@mc1global/opencode-jarvis 0.4.0 → 0.7.0

package/dist/application/rag/use-cases.js.map

@@ -1 +1 @@
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package/dist/domain/rag/repositories.d.ts

@@ -116,6 +116,8 @@ export interface DiscoveredFile {
     readonly relativePath: string;
     readonly extension: string;
     readonly sizeBytes: number;
+    /** File modification time in milliseconds since epoch. */
+    readonly mtimeMs: number;
 }
 /** Result of project analysis. */
 export interface ProjectAnalysis {
@@ -149,4 +151,44 @@ export interface FileDiscoveryPort {
      */
     createRagignore(directory: string, projectType: string): Promise<void>;
 }
+/**
+ * A record of a previously indexed file.
+ * Persisted by the registry to track what was indexed and when.
+ */
+export interface FileIndexRecord {
+    /** Relative path of the source file (stable across re-indexing). */
+    readonly relativePath: string;
+    /** Absolute path at last index time. */
+    readonly absolutePath: string;
+    /** File modification time (ms since epoch) at last index time. */
+    readonly mtimeMs: number;
+    /** Number of chunks created for this file. */
+    readonly chunkCount: number;
+}
+/**
+ * Result of computing the delta between discovered files and indexed files.
+ */
+export interface IndexDelta {
+    /** Files not in the registry — need full indexing. */
+    readonly toAdd: readonly DiscoveredFile[];
+    /** Files in the registry but with a newer mtime — need re-indexing. */
+    readonly toUpdate: readonly DiscoveredFile[];
+    /** Relative paths in the registry but no longer on disk — need removal. */
+    readonly toRemove: readonly string[];
+    /** Files in the registry with matching mtime — skip. */
+    readonly unchanged: readonly string[];
+}
+/**
+ * Port for persisting the file index registry.
+ * Tracks which files have been indexed with their modification times.
+ * Infrastructure implements with JSON file, SQLite, or other storage.
+ */
+export interface FileIndexRegistryPort {
+    /** Load all indexed file records for a workspace. */
+    loadRecords(workspace: string): Promise<readonly FileIndexRecord[]>;
+    /** Save all indexed file records for a workspace (replaces all). */
+    saveRecords(workspace: string, records: readonly FileIndexRecord[]): Promise<void>;
+    /** Clear all records for a workspace. */
+    clearRecords(workspace: string): Promise<void>;
+}
 //# sourceMappingURL=repositories.d.ts.map

