@jbrowse/plugin-wiggle 2.17.0 → 2.18.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (284) hide show
  1. package/dist/BigWigAdapter/BigWigAdapter.d.ts +4 -3
  2. package/dist/BigWigAdapter/BigWigAdapter.js +3 -8
  3. package/dist/BigWigAdapter/configSchema.d.ts +0 -9
  4. package/dist/BigWigAdapter/configSchema.js +1 -13
  5. package/dist/BigWigAdapter/index.d.ts +1 -1
  6. package/dist/CreateMultiWiggleExtension/ConfirmDialog.d.ts +1 -1
  7. package/dist/CreateMultiWiggleExtension/ConfirmDialog.js +2 -2
  8. package/dist/CreateMultiWiggleExtension/index.d.ts +1 -1
  9. package/dist/CreateMultiWiggleExtension/index.js +26 -26
  10. package/dist/DensityRenderer/DensityRenderer.d.ts +2 -1
  11. package/dist/DensityRenderer/DensityRenderer.js +1 -1
  12. package/dist/DensityRenderer/configSchema.js +1 -7
  13. package/dist/DensityRenderer/index.d.ts +1 -1
  14. package/dist/DensityRenderer/index.js +1 -1
  15. package/dist/LinePlotRenderer/LinePlotRenderer.d.ts +3 -2
  16. package/dist/LinePlotRenderer/LinePlotRenderer.js +1 -1
  17. package/dist/LinePlotRenderer/configSchema.d.ts +0 -3
  18. package/dist/LinePlotRenderer/configSchema.js +1 -10
  19. package/dist/LinePlotRenderer/index.d.ts +1 -1
  20. package/dist/LinearWiggleDisplay/components/SetColorDialog.js +2 -2
  21. package/dist/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
  22. package/dist/LinearWiggleDisplay/components/Tooltip.js +0 -1
  23. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  24. package/dist/LinearWiggleDisplay/components/WiggleDisplayComponent.js +2 -2
  25. package/dist/LinearWiggleDisplay/configSchema.d.ts +1 -12
  26. package/dist/LinearWiggleDisplay/configSchema.js +0 -15
  27. package/dist/LinearWiggleDisplay/index.d.ts +1 -1
  28. package/dist/LinearWiggleDisplay/index.js +1 -1
  29. package/dist/LinearWiggleDisplay/model.d.ts +13 -71
  30. package/dist/LinearWiggleDisplay/model.js +2 -51
  31. package/dist/LinearWiggleDisplay/renderSvg.d.ts +2 -2
  32. package/dist/LinearWiggleDisplay/renderSvg.js +1 -2
  33. package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts +4 -3
  34. package/dist/MultiDensityRenderer/MultiDensityRenderer.js +2 -3
  35. package/dist/MultiDensityRenderer/configSchema.js +1 -7
  36. package/dist/MultiDensityRenderer/index.d.ts +1 -1
  37. package/dist/MultiLineRenderer/MultiLineRenderer.d.ts +3 -2
  38. package/dist/MultiLineRenderer/MultiLineRenderer.js +1 -2
  39. package/dist/MultiLineRenderer/configSchema.d.ts +0 -6
  40. package/dist/MultiLineRenderer/configSchema.js +1 -13
  41. package/dist/MultiLineRenderer/index.d.ts +1 -1
  42. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +1 -1
  43. package/dist/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -1
  44. package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +1 -1
  45. package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js +3 -7
  46. package/dist/MultiLinearWiggleDisplay/components/RectBg.js +1 -1
  47. package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +1 -1
  48. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
  49. package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js +3 -5
  50. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
  51. package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js +15 -26
  52. package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts +3 -3
  53. package/dist/MultiLinearWiggleDisplay/components/Tooltip.js +1 -2
  54. package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  55. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +1 -1
  56. package/dist/MultiLinearWiggleDisplay/components/YScaleBars.js +1 -1
  57. package/dist/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
  58. package/dist/MultiLinearWiggleDisplay/components/util.js +1 -1
  59. package/dist/MultiLinearWiggleDisplay/configSchema.d.ts +1 -10
  60. package/dist/MultiLinearWiggleDisplay/configSchema.js +1 -19
  61. package/dist/MultiLinearWiggleDisplay/index.d.ts +1 -1
  62. package/dist/MultiLinearWiggleDisplay/index.js +1 -1
  63. package/dist/MultiLinearWiggleDisplay/model.d.ts +17 -139
  64. package/dist/MultiLinearWiggleDisplay/model.js +14 -120
  65. package/dist/MultiLinearWiggleDisplay/renderSvg.d.ts +2 -2
  66. package/dist/MultiLinearWiggleDisplay/renderSvg.js +1 -1
  67. package/dist/MultiQuantitativeTrack/configSchema.d.ts +1 -1
  68. package/dist/MultiQuantitativeTrack/configSchema.js +1 -7
  69. package/dist/MultiQuantitativeTrack/index.d.ts +1 -1
  70. package/dist/MultiQuantitativeTrack/index.js +1 -1
  71. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +3 -2
  72. package/dist/MultiRowLineRenderer/MultiRowLineRenderer.js +1 -2
  73. package/dist/MultiRowLineRenderer/configSchema.d.ts +0 -6
  74. package/dist/MultiRowLineRenderer/configSchema.js +2 -14
  75. package/dist/MultiRowLineRenderer/index.d.ts +1 -1
  76. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +3 -2
  77. package/dist/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +1 -2
  78. package/dist/MultiRowXYPlotRenderer/configSchema.d.ts +0 -12
  79. package/dist/MultiRowXYPlotRenderer/configSchema.js +2 -20
  80. package/dist/MultiRowXYPlotRenderer/index.d.ts +1 -1
  81. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +4 -3
