@macrostrat/column-views 2.3.0 → 2.3.2

package/src/units/names.ts

@@ -1,20 +1,24 @@
 import h from "@macrostrat/hyper";
-import { useCallback, useMemo } from "react";
+import { useCallback } from "react";
 import {
   ColumnAxisType,
   NotesColumn,
-  NotesColumnProps,
+  type ColumnDivision,
+  type NoteData,
+  type NotesColumnProps,
 } from "@macrostrat/column-components";
-import type { ColumnDivision } from "@macrostrat/column-components";
-import { IUnit } from "./types";
+import type { IUnit } from "./types";
 import React from "react";
-import { getUnitHeightRange } from "../prepare-units/utils";
-import { CompositeColumnScale } from "./composite";
 import { useCompositeScale, useMacrostratColumnData } from "../data-provider";
+import {
+  type CompositeColumnScale,
+  getUnitHeightRange,
+} from "../prepare-units";
 
 interface UnitDataProps extends NotesColumnProps {
   left?: number;
   transform?: string;
+  nameForDivision?(obj: IUnit): string;
   noteComponent?: React.ComponentType<any>;
   shouldRenderNote?(div: ColumnDivision | IUnit, index: number): boolean;
   divisions?: IUnit[];
@@ -22,26 +26,29 @@ interface UnitDataProps extends NotesColumnProps {
   scale?: CompositeColumnScale;
 }
 
-type UnitNote = {
+interface UnitNote extends NoteData {
   height: number;
   top_height: number;
   data: IUnit;
   id: number;
-};
+}
 
 function noteForDivision(
   div: IUnit,
-  opts: { axisType: ColumnAxisType },
+  opts: { axisType: ColumnAxisType; nameForDivision?: (obj: IUnit) => string },
 ): UnitNote {
   const { axisType } = opts;
 
   const [height, top_height] = getUnitHeightRange(div, axisType);
 
+  const nameForDivision = opts.nameForDivision ?? defaultNameFunction;
+
   return {
     height,
     top_height,
     data: div,
     id: div.unit_id,
+    note: nameForDivision(div),
   };
 }
 
@@ -59,6 +66,7 @@ function UnitDataColumn_(props: UnitDataProps) {
     left = 0,
     noteComponent,
     shouldRenderNote = (note: ColumnDivision | IUnit, i: number) => true,
+    nameForDivision,
     minimumHeight = 0,
     divisions = units,
     ...rest
@@ -76,7 +84,7 @@ function UnitDataColumn_(props: UnitDataProps) {
   if (divisions == null) return null;
   const notes: UnitNote[] = divisions
     .filter(shouldRenderNote)
-    .map((d: IUnit) => noteForDivision(d, { axisType }))
+    .map((d: IUnit) => noteForDivision(d, { axisType, nameForDivision }))
     .filter(minimumHeightFilter);
 
   return h(NotesColumn, {
@@ -93,33 +101,23 @@ function UnitDataColumn_(props: UnitDataProps) {
 
 const UnitDataColumn = React.memo(UnitDataColumn_);
 
-interface UnitNamesProps extends UnitDataProps {
-  nameForDivision?(obj: IUnit): string;
+export interface UnitNamesProps extends UnitDataProps {
   paddingLeft?: number;
   width: number;
   onClickNote?: (note: any) => void;
 }
 
-export function UnitNamesColumn(props: UnitNamesProps) {
-  const {
-    nameForDivision = defaultNameFunction,
-    noteComponent,
-    ...rest
-  } = props;
-
-  const defaultNoteComponent = useMemo(
-    () => (props) => {
-      const { note } = props;
-      return h("p.col-note-label", nameForDivision(note.data));
-    },
-    [nameForDivision],
-  );
+function UnitNameNote(props: { note: UnitNote }) {
+  const { note } = props;
+  return h("p.col-note-label", note.note);
+}
 
+export function UnitNamesColumn(props: UnitNamesProps) {
+  const { noteComponent = UnitNameNote, ...rest } = props;
   return h(UnitDataColumn, {
-    noteComponent: noteComponent ?? defaultNoteComponent,
+    noteComponent,
     ...rest,
   });
 }
 
-export type { UnitNamesProps };
 export { defaultNameFunction, noteForDivision, UnitDataColumn };

package/dist/esm/column-views.322790f3.js.map

@@ -1 +0,0 @@
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a.cltn_name ?? \"\";\n    const nameB = b.best_name ?? b.cltn_name ?? \"\";\n    return nameA.localeCompare(nameB);\n  });\n\n  return h(TruncatedList, {\n    data,\n    className: \"fossil-collections\",\n    itemRenderer: PBDBCollectionLink,\n    maxItems: focused ? Infinity : (maxItems ?? 5),\n  });\n}\n\nconst FocusedFossilInfo = (props: FossilItemProps) =>\n  h(FossilInfo, { ...props, maxItems: Infinity });\n\nfunction PBDBCollectionLink({\n  data,\n}: {\n  data: PBDBCollection | PBDBOccurrence;\n}) {\n  /** A link to a PBDB collection that handles either an occurrence or collection object */\n  return h(\n    \"a.link-id\",\n    {\n      href: `https://paleobiodb.org/app/collections#display=col:${data.cltn_id}`,\n      target: \"_blank\",\n      onClick(e) {\n        e.stopPropagation();\n      },\n    },\n    data.best_name ?? data.cltn_name,\n  );\n}\n\ninterface PreparePBDBDataOptions {\n  /** If set, group close notes within this distance (in pixels in display space)\n   * into a single note. If a number is provided, that number is used as the distance,\n   * otherwise a default of 5 pixels is used.\n   */\n  groupCloseNotes?: boolean | number;\n}\n\nfunction preparePBDBData<T extends PBDBEntity>(\n  data: T[],\n  units: UnitLong[],\n  scale: CompositeColumnScale,\n  axisType: ColumnAxisType,\n  options?: { groupCloseNotes?: boolean | number },\n) {\n  /** Prepare PBDB fossil data for display in a measurements column */\n  const { groupCloseNotes = true } = options ?? {};\n  const groupDistance =\n    typeof groupCloseNotes === \"number\" ? groupCloseNotes : 10;\n\n  // Map of data to its defined height ranges\n  const dataMap = new Map<string, ColumnMeasurementData<T[]>>();\n\n  // Todo: if we wanted, we could add a step where we group notes that are too close together here...\n\n  for (const d of data) {\n    const range = getHeightRangeForPBDBEntity(d, units, axisType);\n\n    if (range == null) continue;\n    const { height, top_height } = range;\n    // compose the key based on height info\n    let key = `${height}`;\n    if (top_height != null) {\n      key += `-${top_height}`;\n    }\n\n    // Group by height key\n    if (!dataMap.has(key)) {\n      dataMap.set(key, {\n        height,\n        top_height: top_height ?? height,\n        data: [],\n        id: key,\n      });\n    }\n    dataMap.get(key)!.data.push(d);\n  }\n\n  return groupNotesByPixelDistance(\n    Array.from(dataMap.values()),\n    scale,\n    axisType,\n    groupDistance,\n  );\n}\n\nfunction getHeightRangeForPBDBEntity<T extends PBDBEntity>(\n  d: T,\n  units: UnitLong[],\n  axisType: ColumnAxisType,\n): MeasurementHeightData | null {\n  let height: number | null = null;\n  if (d.slb != null && d.slu == \"mbsf\") {\n    // Meters below sea floor - special case for eODP where we have\n    // specific depth data referenced\n    height = Number(d.slb);\n    if (axisType === ColumnAxisType.DEPTH) {\n      // Data is already in depth units\n      return { height };\n    }\n  }\n  if (d.unit_id == null) return null;\n  if (height != null) {\n    // If we have both height and unit info, we need to adjust the height\n    // to fit whatever scale type we're using.\n    // TODO: we could improve how this works by having concurrent age and\n    // height scales, which would allow us to do this without having to\n    // reference to a specific unit.\n    const unit = units.find((u) => u.unit_id === d.unit_id);\n    if (unit == null) return null;\n    const relHeight = getRelativePositionInUnit(\n      height,\n      unit,\n      ColumnAxisType.DEPTH,\n    );\n    if (relHeight == null) return null;\n    height = getPositionWithinUnit(relHeight, unit, axisType);\n    return { height };\n  }\n  // We can just get the height within the unit, clipped to the unit boundaries\n  return standardizeMeasurementHeight({ unit_id: d.unit_id }, units, axisType);\n}\n\nfunction getRelativePositionInUnit<T extends PBDBEntity>(\n  pos: number,\n  unit: UnitLong,\n  axisType: ColumnAxisType,\n): number | null {\n  // This is the inverse of getPositionWithinUnit\n  const heights = getUnitHeightRange(unit, axisType, false);\n  const scale = scaleLinear(heights).domain([0, 1]);\n  const relPos = scale.invert(pos);\n  if (relPos < 0 || relPos > 1) return null;\n  return relPos;\n}\n"],"names":[],"version":3,"file":"column-views.322790f3.js.map"}

package/dist/esm/column-views.343fc926.js.map

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Here\n  // we create a unified view of data over both sources.\n  return useAsyncMemo(async () => {\n    if (col_id == null) return null;\n    return await fetchFossilData(col_id, type);\n  }, [col_id, type]);\n}\n\nasync function fetchMacrostratFossilData(\n  col_id: number,\n  type: FossilDataType,\n): Promise<PBDBCollection[]> {\n  if (type !== FossilDataType.Collections) {\n    // Macrostrat API only supports collections\n    return [];\n  }\n\n  // Fetch fossil collections linked to columns from the Macrostrat API\n  const resp = await fetch(\n    `https://macrostrat.org/api/fossils?col_id=${col_id}`,\n  );\n  const res = await resp.json();\n  // Create collections from Macrostrat data\n  return res.success.data;\n}\n\nasync function fetchPDBDFossilData(\n  col_id: number,\n  type: FossilDataType,\n): Promise<PBDBCollection[]> {\n  // Note: show=rank does not work on training PBDB server\n  const resp = await fetch(\n    pbdbAPIBase + `/${type}/list.json?ms_column=${col_id}&show=mslink,stratext`,\n  );\n  const res = await resp.json();\n  return res.records.map(\n    type == FossilDataType.Collections\n      ? createMacrostratCollection\n      : preprocessOccurrence,\n  );\n}\n\nasync function fetchFossilData<T extends PBDBEntity>(\n  colID: number,\n  type: FossilDataType,\n): Promise<T[]> {\n  const [macrostratData, pbdbData] = await Promise.all([\n    fetchMacrostratFossilData(colID, type),\n    fetchPDBDFossilData(colID, type),\n  ]);\n  return [...macrostratData, ...pbdbData];\n}\n\nfunction preprocessOccurrence(d): PBDBOccurrence {\n  if (d.msu == null || d.msc == null) {\n    return d;\n  }\n  /* Preprocess data for an occurrence into a Macrostrat-like format */\n  // Standardize names of Macrostrat units and columns\n  const unit_id = parseInt(d.msu.replace(/^\\w+:/, \"\"));\n  const col_id = parseInt(d.msc.replace(/^\\w+:/, \"\"));\n\n  // taxon names may be stored in different fields\n  const occ_id = parseInt(d.oid.replace(/^occ:/, \"\"));\n  const cltn_id = parseInt(d.cid.replace(/^col:/, \"\"));\n\n  return {\n    ...d,\n    unit_id,\n    col_id,\n    taxon_name: d.tna,\n    best_name: d.idn ?? d.tna,\n    occ_id,\n    cltn_id,\n    cltn_name: d.nam,\n  };\n}\n\nfunction createMacrostratCollection(d): PBDBCollection {\n  /* Preprocess data for a collection into a Macrostrat-like format */\n  let unit_id = null;\n  let col_id = null;\n  // Standardize names of Macrostrat units and columns\n  if (d.msu != null) {\n    unit_id = parseInt(d.msu.replace(/^\\w+:/, \"\"));\n  }\n  if (d.msc != null) {\n    col_id = parseInt(d.msc.replace(/^\\w+:/, \"\"));\n  }\n\n  // taxon names may be stored in different fields\n  let taxon_name = d.tna;\n  let occ_id = null;\n  if (d.oid != null && d.oid.startsWith(\"occ:\")) {\n    occ_id = parseInt(d.oid.replace(/^occ:/, \"\"));\n  }\n  if (d.idn != null) {\n    taxon_name = d.idn;\n  }\n\n  let cltn_id = d.cltn_id;\n  if (d.oid != null && d.oid.startsWith(\"col:\")) {\n    cltn_id = parseInt(d.oid.replace(/^col:/, \"\"));\n  } else if (d.cid != null && d.cid.startsWith(\"col:\")) {\n    cltn_id = parseInt(d.cid.replace(/^col:/, \"\"));\n  }\n\n  return {\n    ...d,\n    unit_id,\n    col_id,\n    taxon_name,\n    occ_id,\n    cltn_id,\n    cltn_name: d.nam,\n    t_age: d.t_age,\n    b_age: d.b_age,\n  };\n}\n"],"names":[],"version":3,"file":"column-views.343fc926.js.map"}

