.stat,\n        };\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'box' &&\n            (Object.keys(this.stat) as (keyof BoxLayer['stat'])[]).every(key => this.stat[key] === otherLayer.stat[key])\n        );\n    }\n}\n\nexport class ViolinLayer extends BaseDiscreteLayer {\n    readonly type = 'violin';\n    readonly stat: {\n        bandwidth: 'auto' | number;\n        stepsCount: 'auto' | number;\n        trim: boolean;\n    } = {\n        bandwidth: 'auto',\n        stepsCount: 40,\n        trim: true,\n    };\n    readonly aes: {\n        width: 'auto' | number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineWidth: number;\n        lineShape: LineShape;\n        opacity: number;\n        showQuartiles: boolean;\n        medianLineStyle: LineShape;\n        quartilesLineStyle: LineShape;\n    } = {\n        width: 'auto',\n        lineColor: BLACK,\n        fillColor: DEFAULT_FILL,\n        lineWidth: 1,\n        lineShape: 'solid',\n        opacity: 1,\n        showQuartiles: true,\n        medianLineStyle: 'solid',\n        quartilesLineStyle: 'dashed'\n    };\n\n    constructor(layer: OuterViolinLayer) {\n        super();\n        this.stat = {\n            ...this.stat,\n            ...layer.stat,\n        };\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'violin' && (\n                this.stat.bandwidth !== otherLayer.stat.bandwidth ||\n                this.stat.trim !== otherLayer.stat.trim ||\n                this.stat.stepsCount !== otherLayer.stat.stepsCount\n            )\n        );\n    }\n}\n\nexport class DotLayer extends BaseDiscreteLayer {\n    readonly type = 'dot';\n    readonly aes: {\n        showOutliers: boolean;\n        jitter: number;\n        dotFill: InheritAesDiscrete | string;\n        lineColor: InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        jitter: 0.8,\n        lineColor: 'none',\n        dotFill: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterDotLayer) {\n        super();\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'dot' && this.aes.showOutliers === otherLayer.aes.showOutliers;\n    }\n}\n\nexport class LineLayer extends BaseDiscreteLayer {\n    readonly type = 'line';\n    readonly pointsValues: SummaryGroupValue;\n    readonly emptyGroupValue: number;\n    readonly aes: {\n        showOutliers: boolean;\n        lineWidth: number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        lineShape: InheritAesDiscrete | LineShape;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        lineWidth: 1,\n        lineShape: 'solid',\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLineLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.emptyGroupValue = layer.emptyGroupValue ?? 0;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'line' && this.pointsValues === otherLayer.pointsValues && this.emptyGroupValue === otherLayer.emptyGroupValue;\n    }\n}\n\nexport class ErrorBarLayer extends BaseDiscreteLayer {\n    readonly type = 'errorbar';\n    readonly pointsValues: SummaryGroupValue;\n    readonly interval: SummaryErrorValue;\n    readonly aes: {\n        showDots: boolean;\n        width: number | 'auto';\n        lineWidth: number;\n        lineColor: InheritAesDiscrete | string;\n        fillColor: InheritAesDiscrete | string;\n        dotShape: InheritAesDiscrete | PointShape;\n        dotSize: number;\n        opacity: number;\n    } = {\n        showDots: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        dotShape: DEFAULT_DOT_SHAPE,\n        dotSize: DEFAULT_DOT_SIZE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterErrorBarLayer) {\n        super();\n        this.pointsValues = layer.pointsValues;\n        this.interval = layer.interval;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'errorbar' &&\n            this.pointsValues === otherLayer.pointsValues &&\n            this.interval === otherLayer.interval\n        );\n    }\n}\n\nexport class BarLayer extends BaseDiscreteLayer {\n    readonly type = 'bar';\n    readonly height: AggregationMethod;\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBarLayer) {\n        super();\n        this.height = layer.height ?? 'max';\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'bar' && this.height === otherLayer.height;\n    }\n}\n\nexport class StackedBarLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedBar';\n    readonly normalize: boolean = false;\n    readonly height: AggregationMethod;\n    readonly aes: {\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterStackedBarLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.height = layer.height ?? 