  82. package/dist/MultiWiggleAdapter/MultiWiggleAdapter.js +8 -13
  83. package/dist/MultiWiggleAdapter/configSchema.d.ts +0 -6
  84. package/dist/MultiWiggleAdapter/configSchema.js +1 -10
  85. package/dist/MultiWiggleAdapter/index.d.ts +1 -1
  86. package/dist/MultiWiggleAdapter/index.js +1 -1
  87. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
  88. package/dist/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +2 -4
  89. package/dist/MultiWiggleAddTrackWorkflow/index.d.ts +1 -1
  90. package/dist/MultiWiggleAddTrackWorkflow/index.js +1 -2
  91. package/dist/MultiWiggleRendering.d.ts +3 -3
  92. package/dist/MultiWiggleRendering.js +2 -2
  93. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +3 -2
  94. package/dist/MultiXYPlotRenderer/MultiXYPlotRenderer.js +1 -2
  95. package/dist/MultiXYPlotRenderer/configSchema.d.ts +0 -12
  96. package/dist/MultiXYPlotRenderer/configSchema.js +1 -19
  97. package/dist/MultiXYPlotRenderer/index.d.ts +1 -1
  98. package/dist/QuantitativeTrack/configSchema.d.ts +1 -1
  99. package/dist/QuantitativeTrack/configSchema.js +1 -7
  100. package/dist/QuantitativeTrack/index.d.ts +1 -1
  101. package/dist/QuantitativeTrack/index.js +1 -1
  102. package/dist/Tooltip.d.ts +1 -1
  103. package/dist/Tooltip.js +1 -2
  104. package/dist/WiggleBaseRenderer.d.ts +5 -8
  105. package/dist/WiggleBaseRenderer.js +0 -1
  106. package/dist/WiggleRPC/MultiWiggleGetSources.d.ts +5 -12
  107. package/dist/WiggleRPC/MultiWiggleGetSources.js +2 -29
  108. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +5 -7
  109. package/dist/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +2 -15
  110. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +4 -11
  111. package/dist/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +2 -29
  112. package/dist/WiggleRendering.d.ts +2 -2
  113. package/dist/WiggleRendering.js +1 -3
  114. package/dist/XYPlotRenderer/XYPlotRenderer.d.ts +3 -2
  115. package/dist/XYPlotRenderer/XYPlotRenderer.js +3 -5
  116. package/dist/XYPlotRenderer/configSchema.d.ts +0 -12
  117. package/dist/XYPlotRenderer/configSchema.js +2 -20
  118. package/dist/XYPlotRenderer/index.d.ts +1 -1
  119. package/dist/configSchema.d.ts +0 -18
  120. package/dist/configSchema.js +1 -23
  121. package/dist/drawDensity.d.ts +3 -3
  122. package/dist/drawDensity.js +0 -4
  123. package/dist/drawLine.d.ts +3 -3
  124. package/dist/drawLine.js +0 -5
  125. package/dist/drawXY.d.ts +4 -3
  126. package/dist/drawXY.js +28 -12
  127. package/dist/getMultiWiggleSourcesAutorun.d.ts +2 -2
  128. package/dist/getMultiWiggleSourcesAutorun.js +10 -7
  129. package/dist/getQuantitativeStats.d.ts +3 -3
  130. package/dist/getQuantitativeStats.js +2 -10
  131. package/dist/getQuantitativeStatsAutorun.d.ts +3 -3
  132. package/dist/getQuantitativeStatsAutorun.js +18 -20
  133. package/dist/index.d.ts +4 -4
  134. package/dist/index.js +21 -24
  135. package/dist/shared/SetMinMaxDialog.js +1 -1
  136. package/dist/shared/SharedWiggleConfigSchema.d.ts +0 -26
  137. package/dist/shared/SharedWiggleConfigSchema.js +1 -30
  138. package/dist/shared/SharedWiggleMixin.d.ts +20 -225
  139. package/dist/shared/SharedWiggleMixin.js +7 -177
  140. package/dist/util.d.ts +0 -28
  141. package/dist/util.js +1 -45
  142. package/esm/BigWigAdapter/BigWigAdapter.d.ts +4 -3
  143. package/esm/BigWigAdapter/BigWigAdapter.js +5 -10
  144. package/esm/BigWigAdapter/configSchema.d.ts +0 -9
  145. package/esm/BigWigAdapter/configSchema.js +1 -13
  146. package/esm/BigWigAdapter/index.d.ts +1 -1
  147. package/esm/CreateMultiWiggleExtension/ConfirmDialog.d.ts +1 -1
  148. package/esm/CreateMultiWiggleExtension/ConfirmDialog.js +2 -2
  149. package/esm/CreateMultiWiggleExtension/index.d.ts +1 -1
  150. package/esm/CreateMultiWiggleExtension/index.js +26 -26
  151. package/esm/DensityRenderer/DensityRenderer.d.ts +2 -1
  152. package/esm/DensityRenderer/DensityRenderer.js +1 -1
  153. package/esm/DensityRenderer/configSchema.js +1 -7
  154. package/esm/DensityRenderer/index.d.ts +1 -1
  155. package/esm/DensityRenderer/index.js +1 -1
  156. package/esm/LinePlotRenderer/LinePlotRenderer.d.ts +3 -2
  157. package/esm/LinePlotRenderer/LinePlotRenderer.js +1 -1
  158. package/esm/LinePlotRenderer/configSchema.d.ts +0 -3
  159. package/esm/LinePlotRenderer/configSchema.js +1 -10
  160. package/esm/LinePlotRenderer/index.d.ts +1 -1
  161. package/esm/LinearWiggleDisplay/components/SetColorDialog.js +2 -2
  162. package/esm/LinearWiggleDisplay/components/Tooltip.d.ts +2 -2
  163. package/esm/LinearWiggleDisplay/components/Tooltip.js +0 -1
  164. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  165. package/esm/LinearWiggleDisplay/components/WiggleDisplayComponent.js +3 -3
  166. package/esm/LinearWiggleDisplay/configSchema.d.ts +1 -12
  167. package/esm/LinearWiggleDisplay/configSchema.js +0 -15
  168. package/esm/LinearWiggleDisplay/index.d.ts +1 -1
  169. package/esm/LinearWiggleDisplay/index.js +1 -1
  170. package/esm/LinearWiggleDisplay/model.d.ts +13 -71
  171. package/esm/LinearWiggleDisplay/model.js +4 -53
  172. package/esm/LinearWiggleDisplay/renderSvg.d.ts +2 -2
  173. package/esm/LinearWiggleDisplay/renderSvg.js +1 -2
