@kaelio/ktx 0.0.0 → 0.1.0-rc.0

package/dist/setup.test.js

@@ -0,0 +1,1220 @@
+import { mkdir, mkdtemp, readFile, rm, stat, writeFile } from 'node:fs/promises';
+import { tmpdir } from 'node:os';
+import { join } from 'node:path';
+import { afterEach, beforeEach, describe, expect, it, vi } from 'vitest';
+import { contextBuildCommands, writeKtxSetupContextState } from './setup-context.js';
+import { readKtxSetupStatus, runKtxSetup } from './setup.js';
+function makeIo() {
+    let stdout = '';
+    let stderr = '';
+    return {
+        io: {
+            stdout: {
+                write: (chunk) => {
+                    stdout += chunk;
+                },
+            },
+            stderr: {
+                write: (chunk) => {
+                    stderr += chunk;
+                },
+            },
+        },
+        stdout: () => stdout,
+        stderr: () => stderr,
+    };
+}
+describe('setup status', () => {
+    let tempDir;
+    beforeEach(async () => {
+        tempDir = await mkdtemp(join(tmpdir(), 'ktx-setup-status-'));
+    });
+    afterEach(async () => {
+        await rm(tempDir, { recursive: true, force: true });
+    });
+    it('reports a missing project without creating files', async () => {
+        const status = await readKtxSetupStatus(tempDir);
+        expect(status).toMatchObject({
+            project: { path: tempDir, ready: false },
+            llm: { ready: false },
+            embeddings: { ready: false },
+            databases: [],
+            sources: [],
+            context: { ready: false, status: 'not_started' },
+            agents: [],
+        });
+    });
+    it('reports deterministic default embeddings as not setup-ready', async () => {
+        await mkdir(tempDir, { recursive: true });
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'llm:',
+            '  provider:',
+            '    backend: anthropic',
+            '    anthropic:',
+            '      api_key: env:ANTHROPIC_API_KEY',
+            '  models:',
+            '    default: claude-sonnet-4-6',
+            'ingest:',
+            '  embeddings:',
+            '    backend: deterministic',
+            '    model: deterministic',
+            '    dimensions: 8',
+            'connections: {}',
+        ].join('\n'), 'utf-8');
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            project: { path: tempDir, ready: true },
+            llm: { backend: 'anthropic', ready: true, model: 'claude-sonnet-4-6' },
+            embeddings: { backend: 'deterministic', ready: false, model: 'deterministic', dimensions: 8 },
+        });
+    });
+    it('uses setup database connection ids when present', async () => {
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'setup:',
+            '  database_connection_ids:',
+            '    - warehouse',
+            '    - analytics',
+            '  completed_steps:',
+            '    - project',
+            '    - databases',
+            'connections:',
+            '  warehouse:',
+            '    driver: postgres',
+            '    url: env:WAREHOUSE_URL',
+            'ingest:',
+            '  embeddings:',
+            '    backend: openai',
+            '    model: text-embedding-3-small',
+            '    dimensions: 1536',
+            '    openai:',
+            '      api_key: env:OPENAI_API_KEY',
+        ].join('\n'), 'utf-8');
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            databases: [
+                { connectionId: 'warehouse', ready: true },
+                { connectionId: 'analytics', ready: false },
+            ],
+        });
+    });
+    it('reports selected databases as ready only after the database setup step is complete', async () => {
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'setup:',
+            '  database_connection_ids:',
+            '    - warehouse',
+            '  completed_steps:',
+            '    - project',
+            'connections:',
+            '  warehouse:',
+            '    driver: postgres',
+            '    url: env:DATABASE_URL',
+            '    readonly: true',
+            '',
+        ].join('\n'), 'utf-8');
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            databases: [{ connectionId: 'warehouse', ready: false }],
+        });
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'setup:',
+            '  database_connection_ids:',
+            '    - warehouse',
+            '  completed_steps:',
+            '    - project',
+            '    - databases',
+            'connections:',
+            '  warehouse:',
+            '    driver: postgres',
+            '    url: env:DATABASE_URL',
+            '    readonly: true',
+            '',
+        ].join('\n'), 'utf-8');
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            databases: [{ connectionId: 'warehouse', ready: true }],
+        });
+    });
+    it('reports source status from configured source connections', async () => {
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'setup:',
+            '  database_connection_ids: []',
+            '  completed_steps:',
+            '    - project',
+            '    - sources',
+            'connections:',
+            '  docs:',
+            '    driver: notion',
+            '    auth_token_ref: env:NOTION_TOKEN',
+            '    crawl_mode: all_accessible',
+            '  warehouse:',
+            '    driver: postgres',