'sum';\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedBar' && otherLayer.normalize === this.normalize && otherLayer.height === this.height;\n    }\n}\n\nexport class StackedAreaLayer extends BaseDiscreteLayer {\n    readonly type = 'stackedArea';\n    readonly normalize: boolean = false;\n    readonly height: AggregationMethod;\n    readonly showBars: boolean = true;\n    readonly aes: {\n        barWidth: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        barsOpacity: number;\n        areaOpacity: number;\n    } = {\n        barWidth: 'auto',\n        lineWidth: 1,\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        barsOpacity: 1,\n        areaOpacity: 0.7,\n    };\n\n    constructor(layer: OuterStackedAreaLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.height = layer.height ?? 'sum';\n        this.showBars = layer.showBars ?? true;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stackedArea' && otherLayer.normalize === this.normalize && otherLayer.height === this.height && otherLayer.showBars === this.showBars;\n    }\n}\n\nexport class LogoPlotLayer extends BaseDiscreteLayer {\n    readonly type = 'logo';\n    readonly normalize: boolean = false;\n    readonly aes: {\n        width: number | 'auto';\n        fillColor: Record<string, string> | Color;\n        lineColor: Color;\n        opacity: number;\n    } = {\n        width: 'auto',\n        fillColor: DEFAULT_FILL,\n        lineColor: 'none',\n        opacity: 1,\n    };\n\n    constructor(layer: OuterLogoPlotLayer) {\n        super();\n        this.normalize = layer.normalize ?? false;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'logo' && otherLayer.normalize === this.normalize;\n    }\n}\n\nexport class BinnedDotsLayer extends BaseDiscreteLayer {\n    readonly type = 'binnedDots';\n    readonly method: 'dotdensity' | 'histodot';\n    readonly position: 'stack' | 'jitter';\n    readonly keyColumn: ColumnName | null;\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        lineColor: InheritAesDiscrete | Color;\n        fillColor: InheritAesDiscrete | Color;\n        dotSize?: number;\n        lineWidth: number;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        lineWidth: 1,\n        fillColor: 'none',\n        lineColor: BLACK,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterBinnedDotsLayer) {\n        super();\n        this.method = layer.method ?? 'dotdensity';\n        this.position = layer.position ?? 'stack';\n        this.keyColumn = layer.keyColumn ?? null;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'binnedDots' &&\n            this.method === otherLayer.method &&\n            this.position === otherLayer.position &&\n            this.keyColumn?.value === otherLayer.keyColumn?.value\n        );\n    }\n}\n\nexport class PairedPointsLayer extends BaseDiscreteLayer {\n    readonly type = 'pairedPoints';\n    readonly linkColumn: ColumnName;\n    readonly aes: {\n        showOutliers: boolean;\n        lineColor: InheritAesDiscrete | Color;\n        lineWidth: number;\n        lineShape: LineShape;\n        dotFill: InheritAesDiscrete | Color;\n        dotSize: number;\n        dotShape: PointShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        lineWidth: 1,\n        lineColor: BLACK,\n        lineShape: 'solid',\n        dotFill: BLACK,\n        dotSize: DEFAULT_DOT_SIZE,\n        dotShape: DEFAULT_DOT_SHAPE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterPairedPointsLayer) {\n        super();\n        this.linkColumn = layer.linkColumn;\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return (\n            otherLayer.type === 'pairedPoints' &&\n            this.aes.showOutliers === otherLayer.aes.showOutliers &&\n            this.linkColumn.value === otherLayer.linkColumn.value\n        );\n    }\n}\n\nexport class SinaLayer extends BaseDiscreteLayer {\n    readonly type = 'sina';\n    readonly aes: {\n        showOutliers: boolean;\n        width: number | 'auto';\n        dotFill: InheritAesDiscrete | Color;\n        dotSize: number;\n        dotShape: InheritAesDiscrete | PointShape;\n        opacity: number;\n    } = {\n        showOutliers: true,\n        width: 'auto',\n        dotFill: DEFAULT_FILL,\n        dotSize: DEFAULT_DOT_SIZE,\n        dotShape: DEFAULT_DOT_SHAPE,\n        opacity: 1,\n    };\n\n    