package/dist/esm/column-views.3c9cba65.js

@@ -1,13 +0,0 @@
-import {PBDBFossilsColumn as $b9286605a04210d4$export$554267114407ef68, FossilDataType as $a3ff7da576c02df0$export$a990c76b38782f57, PBDBOccurrencesMatrix as $d419340b86dbd2ea$export$652730986cccff7a} from "./column-views.322790f3.js";
-import {DetritalColumn as $715dd5fedd79146a$export$f176396e104db8d5, DetritalGroup as $715dd5fedd79146a$export$1b3047373cd1c8c7} from "./column-views.c3c7901a.js";
-import {IsotopesDataset as $d71d096cfe00860f$export$c69bd0285aa5d775, IsotopesColumn as $d71d096cfe00860f$export$5d8aa8022c284748, MeasurementDataContext as $5dbb619f2c7bef60$export$c644ef985ce7a4c4, MeasurementDataProvider as $5dbb619f2c7bef60$export$5f01d5b342a89841, useMeasurementData as $5dbb619f2c7bef60$export$8a0335fd9ff72150} from "./column-views.0da4503a.js";
-import {standardizeMeasurementHeight as $50d219504625a431$export$9d101e1fcb2166a6, mergeHeightRanges as $50d219504625a431$export$8f2afa8ddee7317e, BaseMeasurementsColumn as $50d219504625a431$export$ce5c4f2fdf4e644d, TruncatedList as $50d219504625a431$export$653e47a7a0da0f0d, groupNotesByPixelDistance as $50d219504625a431$export$4e649f790614b299, SGPMeasurementsColumn as $c8e156b0b9c785ec$export$c49cf57576706bab} from "./column-views.6df65dab.js";
-
-
-
-
-
-
-
-export {$b9286605a04210d4$export$554267114407ef68 as PBDBFossilsColumn, $a3ff7da576c02df0$export$a990c76b38782f57 as FossilDataType, $a3ff7da576c02df0$export$a990c76b38782f57 as FossilDataType, $d419340b86dbd2ea$export$652730986cccff7a as PBDBOccurrencesMatrix, $715dd5fedd79146a$export$f176396e104db8d5 as DetritalColumn, $715dd5fedd79146a$export$1b3047373cd1c8c7 as DetritalGroup, $d71d096cfe00860f$export$c69bd0285aa5d775 as IsotopesDataset, $d71d096cfe00860f$export$5d8aa8022c284748 as IsotopesColumn, $5dbb619f2c7bef60$export$c644ef985ce7a4c4 as MeasurementDataContext, $5dbb619f2c7bef60$export$5f01d5b342a89841 as MeasurementDataProvider, $5dbb619f2c7bef60$export$8a0335fd9ff72150 as useMeasurementData, $50d219504625a431$export$9d101e1fcb2166a6 as standardizeMeasurementHeight, $50d219504625a431$export$8f2afa8ddee7317e as mergeHeightRanges, $50d219504625a431$export$ce5c4f2fdf4e644d as BaseMeasurementsColumn, $50d219504625a431$export$653e47a7a0da0f0d as TruncatedList, $50d219504625a431$export$4e649f790614b299 as groupNotesByPixelDistance, $c8e156b0b9c785ec$export$c49cf57576706bab as SGPMeasurementsColumn};
-//# sourceMappingURL=column-views.3c9cba65.js.map

package/dist/esm/column-views.40094dd9.js.map

@@ -1 +0,0 @@
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package/dist/esm/column-views.403a7b48.css.map

@@ -1 +0,0 @@
-{"mappings":"AACA;;;;;;;AAMA;;;;AAOM;;;;AAGJ;;;;AAGA","sources":["packages/column-views/src/facets/detrital-zircon/index.module.sass"],"sourcesContent":["\n.depositional-age\n  fill: var(--column-stroke-color)\n  fill-opacity: 0.25\n  stroke-width: 1px\n  stroke: var(--column-stroke-color)\n\n.detrital-group\n  margin: -5px\n  margin-left: -10px\n  margin-bottom: -36px\n\n  &.hide-axis :global .visx-axis\n    tspan, text\n      display: none\n\n.dz-spectra\n  position: relative\n\n.floating-axis\n  position: sticky\n  bottom: 0\n"],"names":[],"version":3,"file":"column-views.403a7b48.css.map"}