  174. package/esm/MultiDensityRenderer/MultiDensityRenderer.d.ts +4 -3
  175. package/esm/MultiDensityRenderer/MultiDensityRenderer.js +1 -2
  176. package/esm/MultiDensityRenderer/configSchema.js +1 -7
  177. package/esm/MultiDensityRenderer/index.d.ts +1 -1
  178. package/esm/MultiLineRenderer/MultiLineRenderer.d.ts +3 -2
  179. package/esm/MultiLineRenderer/MultiLineRenderer.js +1 -2
  180. package/esm/MultiLineRenderer/configSchema.d.ts +0 -6
  181. package/esm/MultiLineRenderer/configSchema.js +1 -13
  182. package/esm/MultiLineRenderer/index.d.ts +1 -1
  183. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.d.ts +1 -1
  184. package/esm/MultiLinearWiggleDisplay/components/ColorLegend.js +0 -1
  185. package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts +1 -1
  186. package/esm/MultiLinearWiggleDisplay/components/DraggableDialog.js +4 -8
  187. package/esm/MultiLinearWiggleDisplay/components/RectBg.js +1 -1
  188. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts +1 -1
  189. package/esm/MultiLinearWiggleDisplay/components/ScoreLegend.js +1 -1
  190. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts +1 -1
  191. package/esm/MultiLinearWiggleDisplay/components/SetColorDialog.js +4 -6
  192. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts +1 -1
  193. package/esm/MultiLinearWiggleDisplay/components/SourcesGrid.js +16 -27
  194. package/esm/MultiLinearWiggleDisplay/components/Tooltip.d.ts +3 -3
  195. package/esm/MultiLinearWiggleDisplay/components/Tooltip.js +1 -2
  196. package/esm/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts +1 -1
  197. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.d.ts +1 -1
  198. package/esm/MultiLinearWiggleDisplay/components/YScaleBars.js +2 -2
  199. package/esm/MultiLinearWiggleDisplay/components/util.d.ts +1 -1
  200. package/esm/MultiLinearWiggleDisplay/components/util.js +1 -1
  201. package/esm/MultiLinearWiggleDisplay/configSchema.d.ts +1 -10
  202. package/esm/MultiLinearWiggleDisplay/configSchema.js +1 -19
  203. package/esm/MultiLinearWiggleDisplay/index.d.ts +1 -1
  204. package/esm/MultiLinearWiggleDisplay/index.js +1 -1
  205. package/esm/MultiLinearWiggleDisplay/model.d.ts +17 -139
  206. package/esm/MultiLinearWiggleDisplay/model.js +14 -120
  207. package/esm/MultiLinearWiggleDisplay/renderSvg.d.ts +2 -2
  208. package/esm/MultiLinearWiggleDisplay/renderSvg.js +1 -1
  209. package/esm/MultiQuantitativeTrack/configSchema.d.ts +1 -1
  210. package/esm/MultiQuantitativeTrack/configSchema.js +1 -7
  211. package/esm/MultiQuantitativeTrack/index.d.ts +1 -1
  212. package/esm/MultiQuantitativeTrack/index.js +1 -1
  213. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.d.ts +3 -2
  214. package/esm/MultiRowLineRenderer/MultiRowLineRenderer.js +1 -2
  215. package/esm/MultiRowLineRenderer/configSchema.d.ts +0 -6
  216. package/esm/MultiRowLineRenderer/configSchema.js +2 -14
  217. package/esm/MultiRowLineRenderer/index.d.ts +1 -1
  218. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.d.ts +3 -2
  219. package/esm/MultiRowXYPlotRenderer/MultiRowXYPlotRenderer.js +1 -2
  220. package/esm/MultiRowXYPlotRenderer/configSchema.d.ts +0 -12
  221. package/esm/MultiRowXYPlotRenderer/configSchema.js +2 -20
  222. package/esm/MultiRowXYPlotRenderer/index.d.ts +1 -1
  223. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.d.ts +4 -3
  224. package/esm/MultiWiggleAdapter/MultiWiggleAdapter.js +9 -14
  225. package/esm/MultiWiggleAdapter/configSchema.d.ts +0 -6
  226. package/esm/MultiWiggleAdapter/configSchema.js +1 -10
  227. package/esm/MultiWiggleAdapter/index.d.ts +1 -1
  228. package/esm/MultiWiggleAdapter/index.js +1 -1
  229. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.d.ts +1 -1
  230. package/esm/MultiWiggleAddTrackWorkflow/AddTrackWorkflow.js +2 -4
  231. package/esm/MultiWiggleAddTrackWorkflow/index.d.ts +1 -1
  232. package/esm/MultiWiggleAddTrackWorkflow/index.js +1 -2
  233. package/esm/MultiWiggleRendering.d.ts +3 -3
  234. package/esm/MultiWiggleRendering.js +2 -2
  235. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.d.ts +3 -2
  236. package/esm/MultiXYPlotRenderer/MultiXYPlotRenderer.js +1 -2
  237. package/esm/MultiXYPlotRenderer/configSchema.d.ts +0 -12
  238. package/esm/MultiXYPlotRenderer/configSchema.js +1 -19
  239. package/esm/MultiXYPlotRenderer/index.d.ts +1 -1
  240. package/esm/QuantitativeTrack/configSchema.d.ts +1 -1
  241. package/esm/QuantitativeTrack/configSchema.js +1 -7
  242. package/esm/QuantitativeTrack/index.d.ts +1 -1
  243. package/esm/QuantitativeTrack/index.js +1 -1
  244. package/esm/Tooltip.d.ts +1 -1
  245. package/esm/Tooltip.js +1 -2
  246. package/esm/WiggleBaseRenderer.d.ts +5 -8
  247. package/esm/WiggleBaseRenderer.js +0 -1
  248. package/esm/WiggleRPC/MultiWiggleGetSources.d.ts +5 -12
  249. package/esm/WiggleRPC/MultiWiggleGetSources.js +2 -29
  250. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.d.ts +5 -7
  251. package/esm/WiggleRPC/WiggleGetGlobalQuantitativeStats.js +2 -15
  252. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.d.ts +4 -11
  253. package/esm/WiggleRPC/WiggleGetMultiRegionQuantitativeStats.js +2 -29
  254. package/esm/WiggleRendering.d.ts +2 -2
  255. package/esm/WiggleRendering.js +1 -3
