@jbrowse/product-core 2.12.0 → 2.12.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (30) hide show
  1. package/dist/RootModel/BaseRootModel.d.ts +14 -144
  2. package/dist/RootModel/BaseRootModel.js +2 -3
  3. package/dist/RootModel/FormatAbout.js +1 -2
  4. package/dist/RootModel/FormatDetails.js +1 -2
  5. package/dist/RootModel/HierarchicalConfig.js +1 -2
  6. package/dist/RootModel/InternetAccounts.js +1 -2
  7. package/dist/Session/BaseSession.d.ts +10 -8
  8. package/dist/Session/BaseSession.js +3 -4
  9. package/dist/Session/Connections.d.ts +29 -71
  10. package/dist/Session/Connections.js +2 -3
  11. package/dist/Session/DialogQueue.js +2 -3
  12. package/dist/Session/DrawerWidgets.js +2 -3
  13. package/dist/Session/MultipleViews.d.ts +84 -461
  14. package/dist/Session/MultipleViews.js +2 -3
  15. package/dist/Session/ReferenceManagement.js +2 -3
  16. package/dist/Session/SessionTracks.d.ts +69 -525
  17. package/dist/Session/SessionTracks.js +2 -3
  18. package/dist/Session/Themes.js +2 -3
  19. package/dist/Session/Tracks.d.ts +62 -535
  20. package/dist/Session/Tracks.js +2 -3
  21. package/dist/rpcWorker.js +1 -2
  22. package/dist/ui/AboutDialog.js +1 -2
  23. package/dist/ui/FileInfoPanel.js +1 -1
  24. package/esm/RootModel/BaseRootModel.d.ts +14 -144
  25. package/esm/Session/BaseSession.d.ts +10 -8
  26. package/esm/Session/Connections.d.ts +29 -71
  27. package/esm/Session/MultipleViews.d.ts +84 -461
  28. package/esm/Session/SessionTracks.d.ts +69 -525
  29. package/esm/Session/Tracks.d.ts +62 -535
  30. package/package.json +3 -3
package/dist/Session/SessionTracks.d.ts CHANGED
@@ -67,7 +67,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -129,7 +129,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -193,7 +193,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -255,7 +255,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -319,7 +319,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -381,7 +381,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -400,11 +400,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  }>;
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  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
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  readonly assemblyNamesList: any[];
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- readonly assemblyList: ({
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- [x: string]: any;
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- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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- setSubschema(slotName: string, data: unknown): any;
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- } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[];
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+ readonly assemblyList: AnyConfigurationModel[];
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  readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
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  } & {
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  waitForAssembly(assemblyName: string): Promise<({
@@ -452,7 +448,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -514,7 +510,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
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- setLoadingP(p?: Promise<void> | undefined): void;
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+ setLoadingP(p?: Promise<void>): void;
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  load(): Promise<void>;
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  loadPre(): Promise<void>;
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  } & {
@@ -535,7 +531,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  getRefNameMapForAdapter(adapterConf: {
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  [x: string]: unknown;
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  }, assemblyName: string | undefined, opts: {
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- signal?: AbortSignal | undefined;
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+ signal?: AbortSignal;
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  sessionId: string;
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  }): Promise<{
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  [x: string]: string | undefined;
@@ -543,7 +539,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  getReverseRefNameMapForAdapter(adapterConf: {
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  [x: string]: unknown;
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541
  }, assemblyName: string | undefined, opts: {
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- signal?: AbortSignal | undefined;
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+ signal?: AbortSignal;
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  sessionId: string;
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  }): Promise<{
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  [x: string]: string | undefined;
@@ -551,135 +547,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
551
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  isValidRefName(refName: string, assemblyName: string): boolean;
