@mcp-graph-workflow/mcp-graph 5.2.0 → 5.4.0

package/dist/core/events/event-types.d.ts

@@ -1,4 +1,4 @@
-export type GraphEventType = "node:created" | "node:updated" | "node:deleted" | "edge:created" | "edge:deleted" | "import:completed" | "bulk:updated" | "knowledge:indexed" | "knowledge:deleted" | "phase:transitioned" | "log:entry";
+export type GraphEventType = "node:created" | "node:updated" | "node:deleted" | "edge:created" | "edge:deleted" | "import:completed" | "bulk:updated" | "knowledge:indexed" | "knowledge:deleted" | "phase:transitioned" | "log:entry" | "error:detected" | "healing:memory_created";
 export interface GraphEvent {
     type: GraphEventType;
     timestamp: string;
@@ -87,4 +87,21 @@ export interface LogEntryEvent extends GraphEvent {
         context?: Record<string, unknown>;
     };
 }
+export interface ErrorDetectedEvent extends GraphEvent {
+    type: "error:detected";
+    payload: {
+        toolName: string;
+        errorMessage: string;
+        errorCategory: string;
+        errorHash: string;
+    };
+}
+export interface HealingMemoryCreatedEvent extends GraphEvent {
+    type: "healing:memory_created";
+    payload: {
+        memoryName: string;
+        errorCategory: string;
+        errorHash: string;
+    };
+}
 //# sourceMappingURL=event-types.d.ts.map

package/dist/core/events/event-types.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"event-types.d.ts","sourceRoot":"","sources":["../../../src/core/events/event-types.ts"],"names":[],"mappings":"AAAA,MAAM,MAAM,cAAc,GACtB,cAAc,GACd,cAAc,GACd,cAAc,GACd,cAAc,GACd,cAAc,GACd,kBAAkB,GAClB,cAAc,GACd,mBAAmB,GACnB,mBAAmB,GACnB,oBAAoB,GACpB,WAAW,GACX,gBAAgB,GAChB,wBAAwB,CAAC;AAE7B,MAAM,WAAW,UAAU;IACzB,IAAI,EAAE,cAAc,CAAC;IACrB,SAAS,EAAE,MAAM,CAAC;IAClB,OAAO,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CAClC;AAED,MAAM,WAAW,gBAAiB,SAAQ,UAAU;IAClD,IAAI,EAAE,cAAc,CAAC;IACrB,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,QAAQ,EAAE,MAAM,CAAA;KAAE,CAAC;CAC9D;AAED,MAAM,WAAW,gBAAiB,SAAQ,UAAU;IAClD,IAAI,EAAE,cAAc,CAAC;IACrB,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,MAAM,EAAE,MAAM,EAAE,CAAA;KAAE,CAAC;CAC/C;AAED,MAAM,WAAW,gBAAiB,SAAQ,UAAU;IAClD,IAAI,EAAE,cAAc,CAAC;IACrB,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;CAC7B;AAED,MAAM,WAAW,gBAAiB,SAAQ,UAAU;IAClD,IAAI,EAAE,cAAc,CAAC;IACrB,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,IAAI,EAAE,MAAM,CAAC;QAAC,EAAE,EAAE,MAAM,CAAC;QAAC,YAAY,EAAE,MAAM,CAAA;KAAE,CAAC;CAC7E;AAED,MAAM,WAAW,gBAAiB,SAAQ,UAAU;IAClD,IAAI,EAAE,cAAc,CAAC;IACrB,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAA;KAAE,CAAC;CAC7B;AAED,MAAM,WAAW,oBAAqB,SAAQ,UAAU;IACtD,IAAI,EAAE,kBAAkB,CAAC;IACzB,OAAO,EAAE;QAAE,YAAY,EAAE,MAAM,CAAC;QAAC,YAAY,EAAE,MAAM,CAAA;KAAE,CAAC;CACzD;AAED,MAAM,WAAW,gBAAiB,SAAQ,UAAU;IAClD,IAAI,EAAE,cAAc,CAAC;IACrB,OAAO,EAAE;QAAE,KAAK,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAA;KAAE,CAAC;CAC/C;AAED,MAAM,WAAW,qBAAsB,SAAQ,UAAU;IACvD,IAAI,EAAE,mBAAmB,CAAC;IAC1B,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,gBAAgB,EAAE,MAAM,CAAA;KAAE,CAAC;CACvD;AAED,MAAM,WAAW,qBAAsB,SAAQ,UAAU;IACvD,IAAI,EAAE,mBAAmB,CAAC;IAC1B,OAAO,EAAE;QAAE,MAAM,EAAE,MAAM,CAAC;QAAC,gBAAgB,EAAE,MAAM,CAAA;KAAE,CAAC;CACvD;AAED,MAAM,WAAW,sBAAuB,SAAQ,UAAU;IACxD,IAAI,EAAE,oBAAoB,CAAC;IAC3B,OAAO,EAAE;QACP,SAAS,EAAE,MAAM,CAAC;QAClB,OAAO,EAAE,MAAM,CAAC;QAChB,MAAM,EAAE,OAAO,CAAC;QAChB,UAAU,EAAE,MAAM,CAAC;QACnB,cAAc,EAAE,MAAM,CAAC;KACxB,CAAC;CACH;AAED,MAAM,WAAW,aAAc,SAAQ,UAAU;IAC/C,IAAI,EAAE,WAAW,CAAC;IAClB,OAAO,EAAE;QAAE,EAAE,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,OAAO,EAAE,MAAM,CAAC;QAAC,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAA;KAAE,CAAC;CAC5F;AAED,MAAM,WAAW,kBAAmB,SAAQ,UAAU;IACpD,IAAI,EAAE,gBAAgB,CAAC;IACvB,OAAO,EAAE;QAAE,QAAQ,EAAE,MAAM,CAAC;QAAC,YAAY,EAAE,MAAM,CAAC;QAAC,aAAa,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAA;KAAE,CAAC;CAC/F;AAED,MAAM,WAAW,yBAA0B,SAAQ,UAAU;IAC3D,IAAI,EAAE,wBAAwB,CAAC;IAC/B,OAAO,EAAE;QAAE,UAAU,EAAE,MAAM,CAAC;QAAC,aAAa,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAA;KAAE,CAAC;CAC3E"}

package/dist/core/graph/graph-types.d.ts

@@ -54,6 +54,7 @@ export interface GraphIndexes {
 export interface GraphProject {
     id: string;
     name: string;
+    fsPath?: string;
     createdAt: string;
     updatedAt: string;
 }