package/dist/domain/rag/repositories.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"repositories.d.ts","sourceRoot":"","sources":["../../../src/domain/rag/repositories.ts"],"names":[],"mappings":"AAAA;;;;;;;;;GASG;AACH,OAAO,KAAK,EACV,aAAa,EACb,mBAAmB,EACnB,YAAY,EACZ,kBAAkB,EAClB,UAAU,EACV,WAAW,EACX,iBAAiB,EAClB,MAAM,oBAAoB,CAAC;AAI5B;;;GAGG;AACH,MAAM,WAAW,iBAAiB;IAChC;;;OAGG;IACH,KAAK,CAAC,IAAI,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,MAAM,EAAE,CAAC,CAAC;IAEhD;;;;OAIG;IACH,UAAU,CAAC,KAAK,EAAE,SAAS,MAAM,EAAE,GAAG,OAAO,CAAC,SAAS,CAAC,SAAS,MAAM,EAAE,CAAC,EAAE,CAAC,CAAC;IAE9E,+DAA+D;IAC/D,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;CAC7B;AAID,qCAAqC;AACrC,MAAM,WAAW,aAAa;IAC5B,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,SAAS,CAAC,EAAE,MAAM,CAAC;IAC5B,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAC;IAC/B,QAAQ,CAAC,UAAU,CAAC,EAAE,MAAM,CAAC;CAC9B;AAED,4CAA4C;AAC5C,MAAM,WAAW,mBAAmB;IAClC,QAAQ,CAAC,IAAI,EAAE,MAAM,CAAC;IACtB,QAAQ,CAAC,YAAY,CAAC,EAAE,MAAM,CAAC;CAChC;AAED;;;;;;GAMG;AACH,MAAM,WAAW,gBAAgB;IAG/B,wDAAwD;IACxD,WAAW,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAE9C,kDAAkD;IAClD,SAAS,CACP,SAAS,EAAE,MAAM,EACjB,MAAM,EAAE,SAAS;QACf,QAAQ,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC;QACnC,QAAQ,CAAC,QAAQ,EAAE,aAAa,CAAC;KAClC,EAAE,GACF,OAAO,CAAC,IAAI,CAAC,CAAC;IAEjB,qDAAqD;IACrD,cAAc,CAAC,SAAS,EAAE,MAAM,EAAE,MAAM,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,CAAC,CAAC;IAEnE,qDAAqD;IACrD,MAAM,CACJ,MAAM,EAAE,SAAS,MAAM,EAAE,EACzB,OAAO,EAAE,aAAa,GACrB,OAAO,CAAC,SAAS,YAAY,EAAE,CAAC,CAAC;IAEpC,4CAA4C;IAC5C,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,UAAU,CAAC,CAAC;IAEjD,uDAAuD;IACvD,UAAU,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAI7C,qDAAqD;IACrD,iBAAiB,IAAI,OAAO,CAAC,IAAI,CAAC,CAAC;IAEnC,6DAA6D;IAC7D,eAAe,CACb,MAAM,EAAE,SAAS;QACf,QAAQ,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAAC;QACnC,QAAQ,CAAC,QAAQ,EAAE,mBAAmB,CAAC;KACxC,EAAE,GACF,OAAO,CAAC,IAAI,CAAC,CAAC;IAEjB,sDAAsD;IACtD,YAAY,CACV,MAAM,EAAE,SAAS,MAAM,EAAE,EACzB,OAAO,EAAE,mBAAmB,GAC3B,OAAO,CAAC,SAAS,kBAAkB,EAAE,CAAC,CAAC;IAE1C,mCAAmC;IACnC,cAAc,IAAI,OAAO,CAAC,UAAU,CAAC,CAAC;IAEtC,8BAA8B;IAC9B,gBAAgB,IAAI,OAAO,CAAC,IAAI,CAAC,CAAC;IAElC,8DAA8D;IAC9D,iBAAiB,IAAI,OAAO,CAAC,OAAO,CAAC,CAAC;CACvC;AAID,iDAAiD;AACjD,MAAM,WAAW,SAAS;IACxB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,KAAK,EAAE,MAAM,CAAC;CACxB;AAED;;;GAGG;AACH,MAAM,WAAW,gBAAgB;IAC/B;;;;;;OAMG;IACH,KAAK,CACH,IAAI,EAAE,MAAM,EACZ,QAAQ,EAAE,iBAAiB,GAAG,SAAS,EACvC,MAAM,EAAE,WAAW,GAClB,OAAO,CAAC,SAAS,SAAS,EAAE,CAAC,CAAC;IAEjC;;;;;OAKG;IACH,cAAc,CACZ,IAAI,EAAE,MAAM,GACX,SAAS;QACV,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;QACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;QACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;QACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;KAC1B,EAAE,CAAC;CACL;AAID,4CAA4C;AAC5C,MAAM,WAAW,cAAc;IAC7B,QAAQ,CAAC,YAAY,EAAE,MAAM,CAAC;IAC9B,QAAQ,CAAC,YAAY,EAAE,MAAM,CAAC;IAC9B,QAAQ,CAAC,SAAS,EAAE,MAAM,CAAC;IAC3B,QAAQ,CAAC,SAAS,EAAE,MAAM,CAAC;IAC3B,0DAA0D;IAC1D,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;CAC1B;AAED,kCAAkC;AAClC,MAAM,WAAW,eAAe;IAC9B,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;IAC7B,QAAQ,CAAC,KAAK,EAAE,SAAS,cAAc,EAAE,CAAC;IAC1C,QAAQ,CAAC,aAAa,EAAE,MAAM,CAAC;IAC/B,QAAQ,CAAC,WAAW,EAAE,MAAM,CAAC;CAC9B;AAED;;;GAGG;AACH,MAAM,WAAW,iBAAiB;IAChC;;;;;OAKG;IACH,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,eAAe,CAAC,CAAC;IAEtD;;;;OAIG;IACH,QAAQ,CAAC,YAAY,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC,CAAC;IAEvD;;;;OAIG;IACH,eAAe,CAAC,SAAS,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;CACxE;AAID;;;GAGG;AACH,MAAM,WAAW,eAAe;IAC9B,oEAAoE;IACpE,QAAQ,CAAC,YAAY,EAAE,MAAM,CAAC;IAC9B,wCAAwC;IACxC,QAAQ,CAAC,YAAY,EAAE,MAAM,CAAC;IAC9B,kEAAkE;IAClE,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,8CAA8C;IAC9C,QAAQ,CAAC,UAAU,EAAE,MAAM,CAAC;CAC7B;AAED;;GAEG;AACH,MAAM,WAAW,UAAU;IACzB,sDAAsD;IACtD,QAAQ,CAAC,KAAK,EAAE,SAAS,cAAc,EAAE,CAAC;IAC1C,uEAAuE;IACvE,QAAQ,CAAC,QAAQ,EAAE,SAAS,cAAc,EAAE,CAAC;IAC7C,2EAA2E;IAC3E,QAAQ,CAAC,QAAQ,EAAE,SAAS,MAAM,EAAE,CAAC;IACrC,wDAAwD;IACxD,QAAQ,CAAC,SAAS,EAAE,SAAS,MAAM,EAAE,CAAC;CACvC;AAED;;;;GAIG;AACH,MAAM,WAAW,qBAAqB;IACpC,qDAAqD;IACrD,WAAW,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,eAAe,EAAE,CAAC,CAAC;IAEpE,oEAAoE;IACpE,WAAW,CAAC,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,SAAS,eAAe,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;IAEnF,yCAAyC;IACzC,YAAY,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC,CAAC;CAChD"}