+            '    url: env:DATABASE_URL',
+            '',
+        ].join('\n'), 'utf-8');
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            sources: [{ connectionId: 'docs', type: 'notion', ready: true }],
+        });
+    });
+    it('reports agent status from the install manifest', async () => {
+        await mkdir(join(tempDir, '.ktx', 'agents'), { recursive: true });
+        await writeFile(join(tempDir, 'ktx.yaml'), 'project: revenue\nconnections: {}\n', 'utf-8');
+        await writeFile(join(tempDir, '.ktx/agents/install-manifest.json'), JSON.stringify({
+            version: 1,
+            projectDir: tempDir,
+            installedAt: '2026-05-07T00:00:00.000Z',
+            installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+            entries: [],
+        }, null, 2), 'utf-8');
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            agents: [{ target: 'codex', scope: 'project', ready: true }],
+        });
+    });
+    it('reports setup-managed context build status and commands', async () => {
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'setup:',
+            '  database_connection_ids:',
+            '    - warehouse',
+            '  completed_steps:',
+            '    - project',
+            '    - llm',
+            '    - embeddings',
+            '    - databases',
+            '    - sources',
+            'connections:',
+            '  warehouse:',
+            '    driver: postgres',
+            '    url: env:DATABASE_URL',
+            'llm:',
+            '  provider:',
+            '    backend: anthropic',
+            '  models:',
+            '    default: claude-sonnet-4-6',
+            'ingest:',
+            '  embeddings:',
+            '    backend: openai',
+            '    model: text-embedding-3-small',
+            '    dimensions: 1536',
+            '',
+        ].join('\n'), 'utf-8');
+        await writeKtxSetupContextState(tempDir, {
+            runId: 'setup-context-local-abc123',
+            status: 'running',
+            startedAt: '2026-05-09T10:00:00.000Z',
+            updatedAt: '2026-05-09T10:01:00.000Z',
+            primarySourceConnectionIds: ['warehouse'],
+            contextSourceConnectionIds: [],
+            reportIds: [],
+            artifactPaths: [],
+            retryableFailedTargets: [],
+            commands: contextBuildCommands(tempDir, 'setup-context-local-abc123'),
+        });
+        await expect(readKtxSetupStatus(tempDir)).resolves.toMatchObject({
+            context: {
+                ready: false,
+                status: 'running',
+                runId: 'setup-context-local-abc123',
+                watchCommand: `ktx setup context watch setup-context-local-abc123 --project-dir ${tempDir}`,
+                statusCommand: `ktx setup context status setup-context-local-abc123 --project-dir ${tempDir}`,
+            },
+        });
+    });
+    it('prints plain and JSON setup status', async () => {
+        const plainIo = makeIo();
+        const jsonIo = makeIo();
+        await expect(runKtxSetup({ command: 'status', projectDir: tempDir, json: false }, plainIo.io)).resolves.toBe(0);
+        await expect(runKtxSetup({ command: 'status', projectDir: tempDir, json: true }, jsonIo.io)).resolves.toBe(0);
+        expect(plainIo.stdout()).toContain(`No KTX project found at ${tempDir}.`);
+        expect(plainIo.stdout()).toContain('Check another project: ktx --project-dir <folder> setup status');
+        expect(plainIo.stdout()).toContain('Or from that folder: ktx setup status');
+        expect(plainIo.stdout()).toContain('Create a new KTX project here: ktx setup');
+        expect(plainIo.stdout()).not.toContain('Project ready: no');
+        expect(JSON.parse(jsonIo.stdout())).toMatchObject({ project: { path: tempDir, ready: false } });
+        expect(plainIo.stderr()).toBe('');
+        expect(jsonIo.stderr()).toBe('');
+    });
+    it('prints the readiness checklist for an existing project', async () => {
+        const testIo = makeIo();
+        await writeFile(join(tempDir, 'ktx.yaml'), 'project: revenue\nconnections: {}\n', 'utf-8');
+        await expect(runKtxSetup({ command: 'status', projectDir: tempDir, json: false }, testIo.io)).resolves.toBe(0);
+        expect(testIo.stdout()).toContain(`KTX project: ${tempDir}`);
+        expect(testIo.stdout()).toContain('Project ready: yes');
+        expect(testIo.stdout()).toContain('LLM ready: no');
+        expect(testIo.stdout()).toContain('KTX context built: no');
+        expect(testIo.stdout()).not.toContain('No KTX project found.');
+        expect(testIo.stderr()).toBe('');
+    });
+    it('prints the setup shell intro for auto-created run mode', async () => {
+        const testIo = makeIo();
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io)).resolves.toBe(0);
+        expect(testIo.stdout()).toContain('KTX setup');
+        expect(testIo.stdout()).toContain(`Project: ${tempDir}`);
+        expect(testIo.stdout()).toContain('Project ready: yes');
+        expect(testIo.stdout()).toContain('What you can do next:');
+        expect(testIo.stdout()).toContain('Connect data, then build context.');
+        expect(testIo.stdout()).toContain('ktx setup');
+        expect(testIo.stdout()).not.toContain('ktx agent context --json');
+        expect(testIo.stdout()).not.toContain('Optional MCP:');
+        expect(testIo.stderr()).toBe('');
