@lix-js/sdk 0.5.0-preview.1 → 0.5.0

package/dist/change-proposal/create-change-proposal.test.js

@@ -1,91 +1,70 @@
-import { test, expect } from "vitest";
+import { expect, test } from "vitest";
 import { openLix } from "../lix/open-lix.js";
-import { createChangeSet } from "../change-set/create-change-set.js";
+import { createVersion } from "../version/create-version.js";
 import { createChangeProposal } from "./create-change-proposal.js";
-test.skip("creating a change proposal should compute the symmetric difference", async () => {
+test("createChangeProposal creates a global, open proposal with correct refs", async () => {
     const lix = await openLix({});
-    // Create some changes for change sets
-    const mockChanges = await lix.db
-        .insertInto("change")
-        .values([
-        // Change 1 - only in source change set
-        {
-            schema_key: "file",
-            schema_version: "1.0",
-            entity_id: "value1",
-            file_id: "mock1",
-            plugin_key: "mock-plugin",
-            snapshot_content: null,
-        },
-        // Change 2 - in both source and target (so not in symmetric difference)
-        {
-            schema_key: "file",
-            schema_version: "1.0",
-            entity_id: "value2",
-            file_id: "mock2",
-            plugin_key: "mock-plugin",
-            snapshot_content: null,
-        },
-        // Change 3 - only in target change set
-        {
-            schema_key: "file",
-            entity_id: "value3",
-            file_id: "mock3",
-            schema_version: "1.0",
-            plugin_key: "mock-plugin",
-            snapshot_content: null,
-        },
-    ])
-        .returningAll()
-        .execute();
-    // Create source change set with changes 1 and 2
-    const sourceChangeSet = await createChangeSet({
-        lix: lix,
-        elements: mockChanges.slice(0, 2).map((change) => ({
-            change_id: change.id,
-            entity_id: change.entity_id,
-            schema_key: change.schema_key,
-            file_id: change.file_id,
-        })),
-    });
-    // Create target change set with changes 2 and 3
-    const targetChangeSet = await createChangeSet({
-        lix: lix,
-        elements: mockChanges.slice(1, 3).map((change) => ({
-            change_id: change.id,
-            entity_id: change.entity_id,
-            schema_key: change.schema_key,
-            file_id: change.file_id,
-        })),
+    // Resolve main and create a source version
+    const main = await lix.db
+        .selectFrom("version")
+        .where("name", "=", "main")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    const source = await createVersion({
+        lix,
+        from: main,
+        name: "cp_source_test",
     });
-    // Create a change proposal
-    const proposal = await createChangeProposal({
-        lix: lix,
-        sourceChangeSet: sourceChangeSet,
-        targetChangeSet: targetChangeSet,
+    const cp = await createChangeProposal({ lix, source, target: main });
+    // Basic shape
+    expect(typeof cp.id).toBe("string");
+    expect(cp.id.length).toBeGreaterThan(0);
+    expect(cp.source_version_id).toBe(source.id);
+    expect(cp.target_version_id).toBe(main.id);
+    expect(cp.status).toBe("open");
+    // Lives in global scope
+    const rowAll = await lix.db
+        .selectFrom("change_proposal_by_version")
+        .where("id", "=", cp.id)
+        .where("lixcol_version_id", "=", "global")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    expect(rowAll.lixcol_version_id).toBe("global");
+    // Also visible via scoped view
+    const row = await lix.db
+        .selectFrom("change_proposal")
+        .where("id", "=", cp.id)
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    expect(row.status).toBe("open");
+});
+test("createChangeProposal respects explicit id and status overrides", async () => {
+    const lix = await openLix({});
+    const main = await lix.db
+        .selectFrom("version")
+        .where("name", "=", "main")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    const source = await createVersion({
+        lix,
+        from: main,
+        name: "cp_source_override",
     });
-    // Verify the change proposal was created with the correct data
-    expect(proposal).toMatchObject({
-        id: expect.any(String),
-        source_change_set_id: sourceChangeSet.id,
-        target_change_set_id: targetChangeSet.id,
+    const customId = "cp_custom_id_123";
+    const cp = await createChangeProposal({
+        lix,
+        id: customId,
+        source,
+        target: main,
+        status: "rejected",
     });
-    // The change_set_id should be a new change set
-    expect(proposal.change_set_id).not.toBe(sourceChangeSet.id);
-    expect(proposal.change_set_id).not.toBe(targetChangeSet.id);
-    // Verify the new change set contains only the changes in the symmetric difference
-    const changeSetElements = await lix.db
-        .selectFrom("change_set_element")
+    expect(cp.id).toBe(customId);
+    expect(cp.status).toBe("rejected");
+    const fetched = await lix.db
+        .selectFrom("change_proposal")
+        .where("id", "=", customId)
         .selectAll()
-        .where("change_set_id", "=", proposal.change_set_id)
-        .execute();
-    // Should have 2 changes: change1 and change3, but not change2 (which is in both sets)
-    expect(changeSetElements).toHaveLength(2);
-    // Expected change IDs: the first and third change
-    const expectedChangeIds = [mockChanges[0].id, mockChanges[2].id];
-    // Verify that both expected change IDs are in the result
-    expect(changeSetElements.map((el) => el.change_id)).toEqual(expect.arrayContaining(expectedChangeIds));
-    // Verify no other changes are included (particularly not the common change)
-    expect(changeSetElements.some((el) => el.change_id === mockChanges[1].id)).toBe(false);
+        .executeTakeFirstOrThrow();
+    expect(fetched.status).toBe("rejected");
 });
 //# sourceMappingURL=create-change-proposal.test.js.map