552
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  } & {
553
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  afterAttach(): void;
554
- removeAssembly(asm: {
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- configuration: any;
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- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
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- error: unknown; /**
558
- * #action
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- */
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- loaded: boolean;
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- loadingP: Promise<void> | undefined;
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- volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
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- refNameAliases: {
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- [x: string]: string | undefined;
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- } | undefined;
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- lowerCaseRefNameAliases: {
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- [x: string]: string | undefined;
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- } | undefined;
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- cytobands: import("@jbrowse/core/util").Feature[] | undefined;
570
- } & {
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- getConf(arg: string): any;
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- } & {
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- readonly initialized: boolean;
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- readonly name: string;
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- readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
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- readonly aliases: string[];
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- readonly displayName: string | undefined;
578
- hasName(name: string): boolean;
579
- readonly allAliases: string[];
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- readonly allRefNames: string[] | undefined;
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- readonly lowerCaseRefNames: string[] | undefined;
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- readonly allRefNamesWithLowerCase: string[] | undefined;
583
- readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
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- readonly refNameColors: string[];
585
- } & {
586
- readonly refNames: string[] | undefined;
587
- } & {
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- getCanonicalRefName(refName: string): string | undefined;
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- getRefNameColor(refName: string): string | undefined;
590
- isValidRefName(refName: string): boolean;
591
- } & {
592
- setLoaded({ adapterRegionsWithAssembly, refNameAliases, lowerCaseRefNameAliases, cytobands, }: import("@jbrowse/core/assemblyManager/assembly").Loading): void;
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- setError(e: unknown): void;
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- setRegions(regions: import("@jbrowse/core/util").Region[]): void;
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- setRefNameAliases(aliases: {
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- [x: string]: string | undefined;
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- }, lcAliases: {
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- [x: string]: string | undefined;
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- }): void;
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- setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
601
- setLoadingP(p?: Promise<void> | undefined): void;
602
- load(): Promise<void>;
603
- loadPre(): Promise<void>;
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- } & {
605
- getAdapterMapEntry(adapterConf: {
606
- [x: string]: unknown;
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- }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
608
- getRefNameMapForAdapter(adapterConf: {
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- [x: string]: unknown;
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- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
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- [x: string]: string | undefined;
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- }>;
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- getReverseRefNameMapForAdapter(adapterConf: {
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- [x: string]: unknown;
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- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
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- [x: string]: string | undefined;
617
- }>;
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- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
619
- configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
620
- }, {
621
- error: unknown; /**
622
- * #action
623
- */
624
- loaded: boolean;
625
- loadingP: Promise<void> | undefined;
