@knowledgine/core 0.0.1 → 0.2.0

package/dist/embedding/tokenizer.js

@@ -0,0 +1,80 @@
+import { readFileSync } from "fs";
+const MAX_LENGTH = 128;
+const UNK_TOKEN = "[UNK]";
+const CLS_TOKEN = "[CLS]";
+const SEP_TOKEN = "[SEP]";
+const PAD_TOKEN = "[PAD]";
+export class WordPieceTokenizer {
+    vocab;
+    unkId;
+    clsId;
+    sepId;
+    padId;
+    constructor(tokenizerJsonPath) {
+        const raw = readFileSync(tokenizerJsonPath, "utf-8");
+        const config = JSON.parse(raw);
+        this.vocab = new Map(Object.entries(config.model.vocab));
+        this.unkId = this.vocab.get(UNK_TOKEN) ?? 100;
+        this.clsId = this.vocab.get(CLS_TOKEN) ?? 101;
+        this.sepId = this.vocab.get(SEP_TOKEN) ?? 102;
+        this.padId = this.vocab.get(PAD_TOKEN) ?? 0;
+    }
+    encode(text) {
+        const tokens = this.tokenize(text);
+        // Account for [CLS] and [SEP]
+        const maxTokens = MAX_LENGTH - 2;
+        const truncated = tokens.slice(0, maxTokens);
+        const ids = [this.clsId, ...truncated.map((t) => this.lookupToken(t)), this.sepId];
+        const mask = new Array(ids.length).fill(1);
+        // Pad to MAX_LENGTH
+        while (ids.length < MAX_LENGTH) {
+            ids.push(this.padId);
+            mask.push(0);
+        }
+        return {
+            inputIds: ids,
+            attentionMask: mask,
+            tokenTypeIds: new Array(MAX_LENGTH).fill(0),
+        };
+    }
+    lookupToken(token) {
+        return this.vocab.get(token) ?? this.unkId;
+    }
+    tokenize(text) {
+        const normalized = text.toLowerCase().trim();
+        const words = normalized.split(/\s+/).filter((w) => w.length > 0);
+        const tokens = [];
+        for (const word of words) {
+            tokens.push(...this.wordpieceTokenize(word));
+        }
+        return tokens;
+    }
+    wordpieceTokenize(word) {
+        if (this.vocab.has(word)) {
+            return [word];
+        }
+        const tokens = [];
+        let start = 0;
+        let isUnk = false;
+        while (start < word.length) {
+            let end = word.length;
+            let found = null;
+            while (start < end) {
+                const substr = (start === 0 ? "" : "##") + word.slice(start, end);
+                if (this.vocab.has(substr)) {
+                    found = substr;
+                    break;
+                }
+                end--;
+            }
+            if (found === null) {
+                isUnk = true;
+                break;
+            }
+            tokens.push(found);
+            start = end;
+        }
+        return isUnk ? [UNK_TOKEN] : tokens;
+    }
+}
+//# sourceMappingURL=tokenizer.js.map

package/dist/embedding/tokenizer.js.map

@@ -0,0 +1 @@
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package/dist/errors.d.ts

@@ -39,4 +39,16 @@ export declare class MemoryPromotionError extends KnowledgeError {
 export declare class MemoryDemotionError extends KnowledgeError {
     constructor(id: number, currentLayer: string);
 }
+/** Error thrown when embedding model is not available */
+export declare class EmbeddingNotAvailableError extends KnowledgeError {
+    constructor(message: string, context?: Record<string, unknown>);
+}
+/** Error thrown when the sqlite-vec extension is unavailable */
+export declare class VectorExtensionError extends KnowledgeError {
+    constructor(message: string, context?: Record<string, unknown>);
+}
+/** Error thrown when an embedding operation fails */
+export declare class EmbeddingError extends KnowledgeError {
+    constructor(message: string, cause?: Error, context?: Record<string, unknown>);
+}
 //# sourceMappingURL=errors.d.ts.map

package/dist/errors.d.ts.map

@@ -1 +1 @@
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package/dist/errors.js

