@jbrowse/react-app2 3.7.0 → 4.0.1

package/dist/createViewState.d.ts

@@ -1,1684 +0,0 @@
-import type { Config } from './types';
-import type { PluginConstructor } from '@jbrowse/core/Plugin';
-import type { IJsonPatch } from 'mobx-state-tree';
-export default function createViewState(opts: {
-    config: Config;
-    plugins?: PluginConstructor[];
-    onChange?: (patch: IJsonPatch, reversePatch: IJsonPatch) => void;
-    makeWorkerInstance?: () => Worker;
-}): {
-    jbrowse: any;
-    session: any;
-    sessionPath: string;
-    assemblyManager: {
-        assemblies: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-        readonly assemblyNameMap: Record<string, {
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    } & {
-        getCanonicalAssemblyName(asmName: string): string | undefined;
-        getCanonicalAssemblyName2(asmName: string): string;
-        get(asmName: string): ({
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-        readonly assemblyNamesList: any[];
-        readonly assemblyList: import("@jbrowse/core/configuration").AnyConfigurationModel[];
-        readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    } & {
-        waitForAssembly(assemblyName: string): Promise<({
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined>;
-        getRefNameMapForAdapter(adapterConf: {
-            [x: string]: unknown;
-        }, assemblyName: string | undefined, opts: {
-            stopToken?: string;
-            sessionId: string;
-        }): Promise<{
-            [x: string]: string;
-        } | undefined>;
-        getReverseRefNameMapForAdapter(adapterConf: {
-            [x: string]: unknown;
-        }, assemblyName: string | undefined, opts: {
-            stopToken?: string;
-            sessionId: string;
-        }): Promise<{
-            [x: string]: string;
-        } | undefined>;
-        isValidRefName(refName: string, assemblyName: string): boolean;
-    } & {
-        afterAttach(): void;
-        removeAssembly(asm: import("@jbrowse/core/assemblyManager/assembly").Assembly): void;
-        addAssembly(configuration: any): void;
-    } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
-        assemblies: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    }, {
-        readonly assemblyNameMap: Record<string, {
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    } & {
-        getCanonicalAssemblyName(asmName: string): string | undefined;
-        getCanonicalAssemblyName2(asmName: string): string;
-        get(asmName: string): ({
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-        readonly assemblyNamesList: any[];
-        readonly assemblyList: import("@jbrowse/core/configuration").AnyConfigurationModel[];
-        readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    } & {
-        waitForAssembly(assemblyName: string): Promise<({
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined>;
-        getRefNameMapForAdapter(adapterConf: {
-            [x: string]: unknown;
-        }, assemblyName: string | undefined, opts: {
-            stopToken?: string;
-            sessionId: string;
-        }): Promise<{
-            [x: string]: string;
-        } | undefined>;
-        getReverseRefNameMapForAdapter(adapterConf: {
-            [x: string]: unknown;
-        }, assemblyName: string | undefined, opts: {
-            stopToken?: string;
-            sessionId: string;
-        }): Promise<{
-            [x: string]: string;
-        } | undefined>;
-        isValidRefName(refName: string, assemblyName: string): boolean;
-    } & {
-        afterAttach(): void;
-        removeAssembly(asm: import("@jbrowse/core/assemblyManager/assembly").Assembly): void;
-        addAssembly(configuration: any): void;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>>;
-    internetAccounts: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
-} & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-    rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    adminMode: boolean;
-    error: unknown;
-    textSearchManager: import("@jbrowse/core/util").TextSearchManager;
-    pluginManager: import("@jbrowse/core/PluginManager").default;
-} & {
-    setError(error: unknown): void;
-    setSession(sessionSnapshot?: import("mobx-state-tree").SnapshotIn<import("mobx-state-tree").IAnyType>): void;
-    setDefaultSession(): void;
-    setSessionPath(path: string): void;
