@knowledgine/core 0.2.0 → 0.3.0

package/dist/config/config-loader.d.ts

@@ -1,6 +1,20 @@
 import type { KnowledgineConfig } from "../config.js";
 export interface RcConfig {
     semantic?: boolean;
+    defaultPath?: string;
+    plugins?: {
+        enabled?: string[];
+        [pluginId: string]: unknown;
+    };
+    search?: {
+        defaultMode?: "keyword" | "semantic" | "hybrid";
+        defaultLimit?: number;
+    };
+    serve?: {
+        defaultPort?: number;
+        host?: string;
+    };
+    llm?: import("../llm/types.js").LLMConfig;
     [key: string]: unknown;
 }
 /**
@@ -9,7 +23,13 @@ export interface RcConfig {
  */
 export declare function loadConfig(rootPath: string): KnowledgineConfig;
 /**
- * Write a .knowledginerc.json config file to the project root.
+ * Resolve the default root path.
+ * Priority: cliPath > KNOWLEDGINE_PATH env > cwd/.knowledginerc.json defaultPath > cwd
  */
-export declare function writeRcConfig(rootPath: string, config: RcConfig): void;
+export declare function resolveDefaultPath(cliPath?: string): string;
+/**
+ * Write a .knowledginerc.json config file to the specified directory.
+ * Merges with existing config if present.
+ */
+export declare function writeRcConfig(dirPath: string, config: RcConfig): void;
 //# sourceMappingURL=config-loader.d.ts.map

package/dist/config/config-loader.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"config-loader.d.ts","sourceRoot":"","sources":["../../src/config/config-loader.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,cAAc,CAAC;AAEtD,MAAM,WAAW,QAAQ;IACvB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CACxB;AAED;;;GAGG;AACH,wBAAgB,UAAU,CAAC,QAAQ,EAAE,MAAM,GAAG,iBAAiB,CAgB9D;AAqBD;;GAEG;AACH,wBAAgB,aAAa,CAAC,QAAQ,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,IAAI,CAGtE"}
+{"version":3,"file":"config-loader.d.ts","sourceRoot":"","sources":["../../src/config/config-loader.ts"],"names":[],"mappings":"AAIA,OAAO,KAAK,EAAE,iBAAiB,EAAE,MAAM,cAAc,CAAC;AAEtD,MAAM,WAAW,QAAQ;IACvB,QAAQ,CAAC,EAAE,OAAO,CAAC;IACnB,WAAW,CAAC,EAAE,MAAM,CAAC;IACrB,OAAO,CAAC,EAAE;QAAE,OAAO,CAAC,EAAE,MAAM,EAAE,CAAC;QAAC,CAAC,QAAQ,EAAE,MAAM,GAAG,OAAO,CAAA;KAAE,CAAC;IAC9D,MAAM,CAAC,EAAE;QAAE,WAAW,CAAC,EAAE,SAAS,GAAG,UAAU,GAAG,QAAQ,CAAC;QAAC,YAAY,CAAC,EAAE,MAAM,CAAA;KAAE,CAAC;IACpF,KAAK,CAAC,EAAE;QAAE,WAAW,CAAC,EAAE,MAAM,CAAC;QAAC,IAAI,CAAC,EAAE,MAAM,CAAA;KAAE,CAAC;IAChD,GAAG,CAAC,EAAE,OAAO,iBAAiB,EAAE,SAAS,CAAC;IAC1C,CAAC,GAAG,EAAE,MAAM,GAAG,OAAO,CAAC;CACxB;AAED;;;GAGG;AACH,wBAAgB,UAAU,CAAC,QAAQ,EAAE,MAAM,GAAG,iBAAiB,CAgB9D;AA2BD;;;GAGG;AACH,wBAAgB,kBAAkB,CAAC,OAAO,CAAC,EAAE,MAAM,GAAG,MAAM,CAW3D;AAED;;;GAGG;AACH,wBAAgB,aAAa,CAAC,OAAO,EAAE,MAAM,EAAE,MAAM,EAAE,QAAQ,GAAG,IAAI,CAYrE"}