  256. package/esm/XYPlotRenderer/XYPlotRenderer.d.ts +3 -2
  257. package/esm/XYPlotRenderer/XYPlotRenderer.js +3 -5
  258. package/esm/XYPlotRenderer/configSchema.d.ts +0 -12
  259. package/esm/XYPlotRenderer/configSchema.js +2 -20
  260. package/esm/XYPlotRenderer/index.d.ts +1 -1
  261. package/esm/configSchema.d.ts +0 -18
  262. package/esm/configSchema.js +1 -23
  263. package/esm/drawDensity.d.ts +3 -3
  264. package/esm/drawDensity.js +1 -5
  265. package/esm/drawLine.d.ts +3 -3
  266. package/esm/drawLine.js +1 -6
  267. package/esm/drawXY.d.ts +4 -3
  268. package/esm/drawXY.js +29 -13
  269. package/esm/getMultiWiggleSourcesAutorun.d.ts +2 -2
  270. package/esm/getMultiWiggleSourcesAutorun.js +9 -6
  271. package/esm/getQuantitativeStats.d.ts +3 -3
  272. package/esm/getQuantitativeStats.js +3 -11
  273. package/esm/getQuantitativeStatsAutorun.d.ts +3 -3
  274. package/esm/getQuantitativeStatsAutorun.js +18 -20
  275. package/esm/index.d.ts +4 -4
  276. package/esm/index.js +13 -16
  277. package/esm/shared/SetMinMaxDialog.js +1 -1
  278. package/esm/shared/SharedWiggleConfigSchema.d.ts +0 -26
  279. package/esm/shared/SharedWiggleConfigSchema.js +1 -30
  280. package/esm/shared/SharedWiggleMixin.d.ts +20 -225
  281. package/esm/shared/SharedWiggleMixin.js +8 -178
  282. package/esm/util.d.ts +0 -28
  283. package/esm/util.js +1 -45
  284. package/package.json +2 -4
@@ -1,2 +1,2 @@
1
- import PluginManager from '@jbrowse/core/PluginManager';
1
+ import type PluginManager from '@jbrowse/core/PluginManager';
2
2
  export default function MultiLinearWiggleDisplayF(pluginManager: PluginManager): void;
@@ -27,10 +27,10 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
27
27
  };
28
28
  Object.defineProperty(exports, "__esModule", { value: true });
29
29
  exports.default = MultiLinearWiggleDisplayF;
30
+ const react_1 = require("react");
30
31
  const DisplayType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/DisplayType"));
31
32
  const configSchema_1 = __importDefault(require("./configSchema"));
32
33
  const model_1 = __importDefault(require("./model"));
33
- const react_1 = require("react");
34
34
  function MultiLinearWiggleDisplayF(pluginManager) {
35
35
  pluginManager.addDisplayType(() => {
36
36
  const configSchema = (0, configSchema_1.default)(pluginManager);
@@ -1,14 +1,9 @@
1
- import { Instance } from 'mobx-state-tree';
2
- import { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
3
- import { Feature, AnyReactComponentType } from '@jbrowse/core/util';
4
- import PluginManager from '@jbrowse/core/PluginManager';
5
- import { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
6
- import { Source } from '../util';
7
- /**
8
- * #stateModel MultiLinearWiggleDisplay
9
- * extends
10
- * - [SharedWiggleMixin](../sharedwigglemixin)
11
- */
1
+ import type { Source } from '../util';
2
+ import type PluginManager from '@jbrowse/core/PluginManager';
3
+ import type { AnyConfigurationSchemaType } from '@jbrowse/core/configuration';
4
+ import type { AnyReactComponentType, Feature } from '@jbrowse/core/util';
5
+ import type { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
6
+ import type { Instance } from 'mobx-state-tree';
12
7
  export declare function stateModelFactory(pluginManager: PluginManager, configSchema: AnyConfigurationSchemaType): import("mobx-state-tree").IModelType<{
13
8
  id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
14
9
  type: import("mobx-state-tree").ISimpleType<string>;
@@ -21,21 +16,12 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
21
16
  } & {
22
17
  blockState: import("mobx-state-tree").IMapType<import("mobx-state-tree").IModelType<{
23
18
  key: import("mobx-state-tree").ISimpleType<string>;
24
- region: import("mobx-state-tree").IModelType<{
25
- refName: import("mobx-state-tree").ISimpleType<string>;
26
- start: import("mobx-state-tree").ISimpleType<number>;
27
- end: import("mobx-state-tree").ISimpleType<number>;
28
- reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
29
- } & {
30
- assemblyName: import("mobx-state-tree").ISimpleType<string>;
31
- }, {
32
- setRefName(newRefName: string): void;
33
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
19
+ region: import("mobx-state-tree").IType<import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region, import("@jbrowse/core/util").Region>;
34
20
  reloadFlag: import("mobx-state-tree").IType<number | undefined, number, number>;
35
21
  isLeftEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
36
22
  isRightEndOfDisplayedRegion: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
37
23
  }, {
38
- renderInProgress: AbortController | undefined;
24
+ stopToken: string | undefined;
39
25
  filled: boolean;
40
26
  reactElement: React.ReactElement | undefined;
41
27
  features: Map<string, Feature> | undefined;
@@ -59,15 +45,9 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
59
45
  doReload(): void;
60
46
  afterAttach(): void;
61
47
  setStatus(message: string): void;
62
- setLoading(abortController: AbortController): void;
48
+ setLoading(newStopToken: string): void;
63
49
  setMessage(messageText: string): void;
64
- setRendered(props: {
65
- reactElement: React.ReactElement;
66
- features: Map<string, Feature>;
67
- layout: any;
68
