@memoarchitect/tools 0.4.4

package/packages/tools/lib/bin/memo.js

@@ -0,0 +1,461 @@
+#!/usr/bin/env node
+// ─── MEMO CLI Entry Point ────────────────────────────────────────────────────
+//
+// Commands:
+//   memo validate       — Validate model against closure rules
+//   memo init           — Scaffold a new project
+//   memo pack           — Package the model as a KPAR archive
+//   memo export json    — Export model as JSON
+//   memo export dot     — Export model as Graphviz DOT
+//   memo ontology show  — Show resolved ontology summary
+//   memo ontology export— Export ontology as OWL/RDF or a SysAnd project
+//   memo check          — Check model compatibility (--sysml-compat)
+//   memo round-trip     — Predict round-trip conformance with external tools
+// ─────────────────────────────────────────────────────────────────────────────
+import { Command } from 'commander';
+import { validateCommand } from '../commands/validate.js';
+import { initCommand } from '../commands/init.js';
+import { packCommand } from '../commands/pack.js';
+import { exportJsonCommand, exportDotCommand } from '../commands/export.js';
+import { exportDhfCommand, dhfStatusCommand, dhfSnapshotCommand, dhfDiffCommand, dhfRedlineCommand, dhfReviewPacketCommand, } from '../commands/dhf.js';
+import { ontologyShowCommand, ontologyExportOwlCommand, ontologyExportSysandCommand, ontologyAddKindCommand, } from '../commands/ontology.js';
+import { importCsvCommand, importRelCsvCommand, importTemplateCommand, importDiffCommand } from '../commands/import.js';
+import { importEaCommand, importCameoCommand } from '../commands/import-ea.js';
+import { importSysandCommand } from '../commands/import-sysand.js';
+import { importOwlCommand } from '../commands/import-owl.js';
+import { sysandPublishCommand } from '../commands/sysand-publish.js';
+import { lockCommand } from '../commands/lock.js';
+import { installCommand } from '../commands/install.js';
+import { createPackageCommand } from '../commands/create-package.js';
+import { askCommand } from '../commands/ask.js';
+import { generateCommand } from '../commands/generate.js';
+import { dhfDraftCommand } from '../commands/dhf-draft.js';
+import { dhfInitCommand } from '../commands/dhf-init.js';
+import { dhfPreviewCommand } from '../commands/dhf-preview.js';
+import { pluginListCommand, pluginCreateCommand, pluginRunCommand } from '../commands/plugin.js';
+import { reqNewCommand } from '../commands/req.js';
+import { checkCommand } from '../commands/check.js';
+import { roundTripCommand } from '../commands/roundtrip.js';
+import { rulesListCommand, rulesCheckCommand, rulesExplainCommand, rulesCoverageCommand } from '../commands/rules.js';
+const program = new Command();
+program
+    .name('memo')
+    .description('MEMO — Model-Based Systems Engineering for Medical Devices')
+    .version('0.4.4');
+program
+    .command('validate')
+    .description('Validate the model against closure rules and show completeness')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--format <format>', 'Output format: text, junit, json', 'text')
+    .option('-o, --output <file>', 'Write output to file instead of stdout')
+    .action(async (dir, opts) => {
+    await validateCommand(dir, { format: opts.format, output: opts.output });
+});
+program
+    .command('init')
+    .description('Scaffold a new MEMO project')
+    .argument('[name]', 'Project directory (omit or "." to initialize the current directory)')
+    .option('-t, --template <template>', 'Template to use')
+    .option('--ontology <package>', 'Logical ontology package to use (defaults from the content manifest)')
+    .option('--archetype <id>', 'Device archetype declared by the content manifest')
+    .option('--example <id>', 'Create from an example project (e.g. gpca)')
+    .option('--from-example <id>', 'Alias for --example')
+    .option('--list-ontologies', 'List available ontology packages and archetypes')
+    .action(async (name, options) => {
+    await initCommand(name, options);
+});
+program
+    .command('pack')
+    .description('Package the model as a Knowledge Package Archive (KPAR)')
+    .option('-o, --output <file>', 'Output .kpar path')
+    .action(async (options) => {