package/dist/esm/column-views.5eb4e6ff.js.map

@@ -1 +0,0 @@
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hyper from \"@macrostrat/hyper\";\nimport styles from \"./panel.module.sass\";\nimport { JSONView } from \"@macrostrat/ui-components\";\nimport { Button, ButtonGroup } from \"@blueprintjs/core\";\nimport { ReactNode, useMemo, useState } from \"react\";\nimport {\n  DataField,\n  EnvironmentsList,\n  IntervalShort,\n  IntervalTag,\n  ItemList,\n  LithologyList,\n  LithologyTagFeature,\n  Parenthetical,\n  Value,\n} from \"@macrostrat/data-components\";\nimport {\n  useColumnUnitsMap,\n  useMacrostratData,\n  useMacrostratDefs,\n} from \"../data-provider\";\nimport type {\n  Environment,\n  UnitLong,\n  UnitLongFull,\n  Lithology,\n  Interval,\n  StratUnit,\n} from \"@macrostrat/api-types\";\nimport { defaultNameFunction } from \"../units/names\";\nimport classNames from \"classnames\";\n\nconst h = hyper.styled(styles);\n\nexport function UnitDetailsPanel({\n  unit,\n  onClose,\n  className,\n  features = new Set<UnitDetailsFeature>([\n    UnitDetailsFeature.AdjacentUnits,\n    UnitDetailsFeature.OutcropType,\n    UnitDetailsFeature.JSONToggle,\n    UnitDetailsFeature.DepthRange,\n  ]),\n  lithologyFeatures,\n  actions,\n  hiddenActions = null,\n  onSelectUnit,\n  columnUnits,\n  onClickItem,\n}: {\n  unit: any;\n  onClose?: any;\n  showLithologyProportions?: boolean;\n  className?: string;\n  actions?: ReactNode;\n  hiddenActions?: ReactNode;\n  features?: Set<UnitDetailsFeature>;\n  lithologyFeatures?: Set<LithologyTagFeature>;\n  columnUnits?: UnitLong[];\n  onSelectUnit?: (unitID: number) => void;\n  onClickItem?: (item: any) => void;\n}) {\n  const [showJSON, setShowJSON] = useState(false);\n\n  let content = null;\n  if (showJSON) {\n    content = h(JSONView, { data: unit, showRoot: false });\n  } else {\n    content = h(UnitDetailsContent, {\n      unit,\n      features,\n      lithologyFeatures,\n      onClickItem,\n      onSelectUnit,\n    });\n  }\n\n  let title = defaultNameFunction(unit);\n\n  if (features.has(UnitDetailsFeature.JSONToggle)) {\n    hiddenActions = h([\n      h(Button, {\n        icon: \"code\",\n        small: true,\n        minimal: true,\n        key: \"json-view-toggle\",\n        className: classNames(\"json-view-toggle\", { enabled: setShowJSON }),\n        onClick(evt) {\n          setShowJSON(!showJSON);\n          evt.stopPropagation();\n        },\n      }),\n      hiddenActions,\n    ]);\n  }\n\n  return h(\"div.unit-details-panel\", { className }, [\n    h(LegendPanelHeader, {\n      onClose,\n      title,\n      id: unit.unit_id,\n      actions,\n      hiddenActions,\n    }),\n    h(\"div.unit-details-content-holder\", content),\n  ]);\n}\n\nexport function LegendPanelHeader({\n  title,\n  id,\n  onClose,\n  actions = null,\n  hiddenActions,\n}: {\n  title?: string | null;\n  id?: number | null;\n  onClose?: () => void;\n  actions?: ReactNode | null;\n  hiddenActions?: ReactNode | null;\n}) {\n  return h(\"header.legend-panel-header\", [\n    h(\"div.title-container\", [\n      h.if(title != null)(\"h3\", title),\n      h.if(hiddenActions != null)(\n        \"span.hidden-actions-container\",\n        h(\"div.hidden-actions\", hiddenActions),\n      ),\n    ]),\n    h(\"div.spacer\"),\n    h.if(id != null)(\"code.unit-id\", id),\n    h.if(actions != null)(ButtonGroup, { minimal: true }, actions),\n    h.if(onClose != null)(Button, {\n      icon: \"cross\",\n      minimal: true,\n      small: true,\n      onClick() {\n        onClose();\n      },\n    }),\n  ]);\n}\n\nexport enum UnitDetailsFeature {\n  AdjacentUnits = \"adjacent-units\",\n  Color = \"color\",\n  OutcropType = \"outcrop-type\",\n  JSONToggle = \"json-toggle\",\n  DepthRange = \"depth-range\",\n}\n\nfunction UnitDetailsContent({\n  unit,\n  onSelectUnit,\n  columnUnits,\n  lithologyFeatures = new Set([\n    LithologyTagFeature.Proportion,\n    LithologyTagFeature.Attributes,\n  ]),\n  features = new Set<UnitDetailsFeature>([\n    UnitDetailsFeature.AdjacentUnits,\n    UnitDetailsFeature.OutcropType,\n  ]),\n  onClickItem,\n  getItemHref,\n}: {\n  unit: UnitLong;\n  onSelectUnit?: (unitID: number) => void;\n  columnUnits?: UnitLong[];\n  lithologyFeatures?: Set<LithologyTagFeature>;\n  features?: Set<UnitDetailsFeature>;\n  onClickItem?: (\n    event: MouseEvent,\n    item:\n      | Lithology\n      | Environment\n      | UnitLong\n      | Interval\n      | { strat_name_id: number },\n  ) => void;\n  getItemHref?: (item: Lithology | Environment | UnitLong) => string | null;\n}) {\n  const lithMap = useMacrostratDefs(\"lithologies\");\n  const envMap = useMacrostratDefs(\"environments\");\n\n  const environments = enhanceEnvironments(unit.environ, envMap);\n  const lithologies = enhanceLithologies(unit.lith ?? [], lithMap);\n\n  // Create a lookup table of units if provided\n  const columnUnitsMap = useMemo(() => {\n    const map = new Map<number, UnitLong>();\n    for (const colUnit of columnUnits ?? []) {\n      map.set(colUnit.unit_id, colUnit);\n    }\n    return map;\n  }, [columnUnits]);\n\n  let outcropField = null;\n  if (features.has(UnitDetailsFeature.OutcropType)) {\n    // Determine outcrop type\n    let outcrop = unit.outcrop;\n    if (outcrop == \"both\") {\n      outcrop = \"surface and subsurface\";\n    }\n    outcropField = h(DataField, {\n      label: \"Outcrop\",\n      value: outcrop,\n    });\n  }\n\n  let thicknessOrHeightRange = null;\n  const [thickness, thicknessUnit] = getThickness(unit);\n  // Proxy for actual heights in t_pos and b_pos\n  if (\n    features.has(UnitDetailsFeature.DepthRange) &&\n    unit.t_pos != null &&\n    unit.b_pos != null &&\n    unit.min_thick == unit.max_thick && // We have an actual fixed height\n    unit.min_thick != 0 // Not a zero thickness\n  ) {\n    const label = unit.t_pos < unit.b_pos ? \"Depth\" : \"Height\";\n    const u1 = \"m\";\n\n    thicknessOrHeightRange = h(DataField, {\n      unit: u1,\n      label,\n      value: formatRange(unit.b_pos, unit.t_pos),\n      children: h(\n        Parenthetical,\n        h(Value, { value: thickness, unit: thicknessUnit }),\n      ),\n    });\n  }\n  thicknessOrHeightRange ??= h(DataField, {\n    label: \"Thickness\",\n    value: thickness,\n    unit: thicknessUnit,\n  });\n\n  /** We are trying to move away from passing the \"color\" parameter in the API */\n  let colorSwatch: ReactNode = null;\n  if (\"color\" in unit && features.has(UnitDetailsFeature.Color)) {\n    const unit1 = unit as UnitLongFull;\n    colorSwatch = h(\"div.color-swatch\", {\n      style: { backgroundColor: unit1.color },\n    });\n  }\n\n  return h(\"div.unit-details-content\", [\n    thicknessOrHeightRange,\n    h(LithologyList, {\n      label: \"Lithology\",\n      lithologies,\n      features: lithologyFeatures,\n      getItemHref,\n      onClickItem,\n    }),\n    h(AgeField, { unit }, [\n      h(Parenthetical, h(Duration, { value: unit.b_age - unit.t_age })),\n      h(IntervalProportions, {\n        unit,\n        onClickItem,\n      }),\n    ]),\n    h(EnvironmentsList, {\n      environments,\n      onClickItem,\n      getItemHref,\n    }),\n    h.if(unit.strat_name_id != null)(StratNameField, {\n      strat_name_id: unit.strat_name_id,\n    }),\n    outcropField,\n    h.if(features.has(UnitDetailsFeature.AdjacentUnits))([\n      h(\n        DataField,\n        { label: \"Above\" },\n        h(UnitIDList, {\n          units: unit.units_above,\n          onSelectUnit,\n          showNames: true,\n        }),\n      ),\n      h(\n        DataField,\n        { label: \"Below\" },\n        h(UnitIDList, {\n          units: unit.units_below,\n          onSelectUnit,\n          showNames: true,\n        }),\n      ),\n    ]),\n    colorSwatch,\n    h(ReferencesField, { refs: unit.refs, inline: true }),\n  ]);\n}\n\nexport function ReferencesField({ refs, className = null, ...rest }) {\n  if (refs == null || refs.length === 0) {\n    return null;\n  }\n\n  return h(\n    DataField,\n    {\n      label: \"References\",\n      className: classNames(\"refs-field\", className),\n      ...rest,\n    },\n    h(BibInfo, { refs }),\n  );\n}\n\nfunction StratNameField({\n  strat_name_id,\n  onClickItem,\n}: {\n  strat_name_id: number;\n  onClickItem?: (event: MouseEvent, item: { strat_name_id: number }) => void;\n}) {\n  const stratNames = useMemo(() => [strat_name_id], [strat_name_id]);\n  const data = useMacrostratData(\"strat_names\", stratNames);\n  const stratNameData = data?.[0];\n  let inner: any = h(Identifier, { id: strat_name_id });\n  const name = stratNameData?.strat_name_long;\n  if (name != null) {\n    inner = h(\"span.strat-name\", name);\n  }\n\n  const clickable = onClickItem != null;\n\n  const className = classNames({\n    clickable,\n  });\n\n  return h(\n    DataField,\n    {\n      label: \"Stratigraphic name\",\n    },\n    h(\n      clickable ? \"a\" : \"span\",\n      {\n        className,\n        onClick: (e) => onClickItem(e, { strat_name_id }),\n      },\n      inner,\n    ),\n  );\n}\n\nfunction getThickness(unit): [string, string] {\n  let minThickness = unit.min_thick ?? 0;\n  let maxThickness = unit.max_thick ?? unit.min_thick ?? 0;\n  let _unit = \"m\";\n\n  if (minThickness == 0 && maxThickness == 0) {\n    return [\"Unknown\", null];\n  }\n\n  if (minThickness < 0.8 && maxThickness < 1.2) {\n    // Convert to cm\n    minThickness = minThickness * 100;\n    maxThickness = maxThickness * 100;\n    _unit = \"cm\";\n  } else if (minThickness > 800 && maxThickness > 1200) {\n    // Convert to km\n    minThickness = minThickness / 1000;\n    maxThickness = maxThickness / 1000;\n    _unit = \"km\";\n  }\n\n  if (minThickness == maxThickness) {\n    return [formatSignificance(minThickness), _unit];\n  }\n\n  return [formatRange(minThickness, maxThickness), _unit];\n}\n\nfunction ThicknessField({ unit, label = \"Thickness\" }) {\n  const [value, thicknessUnit] = getThickness(unit);\n  return h(DataField, {\n    label,\n    value,\n    unit: thicknessUnit,\n  });\n}\n\nfunction BibInfo({ refs }) {\n  const refData = useMacrostratData(\"refs\", refs);\n\n  if (refData == null || refData.length === 0) {\n    return null;\n  }\n\n  if (refData.length == 1) {\n    return h(Citation, {\n      data: refData[0],\n      tag: \"span\",\n      key: refData[0].ref_id,\n    });\n  }\n\n  return h(\n    \"ul.refs\",\n    refData.map((data, i) =>\n      h(Citation, { data, tag: \"li\", key: data.ref_id }),\n    ),\n  );\n}\n\nfunction Citation({ data, tag = \"p\" }) {\n  return h(tag, { className: \"citation\" }, [\n    h(\"span.authors\", data.author),\n    \", \",\n    h(\"span.year\", data.pub_year),\n    \", \",\n    h(\"span.title\", data.ref),\n  ]);\n}\n\nfunction AgeField({ unit, children }) {\n  const [b_age, t_age, _unit] = getAgeRange(unit);\n\n  return h(\n    DataField,\n    {\n      label: \"Age\",\n      value: formatRange(b_age, t_age),\n      unit: _unit,\n    },\n    children,\n  );\n}\n\nfunction getAgeRange(_unit) {\n  let b_age = _unit.b_age;\n  let t_age = _unit.t_age;\n  let unit = \"Ma\";\n\n  if (b_age < 0.8 && t_age < 1.2) {\n    b_age *= 1000;\n    t_age *= 1000;\n    unit = \"ka\";\n  } else if (b_age > 800 && t_age > 1200) {\n    b_age /= 1000;\n    t_age /= 1000;\n    unit = \"Ga\";\n  }\n\n  return [b_age, t_age, unit];\n}\n\nfunction getAge(value) {\n  /** Get the age value in Ma, ka, or Ga as appropriate */\n  let unit = \"Ma\";\n  if (value < 0.8) {\n    unit = \"ka\";\n    value *= 1000;\n    if (value < 5) {\n      unit = \"yr\";\n      value *= 1000;\n    }\n  } else if (value > 1000) {\n    unit = \"Ga\";\n    value /= 1000;\n  }\n\n  return [value, unit];\n}\n\nexport function AgeLabel({\n  age,\n  maximumFractionDigits = 2,\n  minimumFractionDigits = 0,\n  className,\n}: {\n  age: number;\n  className?: string;\n  maximumFractionDigits?: number;\n  minimumFractionDigits?: number;\n}) {\n  /** Component to display a single age value with unit conversion from\n   * Ma to ka or Ga as appropriate.\n   */\n  const [value, unit] = getAge(age);\n\n  const _value = value.toLocaleString(\"en-US\", {\n    maximumFractionDigits,\n    minimumFractionDigits,\n  });\n\n  return h(Value, { value: _value, unit, className });\n}\n\nexport function Duration({\n  value,\n  maximumFractionDigits = 2,\n  minimumFractionDigits = 0,\n}) {\n  let unit = \"Myr\";\n  if (value < 0.8) {\n    unit = \"kyr\";\n    value *= 1000;\n    if (value < 5) {\n      unit = \"yr\";\n      value *= 1000;\n    }\n  } else if (value > 1000) {\n    unit = \"Gyr\";\n    value /= 1000;\n  }\n\n  let _value = value.toLocaleString(\"en-US\", {\n    maximumFractionDigits,\n    minimumFractionDigits,\n  });\n\n  return h(Value, { value: _value, unit });\n}\n\nfunction enhanceEnvironments(\n  environments: Partial<Environment>[],\n  envMap: Map<number, Environment>,\n) {\n  return environments.map((env) => {\n    return {\n      ...(envMap?.get(env.environ_id) ?? {}),\n      ...env,\n    };\n  });\n}\n\nfunction enhanceLithologies(\n  lithologies: Partial<UnitLong[\"lith\"]>,\n  lithMap: Map<number, any>,\n) {\n  return lithologies.map((lith) => {\n    return {\n      ...(lithMap?.get(lith.lith_id) ?? {}), // get lithology details\n      ...lith, // override with the unit's specific lithology data\n    };\n  });\n}\n\nexport function ClickableText({\n  onClick,\n  className,\n  children,\n}: {\n  onClick: () => void;\n  className?: string;\n  children: ReactNode;\n}) {\n  /** An optionally clickable text element */\n  const tag = onClick != null ? \"a\" : \"span\";\n  return h(tag, { onClick, className }, children);\n}\n\nexport function Identifier({\n  id,\n  onClick,\n  className,\n}: {\n  id: number | string;\n  onClick?: (id: number | string) => void;\n  className?: string;\n}) {\n  /** An item that displays a numeric identifier, optionally clickable */\n  const _onClick = onClick != null ? () => onClick(id) : null;\n\n  return h(\n    ClickableText,\n    {\n      onClick: _onClick,\n      className: classNames(\"identifier\", className),\n    },\n    id,\n  );\n}\n\ntype UnitInfo = {\n  unitID: number;\n  colID?: number;\n  name?: string;\n};\n\nfunction UnitIDList({ units, onSelectUnit, showNames = false }) {\n  const unitsMap = useColumnUnitsMap();\n\n  const extUnits: UnitInfo[] = useMemo(() => {\n    const u1 = units.filter((d) => d != 0);\n    if (showNames) {\n      return u1.map((unitID) => {\n        const unitData = unitsMap?.get(unitID);\n        let name: string = undefined;\n        if (unitData != null) {\n          name = defaultNameFunction(unitData);\n        }\n        return {\n          unitID,\n          colID: unitData?.col_id,\n          name,\n        };\n      });\n    } else {\n      return u1.map((unitID) => ({ unitID }));\n    }\n  }, [units, unitsMap]);\n\n  if (extUnits.length === 0) {\n    return h(\"span.no-units\", \"None\");\n  }\n\n  return h(\n    ItemList,\n    { className: \"units-list\" },\n    extUnits.map((info) =>\n      h(\"span.item\", h(UnitIdentifier, { ...info, onSelectUnit })),\n    ),\n  );\n}\n\nfunction UnitIdentifier({\n  unitID,\n  colID,\n  name,\n  onSelectUnit,\n}: UnitInfo & { onSelectUnit?: (unitID: number) => void }) {\n  const onClick = useMemo(() => {\n    if (onSelectUnit == null) return null;\n    return () => {\n      onSelectUnit(unitID);\n    };\n  }, [onSelectUnit]);\n\n  if (name != null) {\n    return h(\n      ClickableText,\n      {\n        className: \"unit-name\",\n        onClick,\n      },\n      name,\n    );\n  }\n\n  return h(Identifier, {\n    className: \"unit-id\",\n    onClick,\n    key: unitID,\n    id: unitID,\n  });\n}\n\nfunction IntervalProportions({ unit, onClickItem }) {\n  const i0 = unit.b_int_id;\n  const i1 = unit.t_int_id;\n  let b_prop = unit.b_prop ?? 0;\n  let t_prop = unit.t_prop ?? 1;\n\n  const intervalMap = useMacrostratDefs(\"intervals\");\n  const int0 = intervalMap?.get(i0) ?? {};\n\n  const interval0: IntervalShort = {\n    ...int0,\n    id: i0,\n    name: unit.b_int_name,\n  };\n\n  let p0: ReactNode = null;\n  const int1 = intervalMap?.get(i1) ?? {};\n  const p1: ReactNode = h(Proportion, { value: t_prop });\n\n  if (i0 !== i1 || b_prop !== 0 || t_prop !== 1) {\n    // We have a single interval with undefined proportions\n    p0 = h(Proportion, { value: b_prop });\n  }\n\n  if (i0 === i1 && (b_prop !== 0 || t_prop !== 1)) {\n    p0 = h(\"span.joint-proportion\", [p0, h(\"span.sep\", \"to\"), p1]);\n  }\n\n  const clickable = onClickItem != null;\n\n  const handleClick = (event: MouseEvent) => {\n    if (onClickItem) {\n      onClickItem(event, interval0);\n    }\n  };\n\n  return h(\"div.interval-proportions\", [\n    h(IntervalTag, {\n      className: clickable ? \"clickable\" : \"\",\n      onClick: clickable ? handleClick : undefined,\n      interval: interval0,\n      prefix: p0,\n    }),\n    h.if(i0 != i1)(\"span.discourage-break\", [\n      h(\"span.sep\", \"to\"),\n      h(IntervalTag, {\n        className: clickable ? \"clickable\" : \"\",\n        onClick: clickable ? handleClick : undefined,\n        interval: {\n          ...int1,\n          id: i1,\n          name: unit.t_int_name,\n        },\n        prefix: p1,\n      }),\n    ]),\n  ]);\n}\n\nconst formatProportion = (d) => {\n  if (d == null) return null;\n  return d.toFixed(1);\n};\n\nfunction Proportion({ value }) {\n  let content = null;\n  if (value == 0) {\n    content = \"base\";\n  } else if (value == 1) {\n    content = \"top\";\n  } else {\n    content = formatProportion(value * 100) + \"%\";\n  }\n\n  return h(\"span.proportion\", content);\n}\n\nfunction formatRange(min, max, precision = null) {\n  if (min == null || max == null) return null;\n  if (min === max) {\n    return min.toFixed(precision);\n  }\n\n  return `${formatSignificance(min, precision)}–${formatSignificance(\n    max,\n    precision,\n  )}`;\n}\n\nfunction formatSignificance(value, precision = null) {\n  // Format to preserve a reasonable number of significant figures\n  // this could be done with an easier algorithm, probably:\n\n  if (precision == null) {\n    return value.toLocaleString();\n  }\n  if (precision >= 0) {\n    return value.toFixed(precision);\n  }\n  if (precision < 0) {\n    return (\n      (value / Math.pow(10, -precision)).toFixed(0) + \"0\".repeat(-precision)\n    );\n  }\n}\n"],"names":[],"version":3,"file":"column-views.5eb4e6ff.js.map"}