package/dist/config/config-loader.js

@@ -20,27 +20,62 @@ export function loadConfig(rootPath) {
         },
     });
 }
-function loadRcFile(rootPath) {
-    const jsonPath = resolve(rootPath, ".knowledginerc.json");
-    const ymlPath = resolve(rootPath, ".knowledginerc.yml");
-    try {
-        if (existsSync(jsonPath)) {
-            return JSON.parse(readFileSync(jsonPath, "utf-8"));
+function loadRcFile(startDir) {
+    let dir = startDir;
+    for (let i = 0; i < 5; i++) {
+        const jsonPath = resolve(dir, ".knowledginerc.json");
+        const ymlPath = resolve(dir, ".knowledginerc.yml");
+        try {
+            if (existsSync(jsonPath)) {
+                return JSON.parse(readFileSync(jsonPath, "utf-8"));
+            }
+            if (existsSync(ymlPath)) {
+                return parseYaml(readFileSync(ymlPath, "utf-8"));
+            }
         }
-        if (existsSync(ymlPath)) {
-            return parseYaml(readFileSync(ymlPath, "utf-8"));
+        catch (error) {
+            console.error(`Warning: Failed to parse config file: ${error instanceof Error ? error.message : String(error)}`);
+            return null;
         }
-    }
-    catch (error) {
-        console.error(`Warning: Failed to parse config file: ${error instanceof Error ? error.message : String(error)}`);
+        const parent = resolve(dir, "..");
+        if (parent === dir)
+            break; // ルートに到達
+        dir = parent;
     }
     return null;
 }
 /**
- * Write a .knowledginerc.json config file to the project root.
+ * Resolve the default root path.
+ * Priority: cliPath > KNOWLEDGINE_PATH env > cwd/.knowledginerc.json defaultPath > cwd
+ */
+export function resolveDefaultPath(cliPath) {
+    if (cliPath)
+        return resolve(cliPath);
+    const envPath = process.env["KNOWLEDGINE_PATH"];
+    if (envPath)
+        return resolve(envPath);
+    // Read from cwd's .knowledginerc.json (NOT rootPath's — avoids circular dependency)
+    const rcConfig = loadRcFile(process.cwd());
+    if (rcConfig?.defaultPath)
+        return resolve(rcConfig.defaultPath);
+    return resolve(process.cwd());
+}
+/**
+ * Write a .knowledginerc.json config file to the specified directory.
+ * Merges with existing config if present.
  */
-export function writeRcConfig(rootPath, config) {
-    const rcPath = resolve(rootPath, ".knowledginerc.json");
-    writeFileSync(rcPath, JSON.stringify(config, null, 2) + "\n");
+export function writeRcConfig(dirPath, config) {
+    const rcPath = resolve(dirPath, ".knowledginerc.json");
+    let existing = {};
+    try {
+        if (existsSync(rcPath)) {
+            existing = JSON.parse(readFileSync(rcPath, "utf-8"));
+        }
+    }
+    catch {
+        // If existing file is invalid, overwrite it
+    }
+    const merged = { ...existing, ...config };
+    writeFileSync(rcPath, JSON.stringify(merged, null, 2) + "\n");
 }
 //# sourceMappingURL=config-loader.js.map