+    });
+    it('shows demo near the bottom of the first setup intent menu before project creation', async () => {
+        const testIo = makeIo();
+        const select = vi.fn(async (options) => {
+            const labels = options.options.map((option) => option.label);
+            expect(labels).toEqual([
+                'Set up KTX for my data',
+                'Check setup status',
+                'Try KTX with packaged demo data',
+                'Exit',
+            ]);
+            expect(labels.indexOf('Try KTX with packaged demo data')).toBe(labels.length - 2);
+            return 'exit';
+        });
+        const cancel = vi.fn();
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: false,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: false,
+            skipSources: false,
+            showEntryMenu: true,
+        }, testIo.io, { entryMenuDeps: { prompts: { select, cancel } } })).resolves.toBe(0);
+        expect(select).toHaveBeenCalledWith(expect.objectContaining({ message: 'What do you want to do?' }));
+        expect(cancel).toHaveBeenCalledWith('Setup cancelled.');
+    });
+    it('shows agent connection only when the selected setup project exists', async () => {
+        const missingIo = makeIo();
+        const existingIo = makeIo();
+        const missingSelect = vi.fn(async (options) => {
+            expect(options.options.map((option) => option.label)).not.toContain('Connect a coding agent to KTX');
+            return 'exit';
+        });
+        const existingSelect = vi.fn(async (options) => {
+            const labels = options.options.map((option) => option.label);
+            expect(labels).toEqual([
+                'Resume or change an existing setup',
+                'Create a new KTX project',
+                'Connect a coding agent to KTX',
+                'Check setup status',
+                'Try KTX with packaged demo data',
+                'Exit',
+            ]);
+            return 'exit';
+        });
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: false,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: false,
+            skipSources: false,
+            showEntryMenu: true,
+        }, missingIo.io, { entryMenuDeps: { prompts: { select: missingSelect, cancel: vi.fn() } } })).resolves.toBe(0);
+        await writeFile(join(tempDir, 'ktx.yaml'), 'project: revenue\nconnections: {}\n', 'utf-8');
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: false,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: false,
+            skipSources: false,
+            showEntryMenu: true,
+        }, existingIo.io, { entryMenuDeps: { prompts: { select: existingSelect, cancel: vi.fn() } } })).resolves.toBe(0);
+        expect(missingSelect).toHaveBeenCalledTimes(1);
+        expect(existingSelect).toHaveBeenCalledTimes(1);
+    });
+    it('lets Back from project selection return to the first setup intent menu', async () => {
+        const entryChoices = ['setup', 'exit'];
+        const entryPrompts = {
+            select: vi.fn(async () => entryChoices.shift() ?? 'exit'),
+            cancel: vi.fn(),
+        };
+        const projectPrompts = {
+            select: vi.fn(async () => 'back'),
+            text: vi.fn(),
+            cancel: vi.fn(),
+        };
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+            showEntryMenu: true,
+        }, makeIo().io, {
+            entryMenuDeps: { prompts: entryPrompts },
+            project: { prompts: projectPrompts },
+        })).resolves.toBe(0);
+        expect(projectPrompts.select).toHaveBeenCalledWith(expect.objectContaining({
+            message: 'Which KTX project should setup use?',
+            options: expect.arrayContaining([expect.objectContaining({ value: 'back', label: 'Back' })]),
+        }));
+        expect(projectPrompts.select).toHaveBeenCalledWith(expect.objectContaining({
+            message: 'Which KTX project should setup use?',
+            options: expect.not.arrayContaining([expect.objectContaining({ value: 'exit', label: 'Exit' })]),
+        }));
+        expect(entryPrompts.select).toHaveBeenCalledTimes(2);
+        expect(entryPrompts.cancel).toHaveBeenCalledWith('Setup cancelled.');
+        expect(projectPrompts.cancel).not.toHaveBeenCalled();
+        await expect(stat(join(tempDir, 'ktx.yaml'))).rejects.toThrow();
+    });
+    it('lets Back from new project creation return to the first setup intent menu', async () => {
+        const existingConfig = 'project: revenue\nconnections: {}\n';
+        await writeFile(join(tempDir, 'ktx.yaml'), existingConfig, 'utf-8');
+        const entryChoices = ['new-project', 'exit'];
+        const entryPrompts = {
+            select: vi.fn(async () => entryChoices.shift() ?? 'exit'),
+            cancel: vi.fn(),
+        };
+        const projectPrompts = {
+            select: vi.fn(async () => 'back'),
+            text: vi.fn(),
+            cancel: vi.fn(),
+        };
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+            showEntryMenu: true,
+        }, makeIo().io, {
+            entryMenuDeps: { prompts: entryPrompts },
+            project: { prompts: projectPrompts },
+        })).resolves.toBe(0);
+        expect(projectPrompts.select).toHaveBeenCalledWith(expect.objectContaining({
+            message: 'Where should KTX create the project?',
