@medplum/core 0.2.1 → 0.4.1

package/dist/fhir/SubstanceAmount.js

@@ -1,7 +0,0 @@
-"use strict";
-/*
- * Generated by @medplum/generator
- * Do not edit manually.
- */
-Object.defineProperty(exports, "__esModule", { value: true });
-//# sourceMappingURL=SubstanceAmount.js.map

package/dist/fhir/SubstanceAmount.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"SubstanceAmount.js","sourceRoot":"","sources":["../../src/fhir/SubstanceAmount.ts"],"names":[],"mappings":";AAAA;;;GAGG","sourcesContent":["/*\n * Generated by @medplum/generator\n * Do not edit manually.\n */\n\nimport { CodeableConcept } from './CodeableConcept';\nimport { Extension } from './Extension';\nimport { Quantity } from './Quantity';\nimport { Range } from './Range';\n\n/**\n * Base StructureDefinition for SubstanceAmount Type: Chemical substances\n * are a single substance type whose primary defining element is the\n * molecular structure. Chemical substances shall be defined on the basis\n * of their complete covalent molecular structure; the presence of a salt\n * (counter-ion) and/or solvates (water, alcohols) is also captured.\n * Purity, grade, physical form or particle size are not taken into\n * account in the definition of a chemical substance or in the assignment\n * of a Substance ID.\n */\nexport interface SubstanceAmount {\n\n  /**\n   * Unique id for the element within a resource (for internal references).\n   * This may be any string value that does not contain spaces.\n   */\n  readonly id?: string;\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element. To make the use of extensions\n   * safe and manageable, there is a strict set of governance  applied to\n   * the definition and use of extensions. Though any implementer can\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension.\n   */\n  readonly extension?: Extension[];\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element and that modifies the\n   * understanding of the element in which it is contained and/or the\n   * understanding of the containing element's descendants. Usually\n   * modifier elements provide negation or qualification. To make the use\n   * of extensions safe and manageable, there is a strict set of governance\n   * applied to the definition and use of extensions. Though any\n   * implementer can define an extension, there is a set of requirements\n   * that SHALL be met as part of the definition of the extension.\n   * Applications processing a resource are required to check for modifier\n   * extensions.\n   *\n   * Modifier extensions SHALL NOT change the meaning of any elements on\n   * Resource or DomainResource (including cannot change the meaning of\n   * modifierExtension itself).\n   */\n  readonly modifierExtension?: Extension[];\n\n  /**\n   * Used to capture quantitative values for a variety of elements. If only\n   * limits are given, the arithmetic mean would be the average. If only a\n   * single definite value for a given element is given, it would be\n   * captured in this field.\n   */\n  readonly amountQuantity?: Quantity;\n\n  /**\n   * Used to capture quantitative values for a variety of elements. If only\n   * limits are given, the arithmetic mean would be the average. If only a\n   * single definite value for a given element is given, it would be\n   * captured in this field.\n   */\n  readonly amountRange?: Range;\n\n  /**\n   * Used to capture quantitative values for a variety of elements. If only\n   * limits are given, the arithmetic mean would be the average. If only a\n   * single definite value for a given element is given, it would be\n   * captured in this field.\n   */\n  readonly amountString?: string;\n\n  /**\n   * Most elements that require a quantitative value will also have a field\n   * called amount type. Amount type should always be specified because the\n   * actual value of the amount is often dependent on it. EXAMPLE: In\n   * capturing the actual relative amounts of substances or molecular\n   * fragments it is essential to indicate whether the amount refers to a\n   * mole ratio or weight ratio. For any given element an effort should be\n   * made to use same the amount type for all related definitional\n   * elements.\n   */\n  readonly amountType?: CodeableConcept;\n\n  /**\n   * A textual comment on a numeric value.\n   */\n  readonly amountText?: string;\n\n  /**\n   * Reference range of possible or expected values.\n   */\n  readonly referenceRange?: SubstanceAmountReferenceRange;\n}\n\n/**\n * Reference range of possible or expected values.\n */\nexport interface SubstanceAmountReferenceRange {\n\n  /**\n   * Unique id for the element within a resource (for internal references).\n   * This may be any string value that does not contain spaces.\n   */\n  readonly id?: string;\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element. To make the use of extensions\n   * safe and manageable, there is a strict set of governance  applied to\n   * the definition and use of extensions. Though any implementer can\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension.\n   */\n  readonly extension?: Extension[];\n\n  /**\n   * Lower limit possible or expected.\n   */\n  readonly lowLimit?: Quantity;\n\n  /**\n   * Upper limit possible or expected.\n   */\n  readonly highLimit?: Quantity;\n}\n"]}

package/dist/fhir/SubstanceNucleicAcid.d.ts

@@ -1,309 +0,0 @@
-import { Attachment } from './Attachment';
-import { CodeableConcept } from './CodeableConcept';
-import { Extension } from './Extension';
-import { Identifier } from './Identifier';
-import { Meta } from './Meta';
-import { Narrative } from './Narrative';
-import { Resource } from './Resource';
-/**
- * Nucleic acids are defined by three distinct elements: the base, sugar
- * and linkage. Individual substance/moiety IDs will be created for each
- * of these elements. The nucleotide sequence will be always entered in
- * the 5’-3’ direction.