626
- volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
627
- refNameAliases: {
628
- [x: string]: string | undefined;
629
- } | undefined;
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- lowerCaseRefNameAliases: {
631
- [x: string]: string | undefined;
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- } | undefined;
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- cytobands: import("@jbrowse/core/util").Feature[] | undefined;
634
- } & {
635
- getConf(arg: string): any;
636
- } & {
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- readonly initialized: boolean;
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- readonly name: string;
639
- readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
640
- readonly aliases: string[];
641
- readonly displayName: string | undefined;
642
- hasName(name: string): boolean;
643
- readonly allAliases: string[];
644
- readonly allRefNames: string[] | undefined;
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- readonly lowerCaseRefNames: string[] | undefined;
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- readonly allRefNamesWithLowerCase: string[] | undefined;
647
- readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
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- readonly refNameColors: string[];
649
- } & {
650
- readonly refNames: string[] | undefined;
651
- } & {
652
- getCanonicalRefName(refName: string): string | undefined;
653
- getRefNameColor(refName: string): string | undefined;
654
- isValidRefName(refName: string): boolean;
655
- } & {
656
- setLoaded({ adapterRegionsWithAssembly, refNameAliases, lowerCaseRefNameAliases, cytobands, }: import("@jbrowse/core/assemblyManager/assembly").Loading): void;
657
- setError(e: unknown): void;
658
- setRegions(regions: import("@jbrowse/core/util").Region[]): void;
659
- setRefNameAliases(aliases: {
660
- [x: string]: string | undefined;
661
- }, lcAliases: {
662
- [x: string]: string | undefined;
663
- }): void;
664
- setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
665
- setLoadingP(p?: Promise<void> | undefined): void;
666
- load(): Promise<void>;
667
- loadPre(): Promise<void>;
668
- } & {
669
- getAdapterMapEntry(adapterConf: {
670
- [x: string]: unknown;
671
- }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
672
- getRefNameMapForAdapter(adapterConf: {
673
- [x: string]: unknown;
674
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
675
- [x: string]: string | undefined;
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- }>;
677
- getReverseRefNameMapForAdapter(adapterConf: {
678
- [x: string]: unknown;
679
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
680
- [x: string]: string | undefined;
681
- }>;
682
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>): void;
550
+ removeAssembly(asm: import("@jbrowse/core/assemblyManager/assembly").Assembly): void;
683
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  addAssembly(configuration: any): void;
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  replaceAssembly(idx: number, configuration: any): void;
685
553
  } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
@@ -728,7 +596,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
728
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  [x: string]: string | undefined;
729
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  }): void;
730
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
731
- setLoadingP(p?: Promise<void> | undefined): void;
599
+ setLoadingP(p?: Promise<void>): void;
732
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  load(): Promise<void>;
733
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  loadPre(): Promise<void>;
734
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  } & {
@@ -792,7 +660,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
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  }): void;
794
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
795
- setLoadingP(p?: Promise<void> | undefined): void;
663
+ setLoadingP(p?: Promise<void>): void;
796
664
  load(): Promise<void>;
797
665
  loadPre(): Promise<void>;
798
666
  } & {
@@ -854,7 +722,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
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  [x: string]: string | undefined;
855
723
  }): void;
856
724
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
857
- setLoadingP(p?: Promise<void> | undefined): void;
725
+ setLoadingP(p?: Promise<void>): void;
858
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  load(): Promise<void>;
859
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  loadPre(): Promise<void>;
860
728
  } & {
@@ -918,7 +786,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
918
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  [x: string]: string | undefined;
919
787
  }): void;
920
788
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
921
- setLoadingP(p?: Promise<void> | undefined): void;
789
+ setLoadingP(p?: Promise<void>): void;
922
790
  load(): Promise<void>;
923
791
  loadPre(): Promise<void>;
924
792
  } & {
@@ -980,7 +848,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
980
848
  [x: string]: string | undefined;
