@manuscripts/transform 1.0.0 → 1.0.1-LEAN-2105

package/dist/cjs/jats/importer/jats-parser-utils.js

@@ -16,9 +16,9 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.htmlFromJatsNode = exports.fixBodyPMNode = exports.flatten = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 const transformer_1 = require("../../transformer");
-const isAuxiliaryObjectReference = (0, transformer_1.hasObjectType)(manuscripts_json_schema_1.ObjectTypes.AuxiliaryObjectReference);
+const isAuxiliaryObjectReference = (0, transformer_1.hasObjectType)(json_schema_1.ObjectTypes.AuxiliaryObjectReference);
 function flatten(arrays) {
     return [].concat(...arrays);
 }

package/dist/cjs/jats/jats-exporter.js

@@ -19,7 +19,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.JATSExporter = exports.createCounter = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 const debug_1 = __importDefault(require("debug"));
 const prosemirror_model_1 = require("prosemirror-model");
 const w3c_xmlserializer_1 = __importDefault(require("w3c-xmlserializer"));
@@ -45,7 +45,7 @@ const findChildNodeOfType = (node, nodeType) => {
         }
     }
 };
-const isContributor = (0, object_types_1.hasObjectType)(manuscripts_json_schema_1.ObjectTypes.Contributor);
+const isContributor = (0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.Contributor);
 const CREDIT_VOCAB_IDENTIFIER = 'https://dictionary.casrai.org/Contributor_Roles';
 const chooseRoleVocabAttributes = (role) => {
     if (role.uri && role.uri.startsWith(CREDIT_VOCAB_IDENTIFIER)) {
@@ -99,18 +99,18 @@ const createDefaultIdGenerator = () => {
 };
 const chooseRefType = (objectType) => {
     switch (objectType) {
-        case manuscripts_json_schema_1.ObjectTypes.Figure:
-        case manuscripts_json_schema_1.ObjectTypes.FigureElement:
+        case json_schema_1.ObjectTypes.Figure:
+        case json_schema_1.ObjectTypes.FigureElement:
             return 'fig';
-        case manuscripts_json_schema_1.ObjectTypes.Footnote:
+        case json_schema_1.ObjectTypes.Footnote:
             return 'fn';
-        case manuscripts_json_schema_1.ObjectTypes.Table:
-        case manuscripts_json_schema_1.ObjectTypes.TableElement:
+        case json_schema_1.ObjectTypes.Table:
+        case json_schema_1.ObjectTypes.TableElement:
             return 'table';
-        case manuscripts_json_schema_1.ObjectTypes.Section:
+        case json_schema_1.ObjectTypes.Section:
             return 'sec';
-        case manuscripts_json_schema_1.ObjectTypes.Equation:
-        case manuscripts_json_schema_1.ObjectTypes.EquationElement:
+        case json_schema_1.ObjectTypes.Equation:
+        case json_schema_1.ObjectTypes.EquationElement:
             return 'disp-formula';
     }
 };
@@ -240,7 +240,7 @@ class JATSExporter {
             front.appendChild(journalMeta);
             const articleMeta = this.document.createElement('article-meta');
             front.appendChild(articleMeta);
-            const journal = [...this.modelMap.values()].find((model) => model.objectType === manuscripts_json_schema_1.ObjectTypes.Journal);
+            const journal = [...this.modelMap.values()].find((model) => model.objectType === json_schema_1.ObjectTypes.Journal);
             if (journal) {
                 if (journal.journalIdentifiers) {
                     for (const item of journal.journalIdentifiers) {
@@ -351,7 +351,7 @@ class JATSExporter {
                 this.setTitleContent(element, manuscript.runningTitle);
                 titleGroup.appendChild(element);
             }
-            const supplements = [...this.modelMap.values()].filter((model) => model.objectType === manuscripts_json_schema_1.ObjectTypes.Supplement);
+            const supplements = [...this.modelMap.values()].filter((model) => model.objectType === json_schema_1.ObjectTypes.Supplement);
             if (supplements && supplements.length > 0) {
                 for (const supplement of supplements) {
                     const supplementaryMaterial = this.document.createElement('supplementary-material');
@@ -481,7 +481,7 @@ class JATSExporter {
                 refList = this.document.createElement('ref-list');
             }
             back.appendChild(refList);
-            const bibliographyItems = this.models.filter((0, object_types_1.hasObjectType)(manuscripts_json_schema_1.ObjectTypes.BibliographyItem));
+            const bibliographyItems = this.models.filter((0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.BibliographyItem));
             for (const bibliographyItem of bibliographyItems) {
                 const ref = this.document.createElement('ref');
                 ref.setAttribute('id', normalizeID(bibliographyItem._id));
@@ -623,6 +623,7 @@ class JATSExporter {
                 attribution: () => ['attrib', 0],
                 bibliography_element: () => '',
                 bibliography_item: () => '',
+                comment_list: () => '',
                 bibliography_section: (node) => [
                     'ref-list',
                     { id: normalizeID(node.attrs.id) },
@@ -1182,7 +1183,7 @@ class JATSExporter {
                         affiliationRIDs.push(...contributor.affiliations);
                     }
                 }
-                const affiliations = this.models.filter((0, object_types_1.hasObjectType)(manuscripts_json_schema_1.ObjectTypes.Affiliation));
+                const affiliations = this.models.filter((0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.Affiliation));
                 if (affiliations) {
                     const usedAffiliations = affiliations.filter((affiliation) => affiliationRIDs.includes(affiliation._id));
                     usedAffiliations.sort((a, b) => affiliationRIDs.indexOf(a._id) - affiliationRIDs.indexOf(b._id));
@@ -1257,9 +1258,9 @@ class JATSExporter {
                     }
                 }
                 const footnotes = [];
-                footnotes.push(...this.models.filter((0, object_types_1.hasObjectType)(manuscripts_json_schema_1.ObjectTypes.Footnote)));
+                footnotes.push(...this.models.filter((0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.Footnote)));
                 const correspodings = [];
-                correspodings.push(...this.models.filter((0, object_types_1.hasObjectType)(manuscripts_json_schema_1.ObjectTypes.Corresponding)));
+                correspodings.push(...this.models.filter((0, object_types_1.hasObjectType)(json_schema_1.ObjectTypes.Corresponding)));
                 if (footnotes || correspodings) {
                     const authorNotesEl = this.document.createElement('author-notes');
                     const usedFootnotes = footnotes.filter((footnote) => {