constructor(layer: OuterSinaLayer) {\n        super();\n        this.aes = {\n            ...this.aes,\n            ...layer.aes,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'sina' && this.aes.showOutliers === otherLayer.aes.showOutliers;\n    }\n}\n\nexport class StatLayer extends BaseDiscreteLayer {\n    readonly type = 'stat';\n    readonly statType: 'overall' | 'referenceGroup' | 'pairwise';\n    readonly testMethod: StatTestMethod;\n    readonly paired: boolean;\n    readonly ns: boolean;\n    readonly format: 'significance' | 'pValue';\n    readonly referenceGroup: DataValue | null = null;\n    readonly correctionMethod: PValueCorrectionMethod | null = null;\n    readonly significanceLevels: SignificanceLevels;\n\n    constructor(layer: OuterStatLayer) {\n        super();\n        this.statType = layer.statType;\n        this.testMethod = layer.testMethod;\n        this.paired = layer.paired ?? false;\n        this.ns = layer.ns ?? true;\n        this.format = layer.format ?? 'pValue';\n        if (this.statType === 'referenceGroup') {\n            this.referenceGroup = layer.referenceGroup ?? null;\n        }\n        if (this.statType === 'referenceGroup' || this.statType === 'pairwise') {\n            this.correctionMethod = layer.correctionMethod ?? null;\n        }\n        this.significanceLevels = {\n            one: layer.significanceLevels?.one ?? 0.05,\n            two: layer.significanceLevels?.two ?? 0.01,\n            three: layer.significanceLevels?.three ?? 0.001,\n        };\n    }\n\n    isEqualForCalculation(otherLayer: DiscreteLayer) {\n        return otherLayer.type === 'stat' && (Object.keys(this) as (keyof StatLayer)[]).every(key => this[key] === otherLayer[key]);\n    }\n}\n\nexport type DiscreteLayer =\n    | StackedAreaLayer\n    | BoxLayer\n    | ViolinLayer\n    | DotLayer\n    | LineLayer\n    | ErrorBarLayer\n    | BarLayer\n    | StackedBarLayer\n    | BinnedDotsLayer\n    | PairedPointsLayer\n    | SinaLayer\n    | StatLayer\n    | LogoPlotLayer;\n\nexport class DiscreteSettingsImpl implements SettingsInterface {\n    readonly id: string;\n    readonly type = 'discrete';\n    readonly y: ColumnName;\n    readonly keyColumn: ColumnName | null;\n    readonly primaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n        unlimitedGroupsCount?: boolean;\n    } | null;\n    readonly secondaryGrouping: {\n        columnName: ColumnName;\n        order?: DataValue[];\n        inheritedAes?: AesRecord;\n        allowNullGroup?: boolean;\n        unlimitedGroupsCount?: boolean;\n    } | null;\n    readonly facetSettings: {\n        sharedX: boolean;\n        sharedY: boolean;\n        /** Ordered list of facet keys (ready keys); only these facets are shown, in this order */\n        order?: string[];\n        nRows?: number;\n        nCols?: number;\n        titlePosition?: 'left' | 'right' | 'center';\n    } | null;\n    readonly facetBy: ColumnName[];\n    readonly chartSettings: {\n        readonly size: {width: number; height: number, outerOffset: number, innerOffset: number};\n        readonly title: {name: string; show: boolean; position: TitlePosition};\n        readonly orientation: Orientation;\n        readonly yAxis: {\n            title: string | ColumnName;\n            scale: 'linear' | 'log';\n            showGrid: boolean;\n            showTicks: boolean;\n            hiddenLabels: boolean;\n        };\n        readonly xAxis: {\n            title: string | ColumnName;\n            showGrid: boolean;\n            linesBetweenCategories: boolean;\n            showTicks: boolean;\n            labelsPosition: 'center' | '45deg' | '90deg';\n            hiddenLabels: boolean;\n        };\n        readonly frame: {type: FrameType};\n        readonly legend: {show: boolean; position: LegendPosition};\n        readonly tooltips: {\n            box: TooltipSettings;\n            violin: TooltipSettings;\n            boxOutliers: TooltipSettings;\n            line: TooltipSettings;\n            dot: TooltipSettings;\n            errorBar: TooltipSettings;\n            binnedDots: TooltipSettings;\n            pairedPoints: TooltipSettings;\n            stackedBar: TooltipSettings;\n            logo: TooltipSettings;\n        };\n    };\n\n    readonly layers: DiscreteLayer[];\n\n    constructor(settings: DiscreteSettings) {\n        DiscreteSettingsSchema.parse(settings);\n        this.id = lodash.uniqueId('settings');\n        this.y = settings.y; // throw error if empty or