package/dist/change-proposal/create-change-proposal.test.js.map

@@ -1 +1 @@
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package/dist/change-proposal/index.d.ts

@@ -1,3 +1,5 @@
-export * from "./database-schema.js";
-export * from "./create-change-proposal.js";
+export { createChangeProposal } from "./create-change-proposal.js";
+export { acceptChangeProposal } from "./accept-change-proposal.js";
+export { rejectChangeProposal } from "./reject-change-proposal.js";
+export { LixChangeProposalSchema, type LixChangeProposal, } from "./schema-definition.js";
 //# sourceMappingURL=index.d.ts.map

package/dist/change-proposal/index.d.ts.map

@@ -1 +1 @@
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package/dist/change-proposal/index.js

@@ -1,3 +1,5 @@
-export * from "./database-schema.js";
-export * from "./create-change-proposal.js";
+export { createChangeProposal } from "./create-change-proposal.js";
+export { acceptChangeProposal } from "./accept-change-proposal.js";
+export { rejectChangeProposal } from "./reject-change-proposal.js";
+export { LixChangeProposalSchema, } from "./schema-definition.js";
 //# sourceMappingURL=index.js.map

package/dist/change-proposal/index.js.map

@@ -1 +1 @@
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package/dist/change-proposal/reject-change-proposal.d.ts

@@ -0,0 +1,7 @@
+import type { Lix } from "../lix/open-lix.js";
+import type { LixChangeProposal } from "./schema-definition.js";
+export declare function rejectChangeProposal(args: {
+    lix: Lix;
+    proposal: Pick<LixChangeProposal, "id"> | LixChangeProposal;
+}): Promise<void>;
+//# sourceMappingURL=reject-change-proposal.d.ts.map

package/dist/change-proposal/reject-change-proposal.d.ts.map

@@ -0,0 +1 @@
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package/dist/change-proposal/reject-change-proposal.js

@@ -0,0 +1,15 @@
+export async function rejectChangeProposal(args) {
+    const executeInTransaction = async (trx) => {
+        await trx
+            .updateTable("change_proposal")
+            .set({ status: "rejected" })
+            .where("id", "=", args.proposal.id)
+            .execute();
+    };
+    if (args.lix.db.isTransaction) {
+        await executeInTransaction(args.lix.db);
+        return;
+    }
+    return await args.lix.db.transaction().execute(executeInTransaction);
+}
+//# sourceMappingURL=reject-change-proposal.js.map

package/dist/change-proposal/reject-change-proposal.js.map

@@ -0,0 +1 @@
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package/dist/change-proposal/reject-change-proposal.test.d.ts

