@memoarchitect/tools 0.4.4

package/LICENSE

@@ -0,0 +1,21 @@
+MIT License
+
+Copyright (c) 2026 memoarchitect
+
+Permission is hereby granted, free of charge, to any person obtaining a copy
+of this software and associated documentation files (the "Software"), to deal
+in the Software without restriction, including without limitation the rights
+to use, copy, modify, merge, publish, distribute, sublicense, and/or sell
+copies of the Software, and to permit persons to whom the Software is
+furnished to do so, subject to the following conditions:
+
+The above copyright notice and this permission notice shall be included in all
+copies or substantial portions of the Software.
+
+THE SOFTWARE IS PROVIDED "AS IS", WITHOUT WARRANTY OF ANY KIND, EXPRESS OR
+IMPLIED, INCLUDING BUT NOT LIMITED TO THE WARRANTIES OF MERCHANTABILITY,
+FITNESS FOR A PARTICULAR PURPOSE AND NONINFRINGEMENT. IN NO EVENT SHALL THE
+AUTHORS OR COPYRIGHT HOLDERS BE LIABLE FOR ANY CLAIM, DAMAGES OR OTHER
+LIABILITY, WHETHER IN AN ACTION OF CONTRACT, TORT OR OTHERWISE, ARISING FROM,
+OUT OF OR IN CONNECTION WITH THE SOFTWARE OR THE USE OR OTHER DEALINGS IN THE
+SOFTWARE.

package/README.md

@@ -0,0 +1,171 @@
+<p align="center">
+  <strong>meMO Tools</strong><br>
+  <em>Model engine + CLI for the Medical Engineering Modelling Ontology</em>
+</p>
+
+<p align="center">
+  Parse text-first SysML v2 into a semantic graph, run closure and consistency
+  checks, and generate assurance views — <code>memo validate</code> in CI.
+</p>
+
+<p align="center">
+  <code>memo-tools 0.4.4</code> &middot; MIT &middot; SysML v2 &middot; ISO 14971 &middot; IEC 62304 &middot; ISO/IEC/IEEE 42010
+</p>
+
+---
+
+> **Status: work in progress.** meMO Tools is in the initial stages of
+> development and is not yet ready for release. APIs, CLI flags, and model
+> semantics may change without notice.
+
+## Version compatibility
+
+`memo`, `memo-tools`, and `memo-architect` share a `MAJOR.MINOR` compatibility
+line. Any `0.4.x` release is intended to work with the other `0.4.x` products;
+patch versions may advance independently for fixes and additive changes.
+
+## The meMO stack
+
+meMO is a four-layer stack — adopt what you need
+(see [memoarchitect.com](https://memoarchitect.com)):
+
+| Layer | What | Where |
+|---|---|---|
+| 01 Ontology | Typed SysML v2 elements, Arcadia-inspired architecture layers | [memoarchitect/memo](https://github.com/memoarchitect/memo) |
+| 02 Methodology | Profiles, viewpoints, rules, workflow gates | [memoarchitect/memo](https://github.com/memoarchitect/memo) |
+| **03 Tools** | **Model engine + `memo` CLI — this repo** | memoarchitect/memo-tools |
+| 04 Architect | Web workbench over the same model | [memoarchitect/memo-architect](https://github.com/memoarchitect/memo-architect) |
+
+## Supported tools
+
+Memo Tools is one npm package with internal engine, CLI, and maintainer-tool
+modules. The UI lives in Memo Architect; editor functionality belongs to a
+user's SysML v2 editor rather than a MEMO-specific VS Code extension.
+
+| Surface | Purpose | Typical use |
+|---|---|---|
+| `@memoarchitect/tools` | Parser, semantic model, validation, analysis, project operations, document tooling, and the `memo` CLI | Reused by the CLI and Memo Architect server |
+| `tools/ontology-tools` | Internal dependency-free repository checks (not an npm package) | Maintainers validating ontology structure and editor portability |
+
+### CLI usage
+
+```bash
+# Create and inspect a project
+memo init my-device
+memo ontology show
+
+# Validate locally or in CI
+memo validate .
+memo validate . --format junit --output validation.xml
+