package/dist/esm/column-views.6c9e5069.js.map

@@ -1 +0,0 @@
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This will\n  eventually be extended with first/last occurrence markers and range bars.\n   */\n  const data = useFossilData(columnID, FossilDataType.Occurrences);\n  const col = useMacrostratColumnData();\n  const scale = useCompositeScale();\n\n  if (data == null) return null;\n\n  const data1 = group(data, (d) => d.unit_id);\n\n  // convert the data to a map\n  const occurrenceMap = new Map(data1);\n\n  const matrix = createOccurrenceMatrix(col.units, occurrenceMap, col.axisType);\n\n  const { taxonRanges } = matrix;\n\n  const padding = 16;\n  const spacing = 16;\n\n  const taxonEntries = Array.from(taxonRanges.entries());\n  //const taxon = taxonEntries.slice(0, 50); // limit to top 50 taxa\n\n  const width = padding * 2 + spacing * taxonEntries.length;\n\n  return h(Box, { className: \"taxon-ranges\", width, height: col.totalHeight }, [\n    h(TaxonOccurrenceLabels, {\n      taxonEntries,\n      padding,\n      spacing,\n      scale,\n    }),\n    h(\n      ColumnSVG,\n      {\n        width: padding * 2 + spacing * taxonEntries.length,\n      },\n      h(\n        \"g.taxa-occurrences-matrix\",\n        taxonEntries.map(([taxonName, ranges], rowIndex) => {\n          const xPosition = padding + rowIndex * spacing;\n          return h(\"g\", { transform: `translate(${xPosition})` }, [\n            ranges.map(([top, bottom]) => {\n              return h(\"line\", {\n                y1: scale(top),\n                y2: scale(bottom),\n              });\n            }),\n          ]);\n        }),\n      ),\n    ),\n  ]);\n}\n\nfunction TaxonOccurrenceLabels({ taxonEntries, padding, spacing, scale }) {\n  return h(\"div.taxon-labels\", [\n    taxonEntries.map(([taxonName, ranges], rowIndex) => {\n      const top = ranges[0]?.[0] ?? 0;\n      let topPx = scale(top) - 20;\n      if (topPx < 200) topPx = 0;\n\n      return h(TaxonLabel, {\n        top: topPx,\n        left: padding + rowIndex * spacing,\n        taxonName,\n      });\n    }),\n  ]);\n}\n\nfunction TaxonLabel({ top, left, taxonName }) {\n  const ref = useRef();\n  const textSize = useElementSize(ref);\n  const labelWidth = textSize?.height ?? 200;\n  return h(\n    \"div.taxon-label\",\n    {\n      style: {\n        top: `${top}px`,\n        marginLeft: `${left}px`,\n        \"--label-width\": `${labelWidth}px`,\n      },\n    },\n    h(\"div.taxon-label-inner\", h(\"div.taxon-label-text\", { ref }, taxonName)),\n  );\n}\n\ntype TaxonUnitMap = Map<string, Set<number>>;\n\ninterface OccurrenceMatrixData {\n  occurrenceMap: Map<number, PBDBOccurrence[]>; // Map of unit IDs to occurrences (original data)\n  taxonUnitMap: TaxonUnitMap; // Map of taxon names to sets of unit IDs\n  taxonOccurrenceMap: Map<string, PBDBOccurrence[]>; // Map of taxon names to occurrences\n  taxonRanges: Map<string, [number, number][]>; // Map of taxon names to [top, bottom] pixel ranges\n}\n\nfunction TaxonOccurrenceEntry({\n  xPosition,\n  ranges,\n  scale,\n  name,\n}: {\n  xPosition: number;\n  units: Set<number>;\n}) {\n  return h(\"g\", { transform: `translate(${xPosition})` }, [\n    ranges.map(([top, bottom]) => {\n      return h(\"line\", {\n        y1: scale(top),\n        y2: scale(bottom),\n      });\n    }),\n  ]);\n}\n\nfunction createOccurrenceMatrix(\n  units: UnitLong[],\n  data: Map<number, PBDBOccurrence[]>,\n  axisType: ColumnAxisType = ColumnAxisType.AGE,\n): OccurrenceMatrixData {\n  const taxonUnitMap = new Map<string, Set<number>>();\n  const taxonOccurrenceMap = new Map<string, PBDBOccurrence[]>();\n\n  for (const [unit_id, occurrences] of data.entries()) {\n    for (const occ of occurrences) {\n      const taxonName = occ.best_name ?? occ.taxon_name;\n      if (!taxonUnitMap.has(taxonName)) {\n        taxonUnitMap.set(taxonName, new Set());\n        taxonOccurrenceMap.set(taxonName, []);\n      }\n      taxonUnitMap.get(taxonName).add(unit_id);\n      taxonOccurrenceMap.get(taxonName).push(occ);\n    }\n  }\n\n  // sort the taxon occurrence map by number of occurrences\n  const sortedTaxa = Array.from(taxonUnitMap.entries()).sort((a, b) => {\n    // Sort alphabetically by taxon name\n    return b[0].localeCompare(a[0]);\n  });\n\n  const taxonRanges = new Map<string, [number, number][]>();\n  for (const [taxonName, unitSet] of taxonUnitMap.entries()) {\n    taxonRanges.set(\n      taxonName,\n      accumulatePresenceDomains(units, unitSet, axisType),\n    );\n  }\n\n  return {\n    occurrenceMap: data,\n    taxonUnitMap: new Map(sortedTaxa),\n    taxonOccurrenceMap: taxonOccurrenceMap,\n    taxonRanges,\n  };\n}\n\nfunction accumulatePresenceDomains(\n  unit: UnitLong[],\n  presenceUnits: Set<number>,\n  axisType: ColumnAxisType,\n): Array<[number, number]> {\n  const domains: Array<[number, number]> = [];\n  let currentDomain: [number, number] | null = null;\n\n  for (const u of unit) {\n    if (presenceUnits.has(u.unit_id)) {\n      if (currentDomain == null) {\n        if (\n          axisType == ColumnAxisType.DEPTH ||\n          axisType == ColumnAxisType.HEIGHT\n        ) {\n          currentDomain = [u.t_pos, u.b_pos];\n        } else {\n          currentDomain = [u.t_age, u.b_age];\n        }\n      } else {\n        if (\n          axisType == ColumnAxisType.DEPTH ||\n          axisType == ColumnAxisType.HEIGHT\n        ) {\n          currentDomain[1] = u.b_pos;\n        } else {\n          currentDomain[1] = u.b_age;\n        }\n      }\n    } else {\n      if (currentDomain != null) {\n        domains.push(currentDomain);\n        currentDomain = null;\n      }\n    }\n  }\n\n  if (currentDomain != null) {\n    domains.push(currentDomain);\n  }\n\n  return domains;\n}\n"],"names":[],"version":3,"file":"column-views.6c9e5069.js.map"}

package/dist/esm/column-views.7fa0d026.js.map

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package/dist/esm/column-views.c3c7901a.js.map

