@metriport/fhir-sdk 1.2.5

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Files changed (47) hide show
  1. package/LICENSE +21 -0
  2. package/README.md +124 -0
  3. package/dist/__tests__/env-setup.d.ts +2 -0
  4. package/dist/__tests__/env-setup.d.ts.map +1 -0
  5. package/dist/__tests__/env-setup.js +37 -0
  6. package/dist/__tests__/env-setup.js.map +1 -0
  7. package/dist/__tests__/fhir-bundle-sdk-basic.test.d.ts +2 -0
  8. package/dist/__tests__/fhir-bundle-sdk-basic.test.d.ts.map +1 -0
  9. package/dist/__tests__/fhir-bundle-sdk-basic.test.js +19 -0
  10. package/dist/__tests__/fhir-bundle-sdk-basic.test.js.map +1 -0
  11. package/dist/__tests__/fhir-bundle-sdk.test.d.ts +2 -0
  12. package/dist/__tests__/fhir-bundle-sdk.test.d.ts.map +1 -0
  13. package/dist/__tests__/fhir-bundle-sdk.test.js +433 -0
  14. package/dist/__tests__/fhir-bundle-sdk.test.js.map +1 -0
  15. package/dist/__tests__/fixtures/fhir-bundles.d.ts +31 -0
  16. package/dist/__tests__/fixtures/fhir-bundles.d.ts.map +1 -0
  17. package/dist/__tests__/fixtures/fhir-bundles.js +369 -0
  18. package/dist/__tests__/fixtures/fhir-bundles.js.map +1 -0
  19. package/dist/__tests__/phase1-verification.test.d.ts +2 -0
  20. package/dist/__tests__/phase1-verification.test.d.ts.map +1 -0
  21. package/dist/__tests__/phase1-verification.test.js +141 -0
  22. package/dist/__tests__/phase1-verification.test.js.map +1 -0
  23. package/dist/__tests__/phase2-verification.test.d.ts +2 -0
  24. package/dist/__tests__/phase2-verification.test.d.ts.map +1 -0
  25. package/dist/__tests__/phase2-verification.test.js +234 -0
  26. package/dist/__tests__/phase2-verification.test.js.map +1 -0
  27. package/dist/__tests__/phase3-verification.test.d.ts +2 -0
  28. package/dist/__tests__/phase3-verification.test.d.ts.map +1 -0
  29. package/dist/__tests__/phase3-verification.test.js +121 -0
  30. package/dist/__tests__/phase3-verification.test.js.map +1 -0
  31. package/dist/__tests__/phase4-verification.test.d.ts +2 -0
  32. package/dist/__tests__/phase4-verification.test.d.ts.map +1 -0
  33. package/dist/__tests__/phase4-verification.test.js +168 -0
  34. package/dist/__tests__/phase4-verification.test.js.map +1 -0
  35. package/dist/__tests__/phase5-verification.test.d.ts +2 -0
  36. package/dist/__tests__/phase5-verification.test.d.ts.map +1 -0
  37. package/dist/__tests__/phase5-verification.test.js +200 -0
  38. package/dist/__tests__/phase5-verification.test.js.map +1 -0
  39. package/dist/index.d.ts +245 -0
  40. package/dist/index.d.ts.map +1 -0
  41. package/dist/index.js +681 -0
  42. package/dist/index.js.map +1 -0
  43. package/dist/types/smart-resources.d.ts +219 -0
  44. package/dist/types/smart-resources.d.ts.map +1 -0
  45. package/dist/types/smart-resources.js +140 -0
  46. package/dist/types/smart-resources.js.map +1 -0
  47. package/package.json +69 -0
package/LICENSE ADDED
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+ MIT License
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+
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+ Copyright (c) 2024 Metriport Inc.
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+
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+ Permission is hereby granted, free of charge, to any person obtaining a copy
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+ of this software and associated documentation files (the "Software"), to deal
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+ in the Software without restriction, including without limitation the rights
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+ to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
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+ copies of the Software, and to permit persons to whom the Software is
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+ furnished to do so, subject to the following conditions:
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+
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+ The above copyright notice and this permission notice shall be included in all
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+ copies or substantial portions of the Software.
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+
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+ THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
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+ IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
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+ FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
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+ AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
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+ LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
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+ OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
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+ SOFTWARE.
package/README.md ADDED
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+ # @metriport/fhir-sdk
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+
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+ TypeScript SDK for parsing, querying, and manipulating FHIR R4 bundles with smart reference resolution.