package/dist/core/graph/graph-types.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"graph-types.d.ts","sourceRoot":"","sources":["../../../src/core/graph/graph-types.ts"],"names":[],"mappings":"AAAA,MAAM,MAAM,QAAQ,GAChB,MAAM,GACN,MAAM,GACN,SAAS,GACT,aAAa,GACb,YAAY,GACZ,WAAW,GACX,qBAAqB,GACrB,MAAM,GACN,UAAU,CAAC;AAEf,MAAM,MAAM,UAAU,GAClB,SAAS,GACT,OAAO,GACP,aAAa,GACb,SAAS,GACT,MAAM,CAAC;AAEX,MAAM,MAAM,MAAM,GAAG,IAAI,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,IAAI,CAAC;AAEnD,MAAM,MAAM,YAAY,GACpB,WAAW,GACX,UAAU,GACV,YAAY,GACZ,QAAQ,GACR,YAAY,GACZ,eAAe,GACf,YAAY,GACZ,cAAc,CAAC;AAEnB,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,QAAQ,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,EAAE,UAAU,CAAC;IACnB,QAAQ,EAAE,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;IAC5B,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,IAAI,CAAC,EAAE,MAAM,EAAE,CAAC;IAChB,QAAQ,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,SAAS,CAAC,EAAE,SAAS,CAAC;IACtB,kBAAkB,CAAC,EAAE,MAAM,EAAE,CAAC;IAC9B,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,QAAQ,CAAC,EAAE;QACT,QAAQ,CAAC,EAAE,OAAO,CAAC;QACnB,MAAM,CAAC,EAAE,MAAM,CAAC;QAChB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;KACxB,CAAC;IACF,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,EAAE,EAAE,MAAM,CAAC;IACX,YAAY,EAAE,YAAY,CAAC;IAC3B,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,QAAQ,CAAC,EAAE;QACT,QAAQ,CAAC,EAAE,OAAO,CAAC;QACnB,UAAU,CAAC,EAAE,MAAM,CAAC;QACpB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;KACxB,CAAC;IACF,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IAC7B,gBAAgB,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;IAC3C,cAAc,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;IACzC,cAAc,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;CAC1C;AAED,MAAM,WAAW,YAAY;IAC3B,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,SAAS;IACxB,WAAW,EAAE,MAAM,EAAE,CAAC;IACtB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;CAC3B;AAED,MAAM,WAAW,aAAa;IAC5B,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,YAAY,CAAC;IACtB,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,OAAO,EAAE,YAAY,CAAC;IACtB,IAAI,EAAE,SAAS,CAAC;CACjB"}
+{"version":3,"file":"graph-types.d.ts","sourceRoot":"","sources":["../../../src/core/graph/graph-types.ts"],"names":[],"mappings":"AAAA,MAAM,MAAM,QAAQ,GAChB,MAAM,GACN,MAAM,GACN,SAAS,GACT,aAAa,GACb,YAAY,GACZ,WAAW,GACX,qBAAqB,GACrB,MAAM,GACN,UAAU,CAAC;AAEf,MAAM,MAAM,UAAU,GAClB,SAAS,GACT,OAAO,GACP,aAAa,GACb,SAAS,GACT,MAAM,CAAC;AAEX,MAAM,MAAM,MAAM,GAAG,IAAI,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,GAAG,IAAI,CAAC;AAEnD,MAAM,MAAM,YAAY,GACpB,WAAW,GACX,UAAU,GACV,YAAY,GACZ,QAAQ,GACR,YAAY,GACZ,eAAe,GACf,YAAY,GACZ,cAAc,CAAC;AAEnB,MAAM,WAAW,SAAS;IACxB,IAAI,EAAE,MAAM,CAAC;IACb,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,OAAO,CAAC,EAAE,MAAM,CAAC;IACjB,UAAU,CAAC,EAAE,MAAM,CAAC;CACrB;AAED,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,QAAQ,CAAC;IACf,KAAK,EAAE,MAAM,CAAC;IACd,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,MAAM,EAAE,UAAU,CAAC;IACnB,QAAQ,EAAE,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,GAAG,CAAC,CAAC;IAC5B,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,eAAe,CAAC,EAAE,MAAM,CAAC;IACzB,IAAI,CAAC,EAAE,MAAM,EAAE,CAAC;IAChB,QAAQ,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACzB,MAAM,CAAC,EAAE,MAAM,GAAG,IAAI,CAAC;IACvB,SAAS,CAAC,EAAE,SAAS,CAAC;IACtB,kBAAkB,CAAC,EAAE,MAAM,EAAE,CAAC;IAC9B,OAAO,CAAC,EAAE,OAAO,CAAC;IAClB,QAAQ,CAAC,EAAE;QACT,QAAQ,CAAC,EAAE,OAAO,CAAC;QACnB,MAAM,CAAC,EAAE,MAAM,CAAC;QAChB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;KACxB,CAAC;IACF,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,SAAS;IACxB,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,EAAE,EAAE,MAAM,CAAC;IACX,YAAY,EAAE,YAAY,CAAC;IAC3B,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,QAAQ,CAAC,EAAE;QACT,QAAQ,CAAC,EAAE,OAAO,CAAC;QACnB,UAAU,CAAC,EAAE,MAAM,CAAC;QACpB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;KACxB,CAAC;IACF,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,YAAY;IAC3B,IAAI,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;IAC7B,gBAAgB,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;IAC3C,cAAc,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;IACzC,cAAc,EAAE,MAAM,CAAC,MAAM,EAAE,MAAM,EAAE,CAAC,CAAC;CAC1C;AAED,MAAM,WAAW,YAAY;IAC3B,EAAE,EAAE,MAAM,CAAC;IACX,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,CAAC,EAAE,MAAM,CAAC;IAChB,SAAS,EAAE,MAAM,CAAC;IAClB,SAAS,EAAE,MAAM,CAAC;CACnB;AAED,MAAM,WAAW,SAAS;IACxB,WAAW,EAAE,MAAM,EAAE,CAAC;IACtB,UAAU,EAAE,MAAM,GAAG,IAAI,CAAC;CAC3B;AAED,MAAM,WAAW,aAAa;IAC5B,OAAO,EAAE,MAAM,CAAC;IAChB,OAAO,EAAE,YAAY,CAAC;IACtB,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,KAAK,EAAE,SAAS,EAAE,CAAC;IACnB,OAAO,EAAE,YAAY,CAAC;IACtB,IAAI,EAAE,SAAS,CAAC;CACjB"}

package/dist/core/insights/bottleneck-detector.js

@@ -68,7 +68,7 @@ export function detectBottlenecks(doc) {
         n.estimateMinutes != null &&
         n.estimateMinutes > OVERSIZE_THRESHOLD_MINUTES &&
         !hasChildren(n.id))
-        .map((n) => ({ id: n.id, title: n.title, estimateMinutes: n.estimateMinutes }));
+        .map((n) => ({ id: n.id, title: n.title, estimateMinutes: n.estimateMinutes ?? 0 }));
     logger.info("Bottleneck detection complete", {
         blocked: blockedTasks.length,
         missingAC: missingAcceptanceCriteria.length,

package/dist/core/insights/bottleneck-detector.js.map

@@ -1 +1 @@
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package/dist/core/integrations/enriched-context.d.ts