+            options: expect.arrayContaining([expect.objectContaining({ value: 'back', label: 'Back' })]),
+        }));
+        expect(entryPrompts.select).toHaveBeenCalledTimes(2);
+        expect(entryPrompts.cancel).toHaveBeenCalledWith('Setup cancelled.');
+        expect(projectPrompts.cancel).not.toHaveBeenCalled();
+        await expect(readFile(join(tempDir, 'ktx.yaml'), 'utf-8')).resolves.toBe(existingConfig);
+    });
+    it('creates a separate project when the existing setup menu chooses new project', async () => {
+        const existingProjectDir = join(tempDir, 'existing');
+        const newProjectDir = join(tempDir, 'fresh');
+        await mkdir(existingProjectDir, { recursive: true });
+        const existingConfig = 'project: revenue\nconnections: {}\n';
+        await writeFile(join(existingProjectDir, 'ktx.yaml'), existingConfig, 'utf-8');
+        const projectChoices = ['custom', 'create'];
+        const projectPrompts = {
+            select: vi.fn(async () => projectChoices.shift() ?? 'exit'),
+            text: vi.fn(async () => newProjectDir),
+            cancel: vi.fn(),
+        };
+        const model = vi.fn(async (args) => ({
+            status: 'skipped',
+            projectDir: args.projectDir,
+        }));
+        const embeddings = vi.fn(async (args) => ({
+            status: 'skipped',
+            projectDir: args.projectDir,
+        }));
+        const databases = vi.fn(async (args) => ({
+            status: 'skipped',
+            projectDir: args.projectDir,
+        }));
+        const sources = vi.fn(async (args) => ({
+            status: 'skipped',
+            projectDir: args.projectDir,
+        }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: existingProjectDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+            showEntryMenu: true,
+        }, makeIo().io, {
+            entryMenuDeps: { prompts: { select: vi.fn(async () => 'new-project'), cancel: vi.fn() } },
+            project: { prompts: projectPrompts },
+            model,
+            embeddings,
+            databases,
+            sources,
+        })).resolves.toBe(0);
+        expect(projectPrompts.text).toHaveBeenCalledWith(expect.objectContaining({
+            message: 'Project folder path\nPress Escape to go back.\n',
+            placeholder: './analytics-ktx, ~/analytics-ktx, or /Users/you/projects/analytics-ktx',
+        }));
+        expect(projectPrompts.select).toHaveBeenCalledWith(expect.objectContaining({ message: 'Where should KTX create the project?' }));
+        await expect(stat(join(newProjectDir, 'ktx.yaml'))).resolves.toBeDefined();
+        await expect(readFile(join(existingProjectDir, 'ktx.yaml'), 'utf-8')).resolves.toBe(existingConfig);
+        expect(model).toHaveBeenCalledWith(expect.objectContaining({ projectDir: newProjectDir }), expect.anything());
+        expect(embeddings).toHaveBeenCalledWith(expect.objectContaining({ projectDir: newProjectDir }), expect.anything());
+        expect(databases).toHaveBeenCalledWith(expect.objectContaining({ projectDir: newProjectDir }), expect.anything());
+        expect(sources).toHaveBeenCalledWith(expect.objectContaining({ projectDir: newProjectDir }), expect.anything());
+    });
+    it('does not print navigation instructions immediately after confirming new project creation', async () => {
+        const existingProjectDir = join(tempDir, 'existing');
+        const newProjectDir = join(tempDir, 'fresh');
+        await mkdir(existingProjectDir, { recursive: true });
+        await writeFile(join(existingProjectDir, 'ktx.yaml'), 'project: revenue\nconnections: {}\n', 'utf-8');
+        const projectChoices = ['custom', 'create'];
+        const projectPrompts = {
+            select: vi.fn(async () => projectChoices.shift() ?? 'exit'),
+            text: vi.fn(async () => newProjectDir),
+            cancel: vi.fn(),
+        };
+        const model = vi.fn(async (args) => {
+            expect(args.showPromptInstructions).toBe(false);
+            return { status: 'skipped', projectDir: args.projectDir };
+        });
+        const testIo = makeIo();
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: existingProjectDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+            showEntryMenu: true,
+        }, testIo.io, {
+            entryMenuDeps: { prompts: { select: vi.fn(async () => 'new-project'), cancel: vi.fn() } },
+            project: { prompts: projectPrompts },
+            model,
+        })).resolves.toBe(0);
+        expect(testIo.stdout()).toContain(`Project: ${newProjectDir}\n`);
+        expect(testIo.stdout()).not.toContain('Use Up/Down to move, Enter to confirm the current selection, choose Back to return to the previous step, Ctrl+C to exit.');
+    });
+    it('runs the seeded demo when the first setup intent menu chooses packaged demo data', async () => {
+        const testIo = makeIo();
+        const demo = vi.fn(async (_args, _io) => 0);
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: false,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: false,
+            skipSources: false,
+            showEntryMenu: true,
+        }, testIo.io, { entryMenuDeps: { prompts: { select: vi.fn(async () => 'demo'), cancel: vi.fn() } }, demo })).resolves.toBe(0);
+        expect(demo).toHaveBeenCalledWith(expect.objectContaining({
+            command: 'seeded',
+            outputMode: 'viz',
+            inputMode: 'auto',
