@manuscripts/transform 2.3.34-LEAN-3911.2 → 2.3.35

package/dist/cjs/lib/utils.js

@@ -15,7 +15,7 @@
  * limitations under the License.
  */
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.setElementAttributes = exports.getTrimmedTextContent = exports.findParentNodeClosestToPos = exports.isInBibliographySection = exports.isInGraphicalAbstractSection = exports.findNodePositions = exports.iterateChildren = void 0;
+exports.getTrimmedTextContent = exports.findParentNodeClosestToPos = exports.isInBibliographySection = exports.isInGraphicalAbstractSection = exports.findNodePositions = exports.iterateChildren = void 0;
 const bibliography_section_1 = require("../schema/nodes/bibliography_section");
 const graphical_abstract_section_1 = require("../schema/nodes/graphical_abstract_section");
 function* iterateChildren(node, recurse = false) {
@@ -83,11 +83,3 @@ const getTrimmedTextContent = (node, querySelector) => {
     return (_b = (_a = node.querySelector(querySelector)) === null || _a === void 0 ? void 0 : _a.textContent) === null || _b === void 0 ? void 0 : _b.trim();
 };
 exports.getTrimmedTextContent = getTrimmedTextContent;
-const setElementAttributes = (element, attributes) => {
-    Object.entries(attributes).forEach(([key, value]) => {
-        if (value) {
-            element.setAttribute(key, value);
-        }
-    });
-};
-exports.setElementAttributes = setElementAttributes;

package/dist/cjs/schema/nodes/inline_footnote.js

@@ -17,6 +17,7 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isInlineFootnoteNode = exports.inlineFootnote = void 0;
 exports.inlineFootnote = {
+    name: 'Footnote marker',
     attrs: {
         rids: { default: [] },
         contents: { default: '' },

package/dist/cjs/transformer/__tests__/__helpers__/doc.js

@@ -0,0 +1,37 @@
+"use strict";
+/*!
+ * © 2019 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.createTestDoc = exports.createTestModelMap = void 0;
+const project_dump_json_1 = __importDefault(require("../../../__tests__/data/project-dump.json"));
+const decode_1 = require("../../decode");
+const createTestModelMap = () => {
+    const modelMap = new Map();
+    for (const component of project_dump_json_1.default.data) {
+        modelMap.set(component._id, component);
+    }
+    return modelMap;
+};
+exports.createTestModelMap = createTestModelMap;
+const createTestDoc = () => {
+    const modelMap = (0, exports.createTestModelMap)();
+    const decoder = new decode_1.Decoder(modelMap);
+    return decoder.createArticleNode();
+};
+exports.createTestDoc = createTestDoc;