package/dist/cjs/schema/index.js

@@ -41,6 +41,7 @@ const caption_1 = require("./nodes/caption");
 const caption_title_1 = require("./nodes/caption_title");
 const citation_1 = require("./nodes/citation");
 const comment_1 = require("./nodes/comment");
+const comment_list_1 = require("./nodes/comment_list");
 const cross_reference_1 = require("./nodes/cross_reference");
 const doc_1 = require("./nodes/doc");
 const equation_1 = require("./nodes/equation");
@@ -141,6 +142,7 @@ exports.schema = new prosemirror_model_1.Schema({
     },
     nodes: {
         comment: comment_1.comment,
+        comment_list: comment_list_1.commentList,
         attribution: attribution_1.attribution,
         bibliography_item: bibliography_item_1.bibliographyItem,
         bibliography_element: bibliography_element_1.bibliographyElement,

package/dist/cjs/schema/nodes/blockquote_element.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isBlockquoteElement = exports.blockquoteElement = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 const attributes_1 = require("../../lib/attributes");
 exports.blockquoteElement = {
     content: 'paragraph+ attribution',
@@ -51,7 +51,7 @@ exports.blockquoteElement = {
             attrs.id = blockquoteElementNode.attrs.id;
         }
         attrs.class = (0, attributes_1.buildElementClass)(blockquoteElementNode.attrs);
-        attrs['data-object-type'] = manuscripts_json_schema_1.ObjectTypes.QuoteElement;
+        attrs['data-object-type'] = json_schema_1.ObjectTypes.QuoteElement;
         if (blockquoteElementNode.attrs.placeholder) {
             attrs['data-placeholder-text'] = blockquoteElementNode.attrs.placeholder;
         }

package/dist/{types/transformer/tei-grobid-importer.d.ts → cjs/schema/nodes/comment_list.js}