+        }), testIo.io);
+        expect(demo.mock.calls[0]?.[0].projectDir).toMatch(/ktx-demo-/);
+    });
+    it('creates a project through run mode when --new is selected', async () => {
+        const testIo = makeIo();
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io)).resolves.toBe(0);
+        await expect(stat(join(tempDir, 'ktx.yaml'))).resolves.toBeDefined();
+        expect(await readFile(join(tempDir, 'ktx.yaml'), 'utf-8')).toContain('completed_steps:');
+        expect(testIo.stdout()).toContain('KTX setup');
+        expect(testIo.stdout()).toContain(`Project: ${tempDir}`);
+        expect(testIo.stdout()).toContain('Project ready: yes');
+        expect(testIo.stderr()).toBe('');
+    });
+    it('returns nonzero when project selection is missing in no-input mode even when optional sections are skipped', async () => {
+        const testIo = makeIo();
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io)).resolves.toBe(1);
+        expect(testIo.stderr()).toContain('Missing setup choice');
+        await expect(stat(join(tempDir, 'ktx.yaml'))).rejects.toThrow();
+    });
+    it('returns nonzero when project selection is missing in non-interactive setup', async () => {
+        const testIo = makeIo();
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io)).resolves.toBe(1);
+        expect(testIo.stderr()).toContain('Missing setup choice');
+        await expect(stat(join(tempDir, 'ktx.yaml'))).rejects.toThrow();
+    });
+    it('runs the Anthropic model step after project selection succeeds', async () => {
+        const testIo = makeIo();
+        const model = vi.fn(async () => ({ status: 'ready', projectDir: tempDir }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            anthropicApiKeyEnv: 'ANTHROPIC_API_KEY',
+            anthropicModel: 'claude-sonnet-4-6',
+            skipLlm: false,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io, { model })).resolves.toBe(0);
+        expect(model).toHaveBeenCalledWith(expect.objectContaining({
+            projectDir: tempDir,
+            inputMode: 'disabled',
+            anthropicApiKeyEnv: 'ANTHROPIC_API_KEY',
+            anthropicModel: 'claude-sonnet-4-6',
+            skipLlm: false,
+        }), testIo.io);
+    });
+    it('runs the embedding setup step after the model step succeeds', async () => {
+        const testIo = makeIo();
+        const model = vi.fn(async () => ({ status: 'ready', projectDir: tempDir }));
+        const embeddings = vi.fn(async () => ({ status: 'ready', projectDir: tempDir }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            anthropicApiKeyEnv: 'ANTHROPIC_API_KEY',
+            anthropicModel: 'claude-sonnet-4-6',
+            skipLlm: false,
+            embeddingBackend: 'openai',
+            embeddingApiKeyEnv: 'OPENAI_API_KEY',
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io, { model, embeddings })).resolves.toBe(0);
+        expect(embeddings).toHaveBeenCalledWith(expect.objectContaining({
+            projectDir: tempDir,
+            inputMode: 'disabled',
+            cliVersion: '0.2.0',
+            runtimeInstallPolicy: 'auto',
+            embeddingBackend: 'openai',
+            embeddingApiKeyEnv: 'OPENAI_API_KEY',
+            skipEmbeddings: false,
+        }), testIo.io);
+    });
+    it('passes no-input runtime policy to the embeddings step', async () => {
+        const io = makeIo();
+        const embeddings = vi.fn(async () => ({ status: 'failed', projectDir: tempDir }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            agentScope: 'project',
+            agentInstallMode: 'cli',
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, io.io, { embeddings })).resolves.toBe(1);
+        expect(embeddings).toHaveBeenCalledWith(expect.objectContaining({
+            cliVersion: '0.2.0',
+            runtimeInstallPolicy: 'never',
+        }), io.io);
+    });
+    it('lets Back from embedding setup return to the model step instead of exiting', async () => {
+        const testIo = makeIo();
+        const modelResults = [
+            { status: 'ready', projectDir: tempDir },
+            { status: 'back', projectDir: tempDir },
+        ];
+        const model = vi.fn(async () => modelResults.shift() ?? { status: 'back', projectDir: tempDir });
+        const embeddings = vi.fn(async () => ({ status: 'back', projectDir: tempDir }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+        }, testIo.io, { model, embeddings })).resolves.toBe(0);
+        expect(model).toHaveBeenCalledTimes(2);
+        expect(model).toHaveBeenNthCalledWith(2, expect.objectContaining({ forcePrompt: true }), testIo.io);
+        expect(embeddings).toHaveBeenCalledTimes(1);
+    });
+    it('lets Back from database selection return to embedding setup after an empty selection warning', async () => {
+        const testIo = makeIo();
+        const modelResults = [
+            { status: 'ready', projectDir: tempDir },
+            { status: 'back', projectDir: tempDir },
+        ];
+        const model = vi.fn(async () => modelResults.shift() ?? { status: 'back', projectDir: tempDir });
+        const embeddingResults = [
+            { status: 'ready', projectDir: tempDir },
+            { status: 'back', projectDir: tempDir },
+        ];
+        const embeddings = vi.fn(async () => embeddingResults.shift() ?? { status: 'back', projectDir: tempDir });