981
849
  }): void;
982
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  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
983
- setLoadingP(p?: Promise<void> | undefined): void;
851
+ setLoadingP(p?: Promise<void>): void;
984
852
  load(): Promise<void>;
985
853
  loadPre(): Promise<void>;
986
854
  } & {
@@ -999,11 +867,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
999
867
  }>;
1000
868
  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
1001
869
  readonly assemblyNamesList: any[];
1002
- readonly assemblyList: ({
1003
- [x: string]: any;
1004
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1005
- setSubschema(slotName: string, data: unknown): any;
1006
- } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[];
870
+ readonly assemblyList: AnyConfigurationModel[];
1007
871
  readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
1008
872
  } & {
1009
873
  waitForAssembly(assemblyName: string): Promise<({
@@ -1051,7 +915,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1051
915
  [x: string]: string | undefined;
1052
916
  }): void;
1053
917
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1054
- setLoadingP(p?: Promise<void> | undefined): void;
918
+ setLoadingP(p?: Promise<void>): void;
1055
919
  load(): Promise<void>;
1056
920
  loadPre(): Promise<void>;
1057
921
  } & {
@@ -1113,7 +977,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1113
977
  [x: string]: string | undefined;
1114
978
  }): void;
1115
979
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1116
- setLoadingP(p?: Promise<void> | undefined): void;
980
+ setLoadingP(p?: Promise<void>): void;
1117
981
  load(): Promise<void>;
1118
982
  loadPre(): Promise<void>;
1119
983
  } & {
@@ -1134,7 +998,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1134
998
  getRefNameMapForAdapter(adapterConf: {
1135
999
  [x: string]: unknown;
1136
1000
  }, assemblyName: string | undefined, opts: {
1137
- signal?: AbortSignal | undefined;
1001
+ signal?: AbortSignal;
1138
1002
  sessionId: string;
1139
1003
  }): Promise<{
1140
1004
  [x: string]: string | undefined;
@@ -1142,7 +1006,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1142
1006
  getReverseRefNameMapForAdapter(adapterConf: {
1143
1007
  [x: string]: unknown;
1144
1008
  }, assemblyName: string | undefined, opts: {
1145
- signal?: AbortSignal | undefined;
1009
+ signal?: AbortSignal;
1146
1010
  sessionId: string;
1147
1011
  }): Promise<{
1148
1012
  [x: string]: string | undefined;
@@ -1150,135 +1014,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1150
1014
  isValidRefName(refName: string, assemblyName: string): boolean;
1151
1015
  } & {
1152
1016
  afterAttach(): void;
1153
- removeAssembly(asm: {
1154
- configuration: any;
1155
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1156
- error: unknown; /**
1157
- * #action
1158
- */
1159
- loaded: boolean;
1160
- loadingP: Promise<void> | undefined;
1161
- volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1162
- refNameAliases: {
1163
- [x: string]: string | undefined;
1164
- } | undefined;
1165
- lowerCaseRefNameAliases: {
1166
- [x: string]: string | undefined;
1167
- } | undefined;
1168
- cytobands: import("@jbrowse/core/util").Feature[] | undefined;
1169
- } & {
1170
- getConf(arg: string): any;
1171
- } & {
1172
- readonly initialized: boolean;
1173
- readonly name: string;
1174
- readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1175
- readonly aliases: string[];
1176
- readonly displayName: string | undefined;
1177
- hasName(name: string): boolean;
1178
- readonly allAliases: string[];
1179
- readonly allRefNames: string[] | undefined;
1180
- readonly lowerCaseRefNames: string[] | undefined;
1181
- readonly allRefNamesWithLowerCase: string[] | undefined;
1182
- readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
1183
- readonly refNameColors: string[];
1184
- } & {
1185
- readonly refNames: string[] | undefined;
1186
- } & {
1187
- getCanonicalRefName(refName: string): string | undefined;
1188
- getRefNameColor(refName: string): string | undefined;
1189
- isValidRefName(refName: string): boolean;
1190
- } & {
1191
- setLoaded({ adapterRegionsWithAssembly, refNameAliases, lowerCaseRefNameAliases, cytobands, }: import("@jbrowse/core/assemblyManager/assembly").Loading): void;
1192
- setError(e: unknown): void;
1193
- setRegions(regions: import("@jbrowse/core/util").Region[]): void;
1194
- setRefNameAliases(aliases: {
1195
- [x: string]: string | undefined;
1196
- }, lcAliases: {
1197
- [x: string]: string | undefined;
1198
- }): void;
1199
- setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1200
- setLoadingP(p?: Promise<void> | undefined): void;
1201
- load(): Promise<void>;
1202
- loadPre(): Promise<void>;
1203
- } & {
1204
- getAdapterMapEntry(adapterConf: {
1205
- [x: string]: unknown;
1206
- }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
1207
- getRefNameMapForAdapter(adapterConf: {
1208
- [x: string]: unknown;
1209
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1210
- [x: string]: string | undefined;
1211
- }>;
1212
- getReverseRefNameMapForAdapter(adapterConf: {
1213
- [x: string]: unknown;
1214
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1215