- maxHeightReached: boolean;
69
- renderProps: any;
70
- } | undefined): void;
50
+ setRendered(props: import("@jbrowse/plugin-linear-genome-view/src/BaseLinearDisplay/models/serverSideRenderedBlock").RenderedProps | undefined): void;
71
51
  setError(error: unknown): void;
72
52
  reload(): void;
73
53
  beforeDestroy(): void;
@@ -119,13 +99,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
119
99
  }, {}, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
120
100
  configuration: AnyConfigurationSchemaType;
121
101
  } & {
122
- /**
123
- * #property
124
- */
125
102
  type: import("mobx-state-tree").ISimpleType<"MultiLinearWiggleDisplay">;
126
- /**
127
- * #property
128
- */
129
103
  layout: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<Source[], Source[], Source[]>, [undefined]>;
130
104
  }, {
131
105
  rendererTypeName: string;
@@ -165,9 +139,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
165
139
  } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
166
140
  id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
167
141
  type: import("mobx-state-tree").ISimpleType<string>;
168
- rpcDriverName: import("mobx-state-tree" /**
169
- * #getter
170
- */).IMaybe<import("mobx-state-tree").ISimpleType<string>>;
142
+ rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
171
143
  }, {
172
144
  rendererTypeName: string;
173
145
  error: unknown;
@@ -218,6 +190,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
218
190
  readonly regionTooLarge: boolean;
219
191
  readonly regionTooLargeReason: string;
220
192
  } & {
193
+ readonly statsReadyAndRegionNotTooLarge: boolean;
221
194
  regionCannotBeRenderedText(_region: import("@jbrowse/core/util").Region): "" | "Force load to see features";
222
195
  regionCannotBeRendered(_region: import("@jbrowse/core/util").Region): import("react").JSX.Element | null;
223
196
  } & {
@@ -261,7 +234,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
261
234
  scoreMin: number;
262
235
  scoreMax: number;
263
236
  } | undefined;
264
- statsFetchInProgress: undefined | AbortController;
237
+ statsFetchInProgress: undefined | string;
265
238
  } & {
266
239
  updateQuantitativeStats(stats: {
267
240
  currStatsBpPerPx: number;
@@ -271,7 +244,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
271
244
  setColor(color?: string): void;
272
245
  setPosColor(color?: string): void;
273
246
  setNegColor(color?: string): void;
274
- setStatsLoading(aborter: AbortController): void;
247
+ setStatsLoading(arg?: string): void;
275
248
  selectFeature(feature: Feature): void;
276
249
  setResolution(res: number): void;
277
250
  setFill(fill: number): void;
@@ -301,9 +274,7 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
301
274
  } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
302
275
  setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
303
276
  [x: string]: any;
304
- } & import("mobx-state-tree/dist/internal" /**
305
- * #property
306
- */).NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
277
+ } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
307
278
  } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>);
308
279
  } & import("mobx-state-tree").IStateTreeNode<AnyConfigurationSchemaType>;
309
280
  readonly autoscaleType: any;
@@ -352,144 +323,54 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
352
323
  } & {
353
324
  reload(): Promise<void>;
354
325
  } & {
326
+ sourcesLoadingStopToken: string | undefined;
355
327
  featureUnderMouseVolatile: Feature | undefined;
356
328
  sourcesVolatile: Source[] | undefined;
357
329
  } & {
358
- /**
359
- * #action
360
- */
330
+ setSourcesLoading(str: string): void;
361
331
  setLayout(layout: Source[]): void;
362
- /**
363
- * #action
364
- */
365
332
  clearLayout(): void;
366
- /**
367
- * #action
368
- */
369
333
  setSources(sources: Source[]): void;
370
- /**
371
- * #action
372
- */
373
334
  setFeatureUnderMouse(f?: Feature): void;
374
335
  } & {
375
- /**
376
- * #getter
377
- */
378
336
  readonly featureUnderMouse: Feature | undefined;
379
- /**
380
- * #getter
381
- */
382
337
  readonly TooltipComponent: AnyReactComponentType;
383
- /**
384
- * #getter
385
- */
386
338
  readonly rendererTypeName: string;
387
339
  } & {
388
- /**
389
- * #getter
390
- */
391
340
  readonly needsScalebar: boolean;
392
- /**
393
- * #getter
394
- */
395
341
  readonly needsFullHeightScalebar: boolean;
396
- /**
397
- * #getter
398
- */
399
342
  readonly isMultiRow: boolean;
400
- /**
401
- * #getter
402
- * can be used to give it a "color scale" like a R heatmap, not
403
- * implemented like this yet but flag can be used for this
404
- */
405
343
  readonly needsCustomLegend: boolean;
406
- /**
407
- * #getter
408
- */
409
344
  readonly canHaveFill: boolean;
410
- /**
411
- * #getter
412
- * the multirowxy and multiline don't need to use colors on the legend
413
- * boxes since their track is drawn with the color. sort of a stylistic
414
- * choice
415
- */
416
345
  readonly renderColorBoxes: boolean;
417
- /**
418
- * #getter
419
- * positions multi-row below the tracklabel even if using overlap
420
- * tracklabels for everything else
421
- */
422
346
  readonly prefersOffset: boolean;
423
- /**
424
- * #getter
425
- */
426
347