package/dist/domain/rag/services.d.ts

@@ -50,6 +50,16 @@ export declare function extractSnippet(fileContent: string, chunkContent: string
  * @returns Detected project type or "Unknown"
  */
 export declare function detectProjectType(fileNames: ReadonlySet<string>): string;
+import type { DiscoveredFile, FileIndexRecord, IndexDelta } from "./repositories.js";
+/**
+ * Compute the delta between discovered files and previously indexed files.
+ * Pure domain logic — no I/O, no side effects.
+ *
+ * @param discovered - Files found on disk by file discovery
+ * @param indexed - File records from the persistent registry
+ * @returns Delta with toAdd, toUpdate, toRemove, and unchanged lists
+ */
+export declare function computeIndexDelta(discovered: readonly DiscoveredFile[], indexed: readonly FileIndexRecord[]): IndexDelta;
 /** Universal patterns that should always be in .ragignore. */
 export declare const UNIVERSAL_RAGIGNORE: readonly string[];
 /** Per-project-type ragignore patterns. */

package/dist/domain/rag/services.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"services.d.ts","sourceRoot":"","sources":["../../../src/domain/rag/services.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAIH;;;GAGG;AACH,MAAM,WAAW,aAAa;IAC5B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;CAC1B;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,sBAAsB,CAAC,QAAQ,EAAE,MAAM,GAAG,SAAS,aAAa,EAAE,CAgDjF;AAID;;;;;;;;;;;GAWG;AACH,wBAAgB,cAAc,CAC5B,WAAW,EAAE,MAAM,EACnB,YAAY,EAAE,MAAM,EACpB,YAAY,EAAE,MAAM,GACnB,MAAM,CAgCR;AAoBD;;;;;;GAMG;AACH,wBAAgB,iBAAiB,CAAC,SAAS,EAAE,WAAW,CAAC,MAAM,CAAC,GAAG,MAAM,CAQxE;AAID,8DAA8D;AAC9D,eAAO,MAAM,mBAAmB,EAAE,SAAS,MAAM,EA4BhD,CAAC;AAEF,2CAA2C;AAC3C,eAAO,MAAM,iBAAiB,EAAE,WAAW,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAoDnE,CAAC"}
+{"version":3,"file":"services.d.ts","sourceRoot":"","sources":["../../../src/domain/rag/services.ts"],"names":[],"mappings":"AAAA;;;;;;;;GAQG;AAIH;;;GAGG;AACH,MAAM,WAAW,aAAa;IAC5B,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;IACzB,QAAQ,CAAC,OAAO,EAAE,MAAM,CAAC;CAC1B;AAED;;;;;;;;;;GAUG;AACH,wBAAgB,sBAAsB,CAAC,QAAQ,EAAE,MAAM,GAAG,SAAS,aAAa,EAAE,CAgDjF;AAID;;;;;;;;;;;GAWG;AACH,wBAAgB,cAAc,CAC5B,WAAW,EAAE,MAAM,EACnB,YAAY,EAAE,MAAM,EACpB,YAAY,EAAE,MAAM,GACnB,MAAM,CAgCR;AAoBD;;;;;;GAMG;AACH,wBAAgB,iBAAiB,CAAC,SAAS,EAAE,WAAW,CAAC,MAAM,CAAC,GAAG,MAAM,CAQxE;AAID,OAAO,KAAK,EACV,cAAc,EACd,eAAe,EACf,UAAU,EACX,MAAM,mBAAmB,CAAC;AAE3B;;;;;;;GAOG;AACH,wBAAgB,iBAAiB,CAC/B,UAAU,EAAE,SAAS,cAAc,EAAE,EACrC,OAAO,EAAE,SAAS,eAAe,EAAE,GAClC,UAAU,CAgCZ;AAID,8DAA8D;AAC9D,eAAO,MAAM,mBAAmB,EAAE,SAAS,MAAM,EA4BhD,CAAC;AAEF,2CAA2C;AAC3C,eAAO,MAAM,iBAAiB,EAAE,WAAW,CAAC,MAAM,EAAE,SAAS,MAAM,EAAE,CAoDnE,CAAC"}