package/dist/cjs/transformer/builders.js

@@ -0,0 +1,219 @@
+"use strict";
+/*!
+ * © 2019 Atypon Systems LLC
+ *
+ * Licensed under the Apache License, Version 2.0 (the "License");
+ * you may not use this file except in compliance with the License.
+ * You may obtain a copy of the License at
+ *
+ *    http://www.apache.org/licenses/LICENSE-2.0
+ *
+ * Unless required by applicable law or agreed to in writing, software
+ * distributed under the License is distributed on an "AS IS" BASIS,
+ * WITHOUT WARRANTIES OR CONDITIONS OF ANY KIND, either express or implied.
+ * See the License for the specific language governing permissions and
+ * limitations under the License.
+ */
+var __importDefault = (this && this.__importDefault) || function (mod) {
+    return (mod && mod.__esModule) ? mod : { "default": mod };
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.buildTitles = exports.buildElementsOrder = exports.auxiliaryObjectTypes = exports.buildJournal = exports.buildAttribution = exports.buildContributorRole = exports.buildContribution = exports.buildColor = exports.buildParagraph = exports.buildSection = exports.buildCorresp = exports.buildFootnotesOrder = exports.buildAuthorNotes = exports.buildFootnote = exports.buildNote = exports.buildComment = exports.buildSupplementaryMaterial = exports.buildAffiliation = exports.buildFigure = exports.buildKeywordGroup = exports.buildKeyword = exports.buildBibliographyElement = exports.buildBibliographicDate = exports.buildBibliographicName = exports.buildBibliographyItem = exports.buildContributor = exports.buildManuscript = exports.buildProject = void 0;
+const json_schema_1 = require("@manuscripts/json-schema");
+const w3c_xmlserializer_1 = __importDefault(require("w3c-xmlserializer"));
+const schema_1 = require("../schema");
+const id_1 = require("./id");
+const timestamp_1 = require("./timestamp");
+const buildProject = (owner) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Project),
+    objectType: json_schema_1.ObjectTypes.Project,
+    owners: [owner],
+    writers: [],
+    viewers: [],
+    title: '',
+});
+exports.buildProject = buildProject;
+const buildManuscript = () => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Manuscript),
+    objectType: json_schema_1.ObjectTypes.Manuscript,
+});
+exports.buildManuscript = buildManuscript;
+const buildContributor = (bibliographicName, role = 'author', priority = 0, userID, invitationID) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Contributor),
+    objectType: json_schema_1.ObjectTypes.Contributor,
+    priority,
+    role,
+    affiliations: [],
+    bibliographicName: (0, exports.buildBibliographicName)(bibliographicName),
+    userID,
+    invitationID,
+});
+exports.buildContributor = buildContributor;
+const buildBibliographyItem = (data) => (Object.assign(Object.assign({}, data), { type: data.type || 'article-journal', _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.BibliographyItem), objectType: json_schema_1.ObjectTypes.BibliographyItem }));
+exports.buildBibliographyItem = buildBibliographyItem;
+const buildBibliographicName = (data) => (Object.assign(Object.assign({}, data), { _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.BibliographicName), objectType: json_schema_1.ObjectTypes.BibliographicName }));
+exports.buildBibliographicName = buildBibliographicName;
+const buildBibliographicDate = (data) => (Object.assign(Object.assign({}, data), { _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.BibliographicDate), objectType: json_schema_1.ObjectTypes.BibliographicDate }));
+exports.buildBibliographicDate = buildBibliographicDate;
+const buildBibliographyElement = (bibliographyItems) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.BibliographyElement),
+    objectType: json_schema_1.ObjectTypes.BibliographyElement,
+    contents: '',
+    elementType: 'div',
+    containedObjectIDs: bibliographyItems.map((b) => b._id),
+});
+exports.buildBibliographyElement = buildBibliographyElement;
+const buildKeyword = (name) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Keyword),
+    objectType: json_schema_1.ObjectTypes.Keyword,
+    name,
+});
+exports.buildKeyword = buildKeyword;
+const buildKeywordGroup = (attributes) => (Object.assign(Object.assign(Object.assign({ _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.KeywordGroup), objectType: json_schema_1.ObjectTypes.KeywordGroup }, (attributes.type && { type: attributes.type })), (attributes.title && { title: attributes.title })), (attributes.label && { label: attributes.label })));
+exports.buildKeywordGroup = buildKeywordGroup;
+const buildFigure = (blob) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Figure),
+    objectType: json_schema_1.ObjectTypes.Figure,
+    contentType: blob.type,
+    src: window.URL.createObjectURL(blob),
+    attachment: {
+        id: 'image',
+        type: blob.type,
+        data: blob,
+    },
+});