@@ -1,5 +1,6 @@
+"use strict";
 /*!
- * © 2020 Atypon Systems LLC
+ * © 2019 Atypon Systems LLC
  *
  * Licensed under the Apache License, Version 2.0 (the "License");
  * you may not use this file except in compliance with the License.
@@ -13,8 +14,11 @@
  * See the License for the specific language governing permissions and
  * limitations under the License.
  */
-import { Model } from '@manuscripts/manuscripts-json-schema';
-import { AddModel } from './model-map';
-export declare const parseFront: (doc: Document, addModel: AddModel) => void;
-export declare const parseBack: (doc: Document, addModel: AddModel) => void;
-export declare const parseTEIGROBIDArticle: (doc: Document) => Model[];
+Object.defineProperty(exports, "__esModule", { value: true });
+exports.commentList = void 0;
+exports.commentList = {
+    content: 'comment*',
+    attrs: {
+        id: { default: '' },
+    },
+};

package/dist/cjs/schema/nodes/equation.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.equation = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 exports.equation = {
     attrs: {
         id: { default: '' },
@@ -28,7 +28,7 @@ exports.equation = {
     group: 'block',
     parseDOM: [
         {
-            tag: `div.${manuscripts_json_schema_1.ObjectTypes.Equation}`,
+            tag: `div.${json_schema_1.ObjectTypes.Equation}`,
             getAttrs: (p) => {
                 const dom = p;
                 return {
@@ -44,7 +44,7 @@ exports.equation = {
         const equationNode = node;
         const dom = document.createElement('div');
         dom.setAttribute('id', equationNode.attrs.id);
-        dom.classList.add(manuscripts_json_schema_1.ObjectTypes.Equation);
+        dom.classList.add(json_schema_1.ObjectTypes.Equation);
         if (equationNode.attrs.MathMLStringRepresentation) {
             dom.setAttribute('data-mathml-string-representation', equationNode.attrs.MathMLStringRepresentation);
         }

package/dist/cjs/schema/nodes/inline_equation.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.inlineEquation = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 exports.inlineEquation = {
     attrs: {
         id: { default: '' },
@@ -31,7 +31,7 @@ exports.inlineEquation = {
     group: 'inline',
     parseDOM: [
         {
-            tag: `span.${manuscripts_json_schema_1.ObjectTypes.InlineMathFragment}`,
+            tag: `span.${json_schema_1.ObjectTypes.InlineMathFragment}`,
             getAttrs: (p) => {
                 const dom = p;
                 return {
@@ -46,7 +46,7 @@ exports.inlineEquation = {
     toDOM: (node) => {
         const inlineEquationNode = node;
         const dom = document.createElement('span');
-        dom.classList.add(manuscripts_json_schema_1.ObjectTypes.InlineMathFragment);
+        dom.classList.add(json_schema_1.ObjectTypes.InlineMathFragment);
         dom.setAttribute('id', inlineEquationNode.attrs.id);
         dom.setAttribute('data-tex-representation', inlineEquationNode.attrs.TeXRepresentation);
         if (inlineEquationNode.attrs.MathMLRepresentation) {