@@ -0,0 +1,2 @@
+export {};
+//# sourceMappingURL=reject-change-proposal.test.d.ts.map

package/dist/change-proposal/reject-change-proposal.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"reject-change-proposal.test.d.ts","sourceRoot":"","sources":["../../src/change-proposal/reject-change-proposal.test.ts"],"names":[],"mappings":""}

package/dist/change-proposal/reject-change-proposal.test.js

@@ -0,0 +1,28 @@
+import { expect, test } from "vitest";
+import { openLix } from "../lix/open-lix.js";
+import { createVersion } from "../version/create-version.js";
+import { createChangeProposal } from "./create-change-proposal.js";
+import { rejectChangeProposal } from "./reject-change-proposal.js";
+test("rejectChangeProposal updates base change_proposal status", async () => {
+    const lix = await openLix({});
+    const main = await lix.db
+        .selectFrom("version")
+        .where("name", "=", "main")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    const stage = await createVersion({
+        lix,
+        from: main,
+        name: "cp_stage_reject_status",
+    });
+    const cp = await createChangeProposal({ lix, source: stage, target: main });
+    await rejectChangeProposal({ lix, proposal: cp });
+    const updated = await lix.db
+        .selectFrom("change_proposal")
+        .where("id", "=", cp.id)
+        .select(["status"])
+        .executeTakeFirst();
+    expect(updated).toBeDefined();
+    expect(updated?.status).toBe("rejected");
+});
+//# sourceMappingURL=reject-change-proposal.test.js.map

package/dist/change-proposal/reject-change-proposal.test.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"reject-change-proposal.test.js","sourceRoot":"","sources":["../../src/change-proposal/reject-change-proposal.test.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,MAAM,EAAE,IAAI,EAAE,MAAM,QAAQ,CAAC;AACtC,OAAO,EAAE,OAAO,EAAE,MAAM,oBAAoB,CAAC;AAC7C,OAAO,EAAE,aAAa,EAAE,MAAM,8BAA8B,CAAC;AAC7D,OAAO,EAAE,oBAAoB,EAAE,MAAM,6BAA6B,CAAC;AACnE,OAAO,EAAE,oBAAoB,EAAE,MAAM,6BAA6B,CAAC;AAEnE,IAAI,CAAC,0DAA0D,EAAE,KAAK,IAAI,EAAE;IAC3E,MAAM,GAAG,GAAG,MAAM,OAAO,CAAC,EAAE,CAAC,CAAC;IAE9B,MAAM,IAAI,GAAG,MAAM,GAAG,CAAC,EAAE;SACvB,UAAU,CAAC,SAAS,CAAC;SACrB,KAAK,CAAC,MAAM,EAAE,GAAG,EAAE,MAAM,CAAC;SAC1B,SAAS,EAAE;SACX,uBAAuB,EAAE,CAAC;IAE5B,MAAM,KAAK,GAAG,MAAM,aAAa,CAAC;QACjC,GAAG;QACH,IAAI,EAAE,IAAI;QACV,IAAI,EAAE,wBAAwB;KAC9B,CAAC,CAAC;IAEH,MAAM,EAAE,GAAG,MAAM,oBAAoB,CAAC,EAAE,GAAG,EAAE,MAAM,EAAE,KAAK,EAAE,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC;IAE5E,MAAM,oBAAoB,CAAC,EAAE,GAAG,EAAE,QAAQ,EAAE,EAAE,EAAE,CAAC,CAAC;IAElD,MAAM,OAAO,GAAG,MAAM,GAAG,CAAC,EAAE;SAC1B,UAAU,CAAC,iBAAiB,CAAC;SAC7B,KAAK,CAAC,IAAI,EAAE,GAAG,EAAE,EAAE,CAAC,EAAE,CAAC;SACvB,MAAM,CAAC,CAAC,QAAQ,CAAC,CAAC;SAClB,gBAAgB,EAAE,CAAC;IAErB,MAAM,CAAC,OAAO,CAAC,CAAC,WAAW,EAAE,CAAC;IAC9B,MAAM,CAAC,OAAO,EAAE,MAAM,CAAC,CAAC,IAAI,CAAC,UAAU,CAAC,CAAC;AAC1C,CAAC,CAAC,CAAC"}