package/dist/config/config-loader.js.map

@@ -1 +1 @@
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+{"version":3,"file":"config-loader.js","sourceRoot":"","sources":["../../src/config/config-loader.ts"],"names":[],"mappings":"AAAA,OAAO,EAAE,YAAY,EAAE,UAAU,EAAE,aAAa,EAAE,MAAM,IAAI,CAAC;AAC7D,OAAO,EAAE,OAAO,EAAE,MAAM,MAAM,CAAC;AAC/B,OAAO,EAAE,KAAK,IAAI,SAAS,EAAE,MAAM,MAAM,CAAC;AAC1C,OAAO,EAAE,YAAY,EAAE,MAAM,cAAc,CAAC;AAa5C;;;GAGG;AACH,MAAM,UAAU,UAAU,CAAC,QAAgB;IACzC,MAAM,QAAQ,GAAG,UAAU,CAAC,QAAQ,CAAC,CAAC;IAEtC,gCAAgC;IAChC,MAAM,WAAW,GAAG,OAAO,CAAC,GAAG,CAAC,sBAAsB,CAAC,CAAC;IACxD,MAAM,eAAe,GACnB,WAAW,KAAK,MAAM,IAAI,WAAW,KAAK,GAAG,IAAI,QAAQ,EAAE,QAAQ,KAAK,IAAI,CAAC;IAE/E,OAAO,YAAY,CAAC;QAClB,QAAQ;QACR,SAAS,EAAE;YACT,SAAS,EAAE,kBAAkB;YAC7B,UAAU,EAAE,GAAG;YACf,OAAO,EAAE,eAAe;SACzB;KACF,CAAC,CAAC;AACL,CAAC;AAED,SAAS,UAAU,CAAC,QAAgB;IAClC,IAAI,GAAG,GAAG,QAAQ,CAAC;IACnB,KAAK,IAAI,CAAC,GAAG,CAAC,EAAE,CAAC,GAAG,CAAC,EAAE,CAAC,EAAE,EAAE,CAAC;QAC3B,MAAM,QAAQ,GAAG,OAAO,CAAC,GAAG,EAAE,qBAAqB,CAAC,CAAC;QACrD,MAAM,OAAO,GAAG,OAAO,CAAC,GAAG,EAAE,oBAAoB,CAAC,CAAC;QACnD,IAAI,CAAC;YACH,IAAI,UAAU,CAAC,QAAQ,CAAC,EAAE,CAAC;gBACzB,OAAO,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,QAAQ,EAAE,OAAO,CAAC,CAAa,CAAC;YACjE,CAAC;YACD,IAAI,UAAU,CAAC,OAAO,CAAC,EAAE,CAAC;gBACxB,OAAO,SAAS,CAAC,YAAY,CAAC,OAAO,EAAE,OAAO,CAAC,CAAa,CAAC;YAC/D,CAAC;QACH,CAAC;QAAC,OAAO,KAAK,EAAE,CAAC;YACf,OAAO,CAAC,KAAK,CACX,yCAAyC,KAAK,YAAY,KAAK,CAAC,CAAC,CAAC,KAAK,CAAC,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,KAAK,CAAC,EAAE,CAClG,CAAC;YACF,OAAO,IAAI,CAAC;QACd,CAAC;QACD,MAAM,MAAM,GAAG,OAAO,CAAC,GAAG,EAAE,IAAI,CAAC,CAAC;QAClC,IAAI,MAAM,KAAK,GAAG;YAAE,MAAM,CAAC,SAAS;QACpC,GAAG,GAAG,MAAM,CAAC;IACf,CAAC;IACD,OAAO,IAAI,CAAC;AACd,CAAC;AAED;;;GAGG;AACH,MAAM,UAAU,kBAAkB,CAAC,OAAgB;IACjD,IAAI,OAAO;QAAE,OAAO,OAAO,CAAC,OAAO,CAAC,CAAC;IAErC,MAAM,OAAO,GAAG,OAAO,CAAC,GAAG,CAAC,kBAAkB,CAAC,CAAC;IAChD,IAAI,OAAO;QAAE,OAAO,OAAO,CAAC,OAAO,CAAC,CAAC;IAErC,oFAAoF;IACpF,MAAM,QAAQ,GAAG,UAAU,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAC;IAC3C,IAAI,QAAQ,EAAE,WAAW;QAAE,OAAO,OAAO,CAAC,QAAQ,CAAC,WAAW,CAAC,CAAC;IAEhE,OAAO,OAAO,CAAC,OAAO,CAAC,GAAG,EAAE,CAAC,CAAC;AAChC,CAAC;AAED;;;GAGG;AACH,MAAM,UAAU,aAAa,CAAC,OAAe,EAAE,MAAgB;IAC7D,MAAM,MAAM,GAAG,OAAO,CAAC,OAAO,EAAE,qBAAqB,CAAC,CAAC;IACvD,IAAI,QAAQ,GAAa,EAAE,CAAC;IAC5B,IAAI,CAAC;QACH,IAAI,UAAU,CAAC,MAAM,CAAC,EAAE,CAAC;YACvB,QAAQ,GAAG,IAAI,CAAC,KAAK,CAAC,YAAY,CAAC,MAAM,EAAE,OAAO,CAAC,CAAa,CAAC;QACnE,CAAC;IACH,CAAC;IAAC,MAAM,CAAC;QACP,4CAA4C;IAC9C,CAAC;IACD,MAAM,MAAM,GAAG,EAAE,GAAG,QAAQ,EAAE,GAAG,MAAM,EAAE,CAAC;IAC1C,aAAa,CAAC,MAAM,EAAE,IAAI,CAAC,SAAS,CAAC,MAAM,EAAE,IAAI,EAAE,CAAC,CAAC,GAAG,IAAI,CAAC,CAAC;AAChE,CAAC"}