@@ -1,24 +1,28 @@
 /**
- * Enriched Context Builder — combines Serena memories with GitNexus data
+ * Enriched Context Builder — combines project memories with native Code Intelligence
  * for a unified symbol context. All data sourced locally.
  */
+import type { CodeGraphData } from "../code/code-types.js";
 export interface EnrichedContext {
     symbol: string;
-    serena: {
+    memories: {
         available: boolean;
         relevantMemories: Array<{
             name: string;
             excerpt: string;
         }>;
     };
-    gitnexus: {
+    codeGraph: {
         available: boolean;
-        data?: unknown;
+        data?: CodeGraphData;
     };
     combined: string;
 }
 /**
- * Build enriched context for a symbol by combining Serena + GitNexus data.
+ * Build enriched context for a symbol by combining project memories + native Code Intelligence.
  */
-export declare function buildEnrichedContext(symbol: string, basePath: string, gitnexusPort?: number): Promise<EnrichedContext>;
+export declare function buildEnrichedContext(symbol: string, basePath: string, _unused?: number, options?: {
+    db?: import("better-sqlite3").Database;
+    projectId?: string;
+}): Promise<EnrichedContext>;
 //# sourceMappingURL=enriched-context.d.ts.map

package/dist/core/integrations/enriched-context.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"enriched-context.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/enriched-context.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAOH,OAAO,KAAK,EAAE,aAAa,EAAE,MAAM,uBAAuB,CAAC;AAE3D,MAAM,WAAW,eAAe;IAC9B,MAAM,EAAE,MAAM,CAAC;IACf,QAAQ,EAAE;QACR,SAAS,EAAE,OAAO,CAAC;QACnB,gBAAgB,EAAE,KAAK,CAAC;YAAE,IAAI,EAAE,MAAM,CAAC;YAAC,OAAO,EAAE,MAAM,CAAA;SAAE,CAAC,CAAC;KAC5D,CAAC;IACF,SAAS,EAAE;QACT,SAAS,EAAE,OAAO,CAAC;QACnB,IAAI,CAAC,EAAE,aAAa,CAAC;KACtB,CAAC;IACF,QAAQ,EAAE,MAAM,CAAC;CAClB;AA8CD;;GAEG;AACH,wBAAsB,oBAAoB,CACxC,MAAM,EAAE,MAAM,EACd,QAAQ,EAAE,MAAM,EAChB,OAAO,CAAC,EAAE,MAAM,EAChB,OAAO,CAAC,EAAE;IAAE,EAAE,CAAC,EAAE,OAAO,gBAAgB,EAAE,QAAQ,CAAC;IAAC,SAAS,CAAC,EAAE,MAAM,CAAA;CAAE,GACvE,OAAO,CAAC,eAAe,CAAC,CAoD1B"}

package/dist/core/integrations/enriched-context.js

@@ -1,10 +1,12 @@
 /**
- * Enriched Context Builder — combines Serena memories with GitNexus data
+ * Enriched Context Builder — combines project memories with native Code Intelligence
  * for a unified symbol context. All data sourced locally.
  */
-import { readAllSerenaMemories } from "./serena-reader.js";
-import { isGitNexusRunning } from "./gitnexus-launcher.js";
+import { readAllMemories } from "../memory/memory-reader.js";
+import { migrateSerenaMemories } from "../memory/memory-migrator.js";
 import { logger } from "../utils/logger.js";
+import { CodeStore } from "../code/code-store.js";
+import { getSymbolContext } from "../code/graph-traversal.js";
 /**
  * Filter memories that mention the given symbol (case-insensitive).
  */
@@ -13,7 +15,6 @@ function filterRelevantMemories(memories, symbol) {
     return memories
         .filter((m) => m.content.toLowerCase().includes(lower))
         .map((m) => {
-        // Extract relevant excerpt — lines containing the symbol
         const lines = m.content.split("\n");
         const relevant = lines.filter((l) => l.toLowerCase().includes(lower));
         const excerpt = relevant.slice(0, 5).join("\n") || m.content.slice(0, 200);
@@ -21,68 +22,67 @@ function filterRelevantMemories(memories, symbol) {
     });
 }
 /**
- * Try to fetch GitNexus context for a symbol.
+ * Query native Code Intelligence engine for symbol context.
  */
-async function fetchGitNexusContext(symbol, port) {
-    const running = await isGitNexusRunning(port);
-    if (!running) {
+function fetchCodeContext(symbol, db, projectId) {
+    if (!db)
         return { available: false };
-    }
     try {
-        const res = await fetch(`http://localhost:${port}/api/context`, {
-            method: "POST",
-            headers: { "Content-Type": "application/json" },
-            body: JSON.stringify({ symbol }),
-        });
-        if (!res.ok) {
-            return { available: true, data: null };
-        }
-        const data = await res.json();
-        return { available: true, data };
+        const codeStore = new CodeStore(db);
+        const meta = codeStore.getIndexMeta(projectId);
+        if (!meta)
+            return { available: false };
+        const context = getSymbolContext(codeStore, symbol, projectId);
+        return {
+            available: true,
+            data: context.symbols.length > 0 ? context : undefined,
+        };
     }
     catch {
         return { available: false };
     }
 }
 /**
- * Build enriched context for a symbol by combining Serena + GitNexus data.
+ * Build enriched context for a symbol by combining project memories + native Code Intelligence.
  */
-export async function buildEnrichedContext(symbol, basePath, gitnexusPort = 3737) {
+export async function buildEnrichedContext(symbol, basePath, _unused, options) {
     logger.info("Building enriched context", { symbol, basePath });
+    // Lazy migration: copy .serena/memories → workflow-graph/memories if needed
+    await migrateSerenaMemories(basePath);
     // Fetch data from both sources in parallel
-    const [memories, gitnexus] = await Promise.all([
-        readAllSerenaMemories(basePath),
-        fetchGitNexusContext(symbol, gitnexusPort),
+    const [memories, codeGraph] = await Promise.all([
+        readAllMemories(basePath),
+        Promise.resolve(fetchCodeContext(symbol, options?.db ?? null, options?.projectId ?? "default")),
     ]);
-    const serenaAvailable = memories.length > 0;
+    const memoriesAvailable = memories.length > 0;
     const relevantMemories = filterRelevantMemories(memories, symbol);
     // Build combined summary
     const parts = [`Symbol: ${symbol}`];
     if (relevantMemories.length > 0) {
-        parts.push(`\nSerena Memories (${relevantMemories.length} relevant):`);
+        parts.push(`\nMemories (${relevantMemories.length} relevant):`);
         for (const mem of relevantMemories) {
             parts.push(`  [${mem.name}] ${mem.excerpt.split("\n")[0]}`);
         }
     }
-    if (gitnexus.available && gitnexus.data) {
-        parts.push("\nGitNexus Context: Available (see gitnexus.data)");
+    if (codeGraph.available && codeGraph.data) {
+        parts.push(`\nCode Graph: ${codeGraph.data.symbols.length} symbols, ${codeGraph.data.relations.length} relations`);
     }
-    else if (!gitnexus.available) {
-        parts.push("\nGitNexus: Not available");
+    else if (!codeGraph.available) {
+        parts.push("\nCode Intelligence: Not indexed. Run reindex first.");
     }
     const combined = parts.join("\n");
     logger.info("Enriched context built", {
         symbol,
-        serenaMemories: relevantMemories.length,
-        gitnexusAvailable: gitnexus.available,
+        memories: relevantMemories.length,
+        codeGraphAvailable: codeGraph.available,
     });
     return {
         symbol,
-        serena: {
-            available: serenaAvailable,
+        memories: {
+            available: memoriesAvailable,
             relevantMemories,
         },
-        gitnexus,
+        codeGraph,
         combined,
     };
 }