package/dist/change-proposal/schema-definition.d.ts

@@ -0,0 +1,45 @@
+import type { FromLixSchemaDefinition } from "../schema-definition/definition.js";
+export type LixChangeProposal = FromLixSchemaDefinition<typeof LixChangeProposalSchema>;
+export declare const LixChangeProposalSchema: {
+    readonly "x-lix-key": "lix_change_proposal";
+    readonly "x-lix-version": "1.0";
+    readonly "x-lix-primary-key": readonly ["/id"];
+    readonly "x-lix-override-lixcols": {
+        readonly lixcol_file_id: "\"lix\"";
+        readonly lixcol_plugin_key: "\"lix_sdk\"";
+        readonly lixcol_version_id: "\"global\"";
+    };
+    readonly "x-lix-foreign-keys": readonly [{
+        readonly properties: readonly ["/source_version_id"];
+        readonly references: {
+            readonly schemaKey: "lix_version_descriptor";
+            readonly properties: readonly ["/id"];
+        };
+    }, {
+        readonly properties: readonly ["/target_version_id"];
+        readonly references: {
+            readonly schemaKey: "lix_version_descriptor";
+            readonly properties: readonly ["/id"];
+        };
+    }];
+    readonly type: "object";
+    readonly properties: {
+        readonly id: {
+            readonly type: "string";
+            readonly "x-lix-default": "lix_uuid_v7()";
+        };
+        readonly source_version_id: {
+            readonly type: "string";
+        };
+        readonly target_version_id: {
+            readonly type: "string";
+        };
+        readonly status: {
+            readonly type: "string";
+            readonly "x-lix-default": "'open'";
+        };
+    };
+    readonly required: readonly ["id", "source_version_id", "target_version_id", "status"];
+    readonly additionalProperties: false;
+};
+//# sourceMappingURL=schema-definition.d.ts.map

package/dist/change-proposal/schema-definition.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"schema-definition.d.ts","sourceRoot":"","sources":["../../src/change-proposal/schema-definition.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EACX,uBAAuB,EAEvB,MAAM,oCAAoC,CAAC;AAE5C,MAAM,MAAM,iBAAiB,GAAG,uBAAuB,CACtD,OAAO,uBAAuB,CAC9B,CAAC;AAEF,eAAO,MAAM,uBAAuB;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;;CA+B1B,CAAC"}

package/dist/change-proposal/schema-definition.js

@@ -0,0 +1,34 @@
+export const LixChangeProposalSchema = {
+    "x-lix-key": "lix_change_proposal",
+    "x-lix-version": "1.0",
+    "x-lix-primary-key": ["/id"],
+    "x-lix-override-lixcols": {
+        lixcol_file_id: '"lix"',
+        lixcol_plugin_key: '"lix_sdk"',
+        lixcol_version_id: '"global"',
+    },
+    "x-lix-foreign-keys": [
+        {
+            properties: ["/source_version_id"],
+            references: { schemaKey: "lix_version_descriptor", properties: ["/id"] },
+        },
+        {
+            properties: ["/target_version_id"],
+            references: { schemaKey: "lix_version_descriptor", properties: ["/id"] },
+        },
+    ],
+    type: "object",
+    properties: {
+        id: {
+            type: "string",
+            "x-lix-default": "lix_uuid_v7()",
+        },
+        source_version_id: { type: "string" },
+        target_version_id: { type: "string" },
+        status: { type: "string", "x-lix-default": "'open'" },
+    },
+    required: ["id", "source_version_id", "target_version_id", "status"],
+    additionalProperties: false,
+};
+LixChangeProposalSchema;
+//# sourceMappingURL=schema-definition.js.map

