@jbrowse/plugin-wiggle 2.17.0 → 2.18.0

package/dist/LinearWiggleDisplay/model.js

@@ -31,41 +31,24 @@ const configuration_1 = require("@jbrowse/core/configuration");
 const util_1 = require("@jbrowse/core/util");
 const mobx_state_tree_1 = require("mobx-state-tree");
 const react_d3_axis_mod_1 = require("react-d3-axis-mod");
-// locals
-const util_2 = require("../util");
 const SharedWiggleMixin_1 = __importDefault(require("../shared/SharedWiggleMixin"));
-// lazies
+const util_2 = require("../util");
 const Tooltip = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/Tooltip'))));
 const SetColorDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./components/SetColorDialog'))));
-// using a map because it preserves order
 const rendererTypes = new Map([
     ['xyplot', 'XYPlotRenderer'],
     ['density', 'DensityRenderer'],
     ['line', 'LinePlotRenderer'],
 ]);
-/**
- * #stateModel LinearWiggleDisplay
- * extends
- * - [SharedWiggleMixin](../sharedwigglemixin)
- */
 function stateModelFactory(pluginManager, configSchema) {
     return mobx_state_tree_1.types
         .compose('LinearWiggleDisplay', (0, SharedWiggleMixin_1.default)(configSchema), mobx_state_tree_1.types.model({
-        /**
-         * #property
-         */
         type: mobx_state_tree_1.types.literal('LinearWiggleDisplay'),
     }))
         .views(self => ({
-        /**
-         * #getter
-         */
         get TooltipComponent() {
             return Tooltip;
         },
-        /**
-         * #getter
-         */
         get rendererTypeName() {
             const name = self.rendererTypeNameSimple;
             const rendererType = rendererTypes.get(name);
@@ -74,10 +57,6 @@ function stateModelFactory(pluginManager, configSchema) {
             }
             return rendererType;
         },
-        /**
-         * #getter
-         * unused currently
-         */
         get quantitativeStatsRelevantToCurrentZoom() {
             var _a;
             const view = (0, util_1.getContainingView)(self);
@@ -87,9 +66,6 @@ function stateModelFactory(pluginManager, configSchema) {
         .views(self => {
         const { renderProps: superRenderProps } = self;
         return {
-            /**
-             * #method
-             */
             adapterProps() {
                 const superProps = superRenderProps();
                 const { filters, resolution, scaleOpts } = self;
@@ -104,9 +80,6 @@ function stateModelFactory(pluginManager, configSchema) {
                     filters,
                 };
             },
-            /**
-             * #getter
-             */
             get ticks() {
                 const { scaleType, domain, height } = self;
                 const minimalTicks = (0, configuration_1.getConf)(self, 'minimalTicks');
@@ -132,9 +105,6 @@ function stateModelFactory(pluginManager, configSchema) {
         };
     })
         .views(self => ({
-        /**
-         * #method
-         */
         renderProps() {
             const { ticks, height } = self;
             const superProps = self.adapterProps();
@@ -145,16 +115,10 @@ function stateModelFactory(pluginManager, configSchema) {
                 ticks,
             };
         },
-        /**
-         * #getter
-         */
         get needsScalebar() {
             return (self.rendererTypeName === 'XYPlotRenderer' ||
                 self.rendererTypeName === 'LinePlotRenderer');
         },
-        /**
-         * #getter
-         */
         get fillSetting() {
             if (self.filled) {
                 return 0;
@@ -166,24 +130,15 @@ function stateModelFactory(pluginManager, configSchema) {
                 return 2;
             }
         },
-        /**
-         * #getter
-         */
         get quantitativeStatsReady() {
             const view = (0, util_1.getContainingView)(self);
-            return (view.initialized &&
-                self.featureDensityStatsReady &&
-                !self.regionTooLarge &&
-                !self.error);
+            return (view.initialized && self.statsReadyAndRegionNotTooLarge && !self.error);
         },
     }))
         .views(self => {
         const { trackMenuItems: superTrackMenuItems } = self;
         const hasRenderings = (0, configuration_1.getConf)(self, 'defaultRendering');
         return {
-            /**
-             * #method
-             */
             trackMenuItems() {
                 return [
                     ...superTrackMenuItems(),
@@ -253,16 +208,12 @@ function stateModelFactory(pluginManager, configSchema) {
         const { renderSvg: superRenderSvg } = self;
         return {
             afterAttach() {
-                // eslint-disable-next-line @typescript-eslint/no-floating-promises
                 ;
                 (async () => {
                     const { getQuantitativeStatsAutorun } = await Promise.resolve().then(() => __importStar(require('../getQuantitativeStatsAutorun')));
                     getQuantitativeStatsAutorun(self);
                 })();
             },
-            /**
-             * #action
-             */
             async renderSvg(opts) {
                 const { renderSvg } = await Promise.resolve().then(() => __importStar(require('./renderSvg')));
                 return renderSvg(self, opts, superRenderSvg);