package/dist/embedding/model-downloader.d.ts.map

@@ -1 +1 @@
-{"version":3,"file":"model-downloader.d.ts","sourceRoot":"","sources":["../../src/embedding/model-downloader.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAMH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAEvD,MAAM,WAAW,gBAAgB;IAC/B,IAAI,EAAE,MAAM,CAAC;IACb,UAAU,EAAE,MAAM,CAAC;IACnB,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;CACtB;AAED,MAAM,WAAW,eAAe;IAC9B,UAAU,CAAC,EAAE,CAAC,QAAQ,EAAE,gBAAgB,KAAK,IAAI,CAAC;IAClD,cAAc,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;IACxC,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,YAAY,CAAC,EAAE,MAAM,CAAC;CACvB;AAED,MAAM,WAAW,SAAS;IACxB,GAAG,EAAE,MAAM,CAAC;IACZ,IAAI,EAAE,MAAM,CAAC;CACd;AAED,eAAO,MAAM,WAAW,EAAE,SAAS,EAalC,CAAC;AAyHF,wBAAsB,aAAa,CACjC,YAAY,EAAE,YAAY,EAC1B,OAAO,GAAE,eAAoB,GAC5B,OAAO,CAAC;IAAE,UAAU,EAAE,MAAM,EAAE,CAAC;IAAC,OAAO,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC,CAqBtD"}
+{"version":3,"file":"model-downloader.d.ts","sourceRoot":"","sources":["../../src/embedding/model-downloader.ts"],"names":[],"mappings":"AAAA;;;;;;;;;;;GAWG;AAMH,OAAO,KAAK,EAAE,YAAY,EAAE,MAAM,oBAAoB,CAAC;AAEvD,MAAM,WAAW,gBAAgB;IAC/B,IAAI,EAAE,MAAM,CAAC;IACb,UAAU,EAAE,MAAM,CAAC;IACnB,KAAK,EAAE,MAAM,GAAG,IAAI,CAAC;CACtB;AAED,MAAM,WAAW,eAAe;IAC9B,UAAU,CAAC,EAAE,CAAC,QAAQ,EAAE,gBAAgB,KAAK,IAAI,CAAC;IAClD,cAAc,CAAC,EAAE,CAAC,IAAI,EAAE,MAAM,KAAK,IAAI,CAAC;IACxC,SAAS,CAAC,EAAE,MAAM,CAAC;IACnB,YAAY,CAAC,EAAE,MAAM,CAAC;CACvB;AAED,MAAM,WAAW,SAAS;IACxB,GAAG,EAAE,MAAM,CAAC;IACZ,IAAI,EAAE,MAAM,CAAC;CACd;AAkBD,eAAO,MAAM,WAAW,EAAE,SAAS,EAalC,CAAC;AAgIF,wBAAsB,aAAa,CACjC,YAAY,EAAE,YAAY,EAC1B,OAAO,GAAE,eAAoB,GAC5B,OAAO,CAAC;IAAE,UAAU,EAAE,MAAM,EAAE,CAAC;IAAC,OAAO,EAAE,MAAM,EAAE,CAAA;CAAE,CAAC,CAqBtD"}