- */
-export interface SubstanceNucleicAcid {
-    /**
-     * This is a SubstanceNucleicAcid resource
-     */
-    readonly resourceType: 'SubstanceNucleicAcid';
-    /**
-     * The logical id of the resource, as used in the URL for the resource.
-     * Once assigned, this value never changes.
-     */
-    readonly id?: string;
-    /**
-     * The metadata about the resource. This is content that is maintained by
-     * the infrastructure. Changes to the content might not always be
-     * associated with version changes to the resource.
-     */
-    readonly meta?: Meta;
-    /**
-     * A reference to a set of rules that were followed when the resource was
-     * constructed, and which must be understood when processing the content.
-     * Often, this is a reference to an implementation guide that defines the
-     * special rules along with other profiles etc.
-     */
-    readonly implicitRules?: string;
-    /**
-     * The base language in which the resource is written.
-     */
-    readonly language?: string;
-    /**
-     * A human-readable narrative that contains a summary of the resource and
-     * can be used to represent the content of the resource to a human. The
-     * narrative need not encode all the structured data, but is required to
-     * contain sufficient detail to make it "clinically safe" for a human to
-     * just read the narrative. Resource definitions may define what content
-     * should be represented in the narrative to ensure clinical safety.
-     */
-    readonly text?: Narrative;
-    /**
-     * These resources do not have an independent existence apart from the
-     * resource that contains them - they cannot be identified independently,
-     * and nor can they have their own independent transaction scope.
-     */
-    readonly contained?: Resource[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the resource. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the resource and that modifies the
-     * understanding of the element that contains it and/or the understanding
-     * of the containing element's descendants. Usually modifier elements
-     * provide negation or qualification. To make the use of extensions safe
-     * and manageable, there is a strict set of governance applied to the
-     * definition and use of extensions. Though any implementer is allowed to
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension. Applications processing a
-     * resource are required to check for modifier extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * The type of the sequence shall be specified based on a controlled
-     * vocabulary.
-     */
-    readonly sequenceType?: CodeableConcept;
-    /**
-     * The number of linear sequences of nucleotides linked through
-     * phosphodiester bonds shall be described. Subunits would be strands of
-     * nucleic acids that are tightly associated typically through
-     * Watson-Crick base pairing. NOTE: If not specified in the reference
-     * source, the assumption is that there is 1 subunit.
-     */
-    readonly numberOfSubunits?: number;
-    /**
-     * The area of hybridisation shall be described if applicable for double
-     * stranded RNA or DNA. The number associated with the subunit followed
-     * by the number associated to the residue shall be specified in
-     * increasing order. The underscore “” shall be used as separator as
-     * follows: “Subunitnumber Residue”.
-     */
-    readonly areaOfHybridisation?: string;
-    /**
-     * (TBC).
-     */
-    readonly oligoNucleotideType?: CodeableConcept;
-    /**
-     * Subunits are listed in order of decreasing length; sequences of the
-     * same length will be ordered by molecular weight; subunits that have
-     * identical sequences will be repeated multiple times.
-     */
-    readonly subunit?: SubstanceNucleicAcidSubunit[];
-}
-/**
- * Subunits are listed in order of decreasing length; sequences of the
- * same length will be ordered by molecular weight; subunits that have
- * identical sequences will be repeated multiple times.
- */
-export interface SubstanceNucleicAcidSubunit {
-    /**
-     * Unique id for the element within a resource (for internal references).
-     * This may be any string value that does not contain spaces.