+    await packCommand(options);
+});
+const exportCmd = program
+    .command('export')
+    .description('Export model to various formats');
+exportCmd
+    .command('json')
+    .description('Export full model as JSON')
+    .option('-o, --output <file>', 'Output file path', 'memo-model.json')
+    .option('--no-pretty', 'Minified JSON output')
+    .action(async (options) => {
+    await exportJsonCommand(options);
+});
+exportCmd
+    .command('dhf')
+    .description('Export DHF documents (HTML, Markdown, DOCX)')
+    .option('-o, --output <dir>', 'Output directory', 'dhf-output')
+    .option('-t, --target <id>', 'Target document ID (e.g., rmp, har, fmea)')
+    .option('-f, --format <fmt>', 'Output format: html, md, docx', 'html')
+    .option('-g, --group <group>', 'Document group: risk, design, verification, compliance, all')
+    .action(async (options) => {
+    await exportDhfCommand(options);
+});
+exportCmd
+    .command('dot')
+    .description('Export model as Graphviz DOT format')
+    .option('-o, --output <file>', 'Output file path', 'memo-model.dot')
+    .option('--viewpoint <id>', 'Filter by viewpoint ID')
+    .action(async (options) => {
+    await exportDotCommand(options);
+});
+program
+    .command('create-package')
+    .description('Scaffold a new MEMO package (ontology, profile, or library)')
+    .argument('<name>', 'Package name (e.g., @myorg/cardiac-ontology)')
+    .option('-t, --type <type>', 'Package type: ontology, profile, library, device', 'ontology')
+    .option('-e, --extends <package>', 'Package to extend (auto-set for profiles)')
+    .option('-d, --description <desc>', 'Package description')
+    .option('--author <author>', 'Package author')
+    .option('--license <license>', 'License', 'Apache-2.0')
+    .option('-o, --output <dir>', 'Output base directory', '.')
+    .action(async (name, options) => {
+    await createPackageCommand(name, options);
+});
+program
+    .command('install')
+    .description('Install locked MEMO content, or add a package from git, npm, or a local path')
+    .argument('[source]', 'Optional package source: git URL, npm package name, or local path')
+    .option('--mode <mode>', 'Force install mode: git, npm, or local')
+    .action(async (source, options) => {
+    await installCommand(source, options);
+});
+program
+    .command('lock')
+    .description('Regenerate memo.lock.yaml from the current ontology')
+    .action(async () => {
+    await lockCommand();
+});
+// ─── memo ontology ──────────────────────────────────────────────────────────
+const ontologyCmd = program
+    .command('ontology')
+    .description('Ontology management commands');
+ontologyCmd
+    .command('show')
+    .description('Show resolved ontology summary (kinds, relationships, rules)')
+    .action(async () => {
+    await ontologyShowCommand();
+});
+const ontologyExportCmd = ontologyCmd
+    .command('export')
+    .description('Export ontology to standard formats');
+ontologyExportCmd
+    .command('owl')
+    .description('Export ontology as OWL/RDF (Turtle)')
+    .option('-o, --output <file>', 'Output file path')
+    .option('--namespace <uri>', 'Ontology namespace URI', 'https://sysand.dev/ontology/memo#')
+    .action(async (options) => {
+    await ontologyExportOwlCommand({ ...options, format: 'turtle' });
+});
+ontologyExportCmd
+    .command('xml')
+    .description('Export ontology as OWL/RDF (XML)')
+    .option('-o, --output <file>', 'Output file path')
+    .option('--namespace <uri>', 'Ontology namespace URI', 'https://sysand.dev/ontology/memo#')
+    .action(async (options) => {
+    await ontologyExportOwlCommand({ ...options, format: 'xml' });
+});
+ontologyExportCmd
+    .command('sysand')
+    .description('Export ontology dependency stack as a SysAnd project')
+    .option('-o, --output <dir>', 'Output directory path')
+    .action(async (options) => {
+    await ontologyExportSysandCommand(options);
+});
+ontologyCmd
+    .command('add-kind <name>')
+    .description('Write a new SysML kind definition file into the local ontology folder')
+    .requiredOption('-l, --layer <layer>', 'Ontology layer path (e.g. requirements, architecture/risk)')