- [x: string]: string | undefined;
1216
- }>;
1217
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
1218
- configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
1219
- }, {
1220
- error: unknown; /**
1221
- * #action
1222
- */
1223
- loaded: boolean;
1224
- loadingP: Promise<void> | undefined;
1225
- volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1226
- refNameAliases: {
1227
- [x: string]: string | undefined;
1228
- } | undefined;
1229
- lowerCaseRefNameAliases: {
1230
- [x: string]: string | undefined;
1231
- } | undefined;
1232
- cytobands: import("@jbrowse/core/util").Feature[] | undefined;
1233
- } & {
1234
- getConf(arg: string): any;
1235
- } & {
1236
- readonly initialized: boolean;
1237
- readonly name: string;
1238
- readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1239
- readonly aliases: string[];
1240
- readonly displayName: string | undefined;
1241
- hasName(name: string): boolean;
1242
- readonly allAliases: string[];
1243
- readonly allRefNames: string[] | undefined;
1244
- readonly lowerCaseRefNames: string[] | undefined;
1245
- readonly allRefNamesWithLowerCase: string[] | undefined;
1246
- readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
1247
- readonly refNameColors: string[];
1248
- } & {
1249
- readonly refNames: string[] | undefined;
1250
- } & {
1251
- getCanonicalRefName(refName: string): string | undefined;
1252
- getRefNameColor(refName: string): string | undefined;
1253
- isValidRefName(refName: string): boolean;
1254
- } & {
1255
- setLoaded({ adapterRegionsWithAssembly, refNameAliases, lowerCaseRefNameAliases, cytobands, }: import("@jbrowse/core/assemblyManager/assembly").Loading): void;
1256
- setError(e: unknown): void;
1257
- setRegions(regions: import("@jbrowse/core/util").Region[]): void;
1258
- setRefNameAliases(aliases: {
1259
- [x: string]: string | undefined;
1260
- }, lcAliases: {
1261
- [x: string]: string | undefined;
1262
- }): void;
1263
- setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1264
- setLoadingP(p?: Promise<void> | undefined): void;
1265
- load(): Promise<void>;
1266
- loadPre(): Promise<void>;
1267
- } & {
1268
- getAdapterMapEntry(adapterConf: {
1269
- [x: string]: unknown;
1270
- }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
1271
- getRefNameMapForAdapter(adapterConf: {
1272
- [x: string]: unknown;
1273
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1274
- [x: string]: string | undefined;
1275
- }>;
1276
- getReverseRefNameMapForAdapter(adapterConf: {
1277
- [x: string]: unknown;
1278
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1279
- [x: string]: string | undefined;
1280
- }>;
1281
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>): void;
1017
+ removeAssembly(asm: import("@jbrowse/core/assemblyManager/assembly").Assembly): void;
1282
1018
  addAssembly(configuration: any): void;
1283
1019
  replaceAssembly(idx: number, configuration: any): void;
1284
1020
  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>>;
@@ -1290,7 +1026,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1290
1026
  pluginManager: PluginManager;
1291
1027
  } & {
1292
1028
  setError(error: unknown): void;
1293
- setSession(sessionSnapshot?: any): void;
1029
+ setSession(sessionSnapshot?: import("mobx-state-tree").SnapshotIn<import("mobx-state-tree").IAnyType>): void;
1294
1030
  setDefaultSession(): void;
1295
1031
  setSessionPath(path: string): void;
1296
1032
  renameCurrentSession(newName: string): void;
@@ -1344,7 +1080,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1344
1080
  [x: string]: string | undefined;
1345
1081
  }): void;
1346
1082
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1347
- setLoadingP(p?: Promise<void> | undefined): void;
1083
+ setLoadingP(p?: Promise<void>): void;
1348
1084
  load(): Promise<void>;
1349
1085
  loadPre(): Promise<void>;
1350
1086
  } & {
@@ -1408,7 +1144,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1408
1144
  [x: string]: string | undefined;
1409
1145
  }): void;
1410
1146
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1411
- setLoadingP(p?: Promise<void> | undefined): void;
1147
+ setLoadingP(p?: Promise<void>): void;
1412
1148
  load(): Promise<void>;
1413
1149
  loadPre(): Promise<void>;
1414
1150
  } & {
@@ -1470,7 +1206,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1470
1206
  [x: string]: string | undefined;
1471
1207
  }): void;
1472
1208
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1473
- setLoadingP(p?: Promise<void> | undefined): void;
1209
+ setLoadingP(p?: Promise<void>): void;
1474
1210
  load(): Promise<void>;
1475
1211
  loadPre(): Promise<void>;
1476
1212
  } & {
@@ -1534,7 +1270,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1534
1270
  [x: string]: string | undefined;
1535
1271
  }): void;
1536
1272
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1537
- setLoadingP(p?: Promise<void> | undefined): void;
1273
+ setLoadingP(p?: Promise<void>): void;
1538
1274
  load(): Promise<void>;
1539
1275
  loadPre(): Promise<void>;
1540
1276
  } & {
@@ -1596,7 +1332,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1596
1332
  [x: string]: string | undefined;
1597
1333
  }): void;
1598
1334