package/dist/LinearWiggleDisplay/renderSvg.d.ts

@@ -1,4 +1,4 @@
 import React from 'react';
-import { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
-import { WiggleDisplayModel } from './model';
+import type { WiggleDisplayModel } from './model';
+import type { ExportSvgDisplayOptions } from '@jbrowse/plugin-linear-genome-view';
 export declare function renderSvg(self: WiggleDisplayModel, opts: ExportSvgDisplayOptions, superRenderSvg: (opts: ExportSvgDisplayOptions) => Promise<React.ReactNode>): Promise<React.JSX.Element>;

package/dist/LinearWiggleDisplay/renderSvg.js

@@ -7,14 +7,13 @@ exports.renderSvg = renderSvg;
 const react_1 = __importDefault(require("react"));
 const util_1 = require("@jbrowse/core/util");
 const mobx_1 = require("mobx");
-// locals
 const YScaleBar_1 = __importDefault(require("../shared/YScaleBar"));
 async function renderSvg(self, opts, superRenderSvg) {
     await (0, mobx_1.when)(() => !!self.stats && !!self.regionCannotBeRenderedText);
     const { needsScalebar, stats } = self;
     const { offsetPx } = (0, util_1.getContainingView)(self);
     return (react_1.default.createElement(react_1.default.Fragment, null,
-        react_1.default.createElement("g", { id: "snpcov" }, await superRenderSvg(opts)),
+        react_1.default.createElement("g", null, await superRenderSvg(opts)),
         needsScalebar && stats ? (react_1.default.createElement("g", { transform: `translate(${Math.max(-offsetPx, 0)})` },
             react_1.default.createElement(YScaleBar_1.default, { model: self, orientation: "left" }))) : null));
 }

package/dist/MultiDensityRenderer/MultiDensityRenderer.d.ts

@@ -1,6 +1,7 @@
-import { Feature } from '@jbrowse/core/util';
-import WiggleBaseRenderer, { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
-export default class MultiXYPlotRenderer extends WiggleBaseRenderer {
+import WiggleBaseRenderer from '../WiggleBaseRenderer';
+import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
+import type { Feature } from '@jbrowse/core/util';
+export default class MultiDensityPlotRenderer extends WiggleBaseRenderer {
     draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
         reducedFeatures: Feature[];
     }>;

package/dist/MultiDensityRenderer/MultiDensityRenderer.js

@@ -6,8 +6,7 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const util_1 = require("@jbrowse/core/util");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
 const drawDensity_1 = require("../drawDensity");
-class MultiXYPlotRenderer extends WiggleBaseRenderer_1.default {
-    // @ts-expect-error
+class MultiDensityPlotRenderer extends WiggleBaseRenderer_1.default {
     async draw(ctx, props) {
         const { sources, features } = props;
         const groups = (0, util_1.groupBy)(features.values(), f => f.get('source'));
@@ -28,4 +27,4 @@ class MultiXYPlotRenderer extends WiggleBaseRenderer_1.default {
         return { reducedFeatures: feats };
     }
 }
-exports.default = MultiXYPlotRenderer;
+exports.default = MultiDensityPlotRenderer;