+        const databaseMultiselectValues = [[], ['back']];
+        const databasePrompts = {
+            multiselect: vi.fn(async () => databaseMultiselectValues.shift() ?? ['back']),
+            select: vi.fn(async () => 'back'),
+            text: vi.fn(),
+            password: vi.fn(),
+            cancel: vi.fn(),
+        };
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: false,
+            skipSources: true,
+        }, testIo.io, {
+            model,
+            embeddings,
+            databasesDeps: { prompts: databasePrompts },
+        })).resolves.toBe(0);
+        expect(databasePrompts.select).not.toHaveBeenCalled();
+        expect(testIo.stdout()).toContain('KTX cannot work without at least one primary source. Select a source or press Escape to go back.');
+        expect(embeddings).toHaveBeenCalledTimes(2);
+        expect(embeddings).toHaveBeenNthCalledWith(2, expect.objectContaining({ forcePrompt: true }), testIo.io);
+        expect(testIo.stderr()).not.toContain('No primary sources selected.');
+    });
+    it('lets Back from the first setup step return to the entry menu instead of exiting', async () => {
+        await writeFile(join(tempDir, 'ktx.yaml'), 'project: test\nconnections: {}\n', 'utf-8');
+        const testIo = makeIo();
+        const entryChoices = ['setup', 'exit'];
+        const entryPrompts = {
+            select: vi.fn(async () => entryChoices.shift() ?? 'exit'),
+            cancel: vi.fn(),
+        };
+        const model = vi.fn(async () => ({ status: 'back', projectDir: tempDir }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'auto',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: true,
+            databaseSchemas: [],
+            skipDatabases: true,
+            skipSources: true,
+            showEntryMenu: true,
+        }, testIo.io, {
+            entryMenuDeps: { prompts: entryPrompts },
+            model,
+        })).resolves.toBe(0);
+        expect(entryPrompts.select).toHaveBeenCalledTimes(2);
+        expect(entryPrompts.cancel).toHaveBeenCalledWith('Setup cancelled.');
+        expect(model).toHaveBeenCalledTimes(1);
+    });
+    it('runs database setup after embeddings succeed', async () => {
+        const testIo = makeIo();
+        const model = vi.fn(async () => ({ status: 'ready', projectDir: tempDir }));
+        const embeddings = vi.fn(async () => ({ status: 'ready', projectDir: tempDir }));
+        const databases = vi.fn(async () => ({
+            status: 'ready',
+            projectDir: tempDir,
+            connectionIds: ['warehouse'],
+        }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            anthropicApiKeyEnv: 'ANTHROPIC_API_KEY',
+            anthropicModel: 'claude-sonnet-4-6',
+            skipLlm: false,
+            embeddingBackend: 'openai',
+            embeddingApiKeyEnv: 'OPENAI_API_KEY',
+            skipEmbeddings: false,
+            databaseDrivers: ['postgres'],
+            databaseConnectionId: 'warehouse',
+            databaseUrl: 'env:DATABASE_URL',
+            databaseSchemas: ['public'],
+            skipDatabases: false,
+            skipSources: true,
+        }, testIo.io, { model, embeddings, databases })).resolves.toBe(0);
+        expect(databases).toHaveBeenCalledWith(expect.objectContaining({
+            projectDir: tempDir,
+            inputMode: 'disabled',
+            databaseDrivers: ['postgres'],
+            databaseConnectionId: 'warehouse',
+            databaseUrl: 'env:DATABASE_URL',
+            databaseSchemas: ['public'],
+            skipDatabases: false,
+        }), testIo.io);
+    });
+    it('runs sources after database setup', async () => {
+        const calls = [];
+        const io = makeIo();
+        await writeFile(join(tempDir, 'ktx.yaml'), ['project: revenue', 'connections: {}', ''].join('\n'), 'utf-8');
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'existing',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            skipDatabases: true,
+            skipSources: true,
+            databaseSchemas: [],
+        }, io.io, {
+            model: async () => {
+                calls.push('model');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            embeddings: async () => {
+                calls.push('embeddings');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            databases: async () => {
+                calls.push('databases');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            sources: async (args) => {
+                expect(args.runInitialSourceIngest).toBe(false);
+                calls.push('sources');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+        })).resolves.toBe(0);
+        expect(calls).toEqual(['model', 'embeddings', 'databases', 'sources']);
+    });
+    it('runs context after sources and before agents in full setup', async () => {
+        const calls = [];
+        const io = makeIo();
+        await writeFile(join(tempDir, 'ktx.yaml'), ['project: revenue', 'connections: {}', ''].join('\n'), 'utf-8');
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'existing',
+            agents: false,
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            skipDatabases: true,
+            skipSources: true,
+            skipAgents: false,
+            databaseSchemas: [],
+        }, io.io, {
+            model: async () => {