package/dist/core/integrations/enriched-context.js.map

@@ -1 +1 @@
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+{"version":3,"file":"enriched-context.js","sourceRoot":"","sources":["../../../src/core/integrations/enriched-context.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,OAAO,EAAE,eAAe,EAAsB,MAAM,4BAA4B,CAAC;AACjF,OAAO,EAAE,qBAAqB,EAAE,MAAM,8BAA8B,CAAC;AACrE,OAAO,EAAE,MAAM,EAAE,MAAM,oBAAoB,CAAC;AAC5C,OAAO,EAAE,SAAS,EAAE,MAAM,uBAAuB,CAAC;AAClD,OAAO,EAAE,gBAAgB,EAAE,MAAM,4BAA4B,CAAC;AAgB9D;;GAEG;AACH,SAAS,sBAAsB,CAC7B,QAAyB,EACzB,MAAc;IAEd,MAAM,KAAK,GAAG,MAAM,CAAC,WAAW,EAAE,CAAC;IAEnC,OAAO,QAAQ;SACZ,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,OAAO,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC;SACtD,GAAG,CAAC,CAAC,CAAC,EAAE,EAAE;QACT,MAAM,KAAK,GAAG,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC;QACpC,MAAM,QAAQ,GAAG,KAAK,CAAC,MAAM,CAAC,CAAC,CAAC,EAAE,EAAE,CAAC,CAAC,CAAC,WAAW,EAAE,CAAC,QAAQ,CAAC,KAAK,CAAC,CAAC,CAAC;QACtE,MAAM,OAAO,GAAG,QAAQ,CAAC,KAAK,CAAC,CAAC,EAAE,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC,OAAO,CAAC,KAAK,CAAC,CAAC,EAAE,GAAG,CAAC,CAAC;QAC3E,OAAO,EAAE,IAAI,EAAE,CAAC,CAAC,IAAI,EAAE,OAAO,EAAE,CAAC;IACnC,CAAC,CAAC,CAAC;AACP,CAAC;AAED;;GAEG;AACH,SAAS,gBAAgB,CACvB,MAAc,EACd,EAA4C,EAC5C,SAAiB;IAEjB,IAAI,CAAC,EAAE;QAAE,OAAO,EAAE,SAAS,EAAE,KAAK,EAAE,CAAC;IAErC,IAAI,CAAC;QACH,MAAM,SAAS,GAAG,IAAI,SAAS,CAAC,EAAE,CAAC,CAAC;QACpC,MAAM,IAAI,GAAG,SAAS,CAAC,YAAY,CAAC,SAAS,CAAC,CAAC;QAC/C,IAAI,CAAC,IAAI;YAAE,OAAO,EAAE,SAAS,EAAE,KAAK,EAAE,CAAC;QAEvC,MAAM,OAAO,GAAG,gBAAgB,CAAC,SAAS,EAAE,MAAM,EAAE,SAAS,CAAC,CAAC;QAC/D,OAAO;YACL,SAAS,EAAE,IAAI;YACf,IAAI,EAAE,OAAO,CAAC,OAAO,CAAC,MAAM,GAAG,CAAC,CAAC,CAAC,CAAC,OAAO,CAAC,CAAC,CAAC,SAAS;SACvD,CAAC;IACJ,CAAC;IAAC,MAAM,CAAC;QACP,OAAO,EAAE,SAAS,EAAE,KAAK,EAAE,CAAC;IAC9B,CAAC;AACH,CAAC;AAED;;GAEG;AACH,MAAM,CAAC,KAAK,UAAU,oBAAoB,CACxC,MAAc,EACd,QAAgB,EAChB,OAAgB,EAChB,OAAwE;IAExE,MAAM,CAAC,IAAI,CAAC,2BAA2B,EAAE,EAAE,MAAM,EAAE,QAAQ,EAAE,CAAC,CAAC;IAE/D,4EAA4E;IAC5E,MAAM,qBAAqB,CAAC,QAAQ,CAAC,CAAC;IAEtC,2CAA2C;IAC3C,MAAM,CAAC,QAAQ,EAAE,SAAS,CAAC,GAAG,MAAM,OAAO,CAAC,GAAG,CAAC;QAC9C,eAAe,CAAC,QAAQ,CAAC;QACzB,OAAO,CAAC,OAAO,CAAC,gBAAgB,CAC9B,MAAM,EACN,OAAO,EAAE,EAAE,IAAI,IAAI,EACnB,OAAO,EAAE,SAAS,IAAI,SAAS,CAChC,CAAC;KACH,CAAC,CAAC;IAEH,MAAM,iBAAiB,GAAG,QAAQ,CAAC,MAAM,GAAG,CAAC,CAAC;IAC9C,MAAM,gBAAgB,GAAG,sBAAsB,CAAC,QAAQ,EAAE,MAAM,CAAC,CAAC;IAElE,yBAAyB;IACzB,MAAM,KAAK,GAAa,CAAC,WAAW,MAAM,EAAE,CAAC,CAAC;IAE9C,IAAI,gBAAgB,CAAC,MAAM,GAAG,CAAC,EAAE,CAAC;QAChC,KAAK,CAAC,IAAI,CAAC,eAAe,gBAAgB,CAAC,MAAM,aAAa,CAAC,CAAC;QAChE,KAAK,MAAM,GAAG,IAAI,gBAAgB,EAAE,CAAC;YACnC,KAAK,CAAC,IAAI,CAAC,MAAM,GAAG,CAAC,IAAI,KAAK,GAAG,CAAC,OAAO,CAAC,KAAK,CAAC,IAAI,CAAC,CAAC,CAAC,CAAC,EAAE,CAAC,CAAC;QAC9D,CAAC;IACH,CAAC;IAED,IAAI,SAAS,CAAC,SAAS,IAAI,SAAS,CAAC,IAAI,EAAE,CAAC;QAC1C,KAAK,CAAC,IAAI,CAAC,iBAAiB,SAAS,CAAC,IAAI,CAAC,OAAO,CAAC,MAAM,aAAa,SAAS,CAAC,IAAI,CAAC,SAAS,CAAC,MAAM,YAAY,CAAC,CAAC;IACrH,CAAC;SAAM,IAAI,CAAC,SAAS,CAAC,SAAS,EAAE,CAAC;QAChC,KAAK,CAAC,IAAI,CAAC,sDAAsD,CAAC,CAAC;IACrE,CAAC;IAED,MAAM,QAAQ,GAAG,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,CAAC;IAElC,MAAM,CAAC,IAAI,CAAC,wBAAwB,EAAE;QACpC,MAAM;QACN,QAAQ,EAAE,gBAAgB,CAAC,MAAM;QACjC,kBAAkB,EAAE,SAAS,CAAC,SAAS;KACxC,CAAC,CAAC;IAEH,OAAO;QACL,MAAM;QACN,QAAQ,EAAE;YACR,SAAS,EAAE,iBAAiB;YAC5B,gBAAgB;SACjB;QACD,SAAS;QACT,QAAQ;KACT,CAAC;AACJ,CAAC"}

