@jbrowse/plugin-wiggle 3.7.0 → 4.0.1

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (403) hide show
  1. package/esm/BigWigAdapter/BigWigAdapter.d.ts +14 -1
  2. package/esm/BigWigAdapter/BigWigAdapter.js +118 -22
  3. package/esm/BigWigAdapter/configSchema.d.ts +2 -2
  4. package/esm/BigWigAdapter/configSchema.js +1 -1
  5. package/esm/BigWigAdapter/index.js +2 -2
  6. package/esm/CreateMultiWiggleExtension/index.js +1 -1
  7. package/esm/DensityRenderer/DensityRenderer.d.ts +5 -6
  8. package/esm/DensityRenderer/DensityRenderer.js +6 -5
  9. package/esm/DensityRenderer/configSchema.d.ts +3 -3
  10. package/esm/DensityRenderer/configSchema.js +1 -1
  11. package/esm/DensityRenderer/index.js +11 -9
  12. package/esm/DensityRenderer/makeImageData.d.ts +3 -0
  13. package/esm/DensityRenderer/makeImageData.js +13 -0
  14. package/esm/DensityRenderer/renderDensity.d.ts +3 -0
  15. package/esm/DensityRenderer/renderDensity.js +18 -0
  16. package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +5 -7
  17. package/esm/LinePlotRenderer/LinePlotRenderer.js +6 -15
  18. package/esm/LinePlotRenderer/configSchema.d.ts +4 -4
  19. package/esm/LinePlotRenderer/configSchema.js +1 -1
  20. package/esm/LinePlotRenderer/index.js +4 -4
  21. package/esm/LinePlotRenderer/makeImageData.d.ts +3 -0
  22. package/esm/LinePlotRenderer/makeImageData.js +13 -0
  23. package/esm/LinePlotRenderer/renderLinePlot.d.ts +3 -0
  24. package/esm/LinePlotRenderer/renderLinePlot.js +23 -0
  25. package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
  26. package/esm/LinearWiggleDisplay/components/Tooltip.js +10 -6
  27. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  28. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
  29. package/esm/LinearWiggleDisplay/configSchema.d.ts +9 -9
  30. package/esm/LinearWiggleDisplay/configSchema.js +2 -2
  31. package/esm/LinearWiggleDisplay/index.d.ts +3 -3
  32. package/esm/LinearWiggleDisplay/index.js +6 -6
  33. package/esm/LinearWiggleDisplay/model.d.ts +1128 -105
  34. package/esm/LinearWiggleDisplay/model.js +58 -18
  35. package/esm/LinearWiggleDisplay/renderSvg.d.ts +1 -1
  36. package/esm/LinearWiggleDisplay/renderSvg.js +3 -2
  37. package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +5 -7
  38. package/esm/MultiDensityRenderer/MultiDensityRenderer.js +6 -24
  39. package/esm/MultiDensityRenderer/configSchema.d.ts +3 -3
  40. package/esm/MultiDensityRenderer/configSchema.js +1 -1
  41. package/esm/MultiDensityRenderer/index.js +4 -4
  42. package/esm/MultiDensityRenderer/makeImageData.d.ts +3 -0
  43. package/esm/MultiDensityRenderer/makeImageData.js +7 -0
  44. package/esm/MultiDensityRenderer/renderMultiDensity.d.ts +3 -0
  45. package/esm/MultiDensityRenderer/renderMultiDensity.js +37 -0
  46. package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +5 -7
  47. package/esm/MultiLineRenderer/MultiLineRenderer.js +6 -17
  48. package/esm/MultiLineRenderer/configSchema.d.ts +5 -5
  49. package/esm/MultiLineRenderer/configSchema.js +2 -2
  50. package/esm/MultiLineRenderer/index.js +4 -4
  51. package/esm/MultiLineRenderer/makeImageData.d.ts +3 -0
  52. package/esm/MultiLineRenderer/makeImageData.js +7 -0
  53. package/esm/MultiLineRenderer/renderMultiLine.d.ts +3 -0
  54. package/esm/MultiLineRenderer/renderMultiLine.js +34 -0
  55. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +2 -2
  56. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.js +11 -6
  57. package/esm/MultiLinearWiggleDisplay/components/FullHeightScaleBar.d.ts +1 -1
  58. package/esm/MultiLinearWiggleDisplay/components/FullHeightScaleBar.js +4 -4
  59. package/esm/MultiLinearWiggleDisplay/components/IndividualScaleBars.d.ts +1 -1