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+
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+ ## Quick Start
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+
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+ ```typescript
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+ import { FhirBundleSdk } from "@metriport/fhir-sdk";
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+
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+ const sdk = await FhirBundleSdk.create(fhirBundle);
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+ ```
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+
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+ ## Core Functionality
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+
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+ ### 1. Resource Retrieval
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+
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+ #### By ID
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+
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+ ```typescript
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+ // Generic
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+ const resource = sdk.getResourceById<Patient>("patient-123");
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+
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+ // Type-specific
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+ const patient = sdk.getPatientById("patient-123");
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+ const observation = sdk.getObservationById("obs-456");
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+ ```
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+
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+ #### By Type
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+
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+ ```typescript
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+ const patients = sdk.getPatients();
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+ const observations = sdk.getObservations();
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+ const encounters = sdk.getEncounters();
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+ const conditions = sdk.getConditions();
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+ ```
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+
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+ ### 2. Smart Reference Resolution
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+
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+ Resources include typed getter methods for convenient and type-safe reference traversal:
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+
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+ ```typescript
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+ const observation = sdk.getObservationById("obs-123");
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+
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+ // Direct access to referenced resources
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+ const patient = observation.getSubject<Patient>();
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+ ```
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+
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+ ### 3. Bundle Export
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+
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+ You can export subsets of your bundle or export by resource type to quickly create custom bundles.
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+
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+ ```typescript
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+ // Export by resource IDs - great for diff bundles!
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+ const subset = sdk.exportSubset(["patient-uuid-1", "obs-uuid-1"]);
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+
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+ // Export by resource type - great for resource type bundles!
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+ const observationBundle = sdk.exportByType("Observation");
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+ ```
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+
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+ ### 4. Validation
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+
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+ Validate your bundle to ensure there are no broken references. A broken reference is a reference that points to a resource that does not exist in the bundle.
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+
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+ ```typescript
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+ const result = sdk.lookForBrokenReferences();
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+ console.log(result.hasBrokenReferences); // true if at least one broken reference is found, false otherwise
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+ console.log(result.brokenReferences); // All broken references in bundle
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+ ```
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+
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+ ## Example Use Cases
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+
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+ ### Patient Summary
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+
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+ ```typescript
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+ const buildPatientSummary = (patientId: string) => {
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+ const patient = sdk.getPatientById(patientId);
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+ const observations = sdk.getObservations().filter(obs => obs.getSubject()?.id === patientId);
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+
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+ return {
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+ name: patient?.name?.[0]?.family,
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+ observationCount: observations.length,
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+ recentObs: observations.slice(0, 5),
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+ };
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+ };
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+ ```
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+
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+ ### Reference Traversal
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+
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+ ```typescript
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+ // Traverse multiple references in sequence
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+ const orgName = sdk.getPatients()[0]?.getManagingOrganization()?.name;
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+ ```
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+
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+ ### Example Use Case: Processing a bundle
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+
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+ ```typescript
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+ const processBundle = async (bundle: Bundle) => {
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+ const sdk = await FhirBundleSdk.create(bundle);
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+
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+ const { hasBrokenReferences, brokenReferences } = sdk.lookForBrokenReferences();
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+
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+ if (hasBrokenReferences) {
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+ throw new MetriportError("Broken references found in bundle", {
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+ brokenReferences,
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+ });
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+ }
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+
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+ // Process
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+ const patients = sdk.getPatients();