package/dist/domain/rag/services.js

@@ -136,6 +136,44 @@ export function detectProjectType(fileNames) {
     }
     return "Unknown";
 }
+/**
+ * Compute the delta between discovered files and previously indexed files.
+ * Pure domain logic — no I/O, no side effects.
+ *
+ * @param discovered - Files found on disk by file discovery
+ * @param indexed - File records from the persistent registry
+ * @returns Delta with toAdd, toUpdate, toRemove, and unchanged lists
+ */
+export function computeIndexDelta(discovered, indexed) {
+    const indexedMap = new Map();
+    for (const record of indexed) {
+        indexedMap.set(record.relativePath, record);
+    }
+    const discoveredPaths = new Set();
+    const toAdd = [];
+    const toUpdate = [];
+    const unchanged = [];
+    for (const file of discovered) {
+        discoveredPaths.add(file.relativePath);
+        const existing = indexedMap.get(file.relativePath);
+        if (existing === undefined) {
+            toAdd.push(file);
+        }
+        else if (file.mtimeMs > existing.mtimeMs) {
+            toUpdate.push(file);
+        }
+        else {
+            unchanged.push(file.relativePath);
+        }
+    }
+    const toRemove = [];
+    for (const record of indexed) {
+        if (!discoveredPaths.has(record.relativePath)) {
+            toRemove.push(record.relativePath);
+        }
+    }
+    return { toAdd, toUpdate, toRemove, unchanged };
+}
 // ── Ragignore Patterns ────────────────────────────────────────────────
 /** Universal patterns that should always be in .ragignore. */
 export const UNIVERSAL_RAGIGNORE = [

package/dist/domain/rag/services.js.map

@@ -1 +1 @@
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package/dist/hooks/first-run-guide.d.ts

@@ -0,0 +1,33 @@
+/**
+ * First-Run Guide Hook
+ *
+ * Injects quick-start instructions into the system prompt when the plugin
+ * detects a first-run scenario (AGENTS.md and config were just auto-created).
+ *
+ * Hook: "experimental.chat.system.transform"
+ * Signature: (input: { sessionID?, model }, output: { system: string[] }) => Promise<void>
+ *
+ * The injection happens only once per plugin load — after the first session
+ * receives the guidance, the flag is cleared.
+ *
+ * SOLID: SRP — first-run system prompt injection only
+ */
+export interface FirstRunGuideState {
+    /** True when auto-bootstrap created AGENTS.md on this plugin load. */
+    isFirstRun: boolean;
+    /** True when RAG index has 0 documents (needs indexing). */
+    ragEmpty: boolean;
+}
+/**
+ * Creates the system prompt injection hook for first-run guidance.
+ *
+ * @param state - Mutable state object; isFirstRun is set by the bootstrap
+ *   result in index.ts. The hook clears the flag after first injection.
+ */
+export declare function createFirstRunGuideHook(state: FirstRunGuideState): (input: {
+    sessionID?: string;
+    model: unknown;
+}, output: {
+    system: string[];
+}) => Promise<void>;
+//# sourceMappingURL=first-run-guide.d.ts.map