  60. package/esm/MultiLinearWiggleDisplay/components/IndividualScaleBars.js +5 -5
  61. package/esm/MultiLinearWiggleDisplay/components/LegendItem.d.ts +3 -3
  62. package/esm/MultiLinearWiggleDisplay/components/LegendItem.js +1 -1
  63. package/esm/MultiLinearWiggleDisplay/components/LegendItemText.d.ts +6 -4
  64. package/esm/MultiLinearWiggleDisplay/components/LegendItemText.js +2 -2
  65. package/esm/MultiLinearWiggleDisplay/components/RectBg.d.ts +1 -1
  66. package/esm/MultiLinearWiggleDisplay/components/RectBg.js +4 -3
  67. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +2 -2
  68. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.js +3 -3
  69. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
  70. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +2 -2
  71. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
  72. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.js +2 -2
  73. package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +2 -4
  74. package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +8 -9
  75. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.d.ts +1 -1
  76. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.js +3 -3
  77. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.d.ts +1 -1
  78. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.js +4 -5
  79. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.d.ts +1 -1
  80. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.js +12 -17
  81. package/esm/MultiLinearWiggleDisplay/components/WiggleClusterDialog/types.d.ts +1 -1
  82. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  83. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
  84. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +2 -2
  85. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.js +5 -16
  86. package/esm/MultiLinearWiggleDisplay/components/YScaleBarsWrapper.d.ts +7 -0
  87. package/esm/MultiLinearWiggleDisplay/components/YScaleBarsWrapper.js +15 -0
  88. package/esm/MultiLinearWiggleDisplay/components/types.d.ts +10 -0
  89. package/esm/MultiLinearWiggleDisplay/components/types.js +1 -0
  90. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialog.js +4 -4
  91. package/esm/MultiLinearWiggleDisplay/components/ui/SetColorDialogBulkEditPanel.js +1 -1
  92. package/esm/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
  93. package/esm/MultiLinearWiggleDisplay/configSchema.d.ts +9 -9
  94. package/esm/MultiLinearWiggleDisplay/configSchema.js +2 -2
  95. package/esm/MultiLinearWiggleDisplay/index.js +3 -3
  96. package/esm/MultiLinearWiggleDisplay/model.d.ts +3624 -106
  97. package/esm/MultiLinearWiggleDisplay/model.js +78 -48
  98. package/esm/MultiLinearWiggleDisplay/renderSvg.d.ts +1 -1
  99. package/esm/MultiLinearWiggleDisplay/renderSvg.js +3 -2
  100. package/esm/MultiQuantitativeTrack/configSchema.d.ts +16 -11
  101. package/esm/MultiQuantitativeTrack/index.js +13 -2
  102. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +5 -7
  103. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +6 -29
  104. package/esm/MultiRowLineRenderer/configSchema.d.ts +5 -5
  105. package/esm/MultiRowLineRenderer/configSchema.js +2 -2
  106. package/esm/MultiRowLineRenderer/index.js +4 -4
  107. package/esm/MultiRowLineRenderer/makeImageData.d.ts +3 -0
  108. package/esm/MultiRowLineRenderer/makeImageData.js +7 -0
  109. package/esm/MultiRowLineRenderer/renderMultiRowLine.d.ts +3 -0
  110. package/esm/MultiRowLineRenderer/renderMultiRowLine.js +44 -0
  111. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +5 -7
  112. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +6 -29
  113. package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +5 -5