package/dist/MultiDensityRenderer/configSchema.js

@@ -5,14 +5,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 const configSchema_1 = __importDefault(require("../configSchema"));
-/**
- * #config MultiDensityRenderer
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const configSchema = (0, configuration_1.ConfigurationSchema)('MultiDensityRenderer', {}, {
-    /**
-     * #baseConfiguration
-     */
     baseConfiguration: configSchema_1.default,
     explicitlyTyped: true,
 });

package/dist/MultiDensityRenderer/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function MultiDensityRendererF(pluginManager: PluginManager): void;

package/dist/MultiLineRenderer/MultiLineRenderer.d.ts

@@ -1,5 +1,6 @@
-import { Feature } from '@jbrowse/core/util';
-import WiggleBaseRenderer, { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
+import WiggleBaseRenderer from '../WiggleBaseRenderer';
+import type { MultiRenderArgsDeserialized as MultiArgs } from '../WiggleBaseRenderer';
+import type { Feature } from '@jbrowse/core/util';
 export default class MultiLineRenderer extends WiggleBaseRenderer {
     draw(ctx: CanvasRenderingContext2D, props: MultiArgs): Promise<{
         reducedFeatures: Feature[];

package/dist/MultiLineRenderer/MultiLineRenderer.js

@@ -4,10 +4,9 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const util_1 = require("@jbrowse/core/util");
-const drawLine_1 = require("../drawLine");
 const WiggleBaseRenderer_1 = __importDefault(require("../WiggleBaseRenderer"));
+const drawLine_1 = require("../drawLine");
 class MultiLineRenderer extends WiggleBaseRenderer_1.default {
-    // @ts-expect-error
     async draw(ctx, props) {
         const { sources, features } = props;
         const groups = (0, util_1.groupBy)(features.values(), f => f.get('source'));

package/dist/MultiLineRenderer/configSchema.d.ts

@@ -1,15 +1,9 @@
 declare const configSchema: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     displayCrossHatches: {
         type: string;
         description: string;
         defaultValue: boolean;
     };
-    /**
-     * #slot
-     */
     summaryScoreMode: {
         type: string;
         model: import("mobx-state-tree").ISimpleType<string>;

package/dist/MultiLineRenderer/configSchema.js

@@ -6,22 +6,13 @@ Object.defineProperty(exports, "__esModule", { value: true });
 const configuration_1 = require("@jbrowse/core/configuration");
 const mobx_state_tree_1 = require("mobx-state-tree");
 const configSchema_1 = __importDefault(require("../configSchema"));
-/**
- * #config MultiLineRenderer
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 const configSchema = (0, configuration_1.ConfigurationSchema)('MultiLineRenderer', {
-    /**
-     * #slot
-     */
     displayCrossHatches: {
         type: 'boolean',
         description: 'choose to draw cross hatches (sideways lines)',
         defaultValue: false,
     },
-    /**
-     * #slot
-     */
     summaryScoreMode: {
         type: 'stringEnum',
         model: mobx_state_tree_1.types.enumeration('Score type', ['max', 'min', 'avg', 'whiskers']),
@@ -29,9 +20,6 @@ const configSchema = (0, configuration_1.ConfigurationSchema)('MultiLineRenderer
         defaultValue: 'avg',
     },
 }, {
-    /**
-     * #baseConfiguration
-     */
     baseConfiguration: configSchema_1.default,
     explicitlyTyped: true,
 });

package/dist/MultiLineRenderer/index.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function MultiLineRendererF(pluginManager: PluginManager): void;

package/dist/MultiLinearWiggleDisplay/components/ColorLegend.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { WiggleDisplayModel } from '../model';
+import type { WiggleDisplayModel } from '../model';
 declare const ColorLegend: ({ model, rowHeight, labelWidth, exportSVG, }: {
     model: WiggleDisplayModel;
     rowHeight: number;

