@mat3ra/esse 2024.4.8-0 → 2024.4.8-2

package/dist/py/software_directory/ml/unit/processing/data_transformation/__init__.py

@@ -1,199 +0,0 @@
-# generated by datamodel-codegen:
-#   filename:  software_directory/ml/unit/processing/data_transformation.json
-#   version:   0.25.5
-
-from __future__ import annotations
-
-from enum import Enum
-from typing import Any, Dict, List, Optional, Union
-
-from pydantic import BaseModel, ConfigDict, Field, RootModel
-
-
-class Operation(Enum):
-    data_transformation = "data_transformation"
-
-
-class OperationType(Enum):
-    scale_and_reduce = "scale_and_reduce"
-
-
-class Scaler(Enum):
-    standard_scaler = "standard_scaler"
-
-
-class PerFeatureItem(BaseModel):
-    variance: Optional[float] = None
-    """
-    variance in original training data
-    """
-    mean: Optional[float] = None
-    """
-    mean value of the original training data
-    """
-    scale: float
-    """
-    scale multiplier for this feature/property
-    """
-    name: str
-    """
-    feature/property name in 'flattened' format
-    """
-
-
-class InputData(BaseModel):
-    scaler: Scaler
-    """
-    type of scaler to be applied
-    """
-    perFeature: Optional[List[PerFeatureItem]] = None
-    """
-    per-feature scaling data
-    """
-
-
-class Type(Enum):
-    processing = "processing"
-
-
-class Status(Enum):
-    idle = "idle"
-    active = "active"
-    warning = "warning"
-    error = "error"
-    finished = "finished"
-
-
-class Name(Enum):
-    default = "default"
-    atomsTooClose = "atomsTooClose"
-    atomsOverlap = "atomsOverlap"
-
-
-class Severity(Enum):
-    info = "info"
-    warning = "warning"
-    error = "error"
-
-
-class ConsistencyCheck(BaseModel):
-    key: str
-    """
-    Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
-    """
-    name: Name
-    """
-    Name of the consistency check that is performed, which is listed in an enum.
-    """
-    severity: Severity
-    """
-    Severity level of the problem, which is used in UI to differentiate.
-    """
-    message: str
-    """
-    Message generated by the consistency check describing the problem.
-    """
-
-
-class NameResultSchema(BaseModel):
-    name: str
-    """
-    The name of this item. e.g. scf_accuracy
-    """
-
-
-class StatusTrackItem(BaseModel):
-    trackedAt: float
-    status: str
-    repetition: Optional[float] = None
-
-
-class ScaleAndReduceUnitSchema(BaseModel):
-    model_config = ConfigDict(
-        extra="allow",
-    )
-    operation: Operation
-    """
-    Contains information about the operation used.
-    """
-    operationType: OperationType
-    """
-    Contains information about the specific type of the operation used.
-    """
-    inputData: InputData
-    """
-    unit input (type to be specified by the child units)
-    """
-    type: Type
-    """
-    type of the unit
-    """
-    field_id: Optional[str] = Field(None, alias="_id")
-    """
-    entity identity
-    """
-    isDraft: Optional[bool] = None
-    name: Optional[str] = None
-    """
-    name of the unit. e.g. pw_scf
-    """
-    status: Optional[Status] = None
-    """
-    Status of the unit.
-    """
-    head: Optional[bool] = None
-    """
-    Whether this unit is the first one to be executed.
-    """
-    flowchartId: str
-    """
-    Identity of the unit in the workflow. Used to trace the execution flow of the workflow.
-    """
-    next: Optional[str] = None
-    """
-    Next unit's flowchartId. If empty, the current unit is the last.
-    """
-    enableRender: Optional[bool] = None
-    """
-    Whether Rupy should attempt to use Jinja templating to add context variables into the unit
-    """
-    context: Optional[Dict[str, Any]] = None
-    slug: Optional[str] = None
-    """
-    entity slug
-    """
-    systemName: Optional[str] = None
-    consistencyChecks: Optional[List[ConsistencyCheck]] = None
-    schemaVersion: Optional[str] = "2022.8.16"
-    """
-    entity's schema version. Used to distinct between different schemas.
-    """
-    isDefault: Optional[bool] = False
-    """
-    Identifies that entity is defaultable
-    """
-    preProcessors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the pre-processors for this calculation
-    """
-    postProcessors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the post-processors for this calculation
-    """
-    monitors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the monitors for this calculation
-    """
-    results: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the results for this calculation
-    """
-    tags: Optional[List[str]] = None
-    """
-    entity tags
-    """
-    statusTrack: Optional[List[StatusTrackItem]] = None
-
-
-class ESSE(RootModel[ScaleAndReduceUnitSchema]):
-    root: ScaleAndReduceUnitSchema

package/dist/py/software_directory/ml/unit/processing/data_transformation/manipulation.py