  114. package/esm/MultiRowXYPlotRenderer/configSchema.js +2 -2
  115. package/esm/MultiRowXYPlotRenderer/index.js +4 -4
  116. package/esm/MultiRowXYPlotRenderer/makeImageData.d.ts +3 -0
  117. package/esm/MultiRowXYPlotRenderer/makeImageData.js +7 -0
  118. package/esm/MultiRowXYPlotRenderer/renderMultiRowXYPlot.d.ts +3 -0
  119. package/esm/MultiRowXYPlotRenderer/renderMultiRowXYPlot.js +42 -0
  120. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +5 -0
  121. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +48 -18
  122. package/esm/MultiWiggleAdapter/configSchema.d.ts +2 -2
  123. package/esm/MultiWiggleAdapter/index.js +2 -2
  124. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
  125. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +3 -4
  126. package/esm/MultiWiggleAddTrackWorkflow/index.js +2 -2
  127. package/esm/MultiWiggleRendering.d.ts +7 -7
  128. package/esm/MultiWiggleRendering.js +9 -7
  129. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +5 -7
  130. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +6 -20
  131. package/esm/MultiXYPlotRenderer/configSchema.d.ts +5 -5
  132. package/esm/MultiXYPlotRenderer/configSchema.js +2 -2
  133. package/esm/MultiXYPlotRenderer/index.js +4 -4
  134. package/esm/MultiXYPlotRenderer/makeImageData.d.ts +3 -0
  135. package/esm/MultiXYPlotRenderer/makeImageData.js +7 -0
  136. package/esm/MultiXYPlotRenderer/renderMultiXYPlot.d.ts +3 -0
  137. package/esm/MultiXYPlotRenderer/renderMultiXYPlot.js +35 -0
  138. package/esm/QuantitativeTrack/configSchema.d.ts +16 -11
  139. package/esm/QuantitativeTrack/index.js +13 -2
  140. package/esm/SVGErrorBox.d.ts +5 -0
  141. package/esm/SVGErrorBox.js +4 -0
  142. package/esm/Tooltip.d.ts +1 -3
  143. package/esm/Tooltip.js +7 -7
  144. package/esm/WiggleRPC/MultiWiggleClusterScoreMatrix.d.ts +2 -10
  145. package/esm/WiggleRPC/MultiWiggleClusterScoreMatrix.js +3 -15
  146. package/esm/WiggleRPC/MultiWiggleGetScoreMatrix.d.ts +1 -1
  147. package/esm/WiggleRPC/MultiWiggleGetScoreMatrix.js +2 -5
  148. package/esm/WiggleRPC/MultiWiggleGetSources.js +1 -4
  149. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +1 -4
  150. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +10 -0
  151. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +26 -5
  152. package/esm/WiggleRPC/executeClusterScoreMatrix.d.ts +6 -0
  153. package/esm/WiggleRPC/executeClusterScoreMatrix.js +15 -0
  154. package/esm/WiggleRPC/getScoreMatrix.d.ts +1 -1
  155. package/esm/WiggleRPC/getScoreMatrix.js +9 -6
  156. package/esm/WiggleRPC/rpcMethods.d.ts +5 -5
  157. package/esm/WiggleRPC/rpcMethods.js +5 -5
  158. package/esm/WiggleRPC/types.d.ts +1 -1
  159. package/esm/WiggleRendering.d.ts +2 -3
  160. package/esm/WiggleRendering.js +16 -3
  161. package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +5 -6
  162. package/esm/XYPlotRenderer/XYPlotRenderer.js +6 -20
  163. package/esm/XYPlotRenderer/configSchema.d.ts +5 -5
  164. package/esm/XYPlotRenderer/configSchema.js +2 -2
  165. package/esm/XYPlotRenderer/index.d.ts +3 -3
  166. package/esm/XYPlotRenderer/index.js +14 -12
  167. package/esm/XYPlotRenderer/makeImageData.d.ts +3 -0
  168. package/esm/XYPlotRenderer/makeImageData.js +13 -0
  169. package/esm/XYPlotRenderer/renderXYPlot.d.ts +3 -0
  170. package/esm/XYPlotRenderer/renderXYPlot.js +23 -0
  171. package/esm/configSchema.d.ts +3 -3
  172. package/esm/configSchema.js +1 -1
  173. package/esm/drawDensity.d.ts +4 -2
  174. package/esm/drawDensity.js +25 -15
  175. package/esm/drawLine.d.ts +5 -3
  176. package/esm/drawLine.js +118 -41
  177. package/esm/drawXY.d.ts +4 -2
  178. package/esm/drawXY.js +75 -36
  179. package/esm/getMultiWiggleSourcesAutorun.d.ts +3 -2