-    renameCurrentSession(newName: string): void;
-} & {
-    initializeInternetAccount(internetAccountConfig: import("@jbrowse/core/configuration").AnyConfigurationModel, initialSnapshot?: {}): any;
-    createEphemeralInternetAccount(internetAccountId: string, initialSnapshot: Record<string, unknown>, url: string): any;
-    findAppropriateInternetAccount(location: import("@jbrowse/core/util").UriLocation): any;
-} & {
-    afterCreate(): void;
-} & {
-    mutableMenuActions: import("@jbrowse/app-core").MenuAction[];
-} & {
-    setMenus(newMenus: import("@jbrowse/app-core").Menu[]): void;
-    appendMenu(menuName: string): void;
-    insertMenu(menuName: string, position: number): void;
-    appendToMenu(menuName: string, menuItem: import("@jbrowse/core/ui").MenuItem): void;
-    insertInMenu(menuName: string, menuItem: import("@jbrowse/core/ui").MenuItem, position: number): void;
-    appendToSubMenu(menuPath: string[], menuItem: import("@jbrowse/core/ui").MenuItem): void;
-    insertInSubMenu(menuPath: string[], menuItem: import("@jbrowse/core/ui").MenuItem, position: number): void;
-} & {
-    version: string;
-    pluginsUpdated: boolean;
-    rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    textSearchManager: import("@jbrowse/core/util").TextSearchManager;
-    error: unknown;
-} & {
-    afterCreate(): void;
-    setSession(sessionSnapshot?: import("mobx-state-tree").SnapshotIn<import("@jbrowse/product-core").BaseSessionType>): void;
-    setPluginsUpdated(flag: boolean): void;
-    setDefaultSession(): void;
-    renameCurrentSession(sessionName: string): void;
-    setError(error?: unknown): void;
-} & {
-    menus(): import("@jbrowse/app-core").Menu[];
-} & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-    jbrowse: import("mobx-state-tree").IAnyType;
-    session: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IAnyType>;
-    sessionPath: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-    assemblyManager: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
-        assemblies: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-    }, {
-        readonly assemblyNameMap: Record<string, {
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
-    } & {
-        getCanonicalAssemblyName(asmName: string): string | undefined;
-        getCanonicalAssemblyName2(asmName: string): string;
-        get(asmName: string): ({
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
-        readonly assemblyNamesList: any[];
-        readonly assemblyList: import("@jbrowse/core/configuration").AnyConfigurationModel[];
-        readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    } & {
-        waitForAssembly(assemblyName: string): Promise<({
-            configuration: any;
-        } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
-        }, {
-            error: unknown;
-            loadingP: Promise<void> | undefined;
-            volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            refNameAliases: {
-                [x: string]: string;
-            } | undefined;
-            cytobands: import("@jbrowse/core/util").Feature[] | undefined;
-        } & {
-            getConf(arg: string): any;
-            readonly lowerCaseRefNameAliases: {
-                [k: string]: string;
-            } | undefined;
-        } & {
-            readonly initialized: boolean;
-            readonly name: string;
-            readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
-            readonly aliases: string[];
-            readonly displayName: string;
-            hasName(name: string): boolean;
-            readonly allAliases: string[];
-            readonly allRefNames: string[] | undefined;
-            readonly lowerCaseRefNames: string[] | undefined;
-            readonly allRefNamesWithLowerCase: string[] | undefined;
-            readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-            readonly refNameColors: string[];
-        } & {
-            readonly refNames: string[] | undefined;
-        } & {
-            getCanonicalRefName(refName: string): string | undefined;
-            getCanonicalRefName2(asmName: string): string;
-            getRefNameColor(refName: string): string | undefined;
-            isValidRefName(refName: string): boolean;
-        } & {
-            setLoaded({ regions, refNameAliases, cytobands, }: {