package/dist/embedding/model-downloader.js

@@ -14,17 +14,31 @@ import { mkdirSync, renameSync, unlinkSync, existsSync, statSync, createWriteStr
 import { get as httpsGet } from "https";
 import { get as httpGet } from "http";
 import { pipeline } from "stream/promises";
+const HF_BASE = "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main";
+/**
+ * Select the best quantized ONNX model for the current platform.
+ * HuggingFace removed the generic `model_quantized.onnx` and now ships
+ * architecture-specific variants.
+ */
+function selectOnnxModel() {
+    const arch = process.arch; // "arm64" | "x64" | ...
+    if (arch === "arm64") {
+        return `${HF_BASE}/onnx/model_qint8_arm64.onnx`;
+    }
+    // x64: prefer AVX2 quantized (widely supported on modern x86_64)
+    return `${HF_BASE}/onnx/model_quint8_avx2.onnx`;
+}
 export const MODEL_FILES = [
     {
-        url: "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main/tokenizer.json",
+        url: `${HF_BASE}/tokenizer.json`,
         dest: "tokenizer.json",
     },
     {
-        url: "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main/config.json",
+        url: `${HF_BASE}/config.json`,
         dest: "config.json",
     },
     {
-        url: "https://huggingface.co/sentence-transformers/all-MiniLM-L6-v2/resolve/main/onnx/model_quantized.onnx",
+        url: selectOnnxModel(),
         dest: "model.onnx",
     },
 ];
@@ -58,24 +72,23 @@ function downloadFile(url, destPath, options, fileName, redirectCount = 0) {
         };
         process.on("SIGINT", onSigint);
         const getFunc = url.startsWith("http://") ? httpGet : httpsGet;
-        const timer = setTimeout(() => {
-            aborted = true;
-            req.destroy();
-            cleanup();
-            reject(new Error(`Download timeout (${timeoutMs}ms) for ${fileName}`));
-        }, timeoutMs);
         const req = getFunc(url, (response) => {
             if (aborted)
                 return;
             // Handle redirects (301, 302, 307, 308)
-            if (response.statusCode === 301 || response.statusCode === 302 || response.statusCode === 307 || response.statusCode === 308) {
+            if (response.statusCode === 301 ||
+                response.statusCode === 302 ||
+                response.statusCode === 307 ||
+                response.statusCode === 308) {
                 clearTimeout(timer);
                 process.removeListener("SIGINT", onSigint);
-                const location = response.headers.location;
-                if (!location) {
+                const rawLocation = response.headers.location;
+                if (!rawLocation) {
                     reject(new Error(`Redirect without location header for ${url}`));
                     return;
                 }
+                // Handle relative redirect URLs by resolving against the original URL
+                const location = rawLocation.startsWith("/") ? new URL(rawLocation, url).href : rawLocation;
                 downloadFile(location, destPath, options, fileName, redirectCount + 1)
                     .then(resolve)
                     .catch(reject);
@@ -121,6 +134,12 @@ function downloadFile(url, destPath, options, fileName, redirectCount = 0) {
                 reject(err);
             });
         });
+        const timer = setTimeout(() => {
+            aborted = true;
+            req.destroy();
+            cleanup();
+            reject(new Error(`Download timeout (${timeoutMs}ms) for ${fileName}`));
+        }, timeoutMs);
         req.on("error", (err) => {
             clearTimeout(timer);
             process.removeListener("SIGINT", onSigint);

package/dist/embedding/model-downloader.js.map

@@ -1 +1 @@
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package/dist/extraction/causal-link-detector.d.ts

@@ -0,0 +1,16 @@
+import type { KnowledgeRepository } from "../storage/knowledge-repository.js";
+export interface CausalLinkSummary {
+    causedLinks: number;
+    includedInLinks: number;
+    triggeredLinks: number;
+    errors: number;
+}
+export declare class CausalLinkDetector {
+    private repository;
+    constructor(repository: KnowledgeRepository);
+    detectAll(): CausalLinkSummary;
+    detectSessionToCommitLinks(): number;
+    detectCommitToPRLinks(): number;
+    detectReviewToFixCommitLinks(): number;
+}
+//# sourceMappingURL=causal-link-detector.d.ts.map

package/dist/extraction/causal-link-detector.d.ts.map

@@ -0,0 +1 @@
+{"version":3,"file":"causal-link-detector.d.ts","sourceRoot":"","sources":["../../src/extraction/causal-link-detector.ts"],"names":[],"mappings":"AAAA,OAAO,KAAK,EAAE,mBAAmB,EAAiB,MAAM,oCAAoC,CAAC;AAE7F,MAAM,WAAW,iBAAiB;IAChC,WAAW,EAAE,MAAM,CAAC;IACpB,eAAe,EAAE,MAAM,CAAC;IACxB,cAAc,EAAE,MAAM,CAAC;IACvB,MAAM,EAAE,MAAM,CAAC;CAChB;AAoCD,qBAAa,kBAAkB;IACjB,OAAO,CAAC,UAAU;gBAAV,UAAU,EAAE,mBAAmB;IAEnD,SAAS,IAAI,iBAAiB;IA2B9B,0BAA0B,IAAI,MAAM;IAgCpC,qBAAqB,IAAI,MAAM;IAuB/B,4BAA4B,IAAI,MAAM;CA+BvC"}