  180. package/esm/getMultiWiggleSourcesAutorun.js +7 -2
  181. package/esm/getQuantitativeStats.d.ts +4 -2
  182. package/esm/getQuantitativeStats.js +18 -7
  183. package/esm/getQuantitativeStatsAutorun.d.ts +3 -2
  184. package/esm/getQuantitativeStatsAutorun.js +3 -3
  185. package/esm/index.d.ts +15 -19
  186. package/esm/index.js +31 -37
  187. package/esm/multiRendererHelper.d.ts +7 -0
  188. package/esm/multiRendererHelper.js +12 -0
  189. package/esm/saveTrackFormats/bedGraph.d.ts +4 -0
  190. package/esm/saveTrackFormats/bedGraph.js +11 -0
  191. package/esm/shared/SharedWiggleConfigSchema.d.ts +5 -5
  192. package/esm/shared/SharedWiggleConfigSchema.js +1 -1
  193. package/esm/shared/SharedWiggleMixin.d.ts +1081 -133
  194. package/esm/shared/SharedWiggleMixin.js +48 -26
  195. package/esm/shared/YScaleBar.d.ts +1 -1
  196. package/esm/shared/YScaleBar.js +16 -4
  197. package/esm/shared/axisPropsFromTickScale.d.ts +7 -0
  198. package/esm/shared/axisPropsFromTickScale.js +12 -0
  199. package/esm/svgExportUtil.d.ts +9 -0
  200. package/esm/svgExportUtil.js +6 -0
  201. package/esm/types.d.ts +24 -0
  202. package/esm/types.js +1 -0
  203. package/esm/util.d.ts +34 -1
  204. package/esm/util.js +60 -1
  205. package/package.json +35 -38
  206. package/dist/BigWigAdapter/BigWigAdapter.d.ts +0 -25
  207. package/dist/BigWigAdapter/BigWigAdapter.js +0 -81
  208. package/dist/BigWigAdapter/configSchema.d.ts +0 -20
  209. package/dist/BigWigAdapter/configSchema.js +0 -37
  210. package/dist/BigWigAdapter/index.d.ts +0 -2
  211. package/dist/BigWigAdapter/index.js +0 -54
  212. package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +0 -8
  213. package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +0 -26
  214. package/dist/CreateMultiWiggleExtension/index.d.ts +0 -2
  215. package/dist/CreateMultiWiggleExtension/index.js +0 -95
  216. package/dist/DensityRenderer/DensityRenderer.d.ts +0 -7
  217. package/dist/DensityRenderer/DensityRenderer.js +0 -46
  218. package/dist/DensityRenderer/configSchema.d.ts +0 -37
  219. package/dist/DensityRenderer/configSchema.js +0 -13
  220. package/dist/DensityRenderer/index.d.ts +0 -2
  221. package/dist/DensityRenderer/index.js +0 -17
  222. package/dist/GuessAdapter/index.d.ts +0 -2
  223. package/dist/GuessAdapter/index.js +0 -25
  224. package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +0 -8
  225. package/dist/LinePlotRenderer/LinePlotRenderer.js +0 -56
  226. package/dist/LinePlotRenderer/configSchema.d.ts +0 -43
  227. package/dist/LinePlotRenderer/configSchema.js +0 -19
  228. package/dist/LinePlotRenderer/index.d.ts +0 -2
  229. package/dist/LinePlotRenderer/index.js +0 -17
  230. package/dist/LinearWiggleDisplay/components/SetColorDialog.d.ts +0 -12
  231. package/dist/LinearWiggleDisplay/components/SetColorDialog.js +0 -31
  232. package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +0 -15
  233. package/dist/LinearWiggleDisplay/components/Tooltip.js +0 -32
  234. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -5
  235. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +0 -28
  236. package/dist/LinearWiggleDisplay/configSchema.d.ts +0 -78
  237. package/dist/LinearWiggleDisplay/configSchema.js +0 -29
  238. package/dist/LinearWiggleDisplay/index.d.ts +0 -5
  239. package/dist/LinearWiggleDisplay/index.js +0 -65
  240. package/dist/LinearWiggleDisplay/model.d.ts +0 -434
  241. package/dist/LinearWiggleDisplay/model.js +0 -262
  242. package/dist/LinearWiggleDisplay/renderSvg.d.ts +0 -3
  243. package/dist/LinearWiggleDisplay/renderSvg.js +0 -16
  244. package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +0 -8