package/dist/MultiLinearWiggleDisplay/components/ColorLegend.js

@@ -15,7 +15,6 @@ const ColorLegend = (0, mobx_react_1.observer)(function ({ model, rowHeight, lab
     const svgOffset = exportSVG ? 10 : 0;
     const extraOffset = svgOffset || (needsScalebar && !rowHeightTooSmallForScalebar ? 50 : 0);
     return sources ? (react_1.default.createElement(react_1.default.Fragment, null,
-        /* 0.25 for hanging letters like g */
         needsFullHeightScalebar ? (react_1.default.createElement(RectBg_1.default, { y: 0, x: extraOffset, width: legendWidth, height: (sources.length + 0.25) * rowHeight })) : null,
         sources.map((source, idx) => {
             const boxHeight = Math.min(20, rowHeight);

package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { DialogProps } from '@mui/material';
+import type { DialogProps } from '@mui/material';
 declare const DraggableDialog: (props: DialogProps & {
     title: string;
 }) => React.JSX.Element;

package/dist/MultiLinearWiggleDisplay/components/DraggableDialog.js

@@ -27,12 +27,11 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const react_1 = __importStar(require("react"));
+const Close_1 = __importDefault(require("@mui/icons-material/Close"));
 const material_1 = require("@mui/material");
 const mobx_react_1 = require("mobx-react");
-const mui_1 = require("tss-react/mui");
 const react_draggable_1 = __importDefault(require("react-draggable"));
-// icons
-const Close_1 = __importDefault(require("@mui/icons-material/Close"));
+const mui_1 = require("tss-react/mui");
 const useStyles = (0, mui_1.makeStyles)()(theme => ({
     closeButton: {
         position: 'absolute',
@@ -43,9 +42,7 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
 }));
 function PaperComponent(props) {
     const ref = (0, react_1.useRef)(null);
-    return (react_1.default.createElement(react_draggable_1.default, { nodeRef: ref, cancel: '[class*="MuiDialogContent-root"]', 
-        // @ts-expect-error
-        onStart: arg => { var _a, _b; return (_b = (_a = arg.target) === null || _a === void 0 ? void 0 : _a.className) === null || _b === void 0 ? void 0 : _b.includes('MuiDialogTitle'); } },
+    return (react_1.default.createElement(react_draggable_1.default, { nodeRef: ref, cancel: '[class*="MuiDialogContent-root"]', onStart: arg => { var _a, _b; return (_b = (_a = arg.target) === null || _a === void 0 ? void 0 : _a.className) === null || _b === void 0 ? void 0 : _b.includes('MuiDialogTitle'); } },
         react_1.default.createElement(material_1.Paper, { ref: ref, ...props })));
 }
 const DraggableDialog = (0, mobx_react_1.observer)(function DraggableDialog(props) {
@@ -56,7 +53,6 @@ const DraggableDialog = (0, mobx_react_1.observer)(function DraggableDialog(prop
             react_1.default.createElement(material_1.DialogTitle, { style: { cursor: 'move' } },
                 title,
                 onClose ? (react_1.default.createElement(material_1.IconButton, { className: classes.closeButton, onClick: () => {
-                        // @ts-expect-error
                         onClose();
                     } },
                     react_1.default.createElement(Close_1.default, null))) : null),

package/dist/MultiLinearWiggleDisplay/components/RectBg.js

@@ -3,8 +3,8 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-const util_1 = require("@jbrowse/core/util");
 const react_1 = __importDefault(require("react"));
+const util_1 = require("@jbrowse/core/util");
 const RectBg = (props) => {
     const { color = 'rgb(255,255,255,0.8)' } = props;
     return react_1.default.createElement("rect", { ...props, ...(0, util_1.getFillProps)(color) });

package/dist/MultiLinearWiggleDisplay/components/ScoreLegend.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { WiggleDisplayModel } from '../model';
+import type { WiggleDisplayModel } from '../model';
 declare const ScoreLegend: ({ model }: {
     model: WiggleDisplayModel;
 }) => React.JSX.Element;

package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { Source } from '../../util';
+import type { Source } from '../../util';
 export default function SetColorDialog({ model, handleClose, }: {
     model: {
         sources?: Source[];