+                calls.push('model');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            embeddings: async () => {
+                calls.push('embeddings');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            databases: async () => {
+                calls.push('databases');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            sources: async () => {
+                calls.push('sources');
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            context: async () => {
+                calls.push('context');
+                return { status: 'ready', projectDir: tempDir, runId: 'setup-context-local-test' };
+            },
+            agents: async () => {
+                calls.push('agents');
+                return {
+                    status: 'ready',
+                    projectDir: tempDir,
+                    installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+                };
+            },
+        })).resolves.toBe(0);
+        expect(calls).toEqual(['model', 'embeddings', 'databases', 'sources', 'context', 'agents']);
+    });
+    it('runs agent setup after context succeeds in --agents mode', async () => {
+        const calls = [];
+        const io = makeIo();
+        await writeFile(join(tempDir, 'ktx.yaml'), ['project: revenue', 'connections: {}', ''].join('\n'), 'utf-8');
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'existing',
+            agents: true,
+            target: 'codex',
+            agentScope: 'project',
+            agentInstallMode: 'cli',
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            skipDatabases: true,
+            skipSources: true,
+            skipAgents: false,
+            databaseSchemas: [],
+        }, io.io, {
+            model: async () => ({ status: 'skipped', projectDir: tempDir }),
+            embeddings: async () => ({ status: 'skipped', projectDir: tempDir }),
+            databases: async () => ({ status: 'skipped', projectDir: tempDir }),
+            sources: async () => ({ status: 'skipped', projectDir: tempDir }),
+            context: async () => {
+                calls.push('context');
+                return { status: 'ready', projectDir: tempDir, runId: 'setup-context-local-test' };
+            },
+            agents: async () => {
+                calls.push('agents');
+                return {
+                    status: 'ready',
+                    projectDir: tempDir,
+                    installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+                };
+            },
+        })).resolves.toBe(0);
+        expect(calls).toEqual(['context', 'agents']);
+    });
+    it('does not install agents when non-interactive --agents finds context incomplete', async () => {
+        const io = makeIo();
+        const agents = vi.fn(async () => ({
+            status: 'ready',
+            projectDir: tempDir,
+            installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+        }));
+        await writeFile(join(tempDir, 'ktx.yaml'), ['project: revenue', 'connections: {}', ''].join('\n'), 'utf-8');
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'existing',
+            agents: true,
+            target: 'codex',
+            agentScope: 'project',
+            agentInstallMode: 'cli',
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            skipDatabases: true,
+            skipSources: true,
+            skipAgents: false,
+            databaseSchemas: [],
+        }, io.io, {
+            context: async () => ({ status: 'skipped', projectDir: tempDir }),
+            agents,
+        })).resolves.toBe(1);
+        expect(agents).not.toHaveBeenCalled();
+        expect(io.stderr()).toContain('KTX context is not ready for agents.');
+    });
+    it('does not install agents when full setup context build is detached', async () => {
+        const calls = [];
+        const io = makeIo();
+        await writeFile(join(tempDir, 'ktx.yaml'), ['project: revenue', 'connections: {}', ''].join('\n'), 'utf-8');
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'existing',
+            agents: false,
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: true,
+            skipEmbeddings: true,
+            skipDatabases: true,
+            skipSources: true,
+            skipAgents: false,
+            databaseSchemas: [],
+        }, io.io, {
+            context: async () => {
+                calls.push('context');
+                return { status: 'detached', projectDir: tempDir, runId: 'setup-context-local-test' };
+            },
+            agents: async () => {
+                calls.push('agents');
+                return {
+                    status: 'ready',
+                    projectDir: tempDir,
+                    installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+                };
+            },
+        })).resolves.toBe(0);
+        expect(calls).toEqual(['context']);
+    });
+    it('routes a ready project menu selection to agent setup', async () => {
+        const calls = [];
+        const io = makeIo();
+        await mkdir(join(tempDir, '.ktx', 'agents'), { recursive: true });
+        await writeFile(join(tempDir, 'ktx.yaml'), [
+            'project: revenue',
+            'setup:',
+            '  completed_steps:',
+            '    - project',
+            '    - llm',
+            '    - embeddings',
+            '    - sources',