package/dist/hooks/first-run-guide.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"first-run-guide.d.ts","sourceRoot":"","sources":["../../src/hooks/first-run-guide.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AAGH,MAAM,WAAW,kBAAkB;IACjC,sEAAsE;IACtE,UAAU,EAAE,OAAO,CAAC;IACpB,4DAA4D;IAC5D,QAAQ,EAAE,OAAO,CAAC;CACnB;AA4BD;;;;;GAKG;AACH,wBAAgB,uBAAuB,CACrC,KAAK,EAAE,kBAAkB,GACxB,CACD,KAAK,EAAE;IAAE,SAAS,CAAC,EAAE,MAAM,CAAC;IAAC,KAAK,EAAE,OAAO,CAAA;CAAE,EAC7C,MAAM,EAAE;IAAE,MAAM,EAAE,MAAM,EAAE,CAAA;CAAE,KACzB,OAAO,CAAC,IAAI,CAAC,CAejB"}

package/dist/hooks/first-run-guide.js

@@ -0,0 +1,58 @@
+/**
+ * First-Run Guide Hook
+ *
+ * Injects quick-start instructions into the system prompt when the plugin
+ * detects a first-run scenario (AGENTS.md and config were just auto-created).
+ *
+ * Hook: "experimental.chat.system.transform"
+ * Signature: (input: { sessionID?, model }, output: { system: string[] }) => Promise<void>
+ *
+ * The injection happens only once per plugin load — after the first session
+ * receives the guidance, the flag is cleared.
+ *
+ * SOLID: SRP — first-run system prompt injection only
+ */
+// ── Types ─────────────────────────────────────────────────────────────────────
+// ── First-Run Guidance Content ────────────────────────────────────────────────
+const FIRST_RUN_GUIDANCE = `[JARVIS FIRST-RUN DETECTED]
+
+This project was just bootstrapped by JARVIS. The following steps are critical for a productive session:
+
+1. Run the /healthcheck command to verify all subsystems are operational
+2. If Ollama is available, index the codebase: use the rag-index tool
+3. Index the documentation for ORACLE search: use rag-oracle-index with directory="obsidian-vault"
+4. Review the kanban board state: use kanban-board-view
+5. Load the jarvis-onboarding skill for a complete orientation
+
+Tell the user: "JARVIS was just set up for this project. I'm running initial diagnostics to ensure everything is configured correctly."
+
+IMPORTANT: After completing these steps, the project will be fully operational. This message only appears on the first session after project bootstrap.`;
+const RAG_EMPTY_GUIDANCE = `[JARVIS RAG INDEX EMPTY]
+
+The RAG semantic search index has 0 documents. The agent should suggest running:
+- rag-index (to index the codebase — requires Ollama running)
+- rag-oracle-index directory="obsidian-vault" (to index documentation)
+
+Without RAG indexing, semantic code search will not return results.`;
+// ── Hook Factory ──────────────────────────────────────────────────────────────
+/**
+ * Creates the system prompt injection hook for first-run guidance.
+ *
+ * @param state - Mutable state object; isFirstRun is set by the bootstrap
+ *   result in index.ts. The hook clears the flag after first injection.
+ */
+export function createFirstRunGuideHook(state) {
+    let injected = false;
+    return async (_input, output) => {
+        // First-run guidance: inject once, then clear
+        if (state.isFirstRun && !injected) {
+            output.system.push(FIRST_RUN_GUIDANCE);
+            injected = true;
+        }
+        // RAG empty warning: inject every session until indexing happens
+        if (state.ragEmpty) {
+            output.system.push(RAG_EMPTY_GUIDANCE);
+        }
+    };
+}
+//# sourceMappingURL=first-run-guide.js.map