@@ -1,176 +0,0 @@
-# generated by datamodel-codegen:
-#   filename:  software_directory/ml/unit/processing/data_transformation/manipulation.json
-#   version:   0.25.5
-
-from __future__ import annotations
-
-from enum import Enum
-from typing import Any, Dict, List, Optional, Union
-
-from pydantic import BaseModel, ConfigDict, Field
-
-
-class Operation(Enum):
-    data_transformation = "data_transformation"
-
-
-class OperationType(Enum):
-    manipulation = "manipulation"
-
-
-class InputData(BaseModel):
-    cleanMissingData: bool
-    """
-    whether to clean missing data, eg. NaN
-    """
-    removeDuplicateRows: bool
-    """
-    whether to remove duplicate rows
-    """
-    replaceNoneValuesWith: float
-    """
-    replace None values with a given value
-    """
-
-
-class Type(Enum):
-    processing = "processing"
-
-
-class Status(Enum):
-    idle = "idle"
-    active = "active"
-    warning = "warning"
-    error = "error"
-    finished = "finished"
-
-
-class Name(Enum):
-    default = "default"
-    atomsTooClose = "atomsTooClose"
-    atomsOverlap = "atomsOverlap"
-
-
-class Severity(Enum):
-    info = "info"
-    warning = "warning"
-    error = "error"
-
-
-class ConsistencyCheck(BaseModel):
-    key: str
-    """
-    Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
-    """
-    name: Name
-    """
-    Name of the consistency check that is performed, which is listed in an enum.
-    """
-    severity: Severity
-    """
-    Severity level of the problem, which is used in UI to differentiate.
-    """
-    message: str
-    """
-    Message generated by the consistency check describing the problem.
-    """
-
-
-class NameResultSchema(BaseModel):
-    name: str
-    """
-    The name of this item. e.g. scf_accuracy
-    """
-
-
-class StatusTrackItem(BaseModel):
-    trackedAt: float
-    status: str
-    repetition: Optional[float] = None
-
-
-class ManipulationUnitSchema(BaseModel):
-    model_config = ConfigDict(
-        extra="allow",
-    )
-    operation: Operation
-    """
-    Contains information about the operation used.
-    """
-    operationType: OperationType
-    """
-    Contains information about the specific type of the operation used.
-    """
-    inputData: InputData
-    """
-    unit input (type to be specified by the child units)
-    """
-    type: Type
-    """
-    type of the unit
-    """
-    field_id: Optional[str] = Field(None, alias="_id")
-    """
-    entity identity
-    """
-    isDraft: Optional[bool] = None
-    name: Optional[str] = None
-    """
-    name of the unit. e.g. pw_scf
-    """
-    status: Optional[Status] = None
-    """
-    Status of the unit.
-    """
-    head: Optional[bool] = None
-    """
-    Whether this unit is the first one to be executed.
-    """
-    flowchartId: str
-    """
-    Identity of the unit in the workflow. Used to trace the execution flow of the workflow.
-    """
-    next: Optional[str] = None
-    """
-    Next unit's flowchartId. If empty, the current unit is the last.
-    """
-    enableRender: Optional[bool] = None
-    """
-    Whether Rupy should attempt to use Jinja templating to add context variables into the unit
-    """
-    context: Optional[Dict[str, Any]] = None
-    slug: Optional[str] = None
-    """
-    entity slug
-    """
-    systemName: Optional[str] = None
-    consistencyChecks: Optional[List[ConsistencyCheck]] = None
-    schemaVersion: Optional[str] = "2022.8.16"
-    """
-    entity's schema version. Used to distinct between different schemas.
-    """
-    isDefault: Optional[bool] = False
-    """
-    Identifies that entity is defaultable
-    """
-    preProcessors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the pre-processors for this calculation
-    """
-    postProcessors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the post-processors for this calculation
-    """
-    monitors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the monitors for this calculation
-    """
-    results: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the results for this calculation
-    """
-    tags: Optional[List[str]] = None
-    """
-    entity tags
-    """
-    statusTrack: Optional[List[StatusTrackItem]] = None

package/dist/py/software_directory/ml/unit/processing/data_transformation/scale_and_reduce.py