package/dist/core/integrations/integration-orchestrator.js

@@ -46,7 +46,7 @@ export class IntegrationOrchestrator {
     getStatuses() {
         // Refresh document counts
         const knowledgeStore = new KnowledgeStore(this.store.getDb());
-        const sourceTypes = ["upload", "serena", "code_context", "docs", "web_capture"];
+        const sourceTypes = ["upload", "memory", "serena", "code_context", "docs", "web_capture"];
         for (const st of sourceTypes) {
             const existing = this.statuses.get(st);
             if (existing) {
@@ -95,7 +95,7 @@ export class IntegrationOrchestrator {
         logger.info("Orchestrator: knowledge indexed", { source, count: event.payload.documentsIndexed });
     }
     initStatuses() {
-        const sourceTypes = ["upload", "serena", "code_context", "docs", "web_capture"];
+        const sourceTypes = ["upload", "memory", "serena", "code_context", "docs", "web_capture"];
         const knowledgeStore = new KnowledgeStore(this.store.getDb());
         for (const st of sourceTypes) {
             this.statuses.set(st, {

package/dist/core/integrations/integration-orchestrator.js.map

@@ -1 +1 @@
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+{"version":3,"file":"integration-orchestrator.js","sourceRoot":"","sources":["../../../src/core/integrations/integration-orchestrator.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAKH,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAC;AAC7D,OAAO,EAAE,cAAc,EAAE,MAAM,6BAA6B,CAAC;AAC7D,OAAO,EAAE,cAAc,EAAE,MAAM,2BAA2B,CAAC;AAC3D,OAAO,EAAE,eAAe,EAAE,MAAM,wBAAwB,CAAC;AACzD,OAAO,EAAE,kBAAkB,EAAE,MAAM,wBAAwB,CAAC;AAC5D,OAAO,EAAE,MAAM,EAAE,MAAM,oBAAoB,CAAC;AAiB5C,MAAM,OAAO,uBAAuB;IAC1B,KAAK,CAAc;IACnB,QAAQ,CAAgB;IACxB,QAAQ,CAAS;IACjB,WAAW,CAAU;IACrB,QAAQ,GAAG,IAAI,GAAG,EAA6B,CAAC;IAExD,YACE,KAAkB,EAClB,QAAuB,EACvB,OAA6B;QAE7B,IAAI,CAAC,KAAK,GAAG,KAAK,CAAC;QACnB,IAAI,CAAC,QAAQ,GAAG,QAAQ,CAAC;QACzB,IAAI,CAAC,QAAQ,GAAG,OAAO,EAAE,QAAQ,IAAI,OAAO,CAAC,GAAG,EAAE,CAAC;QACnD,IAAI,CAAC,WAAW,GAAG,OAAO,EAAE,WAAW,IAAI,IAAI,CAAC;QAEhD,IAAI,CAAC,YAAY,EAAE,CAAC;IACtB,CAAC;IAED;;OAEG;IACH,QAAQ;QACN,IAAI,IAAI,CAAC,WAAW,EAAE,CAAC;YACrB,IAAI,CAAC,QAAQ,CAAC,EAAE,CAAC,kBAAkB,EAAE,CAAC,KAAK,EAAE,EAAE;gBAC7C,KAAK,IAAI,CAAC,iBAAiB,CAAC,KAAK,CAAC,CAAC;YACrC,CAAC,CAAC,CAAC;QACL,CAAC;QAED,IAAI,CAAC,QAAQ,CAAC,EAAE,CAAC,mBAAmB,EAAE,CAAC,KAAK,EAAE,EAAE;YAC9C,IAAI,CAAC,kBAAkB,CAAC,KAAK,CAAC,CAAC;QACjC,CAAC,CAAC,CAAC;QAEH,MAAM,CAAC,IAAI,CAAC,oCAAoC,EAAE,EAAE,WAAW,EAAE,IAAI,CAAC,WAAW,EAAE,CAAC,CAAC;IACvF,CAAC;IAED;;OAEG;IACH,WAAW;QACT,0BAA0B;QAC1B,MAAM,cAAc,GAAG,IAAI,cAAc,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,EAAE,CAAC,CAAC;QAC9D,MAAM,WAAW,GAAG,CAAC,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