-     */
-    readonly id?: string;
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element and that modifies the
-     * understanding of the element in which it is contained and/or the
-     * understanding of the containing element's descendants. Usually
-     * modifier elements provide negation or qualification. To make the use
-     * of extensions safe and manageable, there is a strict set of governance
-     * applied to the definition and use of extensions. Though any
-     * implementer can define an extension, there is a set of requirements
-     * that SHALL be met as part of the definition of the extension.
-     * Applications processing a resource are required to check for modifier
-     * extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * Index of linear sequences of nucleic acids in order of decreasing
-     * length. Sequences of the same length will be ordered by molecular
-     * weight. Subunits that have identical sequences will be repeated and
-     * have sequential subscripts.
-     */
-    readonly subunit?: number;
-    /**
-     * Actual nucleotide sequence notation from 5' to 3' end using standard
-     * single letter codes. In addition to the base sequence, sugar and type
-     * of phosphate or non-phosphate linkage should also be captured.
-     */
-    readonly sequence?: string;
-    /**
-     * The length of the sequence shall be captured.
-     */
-    readonly length?: number;
-    /**
-     * (TBC).
-     */
-    readonly sequenceAttachment?: Attachment;
-    /**
-     * The nucleotide present at the 5’ terminal shall be specified based on
-     * a controlled vocabulary. Since the sequence is represented from the 5'
-     * to the 3' end, the 5’ prime nucleotide is the letter at the first
-     * position in the sequence. A separate representation would be
-     * redundant.
-     */
-    readonly fivePrime?: CodeableConcept;
-    /**
-     * The nucleotide present at the 3’ terminal shall be specified based on
-     * a controlled vocabulary. Since the sequence is represented from the 5'
-     * to the 3' end, the 5’ prime nucleotide is the letter at the last
-     * position in the sequence. A separate representation would be
-     * redundant.
-     */
-    readonly threePrime?: CodeableConcept;
-    /**
-     * The linkages between sugar residues will also be captured.
-     */
-    readonly linkage?: SubstanceNucleicAcidSubunitLinkage[];
-    /**
-     * 5.3.6.8.1 Sugar ID (Mandatory).
-     */
-    readonly sugar?: SubstanceNucleicAcidSubunitSugar[];
-}
-/**
- * The linkages between sugar residues will also be captured.
- */
-export interface SubstanceNucleicAcidSubunitLinkage {
-    /**
-     * Unique id for the element within a resource (for internal references).
-     * This may be any string value that does not contain spaces.
-     */
-    readonly id?: string;
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element and that modifies the
-     * understanding of the element in which it is contained and/or the
-     * understanding of the containing element's descendants. Usually
-     * modifier elements provide negation or qualification. To make the use
-     * of extensions safe and manageable, there is a strict set of governance
-     * applied to the definition and use of extensions. Though any
-     * implementer can define an extension, there is a set of requirements
-     * that SHALL be met as part of the definition of the extension.
-     * Applications processing a resource are required to check for modifier
-     * extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * The entity that links the sugar residues together should also be
-     * captured for nearly all naturally occurring nucleic acid the linkage
-     * is a phosphate group. For many synthetic oligonucleotides
-     * phosphorothioate linkages are often seen. Linkage connectivity is
-     * assumed to be 3’-5’. If the linkage is either 3’-3’ or 5’-5’ this
-     * should be specified.
-     */
-    readonly connectivity?: string;
-    /**
-     * Each linkage will be registered as a fragment and have an ID.
-     */
-    readonly identifier?: Identifier;
-    /**
-     * Each linkage will be registered as a fragment and have at least one
-     * name. A single name shall be assigned to each linkage.
-     */
-    readonly name?: string;
-    /**
-     * Residues shall be captured as described in 5.3.6.8.3.
-     */
-    readonly residueSite?: string;
-}
-/**
- * 5.3.6.8.1 Sugar ID (Mandatory).
- */
-export interface SubstanceNucleicAcidSubunitSugar {
-    /**
-     * Unique id for the element within a resource (for internal references).
-     * This may be any string value that does not contain spaces.
-     */
-    readonly id?: string;
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element. To make the use of extensions
-     * safe and manageable, there is a strict set of governance  applied to
-     * the definition and use of extensions. Though any implementer can
-     * define an extension, there is a set of requirements that SHALL be met
-     * as part of the definition of the extension.
