@jbrowse/plugin-variants 1.7.9 → 2.0.0

package/dist/index.test.js

@@ -1,37 +0,0 @@
-"use strict";
-
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
-
-var _PluginManager = _interopRequireDefault(require("@jbrowse/core/PluginManager"));
-
-var _pluginAlignments = _interopRequireDefault(require("@jbrowse/plugin-alignments"));
-
-var _pluginSvg = _interopRequireDefault(require("@jbrowse/plugin-svg"));
-
-var _mobxStateTree = require("mobx-state-tree");
-
-var _ = _interopRequireDefault(require("."));
-
-test('plugin in a stock JBrowse', function () {
-  console.warn = jest.fn();
-  var pluginManager = new _PluginManager.default([new _.default(), new _pluginAlignments.default(), new _pluginSvg.default()]);
-  pluginManager.createPluggableElements();
-  pluginManager.configure();
-  expect(function () {
-    return pluginManager.addPlugin(new _.default());
-  }).toThrow(/JBrowse already configured, cannot add plugins/);
-  var VcfTabixAdapter = pluginManager.getAdapterType('VcfTabixAdapter');
-  var config = VcfTabixAdapter.configSchema.create({
-    type: 'VcfTabixAdapter'
-  });
-  expect((0, _mobxStateTree.getSnapshot)(config)).toMatchSnapshot();
-  var VariantTrack = pluginManager.getTrackType('VariantTrack');
-  var config2 = VariantTrack.configSchema.create({
-    type: 'VariantTrack',
-    trackId: 'trackId0',
-    adapter: {
-      type: 'VcfTabixAdapter'
-    }
-  });
-  expect((0, _mobxStateTree.getSnapshot)(config2)).toMatchSnapshot();
-});

package/src/VariantFeatureWidget/index.js

@@ -1,26 +0,0 @@
-import { ConfigurationSchema } from '@jbrowse/core/configuration'
-import { ElementId } from '@jbrowse/core/util/types/mst'
-import { types } from 'mobx-state-tree'
-
-export const configSchema = ConfigurationSchema('VariantFeatureWidget', {})
-
-export function stateModelFactory(pluginManager) {
-  return types
-    .model('VariantFeatureWidget', {
-      id: ElementId,
-      type: types.literal('VariantFeatureWidget'),
-      view: types.safeReference(
-        pluginManager.pluggableMstType('view', 'stateModel'),
-      ),
-      featureData: types.frozen(),
-      descriptions: types.frozen(),
-    })
-    .actions(self => ({
-      setFeatureData(data) {
-        self.featureData = data
-      },
-      clearFeatureData() {
-        self.featureData = undefined
-      },
-    }))
-}