package/dist/extraction/causal-link-detector.js

@@ -0,0 +1,142 @@
+const SESSION_TO_COMMIT_THRESHOLD_SECONDS = 1800; // strictly less than
+const REVIEW_TO_COMMIT_THRESHOLD_SECONDS = 24 * 60 * 60; // 24 hours
+function parseFrontmatter(note) {
+    if (!note.frontmatter_json)
+        return {};
+    try {
+        return JSON.parse(note.frontmatter_json);
+    }
+    catch {
+        return {};
+    }
+}
+function getTimestampSeconds(isoString) {
+    if (!isoString)
+        return null;
+    const ms = Date.parse(isoString);
+    if (isNaN(ms))
+        return null;
+    return ms / 1000;
+}
+function extractCommitShaFromUri(uri) {
+    // git://commit/<sha> パターンから SHA を抽出
+    const match = /git:\/\/commit\/([0-9a-f]+)/i.exec(uri);
+    return match ? match[1] : null;
+}
+function isPrNote(note) {
+    // github://repos/... の形式で "reviews" を含まないもの
+    return note.file_path.startsWith("github://") && !note.file_path.includes("/reviews/");
+}
+function isReviewNote(note) {
+    return note.file_path.includes("/reviews/");
+}
+export class CausalLinkDetector {
+    repository;
+    constructor(repository) {
+        this.repository = repository;
+    }
+    detectAll() {
+        let errors = 0;
+        let causedLinks = 0;
+        let includedInLinks = 0;
+        let triggeredLinks = 0;
+        try {
+            causedLinks = this.detectSessionToCommitLinks();
+        }
+        catch {
+            errors++;
+        }
+        try {
+            includedInLinks = this.detectCommitToPRLinks();
+        }
+        catch {
+            errors++;
+        }
+        try {
+            triggeredLinks = this.detectReviewToFixCommitLinks();
+        }
+        catch {
+            errors++;
+        }
+        return { causedLinks, includedInLinks, triggeredLinks, errors };
+    }
+    detectSessionToCommitLinks() {
+        const sessions = this.repository.getNotesBySourceUriPrefix("claude-session://");
+        const commits = this.repository.getNotesBySourceUriPrefix("git://commit/");
+        let linked = 0;
+        for (const session of sessions) {
+            const sessionFm = parseFrontmatter(session);
+            const sessionBranch = typeof sessionFm["gitBranch"] === "string" ? sessionFm["gitBranch"] : null;
+            const sessionTs = getTimestampSeconds(session.created_at);
+            if (sessionTs === null || !sessionBranch)
+                continue;
+            for (const commit of commits) {
+                const commitFm = parseFrontmatter(commit);
+                const commitBranch = typeof commitFm["branch"] === "string" ? commitFm["branch"] : null;
+                const commitTs = getTimestampSeconds(commit.created_at);
+                if (commitTs === null || !commitBranch)
+                    continue;
+                if (sessionBranch !== commitBranch)
+                    continue;
+                const diffSeconds = commitTs - sessionTs;
+                if (diffSeconds < 0 || diffSeconds >= SESSION_TO_COMMIT_THRESHOLD_SECONDS)
+                    continue;
+                const saved = this.repository.saveNoteLinkIfNotExists(session.id, commit.id, "caused");
+                if (saved)
+                    linked++;
+            }
+        }
+        return linked;
+    }
+    detectCommitToPRLinks() {
+        const commits = this.repository.getNotesBySourceUriPrefix("git://commit/");
+        const allGithub = this.repository.getNotesBySourceUriPrefix("github://");
+        const prs = allGithub.filter(isPrNote);
+        let linked = 0;
+        for (const commit of commits) {
+            const sha = extractCommitShaFromUri(commit.file_path);
+            if (!sha || sha.length < 7)
+                continue;
+            // 7文字以上のプレフィックスでマッチ
+            for (const pr of prs) {
+                const shortSha = sha.slice(0, 7);
+                if (!pr.content.includes(shortSha) && !pr.content.includes(sha))
+                    continue;
+                const saved = this.repository.saveNoteLinkIfNotExists(commit.id, pr.id, "included_in");
+                if (saved)
+                    linked++;
+            }
+        }
+        return linked;
+    }
+    detectReviewToFixCommitLinks() {
+        const allGithub = this.repository.getNotesBySourceUriPrefix("github://");
+        const reviews = allGithub.filter(isReviewNote);
+        const commits = this.repository.getNotesBySourceUriPrefix("git://commit/");
+        let linked = 0;
+        for (const review of reviews) {
+            const reviewFm = parseFrontmatter(review);
+            const reviewBranch = typeof reviewFm["branch"] === "string" ? reviewFm["branch"] : null;
+            const reviewTs = getTimestampSeconds(review.created_at);
+            if (reviewTs === null || !reviewBranch)
+                continue;
+            for (const commit of commits) {
+                const commitFm = parseFrontmatter(commit);
+                const commitBranch = typeof commitFm["branch"] === "string" ? commitFm["branch"] : null;
+                const commitTs = getTimestampSeconds(commit.created_at);
+                if (commitTs === null || !commitBranch)
+                    continue;
+                if (reviewBranch !== commitBranch)
+                    continue;
+                const diffSeconds = commitTs - reviewTs;
+                if (diffSeconds < 0 || diffSeconds > REVIEW_TO_COMMIT_THRESHOLD_SECONDS)
+                    continue;
+                const saved = this.repository.saveNoteLinkIfNotExists(review.id, commit.id, "triggered");
+                if (saved)
+                    linked++;
+            }
+        }
+        return linked;
+    }
+}
+//# sourceMappingURL=causal-link-detector.js.map