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1599
- setLoadingP(p?: Promise<void> | undefined): void;
1335
+ setLoadingP(p?: Promise<void>): void;
1600
1336
  load(): Promise<void>;
1601
1337
  loadPre(): Promise<void>;
1602
1338
  } & {
@@ -1615,11 +1351,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1615
1351
  }>;
1616
1352
  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>) | undefined;
1617
1353
  readonly assemblyNamesList: any[];
1618
- readonly assemblyList: ({
1619
- [x: string]: any;
1620
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1621
- setSubschema(slotName: string, data: unknown): any;
1622
- } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[];
1354
+ readonly assemblyList: AnyConfigurationModel[];
1623
1355
  readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
1624
1356
  } & {
1625
1357
  waitForAssembly(assemblyName: string): Promise<({
@@ -1667,7 +1399,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1667
1399
  [x: string]: string | undefined;
1668
1400
  }): void;
1669
1401
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1670
- setLoadingP(p?: Promise<void> | undefined): void;
1402
+ setLoadingP(p?: Promise<void>): void;
1671
1403
  load(): Promise<void>;
1672
1404
  loadPre(): Promise<void>;
1673
1405
  } & {
@@ -1729,7 +1461,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1729
1461
  [x: string]: string | undefined;
1730
1462
  }): void;
1731
1463
  setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1732
- setLoadingP(p?: Promise<void> | undefined): void;
1464
+ setLoadingP(p?: Promise<void>): void;
1733
1465
  load(): Promise<void>;
1734
1466
  loadPre(): Promise<void>;
1735
1467
  } & {
@@ -1750,7 +1482,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1750
1482
  getRefNameMapForAdapter(adapterConf: {
1751
1483
  [x: string]: unknown;
1752
1484
  }, assemblyName: string | undefined, opts: {
1753
- signal?: AbortSignal | undefined;
1485
+ signal?: AbortSignal;
1754
1486
  sessionId: string;
1755
1487
  }): Promise<{
1756
1488
  [x: string]: string | undefined;
@@ -1758,7 +1490,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1758
1490
  getReverseRefNameMapForAdapter(adapterConf: {
1759
1491
  [x: string]: unknown;
1760
1492
  }, assemblyName: string | undefined, opts: {
1761
- signal?: AbortSignal | undefined;
1493
+ signal?: AbortSignal;
1762
1494
  sessionId: string;
1763
1495
  }): Promise<{
1764
1496
  [x: string]: string | undefined;
@@ -1766,135 +1498,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1766
1498
  isValidRefName(refName: string, assemblyName: string): boolean;
1767
1499
  } & {
1768
1500
  afterAttach(): void;
1769
- removeAssembly(asm: {
1770
- configuration: any;
1771
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1772
- error: unknown; /**
1773
- * #action
1774
- */
1775
- loaded: boolean;
1776
- loadingP: Promise<void> | undefined;
1777
- volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1778
- refNameAliases: {
1779
- [x: string]: string | undefined;
1780
- } | undefined;
1781
- lowerCaseRefNameAliases: {
1782
- [x: string]: string | undefined;
1783
- } | undefined;
1784
- cytobands: import("@jbrowse/core/util").Feature[] | undefined;
1785
- } & {
1786
- getConf(arg: string): any;
1787
- } & {
1788
- readonly initialized: boolean;
1789
- readonly name: string;
1790
- readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1791
- readonly aliases: string[];
1792
- readonly displayName: string | undefined;
1793
- hasName(name: string): boolean;
1794
- readonly allAliases: string[];
1795
- readonly allRefNames: string[] | undefined;
1796
- readonly lowerCaseRefNames: string[] | undefined;
1797
- readonly allRefNamesWithLowerCase: string[] | undefined;
1798
- readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
1799
- readonly refNameColors: string[];
1800
- } & {
1801
- readonly refNames: string[] | undefined;
1802
- } & {
1803
- getCanonicalRefName(refName: string): string | undefined;
1804
- getRefNameColor(refName: string): string | undefined;
1805
- isValidRefName(refName: string): boolean;
1806
- } & {
1807
- setLoaded({ adapterRegionsWithAssembly, refNameAliases, lowerCaseRefNameAliases, cytobands, }: import("@jbrowse/core/assemblyManager/assembly").Loading): void;
1808
- setError(e: unknown): void;
1809
- setRegions(regions: import("@jbrowse/core/util").Region[]): void;
1810
- setRefNameAliases(aliases: {
1811
- [x: string]: string | undefined;
1812
- }, lcAliases: {
1813
- [x: string]: string | undefined;
1814
- }): void;
1815
- setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1816
- setLoadingP(p?: Promise<void> | undefined): void;
1817
- load(): Promise<void>;
1818
- loadPre(): Promise<void>;
1819
- } & {
1820
- getAdapterMapEntry(adapterConf: {
1821
- [x: string]: unknown;
1822
- }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
1823
- getRefNameMapForAdapter(adapterConf: {
1824
- [x: string]: unknown;
1825
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1826
- [x: string]: string | undefined;
1827
- }>;
1828
- getReverseRefNameMapForAdapter(adapterConf: {
1829
- [x: string]: unknown;
1830
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1831
- [x: string]: string | undefined;
1832