+    .option('-o, --output <dir>', 'Override output directory (default: ontology/<layer>)')
+    .action((name, options) => {
+    ontologyAddKindCommand(name, options);
+});
+// ─── memo import ──────────────────────────────────────────────────────────
+const importCmd = program
+    .command('import')
+    .description('Import models from CSV, Sparx EA, Cameo, SysAnd, or OWL/JSON-LD');
+importCmd
+    .command('csv')
+    .description('Import elements from a CSV file (generates .sysml)')
+    .argument('<file>', 'CSV file path')
+    .option('-o, --output <file>', 'Output .sysml file path')
+    .option('--package <name>', 'SysML package name')
+    .option('--dry-run', 'Preview generated SysML without writing')
+    .action(async (file, options) => {
+    await importCsvCommand(file, options);
+});
+importCmd
+    .command('csv-rel')
+    .description('Import relationships from a CSV file (generates .sysml)')
+    .argument('<file>', 'CSV file path')
+    .option('-o, --output <file>', 'Output .sysml file path')
+    .option('--package <name>', 'SysML package name')
+    .option('--dry-run', 'Preview generated SysML without writing')
+    .action(async (file, options) => {
+    await importRelCsvCommand(file, options);
+});
+importCmd
+    .command('template')
+    .description('Generate a template CSV based on the ontology (elements or relationships)')
+    .argument('<type>', 'Template type: "elements" or "relationships"')
+    .option('-o, --output <file>', 'Output CSV file path')
+    .action(async (type, options) => {
+    await importTemplateCommand(type, options);
+});
+importCmd
+    .command('diff')
+    .description('Preview what a CSV import would change without modifying the model')
+    .argument('<file>', 'CSV file path')
+    .option('--detect-removals', 'Also report elements in the model missing from the CSV')
+    .action(async (file, options) => {
+    await importDiffCommand(file, options);
+});
+importCmd
+    .command('ea')
+    .description('Import from Sparx EA JSON export (.json)')
+    .argument('<file>', 'EA JSON export file')
+    .option('-o, --output <file>', 'Output .sysml file path')
+    .option('--package <name>', 'SysML package name')
+    .option('--dry-run', 'Preview generated SysML without writing')
+    .action(async (file, options) => {
+    await importEaCommand(file, options);
+});
+importCmd
+    .command('cameo')
+    .description('Import from MagicDraw/Cameo XMI or JSON (.xml/.json)')
+    .argument('<file>', 'Cameo XMI/XML or JSON file')
+    .option('-o, --output <file>', 'Output .sysml file path')
+    .option('--package <name>', 'SysML package name')
+    .option('--dry-run', 'Preview generated SysML without writing')
+    .action(async (file, options) => {
+    await importCameoCommand(file, options);
+});
+importCmd
+    .command('sysand')
+    .description('Import a SysAnd project directory (.project.json + SysML files)')
+    .argument('<dir>', 'SysAnd project directory')
+    .option('--verify', 'Verify round-trip against current ontology')
+    .action(async (dir, options) => {
+    await importSysandCommand(dir, options);
+});
+importCmd
+    .command('owl')
+    .description('Import an OWL/Turtle or JSON-LD ontology')
+    .argument('<file>', 'OWL/Turtle (.ttl/.owl) or JSON-LD (.jsonld/.json) file')
+    .option('-o, --output <file>', 'Output .sysml file path')
+    .option('--package <name>', 'SysML package name')
+    .option('--package-dir <dir>', 'Create full ontology package directory')
+    .option('--dry-run', 'Preview generated SysML without writing')
+    .action(async (file, options) => {
+    await importOwlCommand(file, options);
+});
+// ─── memo ask ────────────────────────────────────────────────────────────────
+program
+    .command('ask')
+    .description('Ask a question about the model using LLM')
+    .argument('<question>', 'Natural language question about the model')
+    .option('--layer <layer>', 'Filter context to a specific layer')
+    .option('--kind <kind>', 'Filter context to a specific kind')
+    .action(async (question, options) => {
+    await askCommand(question, options);
+});
+// ─── memo generate ───────────────────────────────────────────────────────────
+program