package/dist/hooks/first-run-guide.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"first-run-guide.js","sourceRoot":"","sources":["../../src/hooks/first-run-guide.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;;GAaG;AACH,iFAAiF;AASjF,iFAAiF;AAEjF,MAAM,kBAAkB,GAAG;;;;;;;;;;;;wJAY6H,CAAC;AAEzJ,MAAM,kBAAkB,GAAG;;;;;;oEAMyC,CAAC;AAErE,iFAAiF;AAEjF;;;;;GAKG;AACH,MAAM,UAAU,uBAAuB,CACrC,KAAyB;IAKzB,IAAI,QAAQ,GAAG,KAAK,CAAC;IAErB,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,EAAE,EAAE;QAC9B,8CAA8C;QAC9C,IAAI,KAAK,CAAC,UAAU,IAAI,CAAC,QAAQ,EAAE,CAAC;YAClC,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;YACvC,QAAQ,GAAG,IAAI,CAAC;QAClB,CAAC;QAED,iEAAiE;QACjE,IAAI,KAAK,CAAC,QAAQ,EAAE,CAAC;YACnB,MAAM,CAAC,MAAM,CAAC,IAAI,CAAC,kBAAkB,CAAC,CAAC;QACzC,CAAC;IACH,CAAC,CAAC;AACJ,CAAC"}

package/dist/index.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AACH,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,qBAAqB,CAAC;AAwGlD,eAAO,MAAM,YAAY,EAAE,MA+W1B,CAAC"}
+{"version":3,"file":"index.d.ts","sourceRoot":"","sources":["../src/index.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;;GAYG;AACH,OAAO,KAAK,EAAE,MAAM,EAAE,MAAM,qBAAqB,CAAC;AA6GlD,eAAO,MAAM,YAAY,EAAE,MAua1B,CAAC"}