+exports.buildFigure = buildFigure;
+const buildAffiliation = (institution, priority = 0) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Affiliation),
+    objectType: json_schema_1.ObjectTypes.Affiliation,
+    institution,
+    priority,
+});
+exports.buildAffiliation = buildAffiliation;
+const buildSupplementaryMaterial = (title, href) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Supplement),
+    objectType: json_schema_1.ObjectTypes.Supplement,
+    title,
+    href,
+});
+exports.buildSupplementaryMaterial = buildSupplementaryMaterial;
+const buildComment = (target, contents = '', selector, contributions, annotationColor) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.CommentAnnotation),
+    objectType: json_schema_1.ObjectTypes.CommentAnnotation,
+    target,
+    selector,
+    contents,
+    contributions,
+    annotationColor,
+});
+exports.buildComment = buildComment;
+const buildNote = (target, source, contents = '') => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.ManuscriptNote),
+    objectType: json_schema_1.ObjectTypes.ManuscriptNote,
+    target,
+    source,
+    contents,
+});
+exports.buildNote = buildNote;
+const buildFootnote = (containingObject, contents, kind = 'footnote') => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Footnote),
+    objectType: json_schema_1.ObjectTypes.Footnote,
+    containingObject: containingObject || undefined,
+    contents,
+    kind,
+});
+exports.buildFootnote = buildFootnote;
+const buildAuthorNotes = (containedObjectIDs) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.AuthorNotes),
+    objectType: json_schema_1.ObjectTypes.AuthorNotes,
+    containedObjectIDs: containedObjectIDs,
+});
+exports.buildAuthorNotes = buildAuthorNotes;
+const buildFootnotesOrder = (footnotesList, containedObjectID) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.FootnotesOrder),
+    objectType: json_schema_1.ObjectTypes.FootnotesOrder,
+    footnotesList,
+    containedObjectID,
+});
+exports.buildFootnotesOrder = buildFootnotesOrder;
+const buildCorresp = (contents) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Corresponding),
+    objectType: json_schema_1.ObjectTypes.Corresponding,
+    contents,
+});
+exports.buildCorresp = buildCorresp;
+const buildSection = (priority = 0, path = []) => {
+    const id = (0, id_1.generateID)(json_schema_1.ObjectTypes.Section);
+    return {
+        _id: id,
+        objectType: json_schema_1.ObjectTypes.Section,
+        priority,
+        path: path.concat(id),
+    };
+};
+exports.buildSection = buildSection;
+const buildParagraph = (innerHTML = '') => {
+    const _id = (0, id_1.generateID)(json_schema_1.ObjectTypes.ParagraphElement);
+    const element = document.createElementNS(null, 'p');
+    element.setAttribute('id', _id);
+    if (innerHTML) {
+        element.innerHTML = innerHTML;
+    }
+    const contents = (0, w3c_xmlserializer_1.default)(element);
+    return {
+        _id,
+        objectType: json_schema_1.ObjectTypes.ParagraphElement,
+        elementType: 'p',
+        contents,
+    };
+};
+exports.buildParagraph = buildParagraph;
+const buildColor = (value, priority) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Color),
+    objectType: json_schema_1.ObjectTypes.Color,
+    priority,
+    value,
+});
+exports.buildColor = buildColor;
+const buildContribution = (profileID) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Contribution),
+    objectType: json_schema_1.ObjectTypes.Contribution,
+    profileID,
+    timestamp: (0, timestamp_1.timestamp)(),
+});
+exports.buildContribution = buildContribution;
+const buildContributorRole = (name) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.ContributorRole),
+    objectType: json_schema_1.ObjectTypes.ContributorRole,
+    name,
+});
+exports.buildContributorRole = buildContributorRole;
+const buildAttribution = () => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Attribution),
+    objectType: json_schema_1.ObjectTypes.Attribution,
+});
+exports.buildAttribution = buildAttribution;
+const buildJournal = () => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Journal),
+    objectType: json_schema_1.ObjectTypes.Journal,
+});
+exports.buildJournal = buildJournal;
+exports.auxiliaryObjectTypes = new Set([
+    schema_1.schema.nodes.figure_element,
+    schema_1.schema.nodes.table_element,
+    schema_1.schema.nodes.equation_element,
+    schema_1.schema.nodes.listing_element,
+]);
+const buildElementsOrder = (elementType) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.ElementsOrder),
+    objectType: json_schema_1.ObjectTypes.ElementsOrder,
+    elementType: elementType,
+    elements: [],
+});
+exports.buildElementsOrder = buildElementsOrder;
+const buildTitles = (title) => ({
+    _id: (0, id_1.generateID)(json_schema_1.ObjectTypes.Titles),
+    objectType: json_schema_1.ObjectTypes.Titles,
+    title: title || '',
+});
+exports.buildTitles = buildTitles;