- }>;
1833
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
1834
- configuration: import("mobx-state-tree").IMaybe<import("mobx-state-tree").IReferenceType<import("mobx-state-tree").IAnyType>>;
1835
- }, {
1836
- error: unknown; /**
1837
- * #action
1838
- */
1839
- loaded: boolean;
1840
- loadingP: Promise<void> | undefined;
1841
- volatileRegions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1842
- refNameAliases: {
1843
- [x: string]: string | undefined;
1844
- } | undefined;
1845
- lowerCaseRefNameAliases: {
1846
- [x: string]: string | undefined;
1847
- } | undefined;
1848
- cytobands: import("@jbrowse/core/util").Feature[] | undefined;
1849
- } & {
1850
- getConf(arg: string): any;
1851
- } & {
1852
- readonly initialized: boolean;
1853
- readonly name: string;
1854
- readonly regions: import("@jbrowse/core/assemblyManager/assembly").BasicRegion[] | undefined;
1855
- readonly aliases: string[];
1856
- readonly displayName: string | undefined;
1857
- hasName(name: string): boolean;
1858
- readonly allAliases: string[];
1859
- readonly allRefNames: string[] | undefined;
1860
- readonly lowerCaseRefNames: string[] | undefined;
1861
- readonly allRefNamesWithLowerCase: string[] | undefined;
1862
- readonly rpcManager: import("@jbrowse/core/rpc/RpcManager").default;
1863
- readonly refNameColors: string[];
1864
- } & {
1865
- readonly refNames: string[] | undefined;
1866
- } & {
1867
- getCanonicalRefName(refName: string): string | undefined;
1868
- getRefNameColor(refName: string): string | undefined;
1869
- isValidRefName(refName: string): boolean;
1870
- } & {
1871
- setLoaded({ adapterRegionsWithAssembly, refNameAliases, lowerCaseRefNameAliases, cytobands, }: import("@jbrowse/core/assemblyManager/assembly").Loading): void;
1872
- setError(e: unknown): void;
1873
- setRegions(regions: import("@jbrowse/core/util").Region[]): void;
1874
- setRefNameAliases(aliases: {
1875
- [x: string]: string | undefined;
1876
- }, lcAliases: {
1877
- [x: string]: string | undefined;
1878
- }): void;
1879
- setCytobands(cytobands: import("@jbrowse/core/util").Feature[]): void;
1880
- setLoadingP(p?: Promise<void> | undefined): void;
1881
- load(): Promise<void>;
1882
- loadPre(): Promise<void>;
1883
- } & {
1884
- getAdapterMapEntry(adapterConf: {
1885
- [x: string]: unknown;
1886
- }, options: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<import("@jbrowse/core/assemblyManager/assembly").RefNameMap>;
1887
- getRefNameMapForAdapter(adapterConf: {
1888
- [x: string]: unknown;
1889
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1890
- [x: string]: string | undefined;
1891
- }>;
1892
- getReverseRefNameMapForAdapter(adapterConf: {
1893
- [x: string]: unknown;
1894
- }, opts: import("@jbrowse/core/data_adapters/BaseAdapter").BaseOptions): Promise<{
1895
- [x: string]: string | undefined;
1896
- }>;
1897
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>): void;
1501
+ removeAssembly(asm: import("@jbrowse/core/assemblyManager/assembly").Assembly): void;
1898
1502
  addAssembly(configuration: any): void;
1899
1503
  replaceAssembly(idx: number, configuration: any): void;
1900
1504
  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
@@ -1906,7 +1510,7 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1906
1510
  pluginManager: PluginManager;
1907
1511
  } & {
1908
1512
  setError(error: unknown): void;
1909
- setSession(sessionSnapshot?: any): void;
1513
+ setSession(sessionSnapshot?: import("mobx-state-tree").SnapshotIn<import("mobx-state-tree").IAnyType>): void;
1910
1514
  setDefaultSession(): void;
1911
1515
  setSessionPath(path: string): void;
1912
1516
  renameCurrentSession(newName: string): void;
@@ -1917,7 +1521,13 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1917
1521
  readonly configuration: {
1918
1522
  [x: string]: any;
1919
1523
  } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1920
- setSubschema(slotName: string, data: unknown): any;
1524
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1525
+ [x: string]: any;
1526
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1527
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1528
+ [x: string]: any;
1529
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
1530
+ } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
1921
1531
  } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>;
1922
1532
  readonly adminMode: boolean;
1923
1533
  readonly textSearchManager: import("@jbrowse/core/util").TextSearchManager;
@@ -1925,14 +1535,22 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1925
1535
  readonly assemblies: ({
1926
1536
  [x: string]: any;
1927
1537
  } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1928
- setSubschema(slotName: string, data: unknown): any;
1538
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1539
+ [x: string]: any;
1540
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1541
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1542
+ [x: string]: any;
1543
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
1544
+ } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
1929
1545
  } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1930
1546
  aliases: {
1931
1547
  type: string;
1932