+    .command('generate')
+    .description('Generate SysML from a natural language description using LLM')
+    .argument('<description>', 'Natural language description of what to generate')
+    .option('-o, --output <file>', 'Output .sysml file path (preview if omitted)')
+    .option('--dry-run', 'Preview generated SysML without writing')
+    .action(async (description, options) => {
+    await generateCommand(description, options);
+});
+// ─── memo req ────────────────────────────────────────────────────────────────
+const reqCmd = program
+    .command('req')
+    .description('Requirement authoring helpers');
+reqCmd
+    .command('new')
+    .description('Generate a requirement stub from an EARS template')
+    .requiredOption('-t, --template <template>', 'Template: ubi, event, state, opt, unwanted')
+    .option('-o, --output <file>', 'Write stub to file (stdout if omitted)')
+    .option('--id <reqId>', 'Requirement ID', 'REQ-001')
+    .option('--title <title>', 'Requirement title', 'New Requirement')
+    .action(async (options) => {
+    await reqNewCommand({
+        template: options.template,
+        output: options.output,
+        id: options.id,
+        title: options.title,
+    });
+});
+// ─── memo plugin ─────────────────────────────────────────────────────────────
+const pluginCmd = program
+    .command('plugin')
+    .description('Plugin management commands');
+pluginCmd
+    .command('list')
+    .description('List configured plugins')
+    .action(async () => {
+    await pluginListCommand();
+});
+pluginCmd
+    .command('create')
+    .description('Scaffold a new plugin')
+    .argument('<name>', 'Plugin name')
+    .option('-t, --type <type>', 'Plugin type: export, analysis, validation, generator', 'export')
+    .option('-d, --description <desc>', 'Plugin description')
+    .option('-o, --output <dir>', 'Output directory')
+    .action(async (name, options) => {
+    await pluginCreateCommand(name, options);
+});
+pluginCmd
+    .command('run')
+    .description('Run a generator or analysis plugin')
+    .argument('<id>', 'Plugin ID')
+    .option('--json', 'Output results as JSON')
+    .action(async (id, options) => {
+    await pluginRunCommand(id, options);
+});
+// ─── memo dhf ────────────────────────────────────────────────────────────────
+const dhfCmd = program
+    .command('dhf')
+    .description('Design History File workbench');
+dhfCmd
+    .command('init')
+    .description('Scaffold DHF document set for your medical device project (interactive wizard)')
+    .option('-d, --dir <path>', 'Project directory', '.')
+    .action(async (options) => {
+    await dhfInitCommand({ projectDir: options.dir });
+});
+dhfCmd
+    .command('preview')
+    .description('Start local DHF preview server with live reload')
+    .option('-p, --port <port>', 'Server port', '3001')
+    .action(async (options) => {
+    await dhfPreviewCommand({ port: parseInt(options.port, 10) });
+});
+dhfCmd
+    .command('status')
+    .description('Show DHF document readiness status')
+    .option('-v, --verbose', 'Show section-level detail')
+    .option('-t, --target <id>', 'Target document ID')
+    .action(async (options) => {
+    await dhfStatusCommand(options);
+});
+dhfCmd
+    .command('snapshot')
+    .description('Create a snapshot of current DHF document state')
+    .option('-t, --target <id>', 'Target document ID (default: all)')
+    .option('-l, --label <label>', 'Snapshot label')
+    .action(async (options) => {
+    await dhfSnapshotCommand(options);
+});
+dhfCmd
+    .command('diff')
+    .description('Compare current state against latest snapshot')
+    .requiredOption('-t, --target <id>', 'Target document ID')
+    .action(async (options) => {
+    await dhfDiffCommand(options);
+});
+dhfCmd
+    .command('redline')
+    .description('Generate redline document showing changes from last snapshot')
+    .requiredOption('-t, --target <id>', 'Target document ID')
+    .option('-f, --format <fmt>', 'Output format: html, md, docx', 'html')
+    .option('-o, --output <file>', 'Output file path')
+    .action(async (options) => {
+    await dhfRedlineCommand(options);
+});
+dhfCmd
+    .command('draft')