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THis happens because matches to units might be at a lower rank (e.g, if the column\n   * contains Formations but the measurements are linked to a Group). 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package/dist/esm/column-views.de433f18.js.map

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hyper from \"@macrostrat/hyper\";\nimport styles from \"./base.module.sass\";\nimport { getPositionWithinUnit, getUnitHeightRange } from \"../../prepare-units\";\nimport { ColumnNotes } from \"../../notes\";\nimport { UnitLong } from \"@macrostrat/api-types\";\nimport { ColumnAxisType } from \"@macrostrat/column-components\";\nimport type { CompositeColumnScale } from \"../../units\";\nconst h = hyper.styled(styles);\n\ntype GetHeightRangeFn<T> = (\n  data: T,\n  unit: UnitLong | null,\n  axisType: ColumnAxisType,\n) => MeasurementHeightData;\n\nexport interface BaseMeasurementsColumnProps<T> {\n  data: T[];\n  noteComponent?: any;\n  width?: number;\n  paddingLeft?: number;\n  className?: string;\n  // TODO: these props are confusing\n  getUnitID?: (d: T) => number | string;\n  isMatchingUnit?: (d: T, unit: UnitLong) => boolean;\n  getHeightRange?: GetHeightRangeFn<T>;\n  deltaConnectorAttachment?: number;\n}\n\nexport interface ColumnMeasurementData<T = any> extends MeasurementHeightData {\n  data: T;\n  id: string | number;\n}\n\ntype MeasurementPositionInformation =\n  | MeasurementHeightData\n  | {\n      unit_id: number;\n      unit_rel_pos?: number;\n    };\n\nexport function standardizeMeasurementHeight(\n  pos: MeasurementPositionInformation,\n  units: UnitLong[],\n  axisType: ColumnAxisType,\n): MeasurementHeightData | null {\n  /** Get a standardized height representation from position information for\n   * a measurement\n   */\n  if (\"height\" in pos) {\n    return pos;\n  }\n  const unit = units.find((u) => u.unit_id === pos.unit_id);\n  if (unit == null) {\n    return null;\n  }\n  if (pos.unit_rel_pos != null) {\n    const res = getPositionWithinUnit(pos.unit_rel_pos, unit, axisType);\n    if (res == null) return null;\n    return { height: res };\n  } else {\n    const [height, top_height] = getUnitHeightRange(unit, axisType);\n    return { height, top_height };\n  }\n}\n\nexport function mergeHeightRanges(\n  data: 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BaseMeasurementsColumnProps<any>) {\n  if (data == null) return null;\n\n  return h(\n    \"div.measurements-column\",\n    { className },\n    h(ColumnNotes, {\n      width,\n      paddingLeft,\n      notes: data,\n      noteComponent,\n      deltaConnectorAttachment,\n      focusedNoteComponent,\n    }),\n  );\n}\n\ninterface TruncatedListProps {\n  data: any[];\n  className?: string;\n  maxItems?: number;\n  itemRenderer?: (props: { data: any }) => any;\n}\n\nexport function TruncatedList({\n  data,\n  className,\n  maxItems = 5,\n  itemRenderer = (p) => h(\"span\", p.data),\n}: TruncatedListProps) {\n  let tooMany = null;\n  let d1 = data;\n  if (data.length > maxItems) {\n    const n = data.length - maxItems;\n    d1 = data.slice(0, maxItems);\n    tooMany = h(\"li.too-many\", `and ${n} more`);\n  }\n\n  return h(\"ul.truncated-list\", { className }, [\n    d1.map((d, i) => {\n      return h(\"li.element\", { key: i }, h(itemRenderer, { data: d }));\n    }),\n    tooMany,\n  ]);\n}\n\nexport function groupNotesByPixelDistance<T = any>(\n  data: ColumnMeasurementData<T[]>[],\n  scale: CompositeColumnScale,\n  axisType: ColumnAxisType,\n  groupDistance: number,\n) {\n  /** Group notes that are within a certain pixel distance of each other\n   * in display space\n   */\n  if (data.length === 0 || groupDistance <= 0) return data;\n  if (axisType === ColumnAxisType.AGE || axisType === ColumnAxisType.DEPTH) {\n    data.sort((a, b) => b.height - a.height);\n  } else {\n    // Sort data by height (ascending up the column)\n    data.sort((a, b) => a.height - b.height);\n  }\n\n  const groupedData: ColumnMeasurementData<T[]>[] = [];\n  let currentGroup: ColumnMeasurementData<T[]> | null = null;\n  let currentGroupPosition: number = Infinity;\n\n  for (const d of data) {\n    // Check distance from current max position\n    // Pixels go up as we go down in the section\n\n    // The _top_ of the next group must be within groupDistance of the\n    // _bottom_ of the current group. This makes sure that we don't collapse\n    // groups that are separated by a large distance\n    const distance = currentGroupPosition - scale(d.top_height ?? d.height);\n\n    if (distance <= groupDistance) {\n      if (currentGroup == null) {\n        throw new Error(\"Current group is null when it shouldn't be\");\n      }\n      // Merge into current group\n      currentGroup.data.push(...d.data);\n      // Update height range\n      const top_height = d.top_height ?? d.height;\n      if (\n        axisType === ColumnAxisType.AGE ||\n        axisType === ColumnAxisType.DEPTH\n      ) {\n        // Inverted axis\n        currentGroup.top_height = Math.min(currentGroup.top_height, top_height);\n      } else {\n        currentGroup.top_height = Math.max(currentGroup.top_height, top_height);\n      }\n      currentGroup.key = `${currentGroup.height}-${currentGroup.top_height}`;\n    } else {\n      // Start a new group\n      currentGroup = { ...d, data: [...d.data] };\n      currentGroupPosition =\n        scale(currentGroup.height) ??\n        scale(currentGroup.top_height) ??\n        Infinity;\n      groupedData.push(currentGroup);\n    }\n  }\n\n  return groupedData;\n}\n"],"names":[],"version":3,"file":"column-views.de433f18.js.map"}

package/dist/node/column-views.28609db2.css

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package/dist/node/column-views.5361f0e2.js

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package/dist/node/column-views.5361f0e2.js.map

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a.default : a;\n}\n\nfunction $parcel$export(e, n, v, s) {\n  Object.defineProperty(e, n, {get: v, set: s, enumerable: true, configurable: true});\n}\n\n      var $parcel$global = globalThis;\n    \nvar $parcel$modules = {};\nvar $parcel$inits = {};\n\nvar parcelRequire = $parcel$global[\"parcelRequirea149\"];\n\nif (parcelRequire == null) {\n  parcelRequire = function(id) {\n    if (id in $parcel$modules) {\n      return $parcel$modules[id].exports;\n    }\n    if (id in $parcel$inits) {\n      var init = $parcel$inits[id];\n      delete $parcel$inits[id];\n      var module = {id: id, exports: {}};\n      $parcel$modules[id] = module;\n      init.call(module.exports, module, module.exports);\n      return module.exports;\n    }\n    var err = new Error(\"Cannot find module '\" + id + \"'\");\n    err.code = 'MODULE_NOT_FOUND';\n    throw err;\n  };\n\n  parcelRequire.register = function register(id, init) {\n    $parcel$inits[id] = init;\n  };\n\n  $parcel$global[\"parcelRequirea149\"] = parcelRequire;\n}\n\nvar parcelRegister = parcelRequire.register;\nvar $68f55e74a5c97233$exports = {};\n\n$parcel$export($68f55e74a5c97233$exports, \"DetritalColumn\", () => $68f55e74a5c97233$export$f176396e104db8d5);\n$parcel$export($68f55e74a5c97233$exports, \"DetritalGroup\", () => $68f55e74a5c97233$export$1b3047373cd1c8c7);\n\n\n\nvar $ehHhC = parcelRequire(\"ehHhC\");\n\n\nvar $jtfAP = parcelRequire(\"jtfAP\");\n\n\nvar $kIQUG = parcelRequire(\"kIQUG\");\n\n\nvar $wtIgl = parcelRequire(\"wtIgl\");\n\nvar $iWhRv = parcelRequire(\"iWhRv\");\nconst $68f55e74a5c97233$var$h = (0, $9VOFI$macrostrathyper).styled((0, (/*@__PURE__*/$parcel$interopDefault($jtfAP))));\nfunction $68f55e74a5c97233$var$prepareDetritalData(data, units, axisType) {\n    /** Right now measurement data could be duplicated if there are multiple units linked to the same\n   * measuremeta_id. THis happens because matches to units might be at a lower rank (e.g, if the column\n   * contains Formations but the measurements are linked to a Group). 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100;\n    const hideAxisLabels = spaceBelow < 60;\n    return $68f55e74a5c97233$var$h(\"div.detrital-group\", {\n        className: (0, $9VOFI$classnames)({\n            \"hide-axis\": hideAxisLabels\n        })\n    }, [\n        $68f55e74a5c97233$var$h((0, $9VOFI$DetritalSpectrumPlot), {\n            width: width,\n            innerHeight: height,\n            showAxisLabels: true,\n            paddingBottom: 40\n        }, [\n            units.map((unit)=>{\n                return $68f55e74a5c97233$var$h($68f55e74a5c97233$var$DepositionalAge, {\n                    unit: unit\n                });\n            }),\n            data.map((d)=>{\n                return $68f55e74a5c97233$var$h((0, $9VOFI$DetritalSeries), {\n                    bandwidth: 20,\n                    data: d.measure_value,\n                    color: _color\n                });\n            })\n        ])\n    ]);\n}\n\n\nexport {$68f55e74a5c97233$export$f176396e104db8d5 as DetritalColumn, $68f55e74a5c97233$export$1b3047373cd1c8c7 as DetritalGroup};\n//# sourceMappingURL=column-views.5361f0e2.js.map\n","import {\n  DetritalSpectrumPlot,\n  DetritalSeries,\n  usePlotArea,\n} from \"@macrostrat/data-components\";\nimport type { IUnit } from \"../../units/types\";\nimport hyper from \"@macrostrat/hyper\";\nimport { useDetritalMeasurements, MeasurementInfo } from \"./provider\";\nimport { useMemo } from \"react\";\nimport styles from \"./index.module.sass\";\nimport classNames from \"classnames\";\nimport {\n  BaseMeasurementsColumn,\n  mergeHeightRanges,\n  ColumnMeasurementData,\n} from \"../measurements\";\nimport { group } from \"d3-array\";\nimport { ColumnAxisType } from \"@macrostrat/column-components\";\nimport { useMacrostratColumnData } from \"../../data-provider\";\nimport { getUnitHeightRange } from \"../../prepare-units\";\n\nconst h = hyper.styled(styles);\n\ninterface DetritalItemProps {\n  note: DZMeasurementInfo;\n  spacing?: {\n    below?: number;\n    above?: number;\n  };\n  width?: number;\n  height?: number;\n  color?: string;\n}\n\ninterface DZMeasurementInfo extends ColumnMeasurementData<MeasurementInfo[]> {\n  units: IUnit[];\n}\n\nfunction prepareDetritalData(\n  data: MeasurementInfo[],\n  units: IUnit[],\n  axisType: ColumnAxisType,\n) {\n  /** Right now measurement data could be duplicated if there are multiple units linked to the same\n   * measuremeta_id. THis happens because matches to units might be at a lower rank (e.g, if the column\n   * contains Formations but the measurements are linked to a Group). To handle this, we group by measuremeta_id\n   * and then create unique keys based on the set of units linked to each measurement.\n   */\n\n  // Group data by measuremeta_id\n  const measurementsGrouped = group(data, (d) => d.measuremeta_id);\n\n  const resMap = new Map<string, DZMeasurementInfo>();\n\n  for (const measurements of measurementsGrouped.values()) {\n    // Get a list of unique unit_ids for this measurement\n    const unitIDs = new Set(measurements.map((m) => m.unit_id));\n    const ids = Array.from(unitIDs);\n    ids.sort();\n    // Key is unique to the set of units\n    const key = ids.join(\"-\");\n\n    if (!resMap.has(key)) {\n      const unitData = ids\n        .map((id) => {\n          return units.find((u) => u.unit_id === id);\n        })\n        .filter(Boolean);\n\n      const positions = unitData.map((unit) => {\n        const [height, top_height] = getUnitHeightRange(unit, axisType);\n        return { height, top_height };\n      });\n\n      // merge positions (note: we could also have multiple separate notes per measurement)\n      const pos = mergeHeightRanges(positions, axisType);\n\n      resMap.set(key, {\n        id: key,\n        data: [],\n        units: unitData as IUnit[],\n        ...pos,\n      });\n    }\n    resMap.get(key)!.data.push(measurements[0]);\n  }\n\n  return Array.from(resMap.values());\n}\n\nfunction DetritalColumn({ columnID, color = \"magenta\" }) {\n  const data = useDetritalMeasurements({ col_id: columnID });\n\n  const width = 400;\n  const paddingLeft = 40;\n\n  const spectrumWidth = width - paddingLeft;\n\n  const noteComponent = useMemo(() => {\n    return (props) => {\n      return h(DetritalGroup, {\n        width: spectrumWidth,\n        height: 40,\n        color,\n        ...props,\n      });\n    };\n  }, [width, color]);\n\n  const { axisType, units } = useMacrostratColumnData();\n\n  const data1 = useMemo(() => {\n    if (data == null || units == null) return null;\n    return prepareDetritalData(data, units, axisType);\n  }, [data, units, axisType]);\n\n  return h(BaseMeasurementsColumn, {\n    data: data1,\n    noteComponent,\n    deltaConnectorAttachment: 20,\n  });\n}\n\nfunction DepositionalAge({ unit }) {\n  const { xScale, height } = usePlotArea();\n\n  const { t_age, b_age } = unit;\n  const x = xScale(t_age);\n  const x1 = xScale(b_age);\n\n  return h(\"rect.depositional-age\", { x, width: x1 - x, y: 0, height });\n}\n\nfunction DetritalGroup(props: DetritalItemProps) {\n  const { note, width, height, color, spacing } = props;\n  const { data, units } = note;\n\n  const _color = color;\n\n  const spaceBelow = spacing?.below ?? 100;\n  const hideAxisLabels = spaceBelow < 60;\n\n  return h(\n    \"div.detrital-group\",\n    { className: classNames({ \"hide-axis\": hideAxisLabels }) },\n    [\n      h(\n        DetritalSpectrumPlot,\n        { width, innerHeight: height, showAxisLabels: true, paddingBottom: 40 },\n        [\n          units.map((unit) => {\n            return h(DepositionalAge, { unit });\n          }),\n          data.map((d) => {\n            return h(DetritalSeries, {\n              bandwidth: 20,\n              data: d.measure_value,\n              color: _color,\n            });\n          }),\n        ],\n      ),\n    ],\n  );\n}\n\nexport { DetritalColumn, DetritalGroup };\n"],"names":["usePlotArea","$9VOFI$usePlotArea","DetritalSpectrumPlot","$9VOFI$DetritalSpectrumPlot","DetritalSeries","$9VOFI$DetritalSeries","$9VOFI$macrostrathyper","useMemo","$9VOFI$useMemo","$9VOFI$classnames","group","$9VOFI$group","$parcel$export","e","n","v","s","Object","defineProperty","get","set","enumerable","configurable","$parcel$global","globalThis","$parcel$modules","$parcel$inits","parcelRequire","id","exports","init","module","call","err","Error","code","register","$68f55e74a5c97233$exports","$68f55e74a5c97233$export$f176396e104db8d5","$68f55e74a5c97233$export$1b3047373cd1c8c7","$ehHhC","$jtfAP","$kIQUG","$wtIgl","$iWhRv","$68f55e74a5c97233$var$h","styled","a","__esModule","default","columnID","color","data","useDetritalMeasurements","col_id","noteComponent","props","width","height","axisType","units","useMacrostratColumnData","data1","$68f55e74a5c97233$var$prepareDetritalData","measurementsGrouped","d","measuremeta_id","resMap","Map","measurements","values","ids","Array","from","Set","map","m","unit_id","sort","key","join","has","unitData","find","u","filter","Boolean","positions","unit","top_height","getUnitHeightRange","pos","mergeHeightRanges","push","BaseMeasurementsColumn","deltaConnectorAttachment","$68f55e74a5c97233$var$DepositionalAge","xScale","t_age","b_age","x","x1","y","note","spacing","className","spaceBelow","below","innerHeight","showAxisLabels","paddingBottom","bandwidth","measure_value","DetritalColumn","DetritalGroup"],"version":3,"file":"column-views.5361f0e2.js.map","sourceRoot":"../../../../"}