,cAAc,EAAE,MAAM,EAAE,aAAa,CAAU,CAAC;QAEnG,KAAK,MAAM,EAAE,IAAI,WAAW,EAAE,CAAC;YAC7B,MAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,CAAC,CAAC;YACvC,IAAI,QAAQ,EAAE,CAAC;gBACb,QAAQ,CAAC,aAAa,GAAG,cAAc,CAAC,KAAK,CAAC,EAAE,CAAC,CAAC;YACpD,CAAC;QACH,CAAC;QAED,OAAO,KAAK,CAAC,IAAI,CAAC,IAAI,CAAC,QAAQ,CAAC,MAAM,EAAE,CAAC,CAAC;IAC5C,CAAC;IAED;;OAEG;IACK,KAAK,CAAC,iBAAiB,CAAC,KAAiB;QAC/C,MAAM,CAAC,IAAI,CAAC,4CAA4C,EAAE,KAAK,CAAC,OAAO,CAAC,CAAC;QAEzE,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,SAAS,CAAC,CAAC;QAErC,IAAI,CAAC;YACH,MAAM,cAAc,GAAG,IAAI,cAAc,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,EAAE,CAAC,CAAC;YAC9D,MAAM,cAAc,GAAG,IAAI,cAAc,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,EAAE,CAAC,CAAC;YAE9D,sBAAsB;YACtB,MAAM,UAAU,GAAG,eAAe,CAAC,cAAc,EAAE,cAAc,CAAC,CAAC;YAEnE,qBAAqB;YACrB,MAAM,cAAc,GAAG,IAAI,cAAc,CAAC,IAAI,CAAC,KAAK,CAAC,CAAC;YACtD,cAAc,CAAC,KAAK,EAAE,CAAC;YACvB,MAAM,SAAS,GAAG,MAAM,kBAAkB,CAAC,IAAI,CAAC,KAAK,EAAE,cAAc,CAAC,CAAC;YAEvE,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,MAAM,CAAC,CAAC;YAElC,IAAI,CAAC,QAAQ,CAAC,SAAS,CAAC,mBAAmB,EAAE;gBAC3C,MAAM,EAAE,gBAAgB;gBACxB,gBAAgB,EAAE,UAAU,CAAC,gBAAgB,GAAG,SAAS,CAAC,KAAK,GAAG,SAAS,CAAC,SAAS;aACtF,CAAC,CAAC;YAEH,MAAM,CAAC,IAAI,CAAC,gCAAgC,EAAE;gBAC5C,WAAW,EAAE,UAAU,CAAC,gBAAgB;gBACxC,cAAc,EAAE,SAAS,CAAC,KAAK;gBAC/B,kBAAkB,EAAE,SAAS,CAAC,SAAS;aACxC,CAAC,CAAC;QACL,CAAC;QAAC,OAAO,GAAG,EAAE,CAAC;YACb,MAAM,OAAO,GAAG,GAAG,YAAY,KAAK,CAAC,CAAC,CAAC,GAAG,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,GAAG,CAAC,CAAC;YACjE,IAAI,CAAC,YAAY,CAAC,MAAM,EAAE,OAAO,EAAE,OAAO,CAAC,CAAC;YAC5C,MAAM,CAAC,KAAK,CAAC,8BAA8B,EAAE,EAAE,KAAK,EAAE,OAAO,EAAE,CAAC,CAAC;QACnE,CAAC;IACH,CAAC;IAED;;OAEG;IACK,kBAAkB,CAAC,KAAiB;QAC1C,MAAM,MAAM,GAAG,MAAM,CAAC,KAAK,CAAC,OAAO,CAAC,MAAM,IAAI,SAAS,CAAC,CAAC;QACzD,MAAM,CAAC,IAAI,CAAC,iCAAiC,EAAE,EAAE,MAAM,EAAE,KAAK,EAAE,KAAK,CAAC,OAAO,CAAC,gBAAgB,EAAE,CAAC,CAAC;IACpG,CAAC;IAEO,YAAY;QAClB,MAAM,WAAW,GAAG,CAAC,QAAQ,EAAE,QAAQ,EAAE,QAAQ,EAAE,cAAc,EAAE,MAAM,EAAE,aAAa,CAAU,CAAC;QACnG,MAAM,cAAc,GAAG,IAAI,cAAc,CAAC,IAAI,CAAC,KAAK,CAAC,KAAK,EAAE,CAAC,CAAC;QAE9D,KAAK,MAAM,EAAE,IAAI,WAAW,EAAE,CAAC;YAC7B,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,EAAE,EAAE;gBACpB,MAAM,EAAE,EAAE;gBACV,QAAQ,EAAE,IAAI;gBACd,aAAa,EAAE,cAAc,CAAC,KAAK,CAAC,EAAE,CAAC;gBACvC,MAAM,EAAE,MAAM;aACf,CAAC,CAAC;QACL,CAAC;IACH,CAAC;IAEO,YAAY,CAAC,MAAc,EAAE,MAAmC,EAAE,KAAc;QACtF,MAAM,QAAQ,GAAG,IAAI,CAAC,QAAQ,CAAC,GAAG,CAAC,MAAM,CAAC,CAAC;QAC3C,IAAI,QAAQ,EAAE,CAAC;YACb,QAAQ,CAAC,MAAM,GAAG,MAAM,CAAC;YACzB,QAAQ,CAAC,QAAQ,GAAG,MAAM,KAAK,MAAM,CAAC,CAAC,CAAC,IAAI,IAAI,EAAE,CAAC,WAAW,EAAE,CAAC,CAAC,CAAC,QAAQ,CAAC,QAAQ,CAAC;YACrF,QAAQ,CAAC,KAAK,GAAG,KAAK,CAAC;QACzB,CAAC;IACH,CAAC;CACF"}