+# Exchange and publish model data
+memo export json --output model.json
+memo export dot --output model.dot
+memo import csv elements.csv
+memo ontology export owl --output ontology.ttl
+memo pack --output model.kpar
+memo sysand publish --dry-run
+
+# Generate assurance artifacts
+memo dhf status
+memo export dhf --format docx --output dhf-output
+memo rules coverage
+```
+
+Run `memo --help` or `memo <command> --help` for the complete command surface.
+
+## Documentation
+
+The [task-oriented documentation](docs/index.md) starts with installation and a
+first useful workflow, then covers validation, import, export, CI, configuration,
+and the library API. Build it locally with:
+
+```bash
+python3 -m pip install "mkdocs>=1.6" "mkdocs-material>=9.5" "pymdown-extensions>=10.0"
+pnpm run docs:build
+```
+
+### Compiler and packager selection
+
+Projects may select external tools in `memo.package.yaml` or
+`memo.config.yaml`. Omit `toolchain` (or use `internal`) to preserve MEMO's
+built-in parser and KPAR writer.
+
+```yaml
+toolchain:
+  compiler: syside       # internal | syside
+  packager: sysand       # internal | sysand
+  syside:
+    executable: ~/.local/bin/syside
+    configFile: ./syside.toml
+    warningsAsErrors: true  # default: true
+    diagnose: all           # default: all; all | external | project | none
+  sysand:
+    executable: ~/.local/bin/sysand
+    configFile: ./sysand.toml
+```
+
+`memo validate` and `memo pack` run `syside check --diagnose all
+--warnings-as-errors` by default before MEMO's semantic validation, automatically
+including the resolved ontology directories. Set `warningsAsErrors: false` or use
+`diagnose: none` to relax the check. `memo pack` delegates
+archive creation to SysAnd when selected. Relative executable and config paths
+resolve from the project directory; bare executable names resolve through `PATH`.
+
+### Core library usage
+
+`@memoarchitect/tools` is the reusable implementation layer. Protocol DTOs expose its
+supported application boundary; the CLI is an adapter over that boundary, and
+React does not import core internals directly.
+
+```ts
+import { buildMemoModel } from '@memoarchitect/tools';
+```
+
+The API is pre-stable. Pin an exact `0.4.x` patch when embedding it directly.
+
+### Maintainer checks
+
+```bash
+pnpm run ontology:lint    # naming, inheritance, and ontology policy checks
+pnpm run ontology:compat  # static SysML v2 / SysIDE portability checks
+pnpm run build
+pnpm run test
+pnpm run type-check
+```
+
+The authoritative external parse/package validation remains the `sysand` build
+in the nested `memo` repository. Diagram and presentation generators are private
+release/documentation machinery maintained in `memo-meta`, not product tools.
+
+## Layout
+
+```
+packages/tools/       internal source for the root @memoarchitect/tools package
+tools/ontology-tools/ internal repository lint and editor-portability checks
+memo/                 git submodule → memoarchitect/memo (canonical SysML content)
+```
+
+The engine reads the ontology content live from the `memo`
+submodule — clone with `git clone --recurse-submodules`.
+
+## Quickstart
+
+Requires Node ≥ 20 and pnpm.
+
+```bash
+git clone --recurse-submodules https://github.com/memoarchitect/memo-tools.git
+cd memo-tools
+pnpm install && pnpm run build && pnpm run test
+
+# validate the GPCA reference pump
+pnpm run example:validate
+```
+
+Memo Tools deliberately exposes no CLI commands that require Architect.
+Interactive development and static viewer builds are provided by the separate
+`@memoarchitect/architect` command.
+
+## License
+
+MIT © 2026 memoarchitect