-     */
-    readonly extension?: Extension[];
-    /**
-     * May be used to represent additional information that is not part of
-     * the basic definition of the element and that modifies the
-     * understanding of the element in which it is contained and/or the
-     * understanding of the containing element's descendants. Usually
-     * modifier elements provide negation or qualification. To make the use
-     * of extensions safe and manageable, there is a strict set of governance
-     * applied to the definition and use of extensions. Though any
-     * implementer can define an extension, there is a set of requirements
-     * that SHALL be met as part of the definition of the extension.
-     * Applications processing a resource are required to check for modifier
-     * extensions.
-     *
-     * Modifier extensions SHALL NOT change the meaning of any elements on
-     * Resource or DomainResource (including cannot change the meaning of
-     * modifierExtension itself).
-     */
-    readonly modifierExtension?: Extension[];
-    /**
-     * The Substance ID of the sugar or sugar-like component that make up the
-     * nucleotide.
-     */
-    readonly identifier?: Identifier;
-    /**
-     * The name of the sugar or sugar-like component that make up the
-     * nucleotide.
-     */
-    readonly name?: string;
-    /**
-     * The residues that contain a given sugar will be captured. The order of
-     * given residues will be captured in the 5‘-3‘direction consistent with
-     * the base sequences listed above.
-     */
-    readonly residueSite?: string;
-}

package/dist/fhir/SubstanceNucleicAcid.js

@@ -1,7 +0,0 @@
-"use strict";
-/*
- * Generated by @medplum/generator
- * Do not edit manually.
- */
-Object.defineProperty(exports, "__esModule", { value: true });
-//# sourceMappingURL=SubstanceNucleicAcid.js.map

package/dist/fhir/SubstanceNucleicAcid.js.map

@@ -1 +0,0 @@
-{"version":3,"file":"SubstanceNucleicAcid.js","sourceRoot":"","sources":["../../src/fhir/SubstanceNucleicAcid.ts"],"names":[],"mappings":";AAAA;;;GAGG","sourcesContent":["/*\n * Generated by @medplum/generator\n * Do not edit manually.\n */\n\nimport { Attachment } from './Attachment';\nimport { CodeableConcept } from './CodeableConcept';\nimport { Extension } from './Extension';\nimport { Identifier } from './Identifier';\nimport { Meta } from './Meta';\nimport { Narrative } from './Narrative';\nimport { Resource } from './Resource';\n\n/**\n * Nucleic acids are defined by three distinct elements: the base, sugar\n * and linkage. Individual substance/moiety IDs will be created for each\n * of these elements. The nucleotide sequence will be always entered in\n * the 5’-3’ direction.\n */\nexport interface SubstanceNucleicAcid {\n\n  /**\n   * This is a SubstanceNucleicAcid resource\n   */\n  readonly resourceType: 'SubstanceNucleicAcid';\n\n  /**\n   * The logical id of the resource, as used in the URL for the resource.\n   * Once assigned, this value never changes.\n   */\n  readonly id?: string;\n\n  /**\n   * The metadata about the resource. This is content that is maintained by\n   * the infrastructure. Changes to the content might not always be\n   * associated with version changes to the resource.\n   */\n  readonly meta?: Meta;\n\n  /**\n   * A reference to a set of rules that were followed when the resource was\n   * constructed, and which must be understood when processing the content.\n   * Often, this is a reference to an implementation guide that defines the\n   * special rules along with other profiles etc.\n   */\n  readonly implicitRules?: string;\n\n  /**\n   * The base language in which the resource is written.\n   */\n  readonly language?: string;\n\n  /**\n   * A human-readable narrative that contains a summary of the resource and\n   * can be used to represent the content of the resource to a human. The\n   * narrative need not encode all the structured data, but is required to\n   * contain sufficient detail to make it "clinically safe" for a human to\n   * just read the narrative. Resource definitions may define what content\n   * should be represented in the narrative to ensure clinical safety.\n   */\n  readonly text?: Narrative;\n\n  /**\n   * These resources do not have an independent existence apart from the\n   * resource that contains them - they cannot be identified independently,\n   * and nor can they have their own independent transaction scope.\n   */\n  readonly contained?: Resource[];\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the resource. To make the use of extensions\n   * safe and manageable, there is a strict set of governance  applied to\n   * the definition and use of extensions. Though any implementer can\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension.\n   */\n  readonly extension?: Extension[];\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the resource and that modifies the\n   * understanding of the element that contains it and/or the understanding\n   * of the containing element's descendants. Usually modifier elements\n   * provide negation or qualification. To make the use of extensions safe\n   * and manageable, there is a strict set of governance applied to the\n   * definition and use of extensions. Though any implementer is allowed to\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension. Applications processing a\n   * resource are required to check for modifier extensions.\n   *\n   * Modifier extensions SHALL NOT change the meaning of any elements on\n   * Resource or DomainResource (including cannot change the meaning of\n   * modifierExtension itself).\n   */\n  readonly modifierExtension?: Extension[];\n\n  /**\n   * The type of the sequence shall be specified based on a controlled\n   * vocabulary.\n   */\n  readonly sequenceType?: CodeableConcept;\n\n  /**\n   * The number of linear sequences of nucleotides linked through\n   * phosphodiester bonds shall be described. Subunits would be strands of\n   * nucleic acids that are tightly associated typically through\n   * Watson-Crick base pairing. NOTE: If not specified in the reference\n   * source, the assumption is that there is 1 subunit.\n   */\n  readonly numberOfSubunits?: number;\n\n  /**\n   * The area of hybridisation shall be described if applicable for double\n   * stranded RNA or DNA. The number associated with the subunit followed\n   * by the number associated to the residue shall be specified in\n   * increasing order. The underscore “” shall be used as separator as\n   * follows: “Subunitnumber Residue”.\n   */\n  readonly areaOfHybridisation?: string;\n\n  /**\n   * (TBC).\n   */\n  readonly oligoNucleotideType?: CodeableConcept;\n\n  /**\n   * Subunits are listed in order of decreasing length; sequences of the\n   * same length will be ordered by molecular weight; subunits that have\n   * identical sequences will be repeated multiple times.\n   */\n  readonly subunit?: SubstanceNucleicAcidSubunit[];\n}\n\n/**\n * Subunits are listed in order of decreasing length; sequences of the\n * same length will be ordered by molecular weight; subunits that have\n * identical sequences will be repeated multiple times.\n */\nexport interface SubstanceNucleicAcidSubunit {\n\n  /**\n   * Unique id for the element within a resource (for internal references).\n   * This may be any string value that does not contain spaces.\n   */\n  readonly id?: string;\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element. To make the use of extensions\n   * safe and manageable, there is a strict set of governance  applied to\n   * the definition and use of extensions. Though any implementer can\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension.\n   */\n  readonly extension?: Extension[];\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element and that modifies the\n   * understanding of the element in which it is contained and/or the\n   * understanding of the containing element's descendants. Usually\n   * modifier elements provide negation or qualification. To make the use\n   * of extensions safe and manageable, there is a strict set of governance\n   * applied to the definition and use of extensions. Though any\n   * implementer can define an extension, there is a set of requirements\n   * that SHALL be met as part of the definition of the extension.\n   * Applications processing a resource are required to check for modifier\n   * extensions.\n   *\n   * Modifier extensions SHALL NOT change the meaning of any elements on\n   * Resource or DomainResource (including cannot change the meaning of\n   * modifierExtension itself).\n   */\n  readonly modifierExtension?: Extension[];\n\n  /**\n   * Index of linear sequences of nucleic acids in order of decreasing\n   * length. Sequences of the same length will be ordered by molecular\n   * weight. Subunits that have identical sequences will be repeated and\n   * have sequential subscripts.\n   */\n  readonly subunit?: number;\n\n  /**\n   * Actual nucleotide sequence notation from 5' to 3' end using standard\n   * single letter codes. In addition to the base sequence, sugar and type\n   * of phosphate or non-phosphate linkage should also be captured.\n   */\n  readonly sequence?: string;\n\n  /**\n   * The length of the sequence shall be captured.\n   */\n  readonly length?: number;\n\n  /**\n   * (TBC).\n   */\n  readonly sequenceAttachment?: Attachment;\n\n  /**\n   * The nucleotide present at the 5’ terminal shall be specified based on\n   * a controlled vocabulary. Since the sequence is represented from the 5'\n   * to the 3' end, the 5’ prime nucleotide is the letter at the first\n   * position in the sequence. A separate representation would be\n   * redundant.\n   */\n  readonly fivePrime?: CodeableConcept;\n\n  /**\n   * The nucleotide present at the 3’ terminal shall be specified based on\n   * a controlled vocabulary. Since the sequence is represented from the 5'\n   * to the 3' end, the 5’ prime nucleotide is the letter at the last\n   * position in the sequence. A separate representation would be\n   * redundant.