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+ const summaries = patients.map(p => ({
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+ id: p.id,
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+ name: p.name?.[0]?.family,
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+ obsCount: sdk.getObservations().filter(obs => obs.getSubject()?.id === p.id).length,
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+ }));
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+
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+ return summaries;
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+ };
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+ ```
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+
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+ ## Performance
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+
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+ - **getById**: O(1) lookup
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+ - **getByType**: O(n) where n = resources of that type
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+ - **Reference resolution**: O(1) traversal
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+ export {};
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+ //# sourceMappingURL=env-setup.d.ts.map
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+ {"version":3,"file":"env-setup.d.ts","sourceRoot":"","sources":["../../src/__tests__/env-setup.ts"],"names":[],"mappings":""}
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+ "use strict";
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+ var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
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+ if (k2 === undefined) k2 = k;
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+ var desc = Object.getOwnPropertyDescriptor(m, k);
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+ if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
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+ desc = { enumerable: true, get: function() { return m[k]; } };
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+ }
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+ Object.defineProperty(o, k2, desc);
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+ }) : (function(o, m, k, k2) {
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+ if (k2 === undefined) k2 = k;
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+ o[k2] = m[k];
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+ }));
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+ var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
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+ Object.defineProperty(o, "default", { enumerable: true, value: v });
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+ }) : function(o, v) {
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+ o["default"] = v;
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+ });
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+ var __importStar = (this && this.__importStar) || function (mod) {
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+ if (mod && mod.__esModule) return mod;
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+ var result = {};
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+ if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
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+ __setModuleDefault(result, mod);
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+ return result;
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+ };
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+ var __importDefault = (this && this.__importDefault) || function (mod) {
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+ return (mod && mod.__esModule) ? mod : { "default": mod };
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+ };
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+ Object.defineProperty(exports, "__esModule", { value: true });
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+ const dotenv = __importStar(require("dotenv"));
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+ const path_1 = __importDefault(require("path"));
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+ const cwd = process.cwd();
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+ const paths = [cwd, ...(cwd.includes("packages") ? [] : ["packages", "fhir-sdk"])];
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+ // regular config so it can load .env if present
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+ dotenv.config({ path: path_1.default.resolve(...paths, ".env") });
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+ dotenv.config({ path: path_1.default.resolve(...paths, ".env.test") });
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+ // Keep dotenv import and config before everything else
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+ //# sourceMappingURL=env-setup.js.map
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+ export {};
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+ //# sourceMappingURL=fhir-bundle-sdk-basic.test.d.ts.map
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+ {"version":3,"file":"fhir-bundle-sdk-basic.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/fhir-bundle-sdk-basic.test.ts"],"names":[],"mappings":""}
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+ "use strict";
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+ Object.defineProperty(exports, "__esModule", { value: true });
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+ const index_1 = require("../index");
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+ const fhir_bundles_1 = require("./fixtures/fhir-bundles");
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+ describe("FhirBundleSdk - Basic TDD Tests", () => {
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+ describe("Bundle Loading and Initialization", () => {
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+ describe("FR-1.1: SDK constructor accepts a FHIR Bundle object", () => {
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+ it("should accept a valid FHIR bundle without throwing", async () => {
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+ await expect(index_1.FhirBundleSdk.create(fhir_bundles_1.validCompleteBundle)).resolves.not.toThrow();
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+ });
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+ });
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+ describe("FR-1.2: SDK constructor throws error if bundle.resourceType !== 'Bundle'", () => {
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+ it("should throw error for invalid resourceType", async () => {
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+ await expect(index_1.FhirBundleSdk.create(fhir_bundles_1.invalidBundleWrongType)).rejects.toThrow("Invalid bundle: resourceType must be 'Bundle'");
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+ });
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+ });
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+ });
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+ });
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+ //# sourceMappingURL=fhir-bundle-sdk-basic.test.js.map
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+ {"version":3,"file":"fhir-bundle-sdk-basic.test.js","sourceRoot":"","sources":["../../src/__tests__/fhir-bundle-sdk-basic.test.ts"],"names":[],"mappings":";;AAAA,oCAAyC;AACzC,0DAAsF;AAEtF,QAAQ,CAAC,iCAAiC,EAAE,GAAG,EAAE;IAC/C,QAAQ,CAAC,mCAAmC,EAAE,GAAG,EAAE;QACjD,QAAQ,CAAC,sDAAsD,EAAE,GAAG,EAAE;YACpE,EAAE,CAAC,oDAAoD,EAAE,KAAK,IAAI,EAAE;gBAClE,MAAM,MAAM,CAAC,qBAAa,CAAC,MAAM,CAAC,kCAAmB,CAAC,CAAC,CAAC,QAAQ,CAAC,GAAG,CAAC,OAAO,EAAE,CAAC;YACjF,CAAC,CAAC,CAAC;QACL,CAAC,CAAC,CAAC;QAEH,QAAQ,CAAC,0EAA0E,EAAE,GAAG,EAAE;YACxF,EAAE,CAAC,6CAA6C,EAAE,KAAK,IAAI,EAAE;gBAC3D,MAAM,MAAM,CAAC,qBAAa,CAAC,MAAM,CAAC,qCAAsB,CAAC,CAAC,CAAC,OAAO,CAAC,OAAO,CACxE,+CAA+C,CAChD,CAAC;YACJ,CAAC,CAAC,CAAC;QACL,CAAC,CAAC,CAAC;IACL,CAAC,CAAC,CAAC;AACL,CAAC,CAAC,CAAC"}
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+ export {};
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+ //# sourceMappingURL=fhir-bundle-sdk.test.d.ts.map
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+ {"version":3,"file":"fhir-bundle-sdk.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/fhir-bundle-sdk.test.ts"],"names":[],"mappings":""}