package/dist/extraction/causal-link-detector.js.map

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package/dist/extraction/incremental-extractor.d.ts

@@ -0,0 +1,21 @@
+import type { KnowledgeRepository } from "../storage/knowledge-repository.js";
+import type { GraphRepository } from "../graph/graph-repository.js";
+export interface ExtractionSummary {
+    processedNotes: number;
+    totalEntities: number;
+    totalRelations: number;
+    totalPatterns: number;
+    errors: number;
+}
+/**
+ * 指定した noteIds に対してパターン抽出・エンティティ抽出・関係推論を実行する。
+ * 各 ingest ソース (GitHub, git-history, capture, MCP 等) 完了後に呼び出すことで
+ * 増分的な抽出を実現する。
+ */
+export declare class IncrementalExtractor {
+    private repository;
+    private graphRepository;
+    constructor(repository: KnowledgeRepository, graphRepository: GraphRepository);
+    process(noteIds: number[], onProgress?: (current: number, total: number) => void): Promise<ExtractionSummary>;
+}
+//# sourceMappingURL=incremental-extractor.d.ts.map

package/dist/extraction/incremental-extractor.d.ts.map

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package/dist/extraction/incremental-extractor.js

@@ -0,0 +1,113 @@
+import { PatternExtractor } from "./pattern-extractor.js";
+import { EntityExtractor } from "../graph/entity-extractor.js";
+import { RelationInferrer } from "../graph/relation-inferrer.js";
+const CHUNK_SIZE = 999; // SQLite IN句の変数制限対策
+/**
+ * パターンを (type, lineNumber, content) キーで重複排除する
+ */
+function deduplicatePatterns(patterns) {
+    const seen = new Set();
+    const result = [];
+    for (const p of patterns) {
+        const key = JSON.stringify([p.type, p.lineNumber ?? null, p.content]);
+        if (!seen.has(key)) {
+            seen.add(key);
+            result.push(p);
+        }
+    }
+    return result;
+}
+/**
+ * 指定した noteIds に対してパターン抽出・エンティティ抽出・関係推論を実行する。
+ * 各 ingest ソース (GitHub, git-history, capture, MCP 等) 完了後に呼び出すことで
+ * 増分的な抽出を実現する。
+ */
+export class IncrementalExtractor {
+    repository;
+    graphRepository;
+    constructor(repository, graphRepository) {
+        this.repository = repository;
+        this.graphRepository = graphRepository;
+    }
+    async process(noteIds, onProgress) {
+        // 1. 重複排除
+        const uniqueIds = [...new Set(noteIds)];
+        const total = uniqueIds.length;
+        if (total === 0) {
+            return {
+                processedNotes: 0,
+                totalEntities: 0,
+                totalRelations: 0,
+                totalPatterns: 0,
+                errors: 0,
+            };
+        }
+        const patternExtractor = new PatternExtractor();
+        const entityExtractor = new EntityExtractor();
+        const inferrer = new RelationInferrer();
+        let processedNotes = 0;
+        let totalEntities = 0;
+        let totalRelations = 0;
+        let totalPatterns = 0;
+        let errors = 0;
+        // 2. チャンク分割（SQLite IN句の変数制限対策）
+        for (let chunkStart = 0; chunkStart < total; chunkStart += CHUNK_SIZE) {
+            const chunk = uniqueIds.slice(chunkStart, chunkStart + CHUNK_SIZE);
+            for (const noteId of chunk) {
+                try {
+                    const note = this.repository.getNoteById(noteId);
+                    if (!note) {
+                        errors++;
+                        continue;
+                    }
+                    const frontmatter = note.frontmatter_json ? JSON.parse(note.frontmatter_json) : {};
+                    const now = new Date().toISOString();