package/dist/core/integrations/mcp-deps-installer.d.ts

@@ -1,6 +1,6 @@
 /**
  * MCP dependencies installer.
- * Detects and installs ecosystem tools (GitNexus, Serena, Context7, Playwright).
+ * Detects ecosystem tools (Context7, Playwright).
  * Never throws — returns InstallResult[] with status for each dependency.
  */
 export type InstallStatus = "installed" | "already_available" | "skipped" | "failed";

package/dist/core/integrations/mcp-deps-installer.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"mcp-deps-installer.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/mcp-deps-installer.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AASH,MAAM,MAAM,aAAa,GAAG,WAAW,GAAG,mBAAmB,GAAG,SAAS,GAAG,QAAQ,CAAC;AAErF,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,aAAa,CAAC;IACtB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED;;GAEG;AACH,wBAAsB,kBAAkB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAO1E;AAiGD;;;GAGG;AACH,wBAAsB,iBAAiB,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,EAAE,CAAC,CAcnF"}
+{"version":3,"file":"mcp-deps-installer.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/mcp-deps-installer.ts"],"names":[],"mappings":"AAAA;;;;GAIG;AASH,MAAM,MAAM,aAAa,GAAG,WAAW,GAAG,mBAAmB,GAAG,SAAS,GAAG,QAAQ,CAAC;AAErF,MAAM,WAAW,aAAa;IAC5B,IAAI,EAAE,MAAM,CAAC;IACb,MAAM,EAAE,aAAa,CAAC;IACtB,OAAO,EAAE,MAAM,CAAC;CACjB;AAED;;GAEG;AACH,wBAAsB,kBAAkB,CAAC,OAAO,EAAE,MAAM,GAAG,OAAO,CAAC,OAAO,CAAC,CAO1E;AA0BD;;;GAGG;AACH,wBAAsB,iBAAiB,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,aAAa,EAAE,CAAC,CAYnF"}

package/dist/core/integrations/mcp-deps-installer.js

@@ -1,6 +1,6 @@
 /**
  * MCP dependencies installer.
- * Detects and installs ecosystem tools (GitNexus, Serena, Context7, Playwright).
+ * Detects ecosystem tools (Context7, Playwright).
  * Never throws — returns InstallResult[] with status for each dependency.
  */
 import { execFile } from "node:child_process";
@@ -20,63 +20,6 @@ export async function isCommandAvailable(command) {
         return false;
     }
 }
-/**
- * Run a shell command and return success/failure.
- */
-async function runCommand(cmd, args, timeoutMs = 60000) {
-    try {
-        const { stdout, stderr } = await execAsync(cmd, args, { timeout: timeoutMs });
-        return { ok: true, output: stdout || stderr };
-    }
-    catch (err) {
-        const message = err instanceof Error ? err.message : String(err);
-        return { ok: false, output: message };
-    }
-}
-async function checkGitNexus() {
-    const name = "gitnexus";
-    const available = await isCommandAvailable("gitnexus");
-    if (available) {
-        logger.info("GitNexus already available", { name });
-        return { name, status: "already_available", message: "gitnexus command found in PATH" };
-    }
-    // Try to verify via npx
-    const npxCheck = await runCommand("npx", ["-y", "gitnexus", "--version"], 30000);
-    if (npxCheck.ok) {
-        logger.success("GitNexus available via npx", { name });
-        return { name, status: "already_available", message: "gitnexus available via npx" };
-    }
-    logger.warn("GitNexus not available", { name, error: npxCheck.output });
-    return { name, status: "failed", message: `gitnexus not available: ${npxCheck.output}` };
-}
-async function checkSerena() {
-    const name = "serena";
-    // Check if uvx is available
-    const uvxAvailable = await isCommandAvailable("uvx");
-    if (uvxAvailable) {
-        logger.info("uvx already available, Serena can be used", { name });
-        return { name, status: "already_available", message: "uvx available — serena can run via uvx" };
-    }
-    // Check if pip/pip3 is available to install uvx
-    const pipCmd = (await isCommandAvailable("pip3")) ? "pip3" : (await isCommandAvailable("pip")) ? "pip" : null;
-    if (!pipCmd) {
-        logger.warn("Python/pip not available, skipping Serena install", { name });
-        return {
-            name,
-            status: "skipped",
-            message: "Python/pip not available. Install Python 3 and run: pip install uvx",
-        };
-    }
-    // Try to install uvx via pip
-    logger.info("Installing uvx via pip", { name, pip: pipCmd });
-    const uvxInstall = await runCommand(pipCmd, ["install", "uvx"], 120000);
-    if (!uvxInstall.ok) {
-        logger.warn("Failed to install uvx", { name, error: uvxInstall.output });
-        return { name, status: "failed", message: `Failed to install uvx: ${uvxInstall.output}` };
-    }
-    logger.success("uvx installed, Serena ready", { name });
-    return { name, status: "installed", message: "uvx installed via pip — serena ready" };
-}
 async function checkContext7() {
     const name = "context7";
     const npxAvailable = await isCommandAvailable("npx");
@@ -102,8 +45,6 @@ async function checkPlaywright() {
 export async function installAllMcpDeps(_basePath) {
     logger.info("Checking MCP ecosystem dependencies");
     const results = await Promise.all([
-        checkGitNexus(),
-        checkSerena(),
         checkContext7(),
         checkPlaywright(),
     ]);

package/dist/core/integrations/mcp-deps-installer.js.map

@@ -1 +1 @@
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package/dist/core/integrations/mcp-servers-config.d.ts

@@ -2,7 +2,7 @@
  * Centralized MCP server configuration for all ecosystem tools.
  * Generates the complete .mcp.json config with all integrated servers.
  */
-export declare const MCP_SERVER_NAMES: readonly ["mcp-graph", "gitnexus", "serena", "context7", "playwright"];
+export declare const MCP_SERVER_NAMES: readonly ["mcp-graph", "context7", "playwright"];
 export type McpServerName = (typeof MCP_SERVER_NAMES)[number];
 export interface McpServerEntry {
     command: string;