package/dist/change-proposal/schema-definition.js.map

@@ -0,0 +1 @@
+{"version":3,"file":"schema-definition.js","sourceRoot":"","sources":["../../src/change-proposal/schema-definition.ts"],"names":[],"mappings":"AASA,MAAM,CAAC,MAAM,uBAAuB,GAAG;IACtC,WAAW,EAAE,qBAAqB;IAClC,eAAe,EAAE,KAAK;IACtB,mBAAmB,EAAE,CAAC,KAAK,CAAC;IAC5B,wBAAwB,EAAE;QACzB,cAAc,EAAE,OAAO;QACvB,iBAAiB,EAAE,WAAW;QAC9B,iBAAiB,EAAE,UAAU;KAC7B;IACD,oBAAoB,EAAE;QACrB;YACC,UAAU,EAAE,CAAC,oBAAoB,CAAC;YAClC,UAAU,EAAE,EAAE,SAAS,EAAE,wBAAwB,EAAE,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE;SACxE;QACD;YACC,UAAU,EAAE,CAAC,oBAAoB,CAAC;YAClC,UAAU,EAAE,EAAE,SAAS,EAAE,wBAAwB,EAAE,UAAU,EAAE,CAAC,KAAK,CAAC,EAAE;SACxE;KACD;IACD,IAAI,EAAE,QAAQ;IACd,UAAU,EAAE;QACX,EAAE,EAAE;YACH,IAAI,EAAE,QAAQ;YACd,eAAe,EAAE,eAAe;SAChC;QACD,iBAAiB,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE;QACrC,iBAAiB,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE;QACrC,MAAM,EAAE,EAAE,IAAI,EAAE,QAAQ,EAAE,eAAe,EAAE,QAAQ,EAAE;KACrD;IACD,QAAQ,EAAE,CAAC,IAAI,EAAE,mBAAmB,EAAE,mBAAmB,EAAE,QAAQ,CAAC;IACpE,oBAAoB,EAAE,KAAK;CAClB,CAAC;AACX,uBAAqD,CAAC"}

package/dist/change-proposal/schema.test.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"schema.test.d.ts","sourceRoot":"","sources":["../../src/change-proposal/schema.test.ts"],"names":[],"mappings":""}