package/dist/MultiLinearWiggleDisplay/components/SetColorDialog.js

@@ -28,11 +28,9 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.default = SetColorDialog;
 const react_1 = __importStar(require("react"));
+const util_1 = require("@jbrowse/core/util");
 const material_1 = require("@mui/material");
 const mui_1 = require("tss-react/mui");
-const util_1 = require("@jbrowse/core/util");
-const clone_1 = __importDefault(require("clone"));
-// locals
 const DraggableDialog_1 = __importDefault(require("./DraggableDialog"));
 const SourcesGrid_1 = __importDefault(require("./SourcesGrid"));
 const useStyles = (0, mui_1.makeStyles)()({
@@ -43,8 +41,8 @@ const useStyles = (0, mui_1.makeStyles)()({
 function SetColorDialog({ model, handleClose, }) {
     const { classes } = useStyles();
     const { sources } = model;
-    const [currLayout, setCurrLayout] = (0, react_1.useState)((0, clone_1.default)(sources || []));
-    const [showTips, setShowTips] = (0, util_1.useLocalStorage)('multiwiggle-showTips', true);
+    const [currLayout, setCurrLayout] = (0, react_1.useState)(structuredClone(sources || []));
+    const [showTips, setShowTips] = (0, util_1.useLocalStorage)('multiwiggle-showTips', false);
     return (react_1.default.createElement(DraggableDialog_1.default, { open: true, onClose: handleClose, maxWidth: "xl", title: 'Multi-wiggle color/arrangement editor' },
         react_1.default.createElement(material_1.DialogContent, { className: classes.content },
             react_1.default.createElement(material_1.Button, { variant: "contained", style: { float: 'right' }, onClick: () => {

package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { Source } from '../../util';
+import type { Source } from '../../util';
 declare function SourcesGrid({ rows, onChange, showTips, }: {
     rows: Source[];
     onChange: (arg: Source[]) => void;

package/dist/MultiLinearWiggleDisplay/components/SourcesGrid.js

@@ -27,19 +27,17 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 const react_1 = __importStar(require("react"));
-const material_1 = require("@mui/material");
+const ui_1 = require("@jbrowse/core/ui");
+const ColorPicker_1 = __importStar(require("@jbrowse/core/ui/ColorPicker"));
 const util_1 = require("@jbrowse/core/util");
+const KeyboardArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardArrowDown"));
+const KeyboardArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardArrowUp"));
+const KeyboardDoubleArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowDown"));
+const KeyboardDoubleArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowUp"));
+const material_1 = require("@mui/material");
 const x_data_grid_1 = require("@mui/x-data-grid");
 const mui_1 = require("tss-react/mui");
-const ColorPicker_1 = __importStar(require("@jbrowse/core/ui/ColorPicker"));
-const ui_1 = require("@jbrowse/core/ui");
-// locals
 const util_2 = require("./util");
-// icons
-const KeyboardDoubleArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowUp"));
-const KeyboardDoubleArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardDoubleArrowDown"));
-const KeyboardArrowDown_1 = __importDefault(require("@mui/icons-material/KeyboardArrowDown"));
-const KeyboardArrowUp_1 = __importDefault(require("@mui/icons-material/KeyboardArrowUp"));
 const useStyles = (0, mui_1.makeStyles)()({
     cell: {
         whiteSpace: 'nowrap',
@@ -100,16 +98,13 @@ function SourcesGrid({ rows, onChange, showTips, }) {
                     {
                         field: 'color',
                         headerName: 'Color',
-                        renderCell: params => {
-                            const { value, id } = params;
-                            return (react_1.default.createElement(ColorPicker_1.default, { color: value || 'blue', onChange: c => {
-                                    const elt = rows.find(f => f.name === id);
-                                    if (elt) {
-                                        elt.color = c;
-                                    }
-                                    onChange([...rows]);
-                                } }));
-                        },
+                        renderCell: ({ value, id }) => (react_1.default.createElement(ColorPicker_1.default, { color: value || 'blue', onChange: c => {
+                                const elt = rows.find(f => f.name === id);
+                                if (elt) {
+                                    elt.color = c;
+                                }
+                                onChange([...rows]);
+                            } })),
                     },
                     {
                         field: 'name',
@@ -122,14 +117,8 @@ function SourcesGrid({ rows, onChange, showTips, }) {
                             react_1.default.createElement(ui_1.SanitizedHTML, { html: (0, util_1.getStr)(value) }))),
                         width: (0, util_1.measureGridWidth)(rows.map(r => `${r[val]}`)),
                     })),
-                ], sortModel: [
-                /* we control the sort as a controlled component using onSortModelChange */
-                ], onSortModelChange: args => {
+                ], sortModel: [], onSortModelChange: args => {
                     const sort = args[0];
-                    // this idx%2 flip flops the sorting order, we could inspect args
-                    // for sort direction asc or desc but this is just a simplified
-                    // thing since we are controlling sort instead of the default data
-                    // grid sort anyways
                     const idx = (currSort.idx + 1) % 2;
                     const field = sort.field || currSort.field;
                     setCurrSort({ idx, field });