  readonly sources: {
427
348
  color: string;
428
349
  baseUri?: string;
429
350
  name: string;
430
351
  group?: string;
431
352
  }[] | undefined;
432
- /**
433
- * #getter
434
- */
435
353
  readonly quantitativeStatsReady: boolean;
436
354
  } & {
437
- /**
438
- * #getter
439
- */
440
355
  readonly rowHeight: number;
441
- /**
442
- * #getter
443
- */
444
356
  readonly rowHeightTooSmallForScalebar: boolean;
445
- /**
446
- * #getter
447
- */
448
357
  readonly useMinimalTicks: any;
449
358
  } & {
450
- /**
451
- * #method
452
- */
453
359
  adapterProps(): any;
454
- /**
455
- * #getter
456
- */
457
360
  readonly ticks: {
458
361
  range: number[];
459
362
  values: number[];
460
363
  format: (d: import("d3-scale").NumberValue) => string;
461
364
  position: import("d3-scale").ScaleLinear<number, number, never> | import("d3-scale").ScaleQuantize<number, never>;
462
365
  } | undefined;
463
- /**
464
- * #getter
465
- */
466
366
  readonly colors: string[];
467
- /**
468
- * #getter
469
- * unused currently
470
- */
471
367
  readonly quantitativeStatsRelevantToCurrentZoom: boolean;
472
368
  } & {
473
- /**
474
- * #method
475
- */
476
369
  renderProps(): any;
477
- /**
478
- * #getter
479
- */
480
370
  readonly hasResolution: boolean;
481
- /**
482
- * #getter
483
- */
484
371
  readonly hasGlobalStats: boolean;
485
- /**
486
- * #getter
487
- */
488
372
  readonly fillSetting: 2 | 1 | 0;
489
373
  } & {
490
- /**
491
- * #method
492
- */
493
374
  trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
494
375
  label: string;
495
376
  subMenu: ({
@@ -536,9 +417,6 @@ export declare function stateModelFactory(pluginManager: PluginManager, configSc
536
417
  })[];
537
418
  } & {
538
419
  afterAttach(): void;
539
- /**
540
- * #action
541
- */
542
420
  renderSvg(opts: ExportSvgDisplayOptions): Promise<import("react").JSX.Element>;
543
421
  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
544
422
  export type WiggleDisplayStateModel = ReturnType<typeof stateModelFactory>;
@@ -28,21 +28,18 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
28
28
  Object.defineProperty(exports, "__esModule", { value: true });
29
29
  exports.stateModelFactory = stateModelFactory;
30
30
  const react_1 = require("react");
31
- const mobx_state_tree_1 = require("mobx-state-tree");
32
- const react_d3_axis_mod_1 = require("react-d3-axis-mod");
33
- const fast_deep_equal_1 = __importDefault(require("fast-deep-equal"));
34
- // jbrowse imports
35
31
  const configuration_1 = require("@jbrowse/core/configuration");
36
- const util_1 = require("@jbrowse/core/util");
37
32
  const colors_1 = require("@jbrowse/core/ui/colors");
38
- // locals
39
- const util_2 = require("../util");
33
+ const util_1 = require("@jbrowse/core/util");
34
+ const stopToken_1 = require("@jbrowse/core/util/stopToken");
35
+ const fast_deep_equal_1 = __importDefault(require("fast-deep-equal"));
36
+ const mobx_state_tree_1 = require("mobx-state-tree");
37
+ const react_d3_axis_mod_1 = require("react-d3-axis-mod");
40
38
  const SharedWiggleMixin_1 = __importDefault(require("../shared/SharedWiggleMixin"));
39
+ const util_2 = require("../util");
41
40
  const randomColor = () => '#000000'.replaceAll('0', () => (~~(Math.random() * 16)).toString(16));
42
- // lazies
43
41
  const Tooltip = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/Tooltip'))));
44
42
  const SetColorDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/SetColorDialog'))));
45
- // using a map because it preserves order
46
43
  const rendererTypes = new Map([
47
44
  ['xyplot', 'MultiXYPlotRenderer'],
48
45
  ['multirowxy', 'MultiRowXYPlotRenderer'],
@@ -50,71 +47,46 @@ const rendererTypes = new Map([
50
47
  ['multiline', 'MultiLineRenderer'],
51
48
  ['multirowline', 'MultiRowLineRenderer'],
52
49
  ]);
53
- /**
54
- * #stateModel MultiLinearWiggleDisplay
55
- * extends
56
- * - [SharedWiggleMixin](../sharedwigglemixin)
57
- */
58
50
  function stateModelFactory(pluginManager, configSchema) {
59
51
  return mobx_state_tree_1.types
60
52
  .compose('MultiLinearWiggleDisplay', (0, SharedWiggleMixin_1.default)(configSchema), mobx_state_tree_1.types.model({
61
- /**
62
- * #property
63
- */
64
53
  type: mobx_state_tree_1.types.literal('MultiLinearWiggleDisplay'),
65
- /**
66
- * #property
67
- */
68
54
  layout: mobx_state_tree_1.types.optional(mobx_state_tree_1.types.frozen(), []),
69
55
  }))
70
56
  .volatile(() => ({
57
+ sourcesLoadingStopToken: undefined,
71
58
  featureUnderMouseVolatile: undefined,
72
59
  sourcesVolatile: undefined,
73
60
  }))
74
61
  .actions(self => ({
75
- /**
76
- * #action
77
- */
62
+ setSourcesLoading(str) {
63
+ if (self.sourcesLoadingStopToken) {
64
+ (0, stopToken_1.stopStopToken)(self.sourcesLoadingStopToken);
65
+ }
66
+ self.sourcesLoadingStopToken = str;
67
+ },
78
68
  setLayout(layout) {
79
69
  self.layout = layout;
80
70
  },
81
- /**
82
- * #action
83
- */
84
71
  clearLayout() {
85
72
  self.layout = [];
86
73
  },
87
- /**
88
- * #action
89
- */
90
74
  setSources(sources) {
91
75
  if (!(0, fast_deep_equal_1.default)(sources, self.sourcesVolatile)) {
92
76
  self.sourcesVolatile = sources;
93
77
  }
94
78
  },
95
- /**
96
- * #action
97
- */
98
79
  setFeatureUnderMouse(f) {