  245. package/dist/MultiDensityRenderer/MultiDensityRenderer.js +0 -65
  246. package/dist/MultiDensityRenderer/configSchema.d.ts +0 -37
  247. package/dist/MultiDensityRenderer/configSchema.js +0 -13
  248. package/dist/MultiDensityRenderer/index.d.ts +0 -2
  249. package/dist/MultiDensityRenderer/index.js +0 -17
  250. package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +0 -8
  251. package/dist/MultiLineRenderer/MultiLineRenderer.js +0 -58
  252. package/dist/MultiLineRenderer/configSchema.d.ts +0 -49
  253. package/dist/MultiLineRenderer/configSchema.js +0 -26
  254. package/dist/MultiLineRenderer/index.d.ts +0 -2
  255. package/dist/MultiLineRenderer/index.js +0 -17
  256. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +0 -7
  257. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -19
  258. package/dist/MultiLinearWiggleDisplay/components/FullHeightScaleBar.d.ts +0 -7
  259. package/dist/MultiLinearWiggleDisplay/components/FullHeightScaleBar.js +0 -17
  260. package/dist/MultiLinearWiggleDisplay/components/IndividualScaleBars.d.ts +0 -7
  261. package/dist/MultiLinearWiggleDisplay/components/IndividualScaleBars.js +0 -15
  262. package/dist/MultiLinearWiggleDisplay/components/LegendItem.d.ts +0 -11
  263. package/dist/MultiLinearWiggleDisplay/components/LegendItem.js +0 -17
  264. package/dist/MultiLinearWiggleDisplay/components/LegendItemText.d.ts +0 -10
  265. package/dist/MultiLinearWiggleDisplay/components/LegendItemText.js +0 -13
  266. package/dist/MultiLinearWiggleDisplay/components/RectBg.d.ts +0 -8
  267. package/dist/MultiLinearWiggleDisplay/components/RectBg.js +0 -9
  268. package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +0 -5
  269. package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.js +0 -19
  270. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +0 -9
  271. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +0 -12
  272. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +0 -7
  273. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js +0 -130
  274. package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +0 -18
  275. package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +0 -39
  276. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.d.ts +0 -6
  277. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialog.js +0 -29
  278. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.d.ts +0 -7
  279. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogAuto.js +0 -87
  280. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.d.ts +0 -7
  281. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/WiggleClusterDialogManual.js +0 -153
  282. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/types.d.ts +0 -8
  283. package/dist/MultiLinearWiggleDisplay/components/WiggleClusterDialog/types.js +0 -2
  284. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +0 -5
  285. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.js +0 -14
  286. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +0 -7
  287. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.js +0 -28
  288. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialog.d.ts +0 -31
  289. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialog.js +0 -51
  290. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialogBulkEditPanel.d.ts +0 -10
  291. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialogBulkEditPanel.js +0 -84
  292. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialogHelpfulTips.d.ts +0 -1
  293. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialogHelpfulTips.js +0 -7
  294. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialogRowPalettizer.d.ts +0 -10
  295. package/dist/MultiLinearWiggleDisplay/components/ui/SetColorDialogRowPalettizer.js +0 -42