@@ -1,195 +0,0 @@
-# generated by datamodel-codegen:
-#   filename:  software_directory/ml/unit/processing/data_transformation/scale_and_reduce.json
-#   version:   0.25.5
-
-from __future__ import annotations
-
-from enum import Enum
-from typing import Any, Dict, List, Optional, Union
-
-from pydantic import BaseModel, ConfigDict, Field
-
-
-class Operation(Enum):
-    data_transformation = "data_transformation"
-
-
-class OperationType(Enum):
-    scale_and_reduce = "scale_and_reduce"
-
-
-class Scaler(Enum):
-    standard_scaler = "standard_scaler"
-
-
-class PerFeatureItem(BaseModel):
-    variance: Optional[float] = None
-    """
-    variance in original training data
-    """
-    mean: Optional[float] = None
-    """
-    mean value of the original training data
-    """
-    scale: float
-    """
-    scale multiplier for this feature/property
-    """
-    name: str
-    """
-    feature/property name in 'flattened' format
-    """
-
-
-class InputData(BaseModel):
-    scaler: Scaler
-    """
-    type of scaler to be applied
-    """
-    perFeature: Optional[List[PerFeatureItem]] = None
-    """
-    per-feature scaling data
-    """
-
-
-class Type(Enum):
-    processing = "processing"
-
-
-class Status(Enum):
-    idle = "idle"
-    active = "active"
-    warning = "warning"
-    error = "error"
-    finished = "finished"
-
-
-class Name(Enum):
-    default = "default"
-    atomsTooClose = "atomsTooClose"
-    atomsOverlap = "atomsOverlap"
-
-
-class Severity(Enum):
-    info = "info"
-    warning = "warning"
-    error = "error"
-
-
-class ConsistencyCheck(BaseModel):
-    key: str
-    """
-    Key of the property of the entity on which the consistency check is performed in Mongo dot notation, e.g. 'basis.coordinates.1'
-    """
-    name: Name
-    """
-    Name of the consistency check that is performed, which is listed in an enum.
-    """
-    severity: Severity
-    """
-    Severity level of the problem, which is used in UI to differentiate.
-    """
-    message: str
-    """
-    Message generated by the consistency check describing the problem.
-    """
-
-
-class NameResultSchema(BaseModel):
-    name: str
-    """
-    The name of this item. e.g. scf_accuracy
-    """
-
-
-class StatusTrackItem(BaseModel):
-    trackedAt: float
-    status: str
-    repetition: Optional[float] = None
-
-
-class ScaleAndReduceUnitSchema(BaseModel):
-    model_config = ConfigDict(
-        extra="allow",
-    )
-    operation: Operation
-    """
-    Contains information about the operation used.
-    """
-    operationType: OperationType
-    """
-    Contains information about the specific type of the operation used.
-    """
-    inputData: InputData
-    """
-    unit input (type to be specified by the child units)
-    """
-    type: Type
-    """
-    type of the unit
-    """
-    field_id: Optional[str] = Field(None, alias="_id")
-    """
-    entity identity
-    """
-    isDraft: Optional[bool] = None
-    name: Optional[str] = None
-    """
-    name of the unit. e.g. pw_scf
-    """
-    status: Optional[Status] = None
-    """
-    Status of the unit.
-    """
-    head: Optional[bool] = None
-    """
-    Whether this unit is the first one to be executed.
-    """
-    flowchartId: str
-    """
-    Identity of the unit in the workflow. Used to trace the execution flow of the workflow.
-    """
-    next: Optional[str] = None
-    """
-    Next unit's flowchartId. If empty, the current unit is the last.
-    """
-    enableRender: Optional[bool] = None
-    """
-    Whether Rupy should attempt to use Jinja templating to add context variables into the unit
-    """
-    context: Optional[Dict[str, Any]] = None
-    slug: Optional[str] = None
-    """
-    entity slug
-    """
-    systemName: Optional[str] = None
-    consistencyChecks: Optional[List[ConsistencyCheck]] = None
-    schemaVersion: Optional[str] = "2022.8.16"
-    """
-    entity's schema version. Used to distinct between different schemas.
-    """
-    isDefault: Optional[bool] = False
-    """
-    Identifies that entity is defaultable
-    """
-    preProcessors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the pre-processors for this calculation
-    """
-    postProcessors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the post-processors for this calculation
-    """
-    monitors: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the monitors for this calculation
-    """
-    results: Optional[List[Union[NameResultSchema, str]]] = None
-    """
-    names of the results for this calculation
-    """
-    tags: Optional[List[str]] = None
-    """
-    entity tags
-    """
-    statusTrack: Optional[List[StatusTrackItem]] = None