+                    // パターン抽出
+                    const dailyPatterns = patternExtractor.extractDailyPatterns(note.content);
+                    const ticketPatterns = patternExtractor.extractTicketPatterns(note.content);
+                    const allPatterns = deduplicatePatterns([...dailyPatterns, ...ticketPatterns]);
+                    this.repository.savePatterns(note.id, allPatterns);
+                    totalPatterns += allPatterns.length;
+                    // エンティティ抽出
+                    const extractedEntities = entityExtractor.extract(note.content, frontmatter);
+                    const entityList = [];
+                    for (const entity of extractedEntities) {
+                        const entityId = this.graphRepository.upsertEntity({
+                            name: entity.name,
+                            entityType: entity.entityType,
+                            createdAt: now,
+                        });
+                        this.graphRepository.linkEntityToNote(entityId, note.id);
+                        entityList.push({ name: entity.name, entityType: entity.entityType });
+                    }
+                    totalEntities += extractedEntities.length;
+                    // 関係推論
+                    const inferredRelations = inferrer.infer(entityList, frontmatter);
+                    for (const rel of inferredRelations) {
+                        const fromEntity = this.graphRepository.getEntityByName(rel.fromName, rel.fromType);
+                        const toEntity = this.graphRepository.getEntityByName(rel.toName, rel.toType);
+                        if (fromEntity?.id && toEntity?.id) {
+                            this.graphRepository.upsertRelation({
+                                fromEntityId: fromEntity.id,
+                                toEntityId: toEntity.id,
+                                relationType: rel.relationType,
+                                strength: rel.strength,
+                                createdAt: now,
+                            });
+                            totalRelations++;
+                        }
+                    }
+                    // extracted_at を更新
+                    this.repository.updateExtractedAt(note.id);
+                    processedNotes++;
+                    onProgress?.(processedNotes, total);
+                }
+                catch {
+                    errors++;
+                }
+            }
+        }
+        return { processedNotes, totalEntities, totalRelations, totalPatterns, errors };
+    }
+}
+//# sourceMappingURL=incremental-extractor.js.map

package/dist/extraction/incremental-extractor.js.map

@@ -0,0 +1 @@
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package/dist/extraction/psp-detector.d.ts

@@ -17,13 +17,13 @@ export declare class ProblemSolutionDetector {
         category: string;
         confidence: number;
     }>): DetectedPair[];
-    detectPairsAcrossNotes(_problemNote: {
+    detectPairsAcrossNotes(problemNote: {
         id: number;
         patterns: ExtractedPattern[];
-    }, _solutionNote: {
+    }, solutionNote: {
         id: number;
         patterns: ExtractedPattern[];
         createdAt: string;
-    }, _problemNoteCreatedAt: string): DetectedPair[];
+    }, problemNoteCreatedAt: string): DetectedPair[];
 }
 //# sourceMappingURL=psp-detector.d.ts.map

package/dist/extraction/psp-detector.d.ts.map

@@ -1 +1 @@
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