+    .description('Use LLM to draft content for gap sections in a DHF document')
+    .requiredOption('-t, --target <id>', 'Target document ID (e.g., rmp, har, fmea)')
+    .option('-s, --section <id>', 'Draft only a specific section')
+    .option('-f, --format <fmt>', 'Output format: html, md, docx', 'html')
+    .option('-o, --output <dir>', 'Output directory', 'dhf-drafts')
+    .action(async (options) => {
+    await dhfDraftCommand(options);
+});
+dhfCmd
+    .command('review-packet')
+    .description('Generate a complete review packet of all DHF documents')
+    .option('-f, --format <fmt>', 'Output format: html, md, docx', 'html')
+    .option('-o, --output <dir>', 'Output directory')
+    .action(async (options) => {
+    await dhfReviewPacketCommand(options);
+});
+// ─── memo sysand ────────────────────────────────────────────────────────────
+const sysandCmd = program
+    .command('sysand')
+    .description('SysAnd tool interop commands');
+sysandCmd
+    .command('publish')
+    .description('Validate and package ontology for SysAnd registry publication')
+    .option('--dry-run', 'Validate without writing artifacts (default)')
+    .option('-p, --package <name>', 'Publish a specific package from the config chain')
+    .action(async (options) => {
+    await sysandPublishCommand({ ...options, dryRun: options.dryRun ?? true });
+});
+// ─── memo check ─────────────────────────────────────────────────────────────
+program
+    .command('check')
+    .description('Check model compatibility with SysML v2 tools')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--sysml-compat', 'Run SysML v2 standard compatibility check')
+    .option('--format <format>', 'Output format: text, json', 'text')
+    .option('-o, --output <file>', 'Write report to file instead of stdout')
+    .action(async (dir, opts) => {
+    await checkCommand(dir, { sysmlCompat: opts.sysmlCompat, format: opts.format, output: opts.output });
+});
+// ─── memo round-trip ────────────────────────────────────────────────────────
+program
+    .command('round-trip')
+    .description('Predict round-trip conformance with external SysML tools')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--tool <tool>', 'Target tool: syson, syside, cameo', 'syson')
+    .option('--format <format>', 'Output format: text, json', 'text')
+    .option('-o, --output <file>', 'Write report to file instead of stdout')
+    .action(async (dir, opts) => {
+    await roundTripCommand(dir, { tool: opts.tool, format: opts.format, output: opts.output });
+});
+// ─── memo rules ────────────────────────────────────────────────────────────
+const rulesCmd = program
+    .command('rules')
+    .description('Consistency rule management');
+rulesCmd
+    .command('list')
+    .description('List all consistency rules')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--format <format>', 'Output format: text, json', 'text')
+    .option('--category <category>', 'Filter by category: closure, coverage, lifecycle, crossLayer, quantitative')
+    .action(async (dir, opts) => {
+    await rulesListCommand(dir, { format: opts.format, category: opts.category });
+});
+rulesCmd
+    .command('check')
+    .description('Evaluate rules against the current model')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--format <format>', 'Output format: text, json', 'text')
+    .action(async (dir, opts) => {
+    await rulesCheckCommand(dir, { format: opts.format });
+});
+rulesCmd
+    .command('explain')
+    .description('Show detailed info for a specific rule')
+    .argument('<ruleId>', 'Rule ID (e.g., CR-MED-001)')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--format <format>', 'Output format: text, json', 'text')
+    .action(async (ruleId, dir, opts) => {
+    await rulesExplainCommand(ruleId, dir, { format: opts.format });
+});
+rulesCmd
+    .command('coverage')
+    .description('Show coverage rules grouped by regulatory standard')
+    .argument('[dir]', 'Project directory', '.')
+    .option('--format <format>', 'Output format: text, json', 'text')
+    .action(async (dir, opts) => {
+    await rulesCoverageCommand(dir, { format: opts.format });
+});
+program.parse();
+//# sourceMappingURL=memo.js.map