package/package.json

@@ -0,0 +1,86 @@
+{
+  "name": "@memoarchitect/tools",
+  "version": "0.4.4",
+  "description": "MEMO tools — SysML v2 parser, semantic model, validation, project operations, and CLI",
+  "type": "module",
+  "main": "./packages/tools/lib/index.js",
+  "types": "./packages/tools/lib/index.d.ts",
+  "bin": {
+    "memo": "./packages/tools/lib/bin/memo.js"
+  },
+  "memo": {
+    "contentPackage": "@memoarchitect/ontology"
+  },
+  "exports": {
+    ".": {
+      "types": "./packages/tools/lib/index.d.ts",
+      "import": "./packages/tools/lib/index.js"
+    },
+    "./browser": {
+      "types": "./packages/tools/lib/browser/index.d.ts",
+      "import": "./packages/tools/lib/browser/index.js"
+    },
+    "./types": {
+      "types": "./packages/tools/lib/types/index.d.ts",
+      "import": "./packages/tools/lib/types/index.js"
+    },
+    "./package.json": "./package.json"
+  },
+  "dependencies": {
+    "chalk": "^5.3.0",
+    "chokidar": "^4.0.0",
+    "commander": "^12.1.0",
+    "glob": "^11.0.0",
+    "langium": "^3.3.0",
+    "open": "^10.1.0",
+    "ora": "^8.1.0",
+    "uuid": "^10.0.0",
+    "vscode-languageserver": "^9.0.1",
+    "vscode-languageserver-textdocument": "^1.0.12",
+    "ws": "^8.18.0",
+    "yaml": "^2.5.0",
+    "@memoarchitect/ontology": "0.4.4"
+  },
+  "devDependencies": {
+    "@types/node": "^22.0.0",
+    "@types/ws": "^8.5.0",
+    "@vitest/coverage-v8": "^2.1.0",
+    "langium-cli": "^3.3.0",
+    "typescript": "~5.5.0",
+    "vite": "^6.0.0",
+    "vitest": "^2.1.0"
+  },
+  "files": [
+    "packages/tools/lib/",
+    "!packages/tools/lib/__tests__/",
+    "!packages/tools/lib/**/*.test.*",
+    "packages/tools/src/grammar/",
+    "README.md",
+    "LICENSE"
+  ],
+  "repository": {
+    "type": "git",
+    "url": "git+https://github.com/memoarchitect/memo-tools.git"
+  },
+  "license": "MIT",
+  "publishConfig": {
+    "access": "public"
+  },
+  "engines": {
+    "node": ">=20.0.0"
+  },
+  "scripts": {
+    "build": "cd packages/tools && langium generate && tsc",
+    "dev": "tsc -p packages/tools/tsconfig.json --watch",
+    "test": "cd packages/tools && vitest run",
+    "test:coverage": "cd packages/tools && vitest run --coverage",
+    "type-check": "tsc -p packages/tools/tsconfig.json --noEmit",
+    "clean": "rm -rf packages/tools/lib packages/tools/src/language/generated",
+    "memo": "node packages/tools/lib/bin/memo.js",
+    "example:validate": "cd memo/examples/gpca-pump && node ../../../packages/tools/lib/bin/memo.js validate .",
+    "docs:serve": "python3 -m mkdocs serve",
+    "docs:build": "python3 -m mkdocs build --strict",
+    "ontology:lint": "node tools/ontology-tools/lint.mjs",
+    "ontology:compat": "node tools/ontology-tools/syside-compat.mjs"
+  }
+}

package/packages/tools/lib/__tests__/archetype-parsing.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=archetype-parsing.test.d.ts.map

package/packages/tools/lib/__tests__/archetype-parsing.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"archetype-parsing.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/archetype-parsing.test.ts"],"names":[],"mappings":""}

package/packages/tools/lib/__tests__/archetype-parsing.test.js

@@ -0,0 +1,42 @@
+import { describe, it, expect } from 'vitest';
+import { readFileSync } from 'node:fs';
+import { parse as parseYaml } from 'yaml';
+import { findMemoManifests, resolveManifestPath } from '../model/manifest.js';
+function loadArchetypes() {
+    const loaded = findMemoManifests(__dirname).find(candidate => candidate.manifest.init.archetypes);
+    expect(loaded).toBeDefined();
+    const path = resolveManifestPath(loaded, loaded.manifest.init.archetypes);
+    const parsed = parseYaml(readFileSync(path, 'utf-8'));
+    return parsed.archetypes;
+}
+describe('manifest archetype catalog', () => {
+    const archetypes = loadArchetypes();
+    it('discovers all expected archetypes', () => {
+        const names = archetypes.map(a => a.id);
+        expect(names).toContain('samd');
+        expect(names).toContain('connected');
+        expect(names).toContain('monitoring');
+        expect(names).toContain('infusion_pump');
+        expect(names).toContain('blank');
+        expect(names).toHaveLength(5);
+    });
+    it('device-class archetypes have category="device-class"', () => {
+        expect(archetypes.every(a => a.category === 'device-class')).toBe(true);
+    });
+    it('samd archetype has correct standards', () => {
+        const samd = archetypes.find(a => a.id === 'samd');
+        expect(samd.includedStandards).toContain('ISO 14971');
+        expect(samd.includedStandards).toContain('IEC 62304');
+        expect(samd.includedStandards).toContain('IEC 82304-1');
+    });
+    it('infusion_pump archetype includes behavior layer', () => {
+        const pump = archetypes.find(a => a.id === 'infusion_pump');
+        expect(pump.includedLayers).toContain('behavior');
+        expect(pump.includedLayers).toContain('arch_risk');
+    });
+    it('blank archetype has empty layers', () => {
+        const blank = archetypes.find(a => a.id === 'blank');
+        expect(blank.includedLayers).toEqual([]);
+    });
+});
+//# sourceMappingURL=archetype-parsing.test.js.map

package/packages/tools/lib/__tests__/archetype-parsing.test.js.map

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package/packages/tools/lib/__tests__/architecture-discovery.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=architecture-discovery.test.d.ts.map

package/packages/tools/lib/__tests__/architecture-discovery.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"architecture-discovery.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/architecture-discovery.test.ts"],"names":[],"mappings":""}