99
80
  self.featureUnderMouseVolatile = f;
100
81
  },
101
82
  }))
102
83
  .views(self => ({
103
- /**
104
- * #getter
105
- */
106
84
  get featureUnderMouse() {
107
85
  return self.featureUnderMouseVolatile;
108
86
  },
109
- /**
110
- * #getter
111
- */
112
87
  get TooltipComponent() {
113
88
  return Tooltip;
114
89
  },
115
- /**
116
- * #getter
117
- */
118
90
  get rendererTypeName() {
119
91
  const name = self.rendererTypeNameSimple;
120
92
  const rendererType = rendererTypes.get(name);
@@ -125,66 +97,35 @@ function stateModelFactory(pluginManager, configSchema) {
125
97
  },
126
98
  }))
127
99
  .views(self => ({
128
- /**
129
- * #getter
130
- */
131
100
  get needsScalebar() {
132
101
  return (self.rendererTypeName === 'MultiXYPlotRenderer' ||
133
102
  self.rendererTypeName === 'MultiRowXYPlotRenderer' ||
134
103
  self.rendererTypeName === 'MultiLineRenderer' ||
135
104
  self.rendererTypeName === 'MultiRowLineRenderer');
136
105
  },
137
- /**
138
- * #getter
139
- */
140
106
  get needsFullHeightScalebar() {
141
107
  return (self.rendererTypeName === 'MultiXYPlotRenderer' ||
142
108
  self.rendererTypeName === 'MultiLineRenderer');
143
109
  },
144
- /**
145
- * #getter
146
- */
147
110
  get isMultiRow() {
148
111
  return (self.rendererTypeName === 'MultiRowXYPlotRenderer' ||
149
112
  self.rendererTypeName === 'MultiRowLineRenderer' ||
150
113
  self.rendererTypeName === 'MultiDensityRenderer');
151
114
  },
152
- /**
153
- * #getter
154
- * can be used to give it a "color scale" like a R heatmap, not
155
- * implemented like this yet but flag can be used for this
156
- */
157
115
  get needsCustomLegend() {
158
116
  return self.rendererTypeName === 'MultiDensityRenderer';
159
117
  },
160
- /**
161
- * #getter
162
- */
163
118
  get canHaveFill() {
164
119
  return (self.rendererTypeName === 'MultiXYPlotRenderer' ||
165
120
  self.rendererTypeName === 'MultiRowXYPlotRenderer');
166
121
  },
167
- /**
168
- * #getter
169
- * the multirowxy and multiline don't need to use colors on the legend
170
- * boxes since their track is drawn with the color. sort of a stylistic
171
- * choice
172
- */
173
122
  get renderColorBoxes() {
174
123
  return !(self.rendererTypeName === 'MultiRowLineRenderer' ||
175
124
  self.rendererTypeName === 'MultiRowXYPlotRenderer');
176
125
  },
177
- /**
178
- * #getter
179
- * positions multi-row below the tracklabel even if using overlap
180
- * tracklabels for everything else
181
- */
182
126
  get prefersOffset() {
183
127
  return this.isMultiRow;
184
128
  },
185
- /**
186
- * #getter
187
- */
188
129
  get sources() {
189
130
  var _a;
190
131
  const sources = Object.fromEntries(((_a = self.sourcesVolatile) === null || _a === void 0 ? void 0 : _a.map(s => [s.name, s])) || []);
@@ -198,34 +139,19 @@ function stateModelFactory(pluginManager, configSchema) {
198
139
  (!this.isMultiRow ? colors_1.set1[i] || randomColor() : 'blue'),
199
140
  }));
200
141
  },
201
- /**
202
- * #getter
203
- */
204
142
  get quantitativeStatsReady() {
205
143
  const view = (0, util_1.getContainingView)(self);
206
- return (view.initialized &&
207
- self.featureDensityStatsReady &&
208
- !self.regionTooLarge &&
209
- !self.error);
144
+ return (view.initialized && self.statsReadyAndRegionNotTooLarge && !self.error);
210
145
  },
211
146
  }))
212
147
  .views(self => ({
213
- /**
214
- * #getter
215
- */
216
148
  get rowHeight() {
217
149
  const { sources, height, isMultiRow } = self;
218
150
  return isMultiRow ? height / ((sources === null || sources === void 0 ? void 0 : sources.length) || 1) : height;
219
151
  },
220
- /**
221
- * #getter
222
- */
223
152
  get rowHeightTooSmallForScalebar() {
224
153
  return this.rowHeight < 70;
225
154
  },
226
- /**
227
- * #getter
228
- */
229
155
  get useMinimalTicks() {
230
156
  return ((0, configuration_1.getConf)(self, 'minimalTicks') || this.rowHeightTooSmallForScalebar);
231
157
  },
@@ -233,9 +159,6 @@ function stateModelFactory(pluginManager, configSchema) {
233
159
  .views(self => {
234
160
  const { renderProps: superRenderProps } = self;
235
161
  return {
236
- /**
237
- * #method
238
- */
239
162
  adapterProps() {
240
163
  const superProps = superRenderProps();
241
164
  return {
@@ -248,9 +171,6 @@ function stateModelFactory(pluginManager, configSchema) {
248
171
  sources: self.sources,
249
172
  };
250
173
  },
251
- /**
252
- * #getter
253
- */
254
174
  get ticks() {
255
175
  const { scaleType, domain, isMultiRow, rowHeight, useMinimalTicks } = self;
256
176
  if (!domain) {
@@ -265,9 +185,6 @@ function stateModelFactory(pluginManager, configSchema) {
265
185
  }), 4);
266
186
  return useMinimalTicks ? { ...ticks, values: domain } : ticks;
267
187
  },
268
- /**
269
- * #getter
270
- */
271
188
  get colors() {
272
189
  return [
273
190
  'red',
@@ -282,10 +199,6 @@ function stateModelFactory(pluginManager, configSchema) {
282
199
  'pink',
283
200
  ];
284
201
  },
285
- /**
286
- * #getter
287
- * unused currently
288
- */
289
202
  get quantitativeStatsRelevantToCurrentZoom() {
290
203
  var _a;
291
204
  const view = (0, util_1.getContainingView)(self);
@@ -294,9 +207,6 @@ function stateModelFactory(pluginManager, configSchema) {
294
207
  };