package/dist/cjs/schema/nodes/list.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isListNode = exports.listItem = exports.orderedList = exports.bulletList = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 const attributes_1 = require("../../lib/attributes");
 exports.bulletList = {
     content: 'list_item+',
@@ -45,7 +45,7 @@ exports.bulletList = {
                 {
                     id: bulletListNode.attrs.id,
                     class: (0, attributes_1.buildElementClass)(bulletListNode.attrs),
-                    'data-object-type': manuscripts_json_schema_1.ObjectTypes.ListElement,
+                    'data-object-type': json_schema_1.ObjectTypes.ListElement,
                 },
                 0,
             ]
@@ -79,7 +79,7 @@ exports.orderedList = {
                 {
                     id: orderedListNode.attrs.id,
                     class: (0, attributes_1.buildElementClass)(orderedListNode.attrs),
-                    'data-object-type': manuscripts_json_schema_1.ObjectTypes.ListElement,
+                    'data-object-type': json_schema_1.ObjectTypes.ListElement,
                 },
                 0,
             ]

package/dist/cjs/schema/nodes/listing.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isListingNode = exports.listing = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 exports.listing = {
     attrs: {
         id: { default: '' },
@@ -33,7 +33,7 @@ exports.listing = {
     group: 'block',
     parseDOM: [
         {
-            tag: `pre.${manuscripts_json_schema_1.ObjectTypes.Listing}`,
+            tag: `pre.${json_schema_1.ObjectTypes.Listing}`,
             preserveWhitespace: 'full',
             getAttrs: (p) => {
                 const node = p;
@@ -62,7 +62,7 @@ exports.listing = {
         const listingNode = node;
         const dom = document.createElement('div');
         dom.setAttribute('id', listingNode.attrs.id);
-        dom.classList.add(manuscripts_json_schema_1.ObjectTypes.Listing);
+        dom.classList.add(json_schema_1.ObjectTypes.Listing);
         dom.setAttribute('data-language', listingNode.attrs.language);
         dom.setAttribute('data-languageKey', listingNode.attrs.languageKey);
         dom.textContent = listingNode.attrs.contents;

package/dist/cjs/schema/nodes/manuscript.js

@@ -17,7 +17,7 @@
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.manuscript = void 0;
 exports.manuscript = {
-    content: '(section | sections)+',
+    content: '(section | sections)+ comment_list*',
     attrs: {
         id: { default: '' },
     },

package/dist/cjs/schema/nodes/paragraph.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isParagraphNode = exports.paragraph = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 const attributes_1 = require("../../lib/attributes");
 exports.paragraph = {
     content: 'inline*',
@@ -52,7 +52,7 @@ exports.paragraph = {
             attrs.id = paragraphNode.attrs.id;
         }
         attrs.class = (0, attributes_1.buildElementClass)(paragraphNode.attrs);
-        attrs['data-object-type'] = manuscripts_json_schema_1.ObjectTypes.ParagraphElement;
+        attrs['data-object-type'] = json_schema_1.ObjectTypes.ParagraphElement;
         if (paragraphNode.attrs.placeholder) {
             attrs['data-placeholder-text'] = paragraphNode.attrs.placeholder;
         }

package/dist/cjs/schema/nodes/pullquote_element.js

@@ -16,7 +16,7 @@
  */
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.isPullquoteElement = exports.pullquoteElement = void 0;
-const manuscripts_json_schema_1 = require("@manuscripts/manuscripts-json-schema");
+const json_schema_1 = require("@manuscripts/json-schema");
 const attributes_1 = require("../../lib/attributes");
 exports.pullquoteElement = {
     content: 'paragraph+ attribution',
@@ -54,7 +54,7 @@ exports.pullquoteElement = {
             'pullquote',
             (0, attributes_1.buildElementClass)(pullquoteElementNode.attrs),
         ].join(' ');
-        attrs['data-object-type'] = manuscripts_json_schema_1.ObjectTypes.QuoteElement;
+        attrs['data-object-type'] = json_schema_1.ObjectTypes.QuoteElement;
         if (pullquoteElementNode.attrs.placeholder) {
             attrs['data-placeholder-text'] = pullquoteElementNode.attrs.placeholder;
         }