package/dist/node/column-views.777b9bb6.js

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-//# sourceMappingURL=column-views.777b9bb6.js.map

package/dist/node/column-views.777b9bb6.js.map

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package/dist/node/column-views.93bde6c1.js

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-//# sourceMappingURL=column-views.93bde6c1.js.map

package/dist/node/column-views.93bde6c1.js.map

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scale(d.height));\n        return dy > minimumHeight;\n    }, [\n        scale,\n        minimumHeight\n    ]);\n    if (divisions == null) return null;\n    const notes = divisions.filter(shouldRenderNote).map((d)=>$e80be54614c93c14$export$2f2e65a797f8fc1e(d, {\n            axisType: axisType\n        })).filter(minimumHeightFilter);\n    return (0, $eWQbS$macrostrathyper)((0, $eWQbS$NotesColumn), {\n        transform: `translate(${left})`,\n        editable: false,\n        noteComponent: noteComponent,\n        notes: notes,\n        forceOptions: {\n            nodeSpacing: 1\n        },\n        ...rest\n    });\n}\nconst $e80be54614c93c14$export$6316e673796ccb55 = (0, $eWQbS$react).memo($e80be54614c93c14$var$UnitDataColumn_);\nfunction $e80be54614c93c14$export$594d19cdd88f8c16(props) {\n    const { nameForDivision: nameForDivision = $e80be54614c93c14$export$c9757aeb43a67df0, noteComponent: noteComponent, ...rest } = props;\n    const defaultNoteComponent = (0, $eWQbS$useMemo)(()=>(props)=>{\n            const { note: note } = props;\n            return (0, $eWQbS$macrostrathyper)(\"p.col-note-label\", nameForDivision(note.data));\n        }, [\n        nameForDivision\n    ]);\n    return (0, $eWQbS$macrostrathyper)($e80be54614c93c14$export$6316e673796ccb55, {\n        noteComponent: noteComponent ?? defaultNoteComponent,\n        ...rest\n    });\n}\n\n\nexport {$e80be54614c93c14$export$2f2e65a797f8fc1e as noteForDivision, $e80be54614c93c14$export$c9757aeb43a67df0 as defaultNameFunction, $e80be54614c93c14$export$6316e673796ccb55 as UnitDataColumn, $e80be54614c93c14$export$594d19cdd88f8c16 as UnitNamesColumn};\n//# sourceMappingURL=column-views.93bde6c1.js.map\n","import h from \"@macrostrat/hyper\";\nimport { useCallback, useMemo } from \"react\";\nimport {\n  ColumnAxisType,\n  NotesColumn,\n  NotesColumnProps,\n} from \"@macrostrat/column-components\";\nimport type { ColumnDivision } from \"@macrostrat/column-components\";\nimport { IUnit } from \"./types\";\nimport React from \"react\";\nimport { getUnitHeightRange } from \"../prepare-units/utils\";\nimport { CompositeColumnScale } from \"./composite\";\nimport { useCompositeScale, useMacrostratColumnData } from \"../data-provider\";\n\ninterface UnitDataProps extends NotesColumnProps {\n  left?: number;\n  transform?: string;\n  noteComponent?: React.ComponentType<any>;\n  shouldRenderNote?(div: ColumnDivision | IUnit, index: number): boolean;\n  divisions?: IUnit[];\n  minimumHeight?: number;\n  scale?: CompositeColumnScale;\n}\n\ntype UnitNote = {\n  height: number;\n  top_height: number;\n  data: IUnit;\n  id: number;\n};\n\nfunction noteForDivision(\n  div: IUnit,\n  opts: { axisType: ColumnAxisType },\n): UnitNote {\n  const { axisType } = opts;\n\n  const [height, top_height] = getUnitHeightRange(div, axisType);\n\n  return {\n    height,\n    top_height,\n    data: div,\n    id: div.unit_id,\n  };\n}\n\nconst defaultNameFunction = (div) => {\n  return div.unit_name\n    .replace(\"Mbr\", \"Member\")\n    .replace(\"Fm\", \"Formation\")\n    .replace(\"Gp\", \"Group\");\n};\n\nfunction UnitDataColumn_(props: UnitDataProps) {\n  const { axisType, units } = useMacrostratColumnData();\n  const scale = useCompositeScale();\n  const {\n    left = 0,\n    noteComponent,\n    shouldRenderNote = (note: ColumnDivision | IUnit, i: number) => true,\n    minimumHeight = 0,\n    divisions = units,\n    ...rest\n  } = props;\n\n  const minimumHeightFilter = useCallback(\n    (d) => {\n      if (minimumHeight == 0) return true;\n      const dy = Math.abs(scale(d.top_height) - scale(d.height));\n      return dy > minimumHeight;\n    },\n    [scale, minimumHeight],\n  );\n\n  if (divisions == null) return null;\n  const notes: UnitNote[] = divisions\n    .filter(shouldRenderNote)\n    .map((d: IUnit) => noteForDivision(d, { axisType }))\n    .filter(minimumHeightFilter);\n\n  return h(NotesColumn, {\n    transform: `translate(${left})`,\n    editable: false,\n    noteComponent,\n    notes,\n    forceOptions: {\n      nodeSpacing: 1,\n    },\n    ...rest,\n  });\n}\n\nconst UnitDataColumn = React.memo(UnitDataColumn_);\n\ninterface UnitNamesProps extends UnitDataProps {\n  nameForDivision?(obj: IUnit): string;\n  paddingLeft?: number;\n  width: number;\n  onClickNote?: (note: any) => void;\n}\n\nexport function UnitNamesColumn(props: UnitNamesProps) {\n  const {\n    nameForDivision = defaultNameFunction,\n    noteComponent,\n    ...rest\n  } = props;\n\n  const defaultNoteComponent = useMemo(\n    () => (props) => {\n      const { note } = props;\n      return h(\"p.col-note-label\", nameForDivision(note.data));\n    },\n    [nameForDivision],\n  );\n\n  return h(UnitDataColumn, {\n    noteComponent: noteComponent ?? defaultNoteComponent,\n    ...rest,\n  });\n}\n\nexport type { UnitNamesProps };\nexport { defaultNameFunction, noteForDivision, UnitDataColumn };\n"],"names":["$eWQbS$macrostrathyper","$eWQbS$react","useCallback","$eWQbS$useCallback","useMemo","$eWQbS$useMemo","NotesColumn","$eWQbS$NotesColumn","$parcel$global","globalThis","$parcel$modules","$parcel$inits","parcelRequire","id","exports","init","module","call","err","Error","code","register","$iWhRv","$wtIgl","$e80be54614c93c14$export$2f2e65a797f8fc1e","div","opts","axisType","height","top_height","getUnitHeightRange","data","unit_id","$e80be54614c93c14$export$c9757aeb43a67df0","unit_name","replace","$e80be54614c93c14$export$6316e673796ccb55","memo","props","units","useMacrostratColumnData","scale","useCompositeScale","left","noteComponent","shouldRenderNote","note","i","minimumHeight","divisions","rest","minimumHeightFilter","d","dy","Math","abs","transform","editable","notes","filter","map","forceOptions","nodeSpacing","$e80be54614c93c14$export$594d19cdd88f8c16","nameForDivision","defaultNoteComponent","noteForDivision","defaultNameFunction","UnitDataColumn","UnitNamesColumn"],"version":3,"file":"column-views.93bde6c1.js.map","sourceRoot":"../../../../"}