package/packages/tools/lib/__tests__/architecture-discovery.test.js

@@ -0,0 +1,82 @@
+import { describe, it, expect, beforeEach, afterEach } from 'vitest';
+import { mkdtempSync, mkdirSync, writeFileSync, rmSync } from 'node:fs';
+import { tmpdir } from 'node:os';
+import { join } from 'node:path';
+import { buildLayers } from '../model/ontology-loader.js';
+// W1.06.01 C-1: layer discovery supports flat and nested architecture layouts.
+describe('buildLayers — architecture sublayer discovery', () => {
+    let root;
+    beforeEach(() => {
+        root = mkdtempSync(join(tmpdir(), 'memo-arch-discovery-'));
+    });
+    afterEach(() => {
+        rmSync(root, { recursive: true, force: true });
+    });
+    function writeKindFile(rel, kindName) {
+        const full = join(root, rel);
+        mkdirSync(full.substring(0, full.lastIndexOf('/')), { recursive: true });
+        writeFileSync(full, `part def ${kindName};\n`, 'utf-8');
+    }
+    it('loads kinds from flat architecture/<file>.sysml layout', () => {
+        writeKindFile('architecture/flat_kind.sysml', 'FlatKind');
+        const layers = buildLayers(root);
+        const arch = layers.find(l => l.id === 'architecture');
+        expect(arch).toBeDefined();
+        expect(arch.kinds.map(k => k.name)).toContain('FlatKind');
+    });
+    it('loads kinds from nested architecture/<sublayer>/<file>.sysml layout', () => {
+        writeKindFile('architecture/electrical/nested_kind.sysml', 'NestedKind');
+        const layers = buildLayers(root);
+        const arch = layers.find(l => l.id === 'architecture');
+        expect(arch).toBeDefined();
+        expect(arch.kinds.map(k => k.name)).toContain('NestedKind');
+    });
+    it('loads both flat and nested files together under architecture/', () => {
+        writeKindFile('architecture/flat_kind.sysml', 'FlatKind');
+        writeKindFile('architecture/electrical/nested_kind.sysml', 'NestedKind');
+        writeKindFile('architecture/mechanical/another_kind.sysml', 'AnotherKind');
+        const layers = buildLayers(root);
+        const arch = layers.find(l => l.id === 'architecture');
+        expect(arch).toBeDefined();
+        const names = arch.kinds.map(k => k.name).sort();
+        expect(names).toEqual(['AnotherKind', 'FlatKind', 'NestedKind']);
+    });
+});
+// W1.08.01 E-1: artifact folder skeleton — layer discovery for artifacts/
+describe('buildLayers — artifact layer discovery', () => {
+    let root;
+    beforeEach(() => {
+        root = mkdtempSync(join(tmpdir(), 'memo-artifact-discovery-'));
+    });
+    afterEach(() => {
+        rmSync(root, { recursive: true, force: true });
+    });
+    function writeKindFile(rel, content) {
+        const full = join(root, rel);
+        mkdirSync(full.substring(0, full.lastIndexOf('/')), { recursive: true });
+        writeFileSync(full, content, 'utf-8');
+    }
+    it('discovers artifacts/ as a layer', () => {
+        writeKindFile('artifacts/risk_plan.sysml', 'part def RiskManagementPlan;\n');
+        const layers = buildLayers(root);
+        const artifacts = layers.find(l => l.id === 'artifacts');
+        expect(artifacts).toBeDefined();
+        expect(artifacts.kinds.map(k => k.name)).toContain('RiskManagementPlan');
+    });
+    it('coexists with other layers without interference', () => {
+        writeKindFile('architecture/some_kind.sysml', 'part def SomeKind;\n');
+        writeKindFile('artifacts/risk_plan.sysml', 'part def RiskManagementPlan;\n');
+        const layers = buildLayers(root);
+        expect(layers.find(l => l.id === 'architecture')).toBeDefined();
+        expect(layers.find(l => l.id === 'artifacts')).toBeDefined();
+        expect(layers).toHaveLength(2);
+    });
+    it('empty artifacts/ dir produces no layer', () => {
+        mkdirSync(join(root, 'artifacts'), { recursive: true });
+        const layers = buildLayers(root);
+        const artifacts = layers.find(l => l.id === 'artifacts');
+        expect(artifacts).toBeDefined();
+        expect(artifacts.kindCount).toBe(0);
+    });
+});
+//# sourceMappingURL=architecture-discovery.test.js.map

package/packages/tools/lib/__tests__/architecture-discovery.test.js.map

@@ -0,0 +1 @@
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package/packages/tools/lib/__tests__/behavior.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=behavior.test.d.ts.map

package/packages/tools/lib/__tests__/behavior.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"behavior.test.d.ts","sourceRoot":"","sources":["../../src/__tests__/behavior.test.ts"],"names":[],"mappings":""}