@@ -98,4 +98,25 @@ export class MemoryDemotionError extends KnowledgeError {
         this.name = "MemoryDemotionError";
     }
 }
+/** Error thrown when embedding model is not available */
+export class EmbeddingNotAvailableError extends KnowledgeError {
+    constructor(message, context) {
+        super(message, context);
+        this.name = "EmbeddingNotAvailableError";
+    }
+}
+/** Error thrown when the sqlite-vec extension is unavailable */
+export class VectorExtensionError extends KnowledgeError {
+    constructor(message, context) {
+        super(message, context);
+        this.name = "VectorExtensionError";
+    }
+}
+/** Error thrown when an embedding operation fails */
+export class EmbeddingError extends KnowledgeError {
+    constructor(message, cause, context) {
+        super(message, { cause, ...context });
+        this.name = "EmbeddingError";
+    }
+}
 //# sourceMappingURL=errors.js.map

package/dist/errors.js.map

@@ -1 +1 @@
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package/dist/feedback/feedback-learner.d.ts

@@ -0,0 +1,29 @@
+import { FeedbackRepository } from "./feedback-repository.js";
+export interface TypeOverride {
+    name: string;
+    fromType: string;
+    toType: string;
+}
+export interface WhitelistEntry {
+    name: string;
+    type: string;
+}
+export interface ExtractionRules {
+    version: number;
+    updatedAt: string;
+    stopWords: {
+        added: string[];
+    };
+    typeOverrides: TypeOverride[];
+    entityBlacklist: string[];
+    entityWhitelist: WhitelistEntry[];
+}
+export declare class FeedbackLearner {
+    private feedbackRepository;
+    private rulesPath;
+    constructor(feedbackRepository: FeedbackRepository, rulesPath: string);
+    applyFeedback(feedbackId: number): void;
+    loadRules(): ExtractionRules;
+    private saveRules;
+}
+//# sourceMappingURL=feedback-learner.d.ts.map

package/dist/feedback/feedback-learner.d.ts.map

@@ -0,0 +1 @@
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package/dist/feedback/feedback-learner.js

@@ -0,0 +1,88 @@
+import { readFileSync, writeFileSync, renameSync } from "fs";
+import { join, dirname } from "path";
+import { FeedbackRepository } from "./feedback-repository.js";
+function createEmptyRules() {
+    return {
+        version: 1,
+        updatedAt: new Date().toISOString(),
+        stopWords: { added: [] },
+        typeOverrides: [],
+        entityBlacklist: [],
+        entityWhitelist: [],
+    };
+}
+export class FeedbackLearner {
+    feedbackRepository;
+    rulesPath;
+    constructor(feedbackRepository, rulesPath) {
+        this.feedbackRepository = feedbackRepository;
+        this.rulesPath = rulesPath;
+    }
+    applyFeedback(feedbackId) {
+        const feedback = this.feedbackRepository.getById(feedbackId);
+        if (!feedback) {
+            throw new Error(`Feedback record not found: id=${feedbackId}`);
+        }
+        const rules = this.loadRules();
+        switch (feedback.errorType) {
+            case "false_positive":
+                if (!rules.entityBlacklist.includes(feedback.entityName)) {
+                    rules.entityBlacklist.push(feedback.entityName);
+                }
+                break;
+            case "wrong_type":
+                if (!feedback.entityType || !feedback.correctType) {
+                    throw new Error("wrong_type feedback requires both entityType and correctType");
+                }
+                // Check for existing override for same entity name
+                const existingIdx = rules.typeOverrides.findIndex((o) => o.name === feedback.entityName);
+                const override = {
+                    name: feedback.entityName,
+                    fromType: feedback.entityType,
+                    toType: feedback.correctType,
+                };
+                if (existingIdx >= 0) {
+                    rules.typeOverrides[existingIdx] = override;
+                }
+                else {
+                    rules.typeOverrides.push(override);
+                }
+                break;
+            case "missed_entity": {
+                const entityType = feedback.correctType ?? feedback.entityType ?? "technology";
+                // Check for existing whitelist entry for same entity name
+                const existingWlIdx = rules.entityWhitelist.findIndex((w) => w.name === feedback.entityName);
+                const entry = {
+                    name: feedback.entityName,
+                    type: entityType,
+                };
+                if (existingWlIdx >= 0) {
+                    rules.entityWhitelist[existingWlIdx] = entry;
+                }
+                else {
+                    rules.entityWhitelist.push(entry);
+                }
+                break;
+            }
+        }
+        rules.updatedAt = new Date().toISOString();
+        this.saveRules(rules);
+        this.feedbackRepository.updateStatus(feedbackId, "applied");
+    }
+    loadRules() {
+        try {
+            const content = readFileSync(this.rulesPath, "utf-8");
+            return JSON.parse(content);
+        }
+        catch {
+            return createEmptyRules();
+        }
+    }
+    saveRules(rules) {
+        const dir = dirname(this.rulesPath);
+        const tmpPath = join(dir, `.extraction-rules.tmp.${process.pid}.json`);
+        writeFileSync(tmpPath, JSON.stringify(rules, null, 2), "utf-8");
+        renameSync(tmpPath, this.rulesPath);
+    }
+}
+//# sourceMappingURL=feedback-learner.js.map