if y.name doesn't exist in input table\n        this.keyColumn = settings.keyColumn ?? null;\n        this.primaryGrouping = settings.primaryGrouping ? { unlimitedGroupsCount: false, ...settings.primaryGrouping } : null; // check columnName\n        this.secondaryGrouping = settings.secondaryGrouping ? { unlimitedGroupsCount: false, ...settings.secondaryGrouping } : null; // check columnName\n        this.facetSettings = {\n            sharedX: true,\n            sharedY: true,\n            titlePosition: 'left',\n            ...settings.facetSettings,\n        };\n        this.facetBy = settings.facetBy ?? [];\n        this.chartSettings = {\n            size: {\n                width: settings?.size?.width ?? (this.facetBy.length ? DEFAULT_WIDTH_SMALL : DEFAULT_WIDTH),\n                height: settings?.size?.height ?? (this.facetBy.length ? DEFAULT_HEIGHT_SMALL : DEFAULT_HEIGHT),\n                outerOffset: settings?.size?.outerOffset ?? MIN_MARGIN,\n                innerOffset: settings?.size?.innerOffset ?? PADDINGS.TOP\n            },\n            title: {\n                position: 'center',\n                show: true,\n                ...settings.title,\n                name: settings.title?.name ?? 'Chart',\n            },\n            orientation: settings.orientation ?? 'vertical',\n            yAxis: {\n                title: settings.y?.label ?? settings.y.value ?? '',\n                scale: 'linear',\n                showGrid: true,\n                showTicks: true,\n                hiddenLabels: false,\n                ...settings.yAxis,\n            },\n            xAxis: {\n                title: settings.primaryGrouping?.columnName?.label ?? settings.primaryGrouping?.columnName.value ?? '',\n                showGrid: true,\n                showTicks: true,\n                linesBetweenCategories: true,\n                labelsPosition: 'center',\n                hiddenLabels: false,\n                ...settings.xAxis,\n            },\n            frame: {type: settings.frame?.type ?? 'full'},\n            legend: {\n                show: true,\n                position: 'right',\n                ...settings.legend,\n            },\n            tooltips: {\n                box: {show: true},\n                violin: {show: true},\n                boxOutliers: {show: true},\n                line: {show: true},\n                errorBar: {show: true},\n                dot: {show: true},\n                binnedDots: {show: true},\n                pairedPoints: {show: true},\n                stackedBar: {show: true},\n                logo: {show: false},\n                ...settings.tooltips,\n            },\n        };\n        this.layers = settings.layers\n            .map(layer => {\n                if (layer.type === 'box') {\n                    return new BoxLayer(layer);\n                }\n                if (layer.type === 'violin') {\n                    return new ViolinLayer(layer);\n                }\n                if (layer.type === 'dot') {\n                    return new DotLayer(layer);\n                }\n                if (layer.type === 'line') {\n                    return new LineLayer(layer);\n                }\n                if (layer.type === 'errorbar') {\n                    return new ErrorBarLayer(layer);\n                }\n                if (layer.type === 'bar') {\n                    return new BarLayer(layer);\n                }\n                if (layer.type === 'stackedBar') {\n                    return new StackedBarLayer(layer);\n                }\n                if (layer.type === 'stackedArea') {\n                    return new StackedAreaLayer(layer);\n                }\n                if (layer.type === 'stat') {\n                    return new StatLayer(layer);\n                }\n                if (layer.type === 'binnedDots') {\n                    return new BinnedDotsLayer(layer);\n                }\n                if (layer.type === 'pairedPoints') {\n                    return new PairedPointsLayer(layer);\n                }\n                if (layer.type === 'sina') {\n                    return new SinaLayer(layer);\n                }\n                if (layer.type === 'logo') {\n                    return new LogoPlotLayer(layer);\n                }\n                exhaustive(layer, 'Unknown layer type');\n            })\n            .filter(Boolean) as DiscreteLayer[];\n    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