package/dist/core/integrations/mcp-servers-config.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"mcp-servers-config.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/mcp-servers-config.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,eAAO,MAAM,gBAAgB,wEAMnB,CAAC;AAEX,MAAM,MAAM,aAAa,GAAG,CAAC,OAAO,gBAAgB,CAAC,CAAC,MAAM,CAAC,CAAC;AAE9D,MAAM,WAAW,cAAc;IAC7B,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,EAAE,CAAC;IACf,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,gBAAgB;IAC/B,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,cAAc,CAAC,CAAC;CAC5C;AAkCD;;;;GAIG;AACH,wBAAgB,qBAAqB,CACnC,QAAQ,CAAC,EAAE,OAAO,CAAC,gBAAgB,CAAC,GACnC,gBAAgB,CAUlB"}
+{"version":3,"file":"mcp-servers-config.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/mcp-servers-config.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,eAAO,MAAM,gBAAgB,kDAInB,CAAC;AAEX,MAAM,MAAM,aAAa,GAAG,CAAC,OAAO,gBAAgB,CAAC,CAAC,MAAM,CAAC,CAAC;AAE9D,MAAM,WAAW,cAAc;IAC7B,OAAO,EAAE,MAAM,CAAC;IAChB,IAAI,EAAE,MAAM,EAAE,CAAC;IACf,IAAI,CAAC,EAAE,MAAM,CAAC;CACf;AAED,MAAM,WAAW,gBAAgB;IAC/B,UAAU,EAAE,MAAM,CAAC,MAAM,EAAE,cAAc,CAAC,CAAC;CAC5C;AAmBD;;;;GAIG;AACH,wBAAgB,qBAAqB,CACnC,QAAQ,CAAC,EAAE,OAAO,CAAC,gBAAgB,CAAC,GACnC,gBAAgB,CAUlB"}

package/dist/core/integrations/mcp-servers-config.js

@@ -4,8 +4,6 @@
  */
 export const MCP_SERVER_NAMES = [
     "mcp-graph",
-    "gitnexus",
-    "serena",
     "context7",
     "playwright",
 ];
@@ -15,21 +13,6 @@ function getDefaultServers() {
             command: "npx",
             args: ["-y", "@mcp-graph-workflow/mcp-graph"],
         },
-        gitnexus: {
-            command: "npx",
-            args: ["-y", "gitnexus", "mcp"],
-        },
-        serena: {
-            command: "uvx",
-            args: [
-                "--from",
-                "git+https://github.com/oraios/serena",
-                "serena",
-                "start-mcp-server",
-                "--project",
-                ".",
-            ],
-        },
         context7: {
             command: "npx",
             args: ["-y", "@upstash/context7-mcp"],

package/dist/core/integrations/mcp-servers-config.js.map

@@ -1 +1 @@
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+{"version":3,"file":"mcp-servers-config.js","sourceRoot":"","sources":["../../../src/core/integrations/mcp-servers-config.ts"],"names":[],"mappings":"AAAA;;;GAGG;AAEH,MAAM,CAAC,MAAM,gBAAgB,GAAG;IAC9B,WAAW;IACX,UAAU;IACV,YAAY;CACJ,CAAC;AAcX,SAAS,iBAAiB;IACxB,OAAO;QACL,WAAW,EAAE;YACX,OAAO,EAAE,KAAK;YACd,IAAI,EAAE,CAAC,IAAI,EAAE,+BAA+B,CAAC;SAC9C;QACD,QAAQ,EAAE;YACR,OAAO,EAAE,KAAK;YACd,IAAI,EAAE,CAAC,IAAI,EAAE,uBAAuB,CAAC;SACtC;QACD,UAAU,EAAE;YACV,OAAO,EAAE,KAAK;YACd,IAAI,EAAE,CAAC,wBAAwB,CAAC;SACjC;KACF,CAAC;AACJ,CAAC;AAED;;;;GAIG;AACH,MAAM,UAAU,qBAAqB,CACnC,QAAoC;IAEpC,MAAM,eAAe,GAAG,CAAC,QAAQ,EAAE,UAAU,IAAI,EAAE,CAAmC,CAAC;IACvF,MAAM,cAAc,GAAG,iBAAiB,EAAE,CAAC;IAE3C,OAAO;QACL,UAAU,EAAE;YACV,GAAG,eAAe;YAClB,GAAG,cAAc;SAClB;KACF,CAAC;AACJ,CAAC"}

package/dist/core/integrations/tool-status.d.ts

@@ -5,9 +5,14 @@ export interface ToolInfo {
     details?: Record<string, unknown>;
 }
 export interface IntegrationsStatus {
-    gitnexus: ToolInfo;
-    serena: ToolInfo & {
-        memories: string[];
+    codeGraph: ToolInfo & {
+        symbolCount: number;
+    };
+    memories: {
+        available: boolean;
+        count: number;
+        directory: string;
+        names: string[];
     };
     playwright: ToolInfo;
 }

package/dist/core/integrations/tool-status.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"tool-status.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/tool-status.ts"],"names":[],"mappings":"AAGA,MAAM,WAAW,QAAQ;IACvB,SAAS,EAAE,OAAO,CAAC;IACnB,OAAO,EAAE,OAAO,CAAC;IACjB,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACnC;AAED,MAAM,WAAW,kBAAkB;IACjC,QAAQ,EAAE,QAAQ,CAAC;IACnB,MAAM,EAAE,QAAQ,GAAG;QAAE,QAAQ,EAAE,MAAM,EAAE,CAAA;KAAE,CAAC;IAC1C,UAAU,EAAE,QAAQ,CAAC;CACtB;AAiED;;GAEG;AACH,wBAAsB,qBAAqB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CA+BzF"}
+{"version":3,"file":"tool-status.d.ts","sourceRoot":"","sources":["../../../src/core/integrations/tool-status.ts"],"names":[],"mappings":"AAMA,MAAM,WAAW,QAAQ;IACvB,SAAS,EAAE,OAAO,CAAC;IACnB,OAAO,EAAE,OAAO,CAAC;IACjB,GAAG,CAAC,EAAE,MAAM,CAAC;IACb,OAAO,CAAC,EAAE,MAAM,CAAC,MAAM,EAAE,OAAO,CAAC,CAAC;CACnC;AAED,MAAM,WAAW,kBAAkB;IACjC,SAAS,EAAE,QAAQ,GAAG;QAAE,WAAW,EAAE,MAAM,CAAA;KAAE,CAAC;IAC9C,QAAQ,EAAE;QAAE,SAAS,EAAE,OAAO,CAAC;QAAC,KAAK,EAAE,MAAM,CAAC;QAAC,SAAS,EAAE,MAAM,CAAC;QAAC,KAAK,EAAE,MAAM,EAAE,CAAA;KAAE,CAAC;IACpF,UAAU,EAAE,QAAQ,CAAC;CACtB;AAqDD;;GAEG;AACH,wBAAsB,qBAAqB,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAC,kBAAkB,CAAC,CA4BzF"}