  296. package/dist/MultiLinearWiggleDisplay/components/util.d.ts +0 -9
  297. package/dist/MultiLinearWiggleDisplay/components/util.js +0 -45
  298. package/dist/MultiLinearWiggleDisplay/configSchema.d.ts +0 -84
  299. package/dist/MultiLinearWiggleDisplay/configSchema.js +0 -44
  300. package/dist/MultiLinearWiggleDisplay/index.d.ts +0 -2
  301. package/dist/MultiLinearWiggleDisplay/index.js +0 -57
  302. package/dist/MultiLinearWiggleDisplay/model.d.ts +0 -453
  303. package/dist/MultiLinearWiggleDisplay/model.js +0 -413
  304. package/dist/MultiLinearWiggleDisplay/renderSvg.d.ts +0 -3
  305. package/dist/MultiLinearWiggleDisplay/renderSvg.js +0 -15
  306. package/dist/MultiLinearWiggleDisplay/types.d.ts +0 -15
  307. package/dist/MultiLinearWiggleDisplay/types.js +0 -2
  308. package/dist/MultiLinearWiggleDisplay/util.d.ts +0 -0
  309. package/dist/MultiLinearWiggleDisplay/util.js +0 -1
  310. package/dist/MultiQuantitativeTrack/configSchema.d.ts +0 -80
  311. package/dist/MultiQuantitativeTrack/configSchema.js +0 -11
  312. package/dist/MultiQuantitativeTrack/index.d.ts +0 -2
  313. package/dist/MultiQuantitativeTrack/index.js +0 -20
  314. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +0 -8
  315. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +0 -70
  316. package/dist/MultiRowLineRenderer/configSchema.d.ts +0 -49
  317. package/dist/MultiRowLineRenderer/configSchema.js +0 -26
  318. package/dist/MultiRowLineRenderer/index.d.ts +0 -2
  319. package/dist/MultiRowLineRenderer/index.js +0 -17
  320. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +0 -8
  321. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +0 -70
  322. package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +0 -57
  323. package/dist/MultiRowXYPlotRenderer/configSchema.js +0 -34
  324. package/dist/MultiRowXYPlotRenderer/index.d.ts +0 -2
  325. package/dist/MultiRowXYPlotRenderer/index.js +0 -17
  326. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +0 -31
  327. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +0 -110
  328. package/dist/MultiWiggleAdapter/configSchema.d.ts +0 -13
  329. package/dist/MultiWiggleAdapter/configSchema.js +0 -17
  330. package/dist/MultiWiggleAdapter/index.d.ts +0 -2
  331. package/dist/MultiWiggleAdapter/index.js +0 -57
  332. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +0 -5
  333. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +0 -89
  334. package/dist/MultiWiggleAddTrackWorkflow/index.d.ts +0 -2
  335. package/dist/MultiWiggleAddTrackWorkflow/index.js +0 -46
  336. package/dist/MultiWiggleRendering.d.ts +0 -19
  337. package/dist/MultiWiggleRendering.js +0 -81
  338. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +0 -8
  339. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +0 -61
  340. package/dist/MultiXYPlotRenderer/configSchema.d.ts +0 -57
  341. package/dist/MultiXYPlotRenderer/configSchema.js +0 -34
  342. package/dist/MultiXYPlotRenderer/index.d.ts +0 -2
  343. package/dist/MultiXYPlotRenderer/index.js +0 -17
  344. package/dist/QuantitativeTrack/configSchema.d.ts +0 -80
  345. package/dist/QuantitativeTrack/configSchema.js +0 -11
  346. package/dist/QuantitativeTrack/index.d.ts +0 -2
  347. package/dist/QuantitativeTrack/index.js +0 -20
  348. package/dist/Tooltip.d.ts +0 -18
  349. package/dist/Tooltip.js +0 -34
  350. package/dist/WiggleBaseRenderer.d.ts +0 -57
  351. package/dist/WiggleBaseRenderer.js +0 -42
  352. package/dist/WiggleRPC/MultiWiggleClusterScoreMatrix.d.ts +0 -14
  353. package/dist/WiggleRPC/MultiWiggleClusterScoreMatrix.js +0 -31
  354. package/dist/WiggleRPC/MultiWiggleGetScoreMatrix.d.ts +0 -6