package/dist/index.js

@@ -1,4 +1,4 @@
-import { mkdirSync } from "node:fs";
+import { existsSync, mkdirSync } from "node:fs";
 import { basename, join } from "node:path";
 import { WorkspaceId } from "./domain/shared/value-objects.js";
 import { SqliteAdapter } from "./infrastructure/database/sqlite-adapter.js";
@@ -28,6 +28,7 @@ import { VectraVectorRepository } from "./infrastructure/rag/vectra-adapter.js";
 import { OllamaEmbeddingProvider } from "./infrastructure/rag/ollama-embeddings.js";
 import { LangchainTextSplitter } from "./infrastructure/rag/text-splitter.js";
 import { FileSystemDiscovery } from "./infrastructure/rag/file-discovery.js";
+import { JsonFileIndexRegistry } from "./infrastructure/rag/file-index-registry.js";
 import { RagUseCases } from "./application/rag/use-cases.js";
 import { OracleUseCases } from "./application/rag/oracle-use-cases.js";
 import { LspClientAdapter } from "./infrastructure/domain-map/lsp-adapter.js";
@@ -81,11 +82,14 @@ import { SqliteSyncEventRepository } from "./infrastructure/azure-sync/sqlite-ev
 import { AzurePollService, SyncEventUseCases } from "./application/azure-sync/poll-service.js";
 import { createAzureSyncTools } from "./tools/azure-sync-tools.js";
 import { createAzureSyncEventTools } from "./tools/azure-sync-event-tools.js";
+import { createBootstrapTools } from "./tools/bootstrap-tools.js";
+import { BootstrapUseCases, HealthcheckUseCases, TerminalCommandsUseCases } from "./application/bootstrap/index.js";
 // Hooks
 import { createCompactingHook } from "./hooks/context-compacting.js";
 import { createShellEnvHook } from "./hooks/shell-env.js";
 import { createGuardrailsHook } from "./hooks/guardrails.js";
 import { createEventHook } from "./hooks/event-handlers.js";
+import { createFirstRunGuideHook } from "./hooks/first-run-guide.js";
 import { PluginLogger } from "./hooks/logger.js";
 /**
  * Derive workspace name from directory path.
@@ -213,12 +217,14 @@ export const JarvisPlugin = async (input) => {
     const vectorRepository = new VectraVectorRepository(ragPersistRoot, ragConfig.ollama.model);
     const textSplitter = new LangchainTextSplitter();
     const fileDiscovery = new FileSystemDiscovery();
+    const fileIndexRegistry = new JsonFileIndexRegistry(ragPersistRoot);
     const ragUseCases = new RagUseCases({
         embeddingProvider,
         vectorRepository,
         textSplitter,
         fileDiscovery,
         ragConfig,
+        fileIndexRegistry,
     });
     const oracleUseCases = new OracleUseCases({
         embeddingProvider,
@@ -319,6 +325,40 @@ export const JarvisPlugin = async (input) => {
         pollService.start();
     }
     const azureSyncEventTools = createAzureSyncEventTools({ syncEventUseCases, pollService });
+    // Bootstrap Tools (project initialization + healthcheck)
+    const bootstrapUseCases = new BootstrapUseCases();
+    const healthcheckUseCases = new HealthcheckUseCases({
+        ollamaUrl: ragConfig.ollama.url,
+        ollamaModel: ragConfig.ollama.model,
+        dbPath,
+        configPath: join(input.directory, "config", "jarvis.yaml"),
+        workspace: getWorkspace(input.directory),
+        getRagStatus: async (ws) => {
+            try {
+                const s = await ragUseCases.status({ workspace: ws });
+                if (s.success)
+                    return { documentCount: s.data.documentCount };
+                return null;
+            }
+            catch {
+                return null;
+            }
+        },
+    });
+    const isNpmInstall = input.directory !== join(import.meta.dirname ?? "", "..");
+    const hasVault = existsSync(join(input.directory, "obsidian-vault"));
+    const terminalCommandsUseCases = new TerminalCommandsUseCases({
+        directory: input.directory,
+        hasVault,
+        isNpmInstall,
+    });
+    const bootstrapTools = createBootstrapTools({
+        bootstrapUseCases,
+        healthcheckUseCases,
+        terminalCommandsUseCases,
+        configService,
+        directory: input.directory,
+    });
     // ── Auto-Registration ─────────────────────────────────────────────
     // Register current workspace in the central registry on plugin boot.
     // Fire-and-forget — does not block plugin startup.
@@ -330,6 +370,24 @@ export const JarvisPlugin = async (input) => {
     agentRegistryUseCases.bootstrapBuiltInProfiles(BUILT_IN_PROFILES).catch((err) => {
         log.exception("Agent profile bootstrap failed", err);
     });
+    // Auto-bootstrap AGENTS.md + project structure if missing (fire-and-forget, non-blocking).
+    const firstRunState = { isFirstRun: false, ragEmpty: false };
+    try {
+        const bsRes = bootstrapUseCases.bootstrap(input.directory, bootstrapUseCases.buildConfig(azureSyncConfig), false);
+        if (bsRes.agentsMdCreated) {
+            log.info("AGENTS.md auto-generated", { path: bsRes.agentsMdPath });
+            firstRunState.isFirstRun = true;
+        }
+    }
+    catch (err) {
+        log.exception("Auto-bootstrap failed", err);
+    }
+    // Detect empty RAG index (async, non-blocking — updates state for hook).
+    ragUseCases.status({ workspace: wsName }).then((s) => {
+        if (s.success && s.data.documentCount === 0) {
+            firstRunState.ragEmpty = true;
+        }
+    }).catch(() => { });
     // ── Hooks ─────────────────────────────────────────────────────────
     const compactingHook = createCompactingHook({
         sessionUseCases,
@@ -351,6 +409,7 @@ export const JarvisPlugin = async (input) => {
         workspace: getWorkspace(input.directory),
         log: log.child("events"),
     });
+    const firstRunGuideHook = createFirstRunGuideHook(firstRunState);
     // ── Compose Hooks Object ──────────────────────────────────────────
     const allTools = {
         ...contextMemoryTools,
@@ -372,6 +431,7 @@ export const JarvisPlugin = async (input) => {
         ...pipelineTools,
         ...azureSyncTools,
         ...azureSyncEventTools,
+        ...bootstrapTools,
     };
     log.info("Plugin initialized", {
         workspace: wsName,
@@ -381,6 +441,7 @@ export const JarvisPlugin = async (input) => {
     return {
         tool: allTools,
         "experimental.session.compacting": compactingHook,
+        "experimental.chat.system.transform": firstRunGuideHook,
         "shell.env": shellEnvHook,
         "tool.execute.before": guardrailsHook,
         event: eventHook,