package/dist/MultiLinearWiggleDisplay/components/Tooltip.d.ts

@@ -1,7 +1,7 @@
 import React from 'react';
-import { Feature } from '@jbrowse/core/util';
-import { Source } from '../../util';
-import { TooltipContentsComponent } from '../../Tooltip';
+import type { TooltipContentsComponent } from '../../Tooltip';
+import type { Source } from '../../util';
+import type { Feature } from '@jbrowse/core/util';
 type Coord = [number, number];
 declare const WiggleTooltip: (props: {
     model: {

package/dist/MultiLinearWiggleDisplay/components/Tooltip.js

@@ -6,9 +6,8 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.Tooltip = void 0;
 const react_1 = __importDefault(require("react"));
 const mobx_react_1 = require("mobx-react");
-// locals
-const util_1 = require("../../util");
 const Tooltip_1 = __importDefault(require("../../Tooltip"));
+const util_1 = require("../../util");
 const en = (n) => n.toLocaleString('en-US');
 const TooltipContents = react_1.default.forwardRef(function TooltipContents2({ model, feature }, ref) {
     const start = feature.get('start');

package/dist/MultiLinearWiggleDisplay/components/WiggleDisplayComponent.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { WiggleDisplayModel } from '../model';
+import type { WiggleDisplayModel } from '../model';
 declare const MultiLinearWiggleDisplayComponent: (props: {
     model: WiggleDisplayModel;
 }) => React.JSX.Element;

package/dist/MultiLinearWiggleDisplay/components/YScaleBars.d.ts

@@ -1,5 +1,5 @@
 import React from 'react';
-import { WiggleDisplayModel } from '../model';
+import type { WiggleDisplayModel } from '../model';
 export declare const YScaleBars: (props: {
     model: WiggleDisplayModel;
     orientation?: string;

package/dist/MultiLinearWiggleDisplay/components/YScaleBars.js

@@ -7,10 +7,10 @@ exports.YScaleBars = void 0;
 const react_1 = __importDefault(require("react"));
 const util_1 = require("@jbrowse/core/util");
 const mobx_react_1 = require("mobx-react");
-const YScaleBar_1 = __importDefault(require("../../shared/YScaleBar"));
 const ColorLegend_1 = __importDefault(require("./ColorLegend"));
 const ScoreLegend_1 = __importDefault(require("./ScoreLegend"));
 const util_2 = require("./util");
+const YScaleBar_1 = __importDefault(require("../../shared/YScaleBar"));
 const Wrapper = (0, mobx_react_1.observer)(function ({ children, model, exportSVG, }) {
     const { height } = model;
     return exportSVG ? (children) : (react_1.default.createElement("svg", { style: {

package/dist/MultiLinearWiggleDisplay/components/util.d.ts

@@ -1,4 +1,4 @@
-import { WiggleDisplayModel } from '../model';
+import type { WiggleDisplayModel } from '../model';
 export declare function moveUp(arr: {
     name: string;
 }[], sel: string[], by?: number): {