  355. package/dist/WiggleRPC/MultiWiggleGetScoreMatrix.js +0 -22
  356. package/dist/WiggleRPC/MultiWiggleGetSources.d.ts +0 -14
  357. package/dist/WiggleRPC/MultiWiggleGetSources.js +0 -22
  358. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +0 -12
  359. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +0 -22
  360. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +0 -13
  361. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +0 -22
  362. package/dist/WiggleRPC/getScoreMatrix.d.ts +0 -6
  363. package/dist/WiggleRPC/getScoreMatrix.js +0 -35
  364. package/dist/WiggleRPC/rpcMethods.d.ts +0 -5
  365. package/dist/WiggleRPC/rpcMethods.js +0 -21
  366. package/dist/WiggleRPC/types.d.ts +0 -13
  367. package/dist/WiggleRPC/types.js +0 -2
  368. package/dist/WiggleRendering.d.ts +0 -14
  369. package/dist/WiggleRendering.js +0 -35
  370. package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +0 -7
  371. package/dist/XYPlotRenderer/XYPlotRenderer.js +0 -61
  372. package/dist/XYPlotRenderer/configSchema.d.ts +0 -57
  373. package/dist/XYPlotRenderer/configSchema.js +0 -34
  374. package/dist/XYPlotRenderer/index.d.ts +0 -5
  375. package/dist/XYPlotRenderer/index.js +0 -24
  376. package/dist/configSchema.d.ts +0 -37
  377. package/dist/configSchema.js +0 -47
  378. package/dist/drawDensity.d.ts +0 -18
  379. package/dist/drawDensity.js +0 -81
  380. package/dist/drawLine.d.ts +0 -20
  381. package/dist/drawLine.js +0 -77
  382. package/dist/drawXY.d.ts +0 -21
  383. package/dist/drawXY.js +0 -191
  384. package/dist/getMultiWiggleSourcesAutorun.d.ts +0 -18
  385. package/dist/getMultiWiggleSourcesAutorun.js +0 -38
  386. package/dist/getQuantitativeStats.d.ts +0 -13
  387. package/dist/getQuantitativeStats.js +0 -70
  388. package/dist/getQuantitativeStatsAutorun.d.ts +0 -13
  389. package/dist/getQuantitativeStatsAutorun.js +0 -35
  390. package/dist/index.d.ts +0 -91
  391. package/dist/index.js +0 -112
  392. package/dist/shared/SetMinMaxDialog.d.ts +0 -10
  393. package/dist/shared/SetMinMaxDialog.js +0 -26
  394. package/dist/shared/SharedWiggleConfigSchema.d.ts +0 -66
  395. package/dist/shared/SharedWiggleConfigSchema.js +0 -56
  396. package/dist/shared/SharedWiggleMixin.d.ts +0 -420
  397. package/dist/shared/SharedWiggleMixin.js +0 -343
  398. package/dist/shared/YScaleBar.d.ts +0 -9
  399. package/dist/shared/YScaleBar.js +0 -12
  400. package/dist/util.d.ts +0 -25
  401. package/dist/util.js +0 -105
  402. package/esm/WiggleBaseRenderer.d.ts +0 -57
  403. package/esm/WiggleBaseRenderer.js +0 -36
@@ -1,20 +1,20 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
- export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
2
+ export default function WiggleConfigFactory(pluginManager: PluginManager): import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
3
3
  defaultRendering: {
4
4
  type: string;
5
- model: import("mobx-state-tree").ISimpleType<string>;
5
+ model: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
6
6
  defaultValue: string;
7
7
  };
8
- renderers: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
8
+ renderers: import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
9
9
  DensityRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
10
10
  XYPlotRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
11
11
  LinePlotRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
12
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
13
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
12
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, undefined>>;
13
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
14
14
  autoscale: {
15
15
  type: string;
16
16
  defaultValue: string;
17