\n   */\n  readonly threePrime?: CodeableConcept;\n\n  /**\n   * The linkages between sugar residues will also be captured.\n   */\n  readonly linkage?: SubstanceNucleicAcidSubunitLinkage[];\n\n  /**\n   * 5.3.6.8.1 Sugar ID (Mandatory).\n   */\n  readonly sugar?: SubstanceNucleicAcidSubunitSugar[];\n}\n\n/**\n * The linkages between sugar residues will also be captured.\n */\nexport interface SubstanceNucleicAcidSubunitLinkage {\n\n  /**\n   * Unique id for the element within a resource (for internal references).\n   * This may be any string value that does not contain spaces.\n   */\n  readonly id?: string;\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element. To make the use of extensions\n   * safe and manageable, there is a strict set of governance  applied to\n   * the definition and use of extensions. Though any implementer can\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension.\n   */\n  readonly extension?: Extension[];\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element and that modifies the\n   * understanding of the element in which it is contained and/or the\n   * understanding of the containing element's descendants. Usually\n   * modifier elements provide negation or qualification. To make the use\n   * of extensions safe and manageable, there is a strict set of governance\n   * applied to the definition and use of extensions. Though any\n   * implementer can define an extension, there is a set of requirements\n   * that SHALL be met as part of the definition of the extension.\n   * Applications processing a resource are required to check for modifier\n   * extensions.\n   *\n   * Modifier extensions SHALL NOT change the meaning of any elements on\n   * Resource or DomainResource (including cannot change the meaning of\n   * modifierExtension itself).\n   */\n  readonly modifierExtension?: Extension[];\n\n  /**\n   * The entity that links the sugar residues together should also be\n   * captured for nearly all naturally occurring nucleic acid the linkage\n   * is a phosphate group. For many synthetic oligonucleotides\n   * phosphorothioate linkages are often seen. Linkage connectivity is\n   * assumed to be 3’-5’. If the linkage is either 3’-3’ or 5’-5’ this\n   * should be specified.\n   */\n  readonly connectivity?: string;\n\n  /**\n   * Each linkage will be registered as a fragment and have an ID.\n   */\n  readonly identifier?: Identifier;\n\n  /**\n   * Each linkage will be registered as a fragment and have at least one\n   * name. A single name shall be assigned to each linkage.\n   */\n  readonly name?: string;\n\n  /**\n   * Residues shall be captured as described in 5.3.6.8.3.\n   */\n  readonly residueSite?: string;\n}\n\n/**\n * 5.3.6.8.1 Sugar ID (Mandatory).\n */\nexport interface SubstanceNucleicAcidSubunitSugar {\n\n  /**\n   * Unique id for the element within a resource (for internal references).\n   * This may be any string value that does not contain spaces.\n   */\n  readonly id?: string;\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element. To make the use of extensions\n   * safe and manageable, there is a strict set of governance  applied to\n   * the definition and use of extensions. Though any implementer can\n   * define an extension, there is a set of requirements that SHALL be met\n   * as part of the definition of the extension.\n   */\n  readonly extension?: Extension[];\n\n  /**\n   * May be used to represent additional information that is not part of\n   * the basic definition of the element and that modifies the\n   * understanding of the element in which it is contained and/or the\n   * understanding of the containing element's descendants. Usually\n   * modifier elements provide negation or qualification. To make the use\n   * of extensions safe and manageable, there is a strict set of governance\n   * applied to the definition and use of extensions. Though any\n   * implementer can define an extension, there is a set of requirements\n   * that SHALL be met as part of the definition of the extension.\n   * Applications processing a resource are required to check for modifier\n   * extensions.\n   *\n   * Modifier extensions SHALL NOT change the meaning of any elements on\n   * Resource or DomainResource (including cannot change the meaning of\n   * modifierExtension itself).\n   */\n  readonly modifierExtension?: Extension[];\n\n  /**\n   * The Substance ID of the sugar or sugar-like component that make up the\n   * nucleotide.\n   */\n  readonly identifier?: Identifier;\n\n  /**\n   * The name of the sugar or sugar-like component that make up the\n   * nucleotide.\n   */\n  readonly name?: string;\n\n  /**\n   * The residues that contain a given sugar will be captured. The order of\n   * given residues will be captured in the 5‘-3‘direction consistent with\n   * the base sequences listed above.\n   */\n  readonly residueSite?: string;\n}\n"]}