-                regions: import("@jbrowse/core/util").Region[];
-                refNameAliases: {
-                    [x: string]: string;
-                };
-                cytobands: import("@jbrowse/core/util").Feature[];
-            }): void;
-            setError(e: unknown): void;
-            setRegions(regions: import("@jbrowse/core/util").Region[]): void;
-            setRefNameAliases(aliases: {
-                [x: string]: string;
-            }): void;
-            setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
-            setLoadingP(p?: Promise<void>): void;
-            load(): Promise<void>;
-            loadPre(): Promise<void>;
-        } & {
-            getAdapterMapEntry(adapterConf: {
-                [x: string]: unknown;
-            }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
-            getRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            getReverseRefNameMapForAdapter(adapterConf: {
-                [x: string]: unknown;
-            }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
-                [x: string]: string;
-            }>;
-            afterCreate(): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined>;
-        getRefNameMapForAdapter(adapterConf: {
-            [x: string]: unknown;
-        }, assemblyName: string | undefined, opts: {
-            stopToken?: string;
-            sessionId: string;
-        }): Promise<{
-            [x: string]: string;
-        } | undefined>;
-        getReverseRefNameMapForAdapter(adapterConf: {
-            [x: string]: unknown;
-        }, assemblyName: string | undefined, opts: {
-            stopToken?: string;
-            sessionId: string;
-        }): Promise<{
-            [x: string]: string;
-        } | undefined>;
-        isValidRefName(refName: string, assemblyName: string): boolean;
-    } & {
-        afterAttach(): void;
-        removeAssembly(asm: import("@jbrowse/core/assemblyManager/assembly").Assembly): void;
-        addAssembly(configuration: any): void;
-    }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
-} & {
-    internetAccounts: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
-}, {
-    rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    adminMode: boolean;
-    error: unknown;
-    textSearchManager: import("@jbrowse/core/util").TextSearchManager;
-    pluginManager: import("@jbrowse/core/PluginManager").default;
-} & {
-    setError(error: unknown): void;
-    setSession(sessionSnapshot?: import("mobx-state-tree").SnapshotIn<import("mobx-state-tree").IAnyType>): void;
-    setDefaultSession(): void;
-    setSessionPath(path: string): void;
-    renameCurrentSession(newName: string): void;
-} & {
-    initializeInternetAccount(internetAccountConfig: import("@jbrowse/core/configuration").AnyConfigurationModel, initialSnapshot?: {}): any;
-    createEphemeralInternetAccount(internetAccountId: string, initialSnapshot: Record<string, unknown>, url: string): any;
-    findAppropriateInternetAccount(location: import("@jbrowse/core/util").UriLocation): any;
-} & {
-    afterCreate(): void;
-} & {
-    mutableMenuActions: import("@jbrowse/app-core").MenuAction[];
-} & {
-    setMenus(newMenus: import("@jbrowse/app-core").Menu[]): void;
-    appendMenu(menuName: string): void;
-    insertMenu(menuName: string, position: number): void;
-    appendToMenu(menuName: string, menuItem: import("@jbrowse/core/ui").MenuItem): void;
-    insertInMenu(menuName: string, menuItem: import("@jbrowse/core/ui").MenuItem, position: number): void;
-    appendToSubMenu(menuPath: string[], menuItem: import("@jbrowse/core/ui").MenuItem): void;
-    insertInSubMenu(menuPath: string[], menuItem: import("@jbrowse/core/ui").MenuItem, position: number): void;
-} & {
-    version: string;
-    pluginsUpdated: boolean;
-    rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
-    textSearchManager: import("@jbrowse/core/util").TextSearchManager;
-    error: unknown;
-} & {
-    afterCreate(): void;
-    setSession(sessionSnapshot?: import("mobx-state-tree").SnapshotIn<import("@jbrowse/product-core").BaseSessionType>): void;
-    setPluginsUpdated(flag: boolean): void;
-    setDefaultSession(): void;
-    renameCurrentSession(sessionName: string): void;
-    setError(error?: unknown): void;
-} & {
-    menus(): import("@jbrowse/app-core").Menu[];
-}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;