package/packages/tools/lib/bin/memo.js.map

@@ -0,0 +1 @@
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package/packages/tools/lib/browser/index.d.ts

@@ -0,0 +1,13 @@
+export * from '../model/semantic.js';
+export * from '../model/view-deriver.js';
+export * from '../model/view-kinds.js';
+export * from '../model/dimension-filter.js';
+export * from '../analysis/dsm.js';
+export * from '../analysis/impact.js';
+export * from '../import/recipes.js';
+export * from '../import/column-mapper.js';
+export type * from '../validator/types.js';
+export type * from '../protocol/messages.js';
+export type { MethodologyDescriptor } from '../model/methodology-loader.js';
+export type { OntologyPackageInfo } from '../model/ontology-loader.js';
+//# sourceMappingURL=index.d.ts.map

package/packages/tools/lib/browser/index.d.ts.map

@@ -0,0 +1 @@
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package/packages/tools/lib/browser/index.js

@@ -0,0 +1,11 @@
+// Browser-safe @memoarchitect/tools surface. Keep this entrypoint free of parser,
+// filesystem, server, and other Node-only dependencies.
+export * from '../model/semantic.js';
+export * from '../model/view-deriver.js';
+export * from '../model/view-kinds.js';
+export * from '../model/dimension-filter.js';
+export * from '../analysis/dsm.js';
+export * from '../analysis/impact.js';
+export * from '../import/recipes.js';
+export * from '../import/column-mapper.js';
+//# sourceMappingURL=index.js.map

package/packages/tools/lib/browser/index.js.map

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package/packages/tools/lib/commands/archetype-loader.d.ts

@@ -0,0 +1,15 @@
+import { type LoadedMemoManifest } from '@memoarchitect/tools';
+export interface ArchetypeInfo {
+    id: string;
+    label: string;
+    description: string;
+    category: string;
+    templateDir: string;
+    includedLayers: string[];
+    includedStandards: string[];
+}
+export declare function loadArchetypes(fromDir: string, selected?: LoadedMemoManifest): Promise<ArchetypeInfo[]>;
+export declare function findArchetype(archetypes: ArchetypeInfo[], id: string): ArchetypeInfo | undefined;
+export declare function deviceClassArchetypes(archetypes: ArchetypeInfo[]): ArchetypeInfo[];
+export declare function profileArchetypes(archetypes: ArchetypeInfo[]): ArchetypeInfo[];
+//# sourceMappingURL=archetype-loader.d.ts.map

package/packages/tools/lib/commands/archetype-loader.d.ts.map

@@ -0,0 +1 @@
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package/packages/tools/lib/commands/archetype-loader.js

@@ -0,0 +1,31 @@
+import { readFileSync } from 'node:fs';
+import { parse as parseYaml } from 'yaml';
+import { findMemoManifests, resolveManifestPath } from '@memoarchitect/tools';
+export async function loadArchetypes(fromDir, selected) {
+    const loaded = selected ?? findMemoManifests(fromDir)[0];
+    if (!loaded)
+        return [];
+    const path = resolveManifestPath(loaded, loaded.manifest.init.archetypes);
+    const parsed = parseYaml(readFileSync(path, 'utf-8'));
+    if (!Array.isArray(parsed?.archetypes))
+        throw new Error(`Invalid archetype catalog: ${path}`);
+    return parsed.archetypes.map((entry) => ({
+        id: String(entry.id ?? ''),
+        label: String(entry.label ?? entry.id ?? ''),
+        description: String(entry.description ?? ''),
+        category: String(entry.category ?? 'device-class'),
+        templateDir: String(entry.templateDir ?? ''),
+        includedLayers: Array.isArray(entry.includedLayers) ? entry.includedLayers.map(String) : [],
+        includedStandards: Array.isArray(entry.includedStandards) ? entry.includedStandards.map(String) : [],
+    })).filter((entry) => entry.id !== '');
+}
+export function findArchetype(archetypes, id) {
+    return archetypes.find(archetype => archetype.id === id);
+}
+export function deviceClassArchetypes(archetypes) {
+    return archetypes.filter(archetype => archetype.category === 'device-class');
+}
+export function profileArchetypes(archetypes) {
+    return archetypes.filter(archetype => archetype.category === 'profile');
+}
+//# sourceMappingURL=archetype-loader.js.map

package/packages/tools/lib/commands/archetype-loader.js.map

@@ -0,0 +1 @@
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package/packages/tools/lib/commands/ask.d.ts

@@ -0,0 +1,6 @@
+export interface AskCommandOptions {
+    layer?: string;
+    kind?: string;
+}
+export declare function askCommand(question: string, options: AskCommandOptions): Promise<void>;
+//# sourceMappingURL=ask.d.ts.map

package/packages/tools/lib/commands/ask.d.ts.map

@@ -0,0 +1 @@
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