package/dist/index.js.map

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package/dist/infrastructure/rag/file-discovery.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"file-discovery.d.ts","sourceRoot":"","sources":["../../../src/infrastructure/rag/file-discovery.ts"],"names":[],"mappings":"AAaA,OAAO,KAAK,EACV,iBAAiB,EAEjB,eAAe,EAChB,MAAM,kCAAkC,CAAC;AA8D1C;;;;;;;;GAQG;AACH,qBAAa,mBAAoB,YAAW,iBAAiB;IAC3D,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,aAAa,CAAa;IAE5C,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,eAAe,CAAC;IA6CrD,QAAQ,CAAC,YAAY,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC;IAQtD,eAAe,CAAC,SAAS,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;YA6B9D,kBAAkB;YAYlB,aAAa;CAsE5B"}
+{"version":3,"file":"file-discovery.d.ts","sourceRoot":"","sources":["../../../src/infrastructure/rag/file-discovery.ts"],"names":[],"mappings":"AAaA,OAAO,KAAK,EACV,iBAAiB,EAEjB,eAAe,EAChB,MAAM,kCAAkC,CAAC;AA8D1C;;;;;;;;GAQG;AACH,qBAAa,mBAAoB,YAAW,iBAAiB;IAC3D,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,aAAa,CAAa;IAE5C,QAAQ,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,eAAe,CAAC;IA6CrD,QAAQ,CAAC,YAAY,EAAE,MAAM,GAAG,OAAO,CAAC,MAAM,GAAG,IAAI,CAAC;IAQtD,eAAe,CAAC,SAAS,EAAE,MAAM,EAAE,WAAW,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;YA6B9D,kBAAkB;YAYlB,aAAa;CAuE5B"}

package/dist/infrastructure/rag/file-discovery.js

@@ -187,6 +187,7 @@ export class FileSystemDiscovery {
                             relativePath: relPath,
                             extension: ext,
                             sizeBytes: fileStat.size,
+                            mtimeMs: fileStat.mtimeMs,
                         },
                     });
                 }

package/dist/infrastructure/rag/file-discovery.js.map

@@ -1 +1 @@
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package/dist/infrastructure/rag/file-index-registry.d.ts

@@ -0,0 +1,18 @@
+import type { FileIndexRegistryPort, FileIndexRecord } from "../../domain/rag/repositories.js";
+/**
+ * JSON file-backed implementation of the file index registry.
+ * Stores one manifest file per workspace at `{persistRoot}/{workspace}/index-manifest.json`.
+ */
+export declare class JsonFileIndexRegistry implements FileIndexRegistryPort {
+    private readonly persistRoot;
+    private static readonly MANIFEST_NAME;
+    constructor(persistRoot: string);
+    /** Load all records for a workspace. Returns empty array if no manifest. */
+    loadRecords(workspace: string): Promise<readonly FileIndexRecord[]>;
+    /** Save all records for a workspace (replaces previous manifest). */
+    saveRecords(workspace: string, records: readonly FileIndexRecord[]): Promise<void>;
+    /** Clear all records for a workspace (delete manifest file). */
+    clearRecords(workspace: string): Promise<void>;
+    private manifestPath;
+}
+//# sourceMappingURL=file-index-registry.d.ts.map

package/dist/infrastructure/rag/file-index-registry.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"file-index-registry.d.ts","sourceRoot":"","sources":["../../../src/infrastructure/rag/file-index-registry.ts"],"names":[],"mappings":"AAeA,OAAO,KAAK,EACV,qBAAqB,EACrB,eAAe,EAChB,MAAM,kCAAkC,CAAC;AAS1C;;;GAGG;AACH,qBAAa,qBAAsB,YAAW,qBAAqB;IAGrD,OAAO,CAAC,QAAQ,CAAC,WAAW;IAFxC,OAAO,CAAC,MAAM,CAAC,QAAQ,CAAC,aAAa,CAAyB;gBAEjC,WAAW,EAAE,MAAM;IAEhD,4EAA4E;IACtE,WAAW,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,SAAS,eAAe,EAAE,CAAC;IAczE,qEAAqE;IAC/D,WAAW,CAAC,SAAS,EAAE,MAAM,EAAE,OAAO,EAAE,SAAS,eAAe,EAAE,GAAG,OAAO,CAAC,IAAI,CAAC;IAYxF,gEAAgE;IAC1D,YAAY,CAAC,SAAS,EAAE,MAAM,GAAG,OAAO,CAAC,IAAI,CAAC;IASpD,OAAO,CAAC,YAAY;CAGrB"}