package/dist/node/column-views.af480651.js

@@ -1,2 +0,0 @@
-import"./column-views.fac4baff.js";import"./column-views.1d064426.js";import"./column-views.46efb749.js";import"./column-views.672b683c.js";import"./column-views.dbb4a46b.js";import"./column-views.b6e86cf0.js";import e from"@macrostrat/hyper";import{ColumnAxisType as t}from"@macrostrat/column-components";import{scaleLinear as n}from"d3-scale";function o(e,t,n,o){Object.defineProperty(e,t,{get:n,set:o,enumerable:!0,configurable:!0})}var l=globalThis,a={},r={},i=l.parcelRequirea149;null==i&&((i=function(e){if(e in a)return a[e].exports;if(e in r){var t=r[e];delete r[e];var n={id:e,exports:{}};return a[e]=n,t.call(n.exports,n,n.exports),n.exports}var o=Error("Cannot find module '"+e+"'");throw o.code="MODULE_NOT_FOUND",o}).register=function(e,t){r[e]=t},l.parcelRequirea149=i),i.register;var s={};o(s,"PBDBFossilsColumn",()=>b),o(s,"FossilDataType",()=>i("dx7no").FossilDataType);var u=i("dx7no"),c=i("kIQUG"),f=i("wtIgl"),m=i("f7qDU"),p=i("iWhRv"),d=i("6dOaS");let _=e.styled(m&&m.__esModule?m.default:m);function b({columnID:e,type:o=u.FossilDataType.Collections}){let l=(0,u.useFossilData)(e,o),{axisType:a,units:r}=(0,f.useMacrostratColumnData)(),i=(0,f.useCompositeScale)();if(null==l||null==r||null==i)return null;let s=function(e,o,l,a,r){let{groupCloseNotes:i=!0}=(void 0)??{},s=new Map;for(let l of e){let e=function(e,o,l){let a=null;if(null!=e.slb&&"mbsf"==e.slu&&(a=Number(e.slb),l===t.DEPTH))return{height:a};if(null==e.unit_id)return null;if(null!=a){let r=o.find(t=>t.unit_id===e.unit_id);if(null==r)return null;let i=function(e,t,o){let l=n((0,p.getUnitHeightRange)(t,o,!1)).domain([0,1]).invert(e);return l<0||l>1?null:l}(a,r,t.DEPTH);return null==i?null:{height:a=(0,p.getPositionWithinUnit)(i,r,l)}}return(0,c.standardizeMeasurementHeight)({unit_id:e.unit_id},o,l)}(l,o,a);if(null==e)continue;let{height:r,top_height:i}=e,u=`${r}`;null!=i&&(u+=`-${i}`),s.has(u)||s.set(u,{height:r,top_height:i??r,data:[],id:u}),s.get(u).data.push(l)}return(0,c.groupNotesByPixelDistance)(Array.from(s.values()),l,a,"number"==typeof i?i:10)}(l,r,i,a);return _(c.BaseMeasurementsColumn,{data:s,noteComponent:h,focusedNoteComponent:h,className:"fossil-collections"})}function h(e){let{note:t,maxItems:n,focused:o=!1}=e,{data:l}=t;return l.sort((e,t)=>{let n=e.best_name??e.cltn_name??"",o=t.best_name??t.cltn_name??"";return n.localeCompare(o)}),_(c.TruncatedList,{data:l,className:"fossil-collections",itemRenderer:g,maxItems:o?1/0:n??5})}function g({data:e}){return _("a.link-id",{href:`https://paleobiodb.org/app/collections#display=col:${e.cltn_id}`,target:"_blank",onClick(e){e.stopPropagation()}},e.best_name??e.cltn_name)}Object.keys(d).forEach(function(e){"default"===e||"__esModule"===e||Object.prototype.hasOwnProperty.call(s,e)||Object.defineProperty(s,e,{enumerable:!0,get:function(){return d[e]}})});export{b as PBDBFossilsColumn,$8e174c7ae24a4598$export$a990c76b38782f57 as FossilDataType,$8e174c7ae24a4598$export$a990c76b38782f57 as FossilDataType,$9cea14fa75e12a56$export$652730986cccff7a as PBDBOccurrencesMatrix};
-//# sourceMappingURL=column-views.af480651.js.map