295
208
  })
296
209
  .views(self => ({
297
- /**
298
- * #method
299
- */
300
210
  renderProps() {
301
211
  const superProps = self.adapterProps();
302
212
  return {
@@ -317,21 +227,12 @@ function stateModelFactory(pluginManager, configSchema) {
317
227
  },
318
228
  };
319
229
  },
320
- /**
321
- * #getter
322
- */
323
230
  get hasResolution() {
324
231
  return self.adapterCapabilities.includes('hasResolution');
325
232
  },
326
- /**
327
- * #getter
328
- */
329
233
  get hasGlobalStats() {
330
234
  return self.adapterCapabilities.includes('hasGlobalStats');
331
235
  },
332
- /**
333
- * #getter
334
- */
335
236
  get fillSetting() {
336
237
  if (self.filled) {
337
238
  return 0;
@@ -348,9 +249,6 @@ function stateModelFactory(pluginManager, configSchema) {
348
249
  const { trackMenuItems: superTrackMenuItems } = self;
349
250
  const hasRenderings = (0, configuration_1.getConf)(self, 'defaultRendering');
350
251
  return {
351
- /**
352
- * #method
353
- */
354
252
  trackMenuItems() {
355
253
  return [
356
254
  ...superTrackMenuItems(),
@@ -423,7 +321,6 @@ function stateModelFactory(pluginManager, configSchema) {
423
321
  const { renderSvg: superRenderSvg } = self;
424
322
  return {
425
323
  afterAttach() {
426
- // eslint-disable-next-line @typescript-eslint/no-floating-promises
427
324
  ;
428
325
  (async () => {
429
326
  try {
@@ -442,9 +339,6 @@ function stateModelFactory(pluginManager, configSchema) {
442
339
  }
443
340
  })();
444
341
  },
445
- /**
446
- * #action
447
- */
448
342
  async renderSvg(opts) {
449
343
  const { renderSvg } = await Promise.resolve().then(() => __importStar(require('./renderSvg')));
450
344
  return renderSvg(self, opts, superRenderSvg);
@@ -1,4 +1,4 @@
1
1
  import React from 'react';
2
- import { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
3
- import { WiggleDisplayModel } from './model';
2
+ import type { WiggleDisplayModel } from './model';
3
+ import type { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
4
4
  export declare function renderSvg(self: WiggleDisplayModel, opts: ExportSvgDisplayOptions, superRenderSvg: (opts: ExportSvgDisplayOptions) => Promise<React.ReactNode>): Promise<React.JSX.Element>;
@@ -12,7 +12,7 @@ async function renderSvg(self, opts, superRenderSvg) {
12
12
  await (0, mobx_1.when)(() => !!self.stats && !!self.regionCannotBeRenderedText);
13
13
  const { offsetPx } = (0, util_1.getContainingView)(self);
14
14
  return (react_1.default.createElement(react_1.default.Fragment, null,
15
- react_1.default.createElement("g", { id: "snpcov" }, await superRenderSvg(opts)),
15
+ react_1.default.createElement("g", null, await superRenderSvg(opts)),
16
16
  react_1.default.createElement("g", { transform: `translate(${Math.max(-offsetPx, 0)})` },
17
17
  react_1.default.createElement(YScaleBars_1.default, { model: self, orientation: "left", exportSVG: true }))));
18
18
  }
@@ -1,4 +1,4 @@
1
- import PluginManager from '@jbrowse/core/PluginManager';
1
+ import type PluginManager from '@jbrowse/core/PluginManager';
2
2
  declare const configSchema: (pluginManager: PluginManager) => import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{}, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
3
3
  name: {
4
4
  description: string;
@@ -2,15 +2,9 @@
2
2
  Object.defineProperty(exports, "__esModule", { value: true });
3
3
  const configuration_1 = require("@jbrowse/core/configuration");
4
4
  const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
5
- /**
6
- * #config MultiQuantitativeTrack
7
- */
8
- function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
5
+ function x() { }
9
6
  const configSchema = (pluginManager) => {
10
7
  return (0, configuration_1.ConfigurationSchema)('MultiQuantitativeTrack', {}, {
11
- /**
12
- * #baseConfiguration
13
- */
14
8
  baseConfiguration: (0, models_1.createBaseTrackConfig)(pluginManager),
15
9
  });
16
10
  };
@@ -1,2 +1,2 @@
1
- import PluginManager from '@jbrowse/core/PluginManager';
1
+ import type PluginManager from '@jbrowse/core/PluginManager';
2
2
  export default function MultiQuantitativeTrackF(pluginManager: PluginManager): void;
@@ -4,8 +4,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
4
4
  };
5
5
  Object.defineProperty(exports, "__esModule", { value: true });
6
6
  exports.default = MultiQuantitativeTrackF;
7
- const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
8
7
  const TrackType_1 = __importDefault(require("@jbrowse/core/pluggableElementTypes/TrackType"));
8
+ const models_1 = require("@jbrowse/core/pluggableElementTypes/models");
9
9
  const configSchema_1 = __importDefault(require("./configSchema"));
10
10
  function MultiQuantitativeTrackF(pluginManager) {
11
11
  pluginManager.addTrackType(() => {
@@ -1,5 +1,6 @@
1
- import { Feature } from '@jbrowse/core/util';
2
- import WiggleBaseRenderer, { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
1
+ import WiggleBaseRenderer from '../WiggleBaseRenderer';
2
+ import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
3
+ import type { Feature } from '@jbrowse/core/util';
3
4
  export default class MultiRowLineRenderer extends WiggleBaseRenderer {
4
5
  draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
5
6
  reducedFeatures: Feature[];