- model: import("mobx-state-tree").ISimpleType<string>;
17
+ model: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
18
18
  description: string;
19
19
  };
20
20
  minimalTicks: {
@@ -39,7 +39,7 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
39
39
  };
40
40
  scaleType: {
41
41
  type: string;
42
- model: import("mobx-state-tree").ISimpleType<string>;
42
+ model: import("@jbrowse/mobx-state-tree").ISimpleType<string>;
43
43
  description: string;
44
44
  defaultValue: string;
45
45
  };
@@ -48,7 +48,7 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
48
48
  description: string;
49
49
  defaultValue: boolean;
50
50
  };
51
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
51
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaType<{
52
52
  maxFeatureScreenDensity: {
53
53
  type: string;
54
54
  description: string;
@@ -75,4 +75,4 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
75
75
  description: string;
76
76
  defaultValue: never[];
77
77
  };
78
- }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
78
+ }, import("node_modules/@jbrowse/core/src/configuration/configurationSchema.ts").ConfigurationSchemaOptions<undefined, "displayId">>, undefined>>, undefined>>;
@@ -1,6 +1,6 @@
1
1
  import { ConfigurationSchema } from '@jbrowse/core/configuration';
2
- import { types } from 'mobx-state-tree';
3
- import sharedWiggleConfigFactory from '../shared/SharedWiggleConfigSchema';
2
+ import { types } from '@jbrowse/mobx-state-tree';
3
+ import sharedWiggleConfigFactory from "../shared/SharedWiggleConfigSchema.js";
4
4
  export default function WiggleConfigFactory(pluginManager) {
5
5
  const XYPlotRendererConfigSchema = pluginManager.getRendererType('XYPlotRenderer').configSchema;
6
6
  const DensityRendererConfigSchema = pluginManager.getRendererType('DensityRenderer').configSchema;
@@ -1,5 +1,5 @@
1
1
  import type PluginManager from '@jbrowse/core/PluginManager';
2
2
  export default function LinearWiggleDisplayF(pluginManager: PluginManager): void;
3
- export { default as Tooltip } from './components/Tooltip';
4
- export { default as ReactComponent } from './components/WiggleDisplayComponent';
5
- export { default as modelFactory } from './model';
3
+ export { default as Tooltip } from './components/Tooltip.tsx';
4
+ export { default as ReactComponent } from './components/WiggleDisplayComponent.tsx';
5
+ export { default as modelFactory } from './model.ts';
@@ -1,7 +1,7 @@
1
1
  import { lazy } from 'react';
2
2
  import DisplayType from '@jbrowse/core/pluggableElementTypes/DisplayType';
3
- import configSchemaFactory from './configSchema';
4
- import modelFactory from './model';
3
+ import configSchemaFactory from "./configSchema.js";
4
+ import modelFactory from "./model.js";
5
5
  export default function LinearWiggleDisplayF(pluginManager) {
6
6
  pluginManager.addDisplayType(() => {
7
7
  const configSchema = configSchemaFactory(pluginManager);
@@ -13,10 +13,10 @@ export default function LinearWiggleDisplayF(pluginManager) {
13
13
  stateModel,
14
14
  trackType: 'QuantitativeTrack',
15
15
  viewType: 'LinearGenomeView',
16
- ReactComponent: lazy(() => import('./components/WiggleDisplayComponent')),
16
+ ReactComponent: lazy(() => import("./components/WiggleDisplayComponent.js")),
17
17
  });
18
18
  });
19
19
  }
20
- export { default as Tooltip } from './components/Tooltip';
21
- export { default as ReactComponent } from './components/WiggleDisplayComponent';
22
- export { default as modelFactory } from './model';
20
+ export { default as Tooltip } from "./components/Tooltip.js";
21
+ export { default as ReactComponent } from "./components/WiggleDisplayComponent.js";
22
+ export { default as modelFactory } from "./model.js";