package/dist/node/column-views.af480651.js.map

@@ -1 +0,0 @@
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a.cltn_name ?? \"\";\n        const nameB = b.best_name ?? b.cltn_name ?? \"\";\n        return nameA.localeCompare(nameB);\n    });\n    return $ea2f112131e22f14$var$h((0, $kIQUG.TruncatedList), {\n        data: data,\n        className: \"fossil-collections\",\n        itemRenderer: $ea2f112131e22f14$var$PBDBCollectionLink,\n        maxItems: focused ? Infinity : maxItems ?? 5\n    });\n}\nconst $ea2f112131e22f14$var$FocusedFossilInfo = (props)=>$ea2f112131e22f14$var$h($ea2f112131e22f14$var$FossilInfo, {\n        ...props,\n        maxItems: Infinity\n    });\nfunction $ea2f112131e22f14$var$PBDBCollectionLink({ data: data }) {\n    /** A link to a PBDB collection that handles either an occurrence or collection object */ return $ea2f112131e22f14$var$h(\"a.link-id\", {\n        href: `https://paleobiodb.org/app/collections#display=col:${data.cltn_id}`,\n        target: \"_blank\",\n        onClick (e) {\n            e.stopPropagation();\n        }\n    }, data.best_name ?? data.cltn_name);\n}\nfunction $ea2f112131e22f14$var$preparePBDBData(data, units, scale, axisType, options) {\n    /** Prepare PBDB fossil data for display in a measurements column */ const { groupCloseNotes: groupCloseNotes = true } = options ?? {};\n    const groupDistance = typeof groupCloseNotes === \"number\" ? groupCloseNotes : 10;\n    // Map of data to its defined height ranges\n    const dataMap = new Map();\n    // Todo: if we wanted, we could add a step where we group notes that are too close together here...\n    for (const d of data){\n        const range = $ea2f112131e22f14$var$getHeightRangeForPBDBEntity(d, units, axisType);\n        if (range == null) continue;\n        const { height: height, top_height: top_height } = range;\n        // compose the key based on height info\n        let key = `${height}`;\n        if (top_height != null) key += `-${top_height}`;\n        // Group by height key\n        if (!dataMap.has(key)) dataMap.set(key, {\n            height: height,\n            top_height: top_height ?? height,\n            data: [],\n            id: key\n        });\n        dataMap.get(key).data.push(d);\n    }\n    return (0, $kIQUG.groupNotesByPixelDistance)(Array.from(dataMap.values()), scale, axisType, groupDistance);\n}\nfunction $ea2f112131e22f14$var$getHeightRangeForPBDBEntity(d, units, axisType) {\n    let height = null;\n    if (d.slb != null && d.slu == \"mbsf\") {\n        // Meters below sea floor - special case for eODP where we have\n        // specific depth data referenced\n        height = Number(d.slb);\n        if (axisType === (0, $2jHE4$ColumnAxisType).DEPTH) // Data is already in depth units\n        return {\n            height: height\n        };\n    }\n    if (d.unit_id == null) return null;\n    if (height != null) {\n        // If we have both height and unit info, we need to adjust the height\n        // to fit whatever scale type we're using.\n        // TODO: we could improve how this works by having concurrent age and\n        // height scales, which would allow us to do this without having to\n        // reference to a specific unit.\n        const unit = units.find((u)=>u.unit_id === d.unit_id);\n        if (unit == null) return null;\n        const relHeight = $ea2f112131e22f14$var$getRelativePositionInUnit(height, unit, (0, $2jHE4$ColumnAxisType).DEPTH);\n        if (relHeight == null) return null;\n        height = (0, $iWhRv.getPositionWithinUnit)(relHeight, unit, axisType);\n        return {\n            height: height\n        };\n    }\n    // We can just get the height within the unit, clipped to the unit boundaries\n    return (0, $kIQUG.standardizeMeasurementHeight)({\n        unit_id: d.unit_id\n    }, units, axisType);\n}\nfunction $ea2f112131e22f14$var$getRelativePositionInUnit(pos, unit, axisType) {\n    // This is the inverse of getPositionWithinUnit\n    const heights = (0, $iWhRv.getUnitHeightRange)(unit, axisType, false);\n    const scale = (0, $2jHE4$scaleLinear)(heights).domain([\n        0,\n        1\n    ]);\n    const relPos = scale.invert(pos);\n    if (relPos < 0 || relPos > 1) return null;\n    return relPos;\n}\n$parcel$exportWildcard($ea2f112131e22f14$exports, $6dOaS);\n\n\nexport {$ea2f112131e22f14$export$554267114407ef68 as PBDBFossilsColumn, $8e174c7ae24a4598$export$a990c76b38782f57 as FossilDataType, $8e174c7ae24a4598$export$a990c76b38782f57 as FossilDataType, $9cea14fa75e12a56$export$652730986cccff7a as PBDBOccurrencesMatrix};\n//# sourceMappingURL=column-views.af480651.js.map\n","import hyper from \"@macrostrat/hyper\";\nimport {\n  FossilDataType,\n  PBDBCollection,\n  PBDBEntity,\n  PBDBOccurrence,\n  useFossilData,\n} from \"./provider\";\nimport type { CompositeColumnScale, IUnit } from \"../../units\";\nimport {\n  BaseMeasurementsColumn,\n  ColumnMeasurementData,\n  MeasurementHeightData,\n  standardizeMeasurementHeight,\n  groupNotesByPixelDistance,\n  TruncatedList,\n} from \"../measurements\";\nimport { ColumnAxisType } from \"@macrostrat/column-components\";\nimport {\n  useCompositeScale,\n  useMacrostratColumnData,\n} from \"../../data-provider\";\nimport { UnitLong } from \"@macrostrat/api-types\";\nimport styles from \"./taxon-ranges.module.sass\";\nimport { getPositionWithinUnit, getUnitHeightRange } from \"../../prepare-units\";\nimport { scaleLinear } from \"d3-scale\";\n\nexport * from \"./taxon-ranges\";\n\nconst h = hyper.styled(styles);\n\nexport { FossilDataType };\n\nexport function PBDBFossilsColumn({\n  columnID,\n  type = FossilDataType.Collections,\n}: {\n  columnID: number;\n  type: FossilDataType;\n}) {\n  const data = useFossilData(columnID, type);\n  const { axisType, units } = useMacrostratColumnData();\n  const scale = useCompositeScale();\n\n  if (data == null || units == null || scale == null) return null;\n\n  const data1 = preparePBDBData(data, units, scale, axisType);\n\n  return h(BaseMeasurementsColumn, {\n    data: data1,\n    noteComponent: FossilInfo,\n    focusedNoteComponent: FossilInfo,\n    className: \"fossil-collections\",\n  });\n}\n\ninterface FossilItemProps {\n  note: {\n    data: PBDBCollection[];\n    unit?: IUnit;\n  };\n  spacing?: {\n    below?: number;\n    above?: number;\n  };\n  width?: number;\n  height?: number;\n  color?: string;\n  focused?: boolean;\n}\n\nfunction FossilInfo(props: FossilItemProps) {\n  const { note, maxItems, focused = false } = props;\n  const { data } = note;\n  // Sort collections by name\n  data.sort((a, b) => {\n    const nameA = a.best_name ?? a.cltn_name ?? \"\";\n    const nameB = b.best_name ?? b.cltn_name ?? \"\";\n    return nameA.localeCompare(nameB);\n  });\n\n  return h(TruncatedList, {\n    data,\n    className: \"fossil-collections\",\n    itemRenderer: PBDBCollectionLink,\n    maxItems: focused ? Infinity : (maxItems ?? 5),\n  });\n}\n\nconst FocusedFossilInfo = (props: FossilItemProps) =>\n  h(FossilInfo, { ...props, maxItems: Infinity });\n\nfunction PBDBCollectionLink({\n  data,\n}: {\n  data: PBDBCollection | PBDBOccurrence;\n}) {\n  /** A link to a PBDB collection that handles either an occurrence or collection object */\n  return h(\n    \"a.link-id\",\n    {\n      href: `https://paleobiodb.org/app/collections#display=col:${data.cltn_id}`,\n      target: \"_blank\",\n      onClick(e) {\n        e.stopPropagation();\n      },\n    },\n    data.best_name ?? data.cltn_name,\n  );\n}\n\ninterface PreparePBDBDataOptions {\n  /** If set, group close notes within this distance (in pixels in display space)\n   * into a single note. If a number is provided, that number is used as the distance,\n   * otherwise a default of 5 pixels is used.\n   */\n  groupCloseNotes?: boolean | number;\n}\n\nfunction preparePBDBData<T extends PBDBEntity>(\n  data: T[],\n  units: UnitLong[],\n  scale: CompositeColumnScale,\n  axisType: ColumnAxisType,\n  options?: { groupCloseNotes?: boolean | number },\n) {\n  /** Prepare PBDB fossil data for display in a measurements column */\n  const { groupCloseNotes = true } = options ?? {};\n  const groupDistance =\n    typeof groupCloseNotes === \"number\" ? groupCloseNotes : 10;\n\n  // Map of data to its defined height ranges\n  const dataMap = new Map<string, ColumnMeasurementData<T[]>>();\n\n  // Todo: if we wanted, we could add a step where we group notes that are too close together here...\n\n  for (const d of data) {\n    const range = getHeightRangeForPBDBEntity(d, units, axisType);\n\n    if (range == null) continue;\n    const { height, top_height } = range;\n    // compose the key based on height info\n    let key = `${height}`;\n    if (top_height != null) {\n      key += `-${top_height}`;\n    }\n\n    // Group by height key\n    if (!dataMap.has(key)) {\n      dataMap.set(key, {\n        height,\n        top_height: top_height ?? height,\n        data: [],\n        id: key,\n      });\n    }\n    dataMap.get(key)!.data.push(d);\n  }\n\n  return groupNotesByPixelDistance(\n    Array.from(dataMap.values()),\n    scale,\n    axisType,\n    groupDistance,\n  );\n}\n\nfunction getHeightRangeForPBDBEntity<T extends PBDBEntity>(\n  d: T,\n  units: UnitLong[],\n  axisType: ColumnAxisType,\n): MeasurementHeightData | null {\n  let height: number | null = null;\n  if (d.slb != null && d.slu == \"mbsf\") {\n    // Meters below sea floor - special case for eODP where we have\n    // specific depth data referenced\n    height = Number(d.slb);\n    if (axisType === ColumnAxisType.DEPTH) {\n      // Data is already in depth units\n      return { height };\n    }\n  }\n  if (d.unit_id == null) return null;\n  if (height != null) {\n    // If we have both height and unit info, we need to adjust the height\n    // to fit whatever scale type we're using.\n    // TODO: we could improve how this works by having concurrent age and\n    // height scales, which would allow us to do this without having to\n    // reference to a specific unit.\n    const unit = units.find((u) => u.unit_id === d.unit_id);\n    if (unit == null) return null;\n    const relHeight = getRelativePositionInUnit(\n      height,\n      unit,\n      ColumnAxisType.DEPTH,\n    );\n    if (relHeight == null) return null;\n    height = getPositionWithinUnit(relHeight, unit, axisType);\n    return { height };\n  }\n  // We can just get the height within the unit, clipped to the unit boundaries\n  return standardizeMeasurementHeight({ unit_id: d.unit_id }, units, axisType);\n}\n\nfunction getRelativePositionInUnit<T extends PBDBEntity>(\n  pos: number,\n  unit: UnitLong,\n  axisType: ColumnAxisType,\n): number | null {\n  // This is the inverse of getPositionWithinUnit\n  const heights = getUnitHeightRange(unit, axisType, false);\n  const scale = scaleLinear(heights).domain([0, 1]);\n  const relPos = scale.invert(pos);\n  if (relPos < 0 || relPos > 1) return null;\n  return relPos;\n}\n"],"names":["$2jHE4$macrostrathyper","ColumnAxisType","$2jHE4$ColumnAxisType","scaleLinear","$2jHE4$scaleLinear","$parcel$export","e","n","v","s","Object","defineProperty","get","set","enumerable","configurable","$parcel$global","globalThis","$parcel$modules","$parcel$inits","parcelRequire","id","exports","init","module","call","err","Error","code","register","$ea2f112131e22f14$exports","$ea2f112131e22f14$export$554267114407ef68","FossilDataType","$dx7no","$kIQUG","$wtIgl","$f7qDU","$iWhRv","$6dOaS","$ea2f112131e22f14$var$h","styled","a","__esModule","default","columnID","type","Collections","data","useFossilData","axisType","units","useMacrostratColumnData","scale","useCompositeScale","data1","$ea2f112131e22f14$var$preparePBDBData","options","groupCloseNotes","dataMap","Map","d","range","$ea2f112131e22f14$var$getHeightRangeForPBDBEntity","height","slb","slu","Number","DEPTH","unit_id","unit","find","u","relHeight","$ea2f112131e22f14$var$getRelativePositionInUnit","pos","relPos","getUnitHeightRange","domain","invert","getPositionWithinUnit","standardizeMeasurementHeight","top_height","key","has","push","groupNotesByPixelDistance","Array","from","values","BaseMeasurementsColumn","noteComponent","$ea2f112131e22f14$var$FossilInfo","focusedNoteComponent","className","props","note","maxItems","focused","sort","b","nameA","best_name","cltn_name","nameB","localeCompare","TruncatedList","itemRenderer","$ea2f112131e22f14$var$PBDBCollectionLink","Infinity","href","cltn_id","target","onClick","stopPropagation","keys","forEach","prototype","hasOwnProperty","source","PBDBFossilsColumn","$8e174c7ae24a4598$export$a990c76b38782f57","$9cea14fa75e12a56$export$652730986cccff7a","PBDBOccurrencesMatrix"],"version":3,"file":"column-views.af480651.js.map","sourceRoot":"../../../../"}

package/dist/node/column-views.b6e86cf0.js

@@ -1,2 +0,0 @@
-import"./column-views.fac4baff.js";import"./column-views.46efb749.js";import"./column-views.672b683c.js";import e from"@macrostrat/hyper";import{Box as t,useElementSize as a}from"@macrostrat/ui-components";import{group as r}from"d3-array";import{ColumnSVG as n,ColumnAxisType as o}from"@macrostrat/column-components";import{useRef as s}from"react";function l(e,t,a,r){Object.defineProperty(e,t,{get:a,set:r,enumerable:!0,configurable:!0})}var i=globalThis,c={},u={},p=i.parcelRequirea149;null==p&&((p=function(e){if(e in c)return c[e].exports;if(e in u){var t=u[e];delete u[e];var a={id:e,exports:{}};return c[e]=a,t.call(a.exports,a,a.exports),a.exports}var r=Error("Cannot find module '"+e+"'");throw r.code="MODULE_NOT_FOUND",r}).register=function(e,t){u[e]=t},i.parcelRequirea149=p),p.register;var f={};l(f,"PBDBOccurrencesMatrix",()=>_),l(f,"FossilDataType",()=>p("dx7no").FossilDataType);var m=p("dx7no"),x=p("wtIgl"),d=p("f7qDU");let g=e.styled(d&&d.__esModule?d.default:d);function _({columnID:e}){let a=(0,m.useFossilData)(e,m.FossilDataType.Occurrences),s=(0,x.useMacrostratColumnData)(),l=(0,x.useCompositeScale)();if(null==a)return null;let i=new Map(r(a,e=>e.unit_id)),{taxonRanges:c}=function(e,t,a=o.AGE){let r=new Map,n=new Map;for(let[e,a]of t.entries())for(let t of a){let a=t.best_name??t.taxon_name;r.has(a)||(r.set(a,new Set),n.set(a,[])),r.get(a).add(e),n.get(a).push(t)}let s=Array.from(r.entries()).sort((e,t)=>t[0].localeCompare(e[0])),l=new Map;for(let[t,n]of r.entries())l.set(t,function(e,t,a){let r=[],n=null;for(let s of e)t.has(s.unit_id)?null==n?n=a==o.DEPTH||a==o.HEIGHT?[s.t_pos,s.b_pos]:[s.t_age,s.b_age]:a==o.DEPTH||a==o.HEIGHT?n[1]=s.b_pos:n[1]=s.b_age:null!=n&&(r.push(n),n=null);return null!=n&&r.push(n),r}(e,n,a));return{occurrenceMap:t,taxonUnitMap:new Map(s),taxonOccurrenceMap:n,taxonRanges:l}}(s.units,i,s.axisType),u=Array.from(c.entries());return g(t,{className:"taxon-ranges",width:32+16*u.length,height:s.totalHeight},[g(b,{taxonEntries:u,padding:16,spacing:16,scale:l}),g(n,{width:32+16*u.length},g("g.taxa-occurrences-matrix",u.map(([e,t],a)=>g("g",{transform:`translate(${16+16*a})`},[t.map(([e,t])=>g("line",{y1:l(e),y2:l(t)}))]))))])}function b({taxonEntries:e,padding:t,spacing:a,scale:r}){return g("div.taxon-labels",[e.map(([e,n],o)=>{let s=r(n[0]?.[0]??0)-20;return s<200&&(s=0),g(h,{top:s,left:t+o*a,taxonName:e})})])}function h({top:e,left:t,taxonName:r}){let n=s(),o=a(n),l=o?.height??200;return g("div.taxon-label",{style:{top:`${e}px`,marginLeft:`${t}px`,"--label-width":`${l}px`}},g("div.taxon-label-inner",g("div.taxon-label-text",{ref:n},r)))}export{_ as PBDBOccurrencesMatrix,$8e174c7ae24a4598$export$a990c76b38782f57 as FossilDataType};
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