package/dist/feedback/feedback-learner.js.map

@@ -0,0 +1 @@
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package/dist/feedback/feedback-repository.d.ts

@@ -0,0 +1,41 @@
+import type Database from "better-sqlite3";
+import type { FeedbackErrorType, FeedbackStatus } from "../types.js";
+export interface CreateFeedbackInput {
+    entityName: string;
+    errorType: FeedbackErrorType;
+    entityType?: string;
+    correctType?: string;
+    noteId?: number;
+    details?: string;
+}
+export interface FeedbackRecord {
+    id: number;
+    entityName: string;
+    entityType: string | null;
+    errorType: FeedbackErrorType;
+    correctType: string | null;
+    noteId: number | null;
+    details: string | null;
+    status: FeedbackStatus;
+    createdAt: string;
+    appliedAt: string | null;
+}
+export declare class FeedbackRepository {
+    private db;
+    constructor(db: Database.Database);
+    create(input: CreateFeedbackInput): FeedbackRecord;
+    getById(id: number): FeedbackRecord | undefined;
+    list(options?: {
+        status?: string;
+        limit?: number;
+    }): FeedbackRecord[];
+    updateStatus(id: number, status: string): void;
+    delete(id: number): void;
+    getStats(): {
+        total: number;
+        pending: number;
+        applied: number;
+        dismissed: number;
+    };
+}
+//# sourceMappingURL=feedback-repository.d.ts.map

package/dist/feedback/feedback-repository.d.ts.map

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package/dist/feedback/feedback-repository.js