package/dist/change-proposal/schema.test.js

@@ -0,0 +1,103 @@
+import { expect, test } from "vitest";
+import { openLix } from "../lix/open-lix.js";
+import { createVersion } from "../version/create-version.js";
+test("insert/update/delete on change_proposal views (global, tracked)", async () => {
+    const lix = await openLix({});
+    // Prepare versions to reference
+    const main = await lix.db
+        .selectFrom("version")
+        .where("name", "=", "main")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    const src = await createVersion({ lix, from: main, name: "cp_schema_src" });
+    const tgt = main; // use main as the target
+    // 1) Insert (omit status to exercise default 'open')
+    await lix.db
+        .insertInto("change_proposal_by_version")
+        .values({
+        source_version_id: src.id,
+        target_version_id: tgt.id,
+        lixcol_version_id: "global",
+    })
+        .execute();
+    const inserted = await lix.db
+        .selectFrom("change_proposal")
+        .where("source_version_id", "=", src.id)
+        .where("target_version_id", "=", tgt.id)
+        .orderBy("lixcol_created_at", "desc")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    expect(inserted.status).toBe("open");
+    expect(inserted.source_version_id).toBe(src.id);
+    expect(inserted.target_version_id).toBe(tgt.id);
+    // 2) Verify tracked (not untracked) via _all view
+    const insertedAll = await lix.db
+        .selectFrom("change_proposal_by_version")
+        .where("id", "=", inserted.id)
+        .where("lixcol_version_id", "=", "global")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    expect(insertedAll.lixcol_untracked).toBe(0);
+    expect(insertedAll.lixcol_version_id).toBe("global");
+    // 3) Update status
+    await lix.db
+        .updateTable("change_proposal_by_version")
+        .set({ status: "accepted" })
+        .where("id", "=", inserted.id)
+        .where("lixcol_version_id", "=", "global")
+        .execute();
+    const updated = await lix.db
+        .selectFrom("change_proposal")
+        .where("id", "=", inserted.id)
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    expect(updated.status).toBe("accepted");
+    // 4) Delete
+    await lix.db
+        .deleteFrom("change_proposal_by_version")
+        .where("id", "=", inserted.id)
+        .where("lixcol_version_id", "=", "global")
+        .execute();
+    const afterDelete = await lix.db
+        .selectFrom("change_proposal")
+        .where("id", "=", inserted.id)
+        .select("id")
+        .executeTakeFirst();
+    expect(afterDelete).toBeUndefined();
+});
+test("deleting a version referenced by a change proposal should fail (FK)", async () => {
+    const lix = await openLix({});
+    // Get main as target
+    const main = await lix.db
+        .selectFrom("version")
+        .where("name", "=", "main")
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    // Create a source version from main
+    const src = await createVersion({ lix, from: main, name: "cp_fk_src" });
+    // Create a change proposal referencing src -> main
+    await lix.db
+        .insertInto("change_proposal_by_version")
+        .values({
+        source_version_id: src.id,
+        target_version_id: main.id,
+        lixcol_version_id: "global",
+    })
+        .execute();
+    // Attempt to delete the referenced source version -> should fail due to FK
+    await expect(lix.db.deleteFrom("version").where("id", "=", src.id).execute()).rejects.toThrow();
+    // Cleanup: delete proposal, then deletion should succeed
+    const cp = await lix.db
+        .selectFrom("change_proposal")
+        .where("source_version_id", "=", src.id)
+        .where("target_version_id", "=", main.id)
+        .selectAll()
+        .executeTakeFirstOrThrow();
+    await lix.db
+        .deleteFrom("change_proposal_by_version")
+        .where("id", "=", cp.id)
+        .where("lixcol_version_id", "=", "global")
+        .execute();
+    await expect(lix.db.deleteFrom("version").where("id", "=", src.id).execute()).resolves.toBeDefined();
+});
+//# sourceMappingURL=schema.test.js.map

package/dist/change-proposal/schema.test.js.map

@@ -0,0 +1 @@
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package/dist/change-set/apply-change-set.d.ts

@@ -1,5 +1,5 @@
 import type { Lix } from "../lix/index.js";
-import type { LixChangeSet } from "./schema.js";
+import type { LixChangeSet } from "./schema-definition.js";
 /**
  * Applies a change set to the lix.
  */

package/dist/change-set/apply-change-set.d.ts.map

@@ -1 +1 @@
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+{"version":3,"file":"apply-change-set.d.ts","sourceRoot":"","sources":["../../src/change-set/apply-change-set.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,GAAG,EAAE,MAAM,iBAAiB,CAAC;AAC3C,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,wBAAwB,CAAC;AAI3D;;GAEG;AACH,wBAAsB,cAAc,CAAC,IAAI,EAAE;IAC1C,GAAG,EAAE,GAAG,CAAC;IACT,SAAS,EAAE,IAAI,CAAC,YAAY,EAAE,IAAI,CAAC,CAAC;CACpC,GAAG,OAAO,CAAC,IAAI,CAAC,CA0JhB"}