package/dist/MultiLinearWiggleDisplay/components/util.js

@@ -3,8 +3,8 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.moveUp = moveUp;
 exports.moveDown = moveDown;
 exports.getOffset = getOffset;
-const util_1 = require("@jbrowse/core/util");
 const configuration_1 = require("@jbrowse/core/configuration");
+const util_1 = require("@jbrowse/core/util");
 function moveUp(arr, sel, by = 1) {
     const idxs = sel
         .map(l => arr.findIndex(v => v.name === l))

package/dist/MultiLinearWiggleDisplay/configSchema.d.ts

@@ -1,16 +1,10 @@
-import PluginManager from '@jbrowse/core/PluginManager';
+import type PluginManager from '@jbrowse/core/PluginManager';
 export default function WiggleConfigFactory(pluginManager: PluginManager): import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
-    /**
-     * #slot
-     */
     defaultRendering: {
         type: string;
         model: import("mobx-state-tree").ISimpleType<string>;
         defaultValue: string;
     };
-    /**
-     * #slot
-     */
     renderers: import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaType<{
         MultiXYPlotRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
         MultiDensityRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
@@ -18,9 +12,6 @@ export default function WiggleConfigFactory(pluginManager: PluginManager): impor
         MultiLineRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
         MultiRowLineRenderer: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
     }, import("@jbrowse/core/configuration/configurationSchema").ConfigurationSchemaOptions<undefined, undefined>>;
-    /**
-     * #slot
-     */
     height: {
         type: string;
         defaultValue: number;

package/dist/MultiLinearWiggleDisplay/configSchema.js

@@ -6,14 +6,8 @@ Object.defineProperty(exports, "__esModule", { value: true });
 exports.default = WiggleConfigFactory;
 const configuration_1 = require("@jbrowse/core/configuration");
 const mobx_state_tree_1 = require("mobx-state-tree");
-// locals
 const SharedWiggleConfigSchema_1 = __importDefault(require("../shared/SharedWiggleConfigSchema"));
-/**
- * #config MultiLinearWiggleDisplay
- * extends
- * - [SharedWiggleDisplay](../sharedwiggledisplay)
- */
-function x() { } // eslint-disable-line @typescript-eslint/no-unused-vars
+function x() { }
 function WiggleConfigFactory(pluginManager) {
     const MultiXYPlotRendererConfigSchema = pluginManager.getRendererType('MultiXYPlotRenderer').configSchema;
     const MultiDensityRendererConfigSchema = pluginManager.getRendererType('MultiDensityRenderer').configSchema;
@@ -21,9 +15,6 @@ function WiggleConfigFactory(pluginManager) {
     const MultiLineRendererConfigSchema = pluginManager.getRendererType('MultiLineRenderer').configSchema;
     const MultiRowLineRendererConfigSchema = pluginManager.getRendererType('MultiRowLineRenderer').configSchema;
     return (0, configuration_1.ConfigurationSchema)('MultiLinearWiggleDisplay', {
-        /**
-         * #slot
-         */
         defaultRendering: {
             type: 'stringEnum',
             model: mobx_state_tree_1.types.enumeration('Rendering', [
@@ -35,9 +26,6 @@ function WiggleConfigFactory(pluginManager) {
             ]),
             defaultValue: 'multirowxy',
         },
-        /**
-         * #slot
-         */
         renderers: (0, configuration_1.ConfigurationSchema)('RenderersConfiguration', {
             MultiXYPlotRenderer: MultiXYPlotRendererConfigSchema,
             MultiDensityRenderer: MultiDensityRendererConfigSchema,
@@ -45,17 +33,11 @@ function WiggleConfigFactory(pluginManager) {
             MultiLineRenderer: MultiLineRendererConfigSchema,
             MultiRowLineRenderer: MultiRowLineRendererConfigSchema,
         }),
-        /**
-         * #slot
-         */
         height: {
             type: 'number',
             defaultValue: 200,
         },
     }, {
-        /**
-         * #baseConfiguration
-         */
         baseConfiguration: (0, SharedWiggleConfigSchema_1.default)(),
         explicitlyTyped: true,
     });