@@ -0,0 +1,94 @@
+const VALID_ERROR_TYPES = ["false_positive", "wrong_type", "missed_entity"];
+const VALID_STATUSES = ["pending", "applied", "dismissed"];
+function rowToRecord(row) {
+    return {
+        id: row.id,
+        entityName: row.entity_name,
+        entityType: row.entity_type,
+        errorType: row.error_type,
+        correctType: row.correct_type,
+        noteId: row.note_id,
+        details: row.details,
+        status: row.status,
+        createdAt: row.created_at,
+        appliedAt: row.applied_at,
+    };
+}
+export class FeedbackRepository {
+    db;
+    constructor(db) {
+        this.db = db;
+    }
+    create(input) {
+        if (!VALID_ERROR_TYPES.includes(input.errorType)) {
+            throw new Error(`Invalid error_type: "${input.errorType}". Must be one of: ${VALID_ERROR_TYPES.join(", ")}`);
+        }
+        const stmt = this.db.prepare(`
+      INSERT INTO extraction_feedback (entity_name, entity_type, error_type, correct_type, note_id, details)
+      VALUES (?, ?, ?, ?, ?, ?)
+    `);
+        const info = stmt.run(input.entityName, input.entityType ?? null, input.errorType, input.correctType ?? null, input.noteId ?? null, input.details ?? null);
+        return this.getById(Number(info.lastInsertRowid));
+    }
+    getById(id) {
+        const row = this.db
+            .prepare("SELECT * FROM extraction_feedback WHERE id = ?")
+            .get(id);
+        return row ? rowToRecord(row) : undefined;
+    }
+    list(options) {
+        const conditions = [];
+        const params = [];
+        if (options?.status) {
+            if (!VALID_STATUSES.includes(options.status)) {
+                throw new Error(`Invalid status: "${options.status}". Must be one of: ${VALID_STATUSES.join(", ")}`);
+            }
+            conditions.push("status = ?");
+            params.push(options.status);
+        }
+        const where = conditions.length > 0 ? `WHERE ${conditions.join(" AND ")}` : "";
+        const limit = options?.limit ?? 100;
+        params.push(limit);
+        const rows = this.db
+            .prepare(`SELECT * FROM extraction_feedback ${where} ORDER BY created_at DESC LIMIT ?`)
+            .all(...params);
+        return rows.map(rowToRecord);
+    }
+    updateStatus(id, status) {
+        if (!VALID_STATUSES.includes(status)) {
+            throw new Error(`Invalid status: "${status}". Must be one of: ${VALID_STATUSES.join(", ")}`);
+        }
+        const appliedAt = status === "applied" ? new Date().toISOString() : null;
+        const info = this.db
+            .prepare("UPDATE extraction_feedback SET status = ?, applied_at = ? WHERE id = ?")
+            .run(status, appliedAt, id);
+        if (info.changes === 0) {
+            throw new Error(`Feedback record not found: id=${id}`);
+        }
+    }
+    delete(id) {
+        const info = this.db
+            .prepare("DELETE FROM extraction_feedback WHERE id = ?")
+            .run(id);
+        if (info.changes === 0) {
+            throw new Error(`Feedback record not found: id=${id}`);
+        }
+    }
+    getStats() {
+        const rows = this.db
+            .prepare(`SELECT status, COUNT(*) as count FROM extraction_feedback GROUP BY status`)
+            .all();
+        const stats = { total: 0, pending: 0, applied: 0, dismissed: 0 };
+        for (const row of rows) {
+            stats.total += row.count;
+            if (row.status === "pending")
+                stats.pending = row.count;
+            else if (row.status === "applied")
+                stats.applied = row.count;
+            else if (row.status === "dismissed")
+                stats.dismissed = row.count;
+        }
+        return stats;
+    }
+}
+//# sourceMappingURL=feedback-repository.js.map

package/dist/feedback/feedback-repository.js.map

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package/dist/feedback/index.d.ts

@@ -0,0 +1,5 @@
+export { FeedbackRepository } from "./feedback-repository.js";
+export type { CreateFeedbackInput, FeedbackRecord } from "./feedback-repository.js";
+export { FeedbackLearner } from "./feedback-learner.js";
+export type { ExtractionRules, TypeOverride, WhitelistEntry } from "./feedback-learner.js";
+//# sourceMappingURL=index.d.ts.map

package/dist/feedback/index.d.ts.map

@@ -0,0 +1 @@
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package/dist/feedback/index.js

@@ -0,0 +1,3 @@
+export { FeedbackRepository } from "./feedback-repository.js";
+export { FeedbackLearner } from "./feedback-learner.js";
+//# sourceMappingURL=index.js.map

package/dist/feedback/index.js.map

@@ -0,0 +1 @@
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package/dist/graph/entity-extractor.d.ts

@@ -0,0 +1,26 @@
+import type { EntityType } from "../types.js";
+import type { ExtractionRules } from "../feedback/feedback-learner.js";
+export interface ExtractedEntity {
+    name: string;
+    entityType: EntityType;
+    sourceType: "tag" | "import" | "link" | "code" | "mention" | "frontmatter" | "whitelist";
+}
+/**
+ * Extracts entities from note text, with optional post-processing via ExtractionRules.
+ */
+export declare class EntityExtractor {
+    private rules?;
+    constructor(rules?: ExtractionRules);
+    extract(content: string, frontmatter?: Record<string, unknown>): ExtractedEntity[];
+    private applyRules;
+    private extractFromFrontmatterTags;
+    private extractFromFrontmatterFields;
+    private extractImports;
+    private extractMarkdownLinks;
+    private extractInlineCode;
+    private extractMentions;
+    private extractOrgRepos;
+    private isStopWord;
+    private deduplicate;
+}
+//# sourceMappingURL=entity-extractor.d.ts.map

package/dist/graph/entity-extractor.d.ts.map

@@ -0,0 +1 @@
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