package/dist/change-set/apply-change-set.js

@@ -1,4 +1,5 @@
 import { updateStateCache } from "../state/cache/update-state-cache.js";
+import { clearFileDataCache } from "../filesystem/file/cache/clear-file-data-cache.js";
 /**
  * Applies a change set to the lix.
  */
@@ -15,7 +16,7 @@ export async function applyChangeSet(args) {
         // This is necessary because we are applying a change set directly
         // and we don't want to create a new change set for this operation
         await trx
-            .insertInto("key_value_all")
+            .insertInto("key_value_by_version")
             .values({
             key: "lix_skip_file_handlers",
             value: true,
@@ -29,49 +30,28 @@ export async function applyChangeSet(args) {
             .set({ commit_id: version.commit_id })
             .where("id", "=", version.id)
             .execute();
-        // Add a parent relationship (create the edge in the commit graph)
-        if (version.commit_id !== version.commit_id) {
-            // Check if edge already exists to avoid conflict
-            const existingEdge = await trx
-                .selectFrom("commit_edge_all")
-                .where("parent_id", "=", version.commit_id)
-                .where("child_id", "=", version.commit_id)
-                .where("lixcol_version_id", "=", "global")
-                .selectAll()
-                .executeTakeFirst();
-            if (!existingEdge) {
-                await trx
-                    .insertInto("commit_edge_all")
-                    .values({
-                    parent_id: version.commit_id,
-                    child_id: version.commit_id,
-                    lixcol_version_id: "global",
-                })
-                    .execute();
-            }
-        }
         // Query for changes in the provided change set (direct mode only)
         const changesResult = await trx
             .selectFrom("change")
-            .innerJoin("change_set_element_all", "change_set_element_all.change_id", "change.id")
-            .where("change_set_element_all.change_set_id", "=", args.changeSet.id)
-            .where("change_set_element_all.lixcol_version_id", "=", "global")
+            .innerJoin("change_set_element_by_version", "change_set_element_by_version.change_id", "change.id")
+            .where("change_set_element_by_version.change_set_id", "=", args.changeSet.id)
+            .where("change_set_element_by_version.lixcol_version_id", "=", "global")
             .selectAll("change")
             .execute();
-        // Write-through cache: populate internal_state_cache for all applied changes
-        for (const change of changesResult) {
-            updateStateCache({
-                lix: args.lix,
-                change: {
-                    ...change,
-                    snapshot_content: change.snapshot_content
-                        ? JSON.stringify(change.snapshot_content)
-                        : null,
-                },
-                version_id: version.id,
-                commit_id: version.commit_id,
-            });
-        }
+        // Write-through cache: populate lix_internal_state_cache for all applied changes
+        const changesForCache = changesResult.map((change) => ({
+            ...change,
+            snapshot_content: change.snapshot_content
+                ? JSON.stringify(change.snapshot_content)
+                : null,
+            metadata: change.metadata ? JSON.stringify(change.metadata) : null,
+        }));
+        updateStateCache({
+            engine: args.lix.engine,
+            changes: changesForCache,
+            version_id: version.id,
+            commit_id: version.commit_id,
+        });
         // Group changes by file_id for processing
         const changesGroupedByFile = Object.groupBy(changesResult, (c) => c.file_id);
         const plugins = await args.lix.plugin.getAll();
@@ -87,7 +67,7 @@ export async function applyChangeSet(args) {
             }
             // Skip plugin processing for lix own file changes (file metadata changes)
             // These are handled by the database triggers and don't need plugin processing
-            const hasLixOwnEntityChanges = changes.some((c) => c.plugin_key === "lix_own_entity");
+            const hasLixOwnEntityChanges = changes.some((c) => c.plugin_key === "lix_sdk");
             if (hasLixOwnEntityChanges) {
                 continue;
             }
@@ -98,6 +78,14 @@ export async function applyChangeSet(args) {
                 await trx.deleteFrom("file").where("id", "=", file_id).execute();
                 continue;
             }
+            // Clear file cache before fetching to ensure we get fresh data
+            // This is important because the file may have been updated by previous operations
+            // and we need the current state for plugin processing
+            clearFileDataCache({
+                engine: args.lix.engine,
+                fileId: file_id,
+                versionId: version.id,
+            });
             const file = await trx
                 .selectFrom("file")
                 .where("id", "=", file_id)
@@ -126,7 +114,7 @@ export async function applyChangeSet(args) {
             }
             // After processing all plugins, emit file change event
             await trx
-                .deleteFrom("key_value_all")
+                .deleteFrom("key_value_by_version")
                 .where("lixcol_version_id", "=", version.id)
                 .where("key", "=", "lix_skip_file_handlers")
                 .execute();