1548
  defaultValue: never[];
1933
1549
  description: string;
1934
1550
  };
1935
- sequence: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
1551
+ sequence: import("@jbrowse/core/configuration" /**
1552
+ * #getter
1553
+ */).AnyConfigurationSchemaType;
1936
1554
  refNameColors: {
1937
1555
  type: string;
1938
1556
  defaultValue: never[];
@@ -1957,102 +1575,22 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
1957
1575
  } & {
1958
1576
  getReferring(object: IAnyStateTreeNode): import("./ReferenceManagement").ReferringNode[];
1959
1577
  } & {
1960
- removeReferring(referring: import("./ReferenceManagement").ReferringNode[], track: {
1961
- [x: string]: any;
1962
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1963
- setSubschema(slotName: string, data: unknown): any;
1964
- } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1965
- name: {
1966
- description: string;
1967
- type: string;
1968
- defaultValue: string;
1969
- };
1970
- assemblyNames: {
1971
- description: string;
1972
- type: string;
1973
- defaultValue: string[];
1974
- };
1975
- description: {
1976
- description: string;
1977
- type: string;
1978
- defaultValue: string;
1979
- };
1980
- category: {
1981
- description: string;
1982
- type: string;
1983
- defaultValue: never[];
1984
- };
1985
- metadata: {
1986
- type: string;
1987
- description: string;
1988
- defaultValue: {};
1989
- };
1990
- adapter: import("mobx-state-tree").IAnyModelType;
1991
- textSearching: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
1992
- indexingAttributes: {
1993
- type: string;
1994
- description: string;
1995
- defaultValue: string[];
1996
- };
1997
- indexingFeatureTypesToExclude: {
1998
- type: string;
1999
- description: string;
2000
- defaultValue: string[];
2001
- };
2002
- textSearchAdapter: import("mobx-state-tree").IAnyModelType;
2003
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
2004
- displays: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyModelType>;
2005
- formatDetails: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2006
- feature: {
2007
- type: string;
2008
- description: string;
2009
- defaultValue: {};
2010
- contextVariable: string[];
2011
- };
2012
- subfeatures: {
2013
- type: string;
2014
- /** Session mixin MST type for a session that has `sessionTracks` */
2015
- description: string;
2016
- defaultValue: {};
2017
- contextVariable: string[];
2018
- };
2019
- depth: {
2020
- type: string;
2021
- defaultValue: number;
2022
- description: string;
2023
- };
2024
- maxDepth: {
2025
- type: string;
2026
- defaultValue: number;
2027
- description: string;
2028
- };
2029
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
2030
- formatAbout: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2031
- config: {
2032
- type: string;
2033
- description: string;
2034
- defaultValue: {};
2035
- contextVariable: string[];
2036
- };
2037
- hideUris: {
2038
- type: string;
2039
- defaultValue: boolean;
2040
- };
2041
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
2042
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "trackId">>>, callbacks: Function[], dereferenceTypeCount: Record<string, number>): void;
1578
+ removeReferring(referring: import("./ReferenceManagement").ReferringNode[], track: import("@jbrowse/core/pluggableElementTypes").BaseTrackConfig, callbacks: Function[], dereferenceTypeCount: Record<string, number>): void;
2043
1579
  } & {
2044
1580
  readonly tracks: ({
2045
1581
  [x: string]: any;
2046
1582
  } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
2047
- setSubschema(slotName: string, data: unknown): any;
1583
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1584
+ [x: string]: any;
1585
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1586
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1587
+ [x: string]: any;
1588
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
1589
+ } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
2048
1590
  } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[];
2049
1591
  } & {
2050
1592
  addTrackConf(trackConf: AnyConfiguration): any;
2051
- deleteTrackConf(trackConf: {
2052
- [x: string]: any;
2053
- } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
2054
- setSubschema(slotName: string, data: unknown): any;
2055
- } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>): any;
1593
+ deleteTrackConf(trackConf: AnyConfigurationModel): any;
2056
1594
  } & {
2057
1595
  /**
2058
1596
  * #getter
@@ -2060,7 +1598,13 @@ export declare function SessionTracksManagerSessionMixin(pluginManager: PluginMa
2060
1598
  readonly tracks: ({
2061
1599
  [x: string]: any;
2062
1600
  } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
2063
- setSubschema(slotName: string, data: unknown): any;
1601
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1602
+ [x: string]: any;
1603
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
1604
+ setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
1605
+ [x: string]: any;
1606
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
1607
+ } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
2064
1608
  } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>)[];
2065
1609
  } & {
2066
1610
  /**