+            '    - context',
+            '    - agents',
+            '  database_connection_ids: []',
+            'connections: {}',
+            'llm:',
+            '  provider:',
+            '    backend: anthropic',
+            '  models:',
+            '    default: claude-sonnet-4-6',
+            'ingest:',
+            '  embeddings:',
+            '    backend: openai',
+            '    model: text-embedding-3-small',
+            '    dimensions: 1536',
+            '',
+        ].join('\n'), 'utf-8');
+        await writeFile(join(tempDir, '.ktx/agents/install-manifest.json'), JSON.stringify({
+            version: 1,
+            projectDir: tempDir,
+            installedAt: '2026-05-07T00:00:00.000Z',
+            installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+            entries: [],
+        }, null, 2), 'utf-8');
+        await writeKtxSetupContextState(tempDir, {
+            runId: 'setup-context-local-ready',
+            status: 'completed',
+            startedAt: '2026-05-09T10:00:00.000Z',
+            updatedAt: '2026-05-09T10:02:00.000Z',
+            completedAt: '2026-05-09T10:02:00.000Z',
+            primarySourceConnectionIds: [],
+            contextSourceConnectionIds: [],
+            reportIds: [],
+            artifactPaths: [],
+            retryableFailedTargets: [],
+            commands: contextBuildCommands(tempDir, 'setup-context-local-ready'),
+        });
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'existing',
+            agents: false,
+            inputMode: 'auto',
+            yes: false,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            skipDatabases: false,
+            skipSources: false,
+            skipAgents: false,
+            databaseSchemas: [],
+        }, io.io, {
+            readyMenuDeps: { prompts: { select: vi.fn(async () => 'agents'), cancel: vi.fn() } },
+            model: async (args) => {
+                expect(args.skipLlm).toBe(true);
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            embeddings: async (args) => {
+                expect(args.skipEmbeddings).toBe(true);
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            databases: async (args) => {
+                expect(args.skipDatabases).toBe(true);
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            sources: async (args) => {
+                expect(args.skipSources).toBe(true);
+                return { status: 'skipped', projectDir: tempDir };
+            },
+            agents: async () => {
+                calls.push('agents');
+                return {
+                    status: 'ready',
+                    projectDir: tempDir,
+                    installs: [{ target: 'codex', scope: 'project', mode: 'cli' }],
+                };
+            },
+        })).resolves.toBe(0);
+        expect(calls).toEqual(['agents']);
+    });
+    it('runs only project resolution, context gate, and agent setup in --agents mode', async () => {
+        const io = makeIo();
+        const context = vi.fn(async () => ({ status: 'ready', projectDir: tempDir, runId: 'setup-context-local-test' }));
+        const agents = vi.fn(async () => ({
+            status: 'ready',
+            projectDir: tempDir,
+            installs: [{ target: 'universal', scope: 'project', mode: 'both' }],
+        }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: true,
+            target: 'universal',
+            agentScope: 'project',
+            agentInstallMode: 'both',
+            inputMode: 'disabled',
+            yes: true,
+            cliVersion: '0.2.0',
+            skipLlm: false,
+            skipEmbeddings: false,
+            skipDatabases: false,
+            skipSources: false,
+            skipAgents: false,
+            databaseSchemas: [],
+        }, io.io, {
+            model: async () => {
+                throw new Error('model should not run');
+            },
+            context,
+            agents,
+        })).resolves.toBe(0);
+        expect(context).toHaveBeenCalledTimes(1);
+        expect(agents).toHaveBeenCalledTimes(1);
+    });
+    it('removes agent integrations through setup remove command', async () => {
+        const io = makeIo();
+        const removeAgents = vi.fn(async () => 0);
+        await expect(runKtxSetup({ command: 'remove-agents', projectDir: tempDir }, io.io, { removeAgents })).resolves.toBe(0);
+        expect(removeAgents).toHaveBeenCalledWith(tempDir, io.io);
+    });
+    it('does not run embedding setup when the model step fails', async () => {
+        const testIo = makeIo();
+        const model = vi.fn(async () => ({ status: 'failed', projectDir: tempDir }));
+        const embeddings = vi.fn(async () => ({ status: 'ready', projectDir: tempDir }));
+        await expect(runKtxSetup({
+            command: 'run',
+            projectDir: tempDir,
+            mode: 'new',
+            agents: false,
+            skipAgents: true,
+            inputMode: 'disabled',
+            yes: false,
+            cliVersion: '0.2.0',
+            anthropicApiKeyEnv: 'ANTHROPIC_API_KEY',
+            anthropicModel: 'claude-sonnet-4-6',
+            skipLlm: false,
+            skipEmbeddings: false,
+            databaseSchemas: [],
+            skipDatabases: true,
+        }, testIo.io, { model, embeddings })).resolves.toBe(1);
+        expect(embeddings).not.toHaveBeenCalled();
+    });
+});