@jbrowse/plugin-sequence 1.7.0 → 1.7.4

package/dist/TwoBitAdapter/TwoBitAdapter.js

@@ -5,7 +5,7 @@ var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefau
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _regenerator = _interopRequireDefault(require("@babel/runtime/regenerator"));
 
@@ -39,22 +39,22 @@ var _twobit = require("@gmod/twobit");
 
 var _configuration = require("@jbrowse/core/configuration");
 
-function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
+function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
 
 function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
 
 var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
-  (0, _inherits2["default"])(TwoBitAdapter, _BaseSequenceAdapter);
+  (0, _inherits2.default)(TwoBitAdapter, _BaseSequenceAdapter);
 
   var _super = _createSuper(TwoBitAdapter);
 
   function TwoBitAdapter(config, getSubAdapter, pluginManager) {
     var _this;
 
-    (0, _classCallCheck2["default"])(this, TwoBitAdapter);
+    (0, _classCallCheck2.default)(this, TwoBitAdapter);
     _this = _super.call(this, config, getSubAdapter, pluginManager);
-    (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "twobit", void 0);
-    (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "chromSizesData", void 0);
+    (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "twobit", void 0);
+    (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "chromSizesData", void 0);
     _this.chromSizesData = _this.initChromSizes();
     _this.twobit = new _twobit.TwoBitFile({
       filehandle: (0, _io.openLocation)((0, _configuration.readConfObject)(config, 'twoBitLocation'), _this.pluginManager)
@@ -62,14 +62,14 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
     return _this;
   }
 
-  (0, _createClass2["default"])(TwoBitAdapter, [{
+  (0, _createClass2.default)(TwoBitAdapter, [{
     key: "initChromSizes",
     value: // the chromSizesData can be used to speed up loading since TwoBit has to do
     // many range requests at startup to perform the getRegions request
     function () {
-      var _initChromSizes = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+      var _initChromSizes = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
         var conf, file, data;
-        return _regenerator["default"].wrap(function _callee$(_context) {
+        return _regenerator.default.wrap(function _callee$(_context) {
           while (1) {
             switch (_context.prev = _context.next) {
               case 0:
@@ -92,7 +92,7 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
                   return !!line.trim();
                 }).map(function (line) {
                   var _line$split = line.split('\t'),
-                      _line$split2 = (0, _slicedToArray2["default"])(_line$split, 2),
+                      _line$split2 = (0, _slicedToArray2.default)(_line$split, 2),
                       name = _line$split2[0],
                       length = _line$split2[1];
 
@@ -119,9 +119,9 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
   }, {
     key: "getRefNames",
     value: function () {
-      var _getRefNames = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
+      var _getRefNames = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
         var chromSizesData;
-        return _regenerator["default"].wrap(function _callee2$(_context2) {
+        return _regenerator.default.wrap(function _callee2$(_context2) {
           while (1) {
             switch (_context2.prev = _context2.next) {
               case 0:
@@ -158,9 +158,9 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
   }, {
     key: "getRegions",
     value: function () {
-      var _getRegions = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee3() {
+      var _getRegions = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee3() {
         var chromSizesData, refSizes;
-        return _regenerator["default"].wrap(function _callee3$(_context3) {
+        return _regenerator.default.wrap(function _callee3$(_context3) {
           while (1) {
             switch (_context3.prev = _context3.next) {
               case 0:
@@ -226,9 +226,9 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
           start = _ref.start,
           end = _ref.end;
       return (0, _rxjs.ObservableCreate)( /*#__PURE__*/function () {
-        var _ref2 = (0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee4(observer) {
+        var _ref2 = (0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee4(observer) {
           var size, regionEnd, seq;
-          return _regenerator["default"].wrap(function _callee4$(_context4) {
+          return _regenerator.default.wrap(function _callee4$(_context4) {
             while (1) {
               switch (_context4.prev = _context4.next) {
                 case 0:
@@ -245,7 +245,7 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
                   seq = _context4.sent;
 
                   if (seq) {
-                    observer.next(new _simpleFeature["default"]({
+                    observer.next(new _simpleFeature.default({
                       id: "".concat(refName, " ").concat(start, "-").concat(regionEnd),
                       data: {
                         refName: refName,
@@ -286,4 +286,4 @@ var TwoBitAdapter = /*#__PURE__*/function (_BaseSequenceAdapter) {
   return TwoBitAdapter;
 }(_BaseAdapter.BaseSequenceAdapter);
 
-exports["default"] = TwoBitAdapter;
+exports.default = TwoBitAdapter;

package/dist/TwoBitAdapter/TwoBitAdapter.test.js

@@ -12,13 +12,13 @@ var _TwoBitAdapter = _interopRequireDefault(require("./TwoBitAdapter"));
 
 var _configSchema = _interopRequireDefault(require("./configSchema"));
 
-test('adapter can fetch features from volvox.2bit', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee() {
+test('adapter can fetch features from volvox.2bit', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee() {
   var adapter, features, featuresArray, features2, featuresArray2, features3, featuresArray3;
-  return _regenerator["default"].wrap(function _callee$(_context) {
+  return _regenerator.default.wrap(function _callee$(_context) {
     while (1) {
       switch (_context.prev = _context.next) {
         case 0:
-          adapter = new _TwoBitAdapter["default"](_configSchema["default"].create({
+          adapter = new _TwoBitAdapter.default(_configSchema.default.create({
             twoBitLocation: {
               localPath: require.resolve('../../test_data/volvox.2bit'),
               locationType: 'LocalPathLocation'
@@ -65,13 +65,13 @@ test('adapter can fetch features from volvox.2bit', /*#__PURE__*/(0, _asyncToGen
     }
   }, _callee);
 })));
-test('adapter can fetch regions from with chrom.sizes', /*#__PURE__*/(0, _asyncToGenerator2["default"])( /*#__PURE__*/_regenerator["default"].mark(function _callee2() {
+test('adapter can fetch regions from with chrom.sizes', /*#__PURE__*/(0, _asyncToGenerator2.default)( /*#__PURE__*/_regenerator.default.mark(function _callee2() {
   var adapter;
-  return _regenerator["default"].wrap(function _callee2$(_context2) {
+  return _regenerator.default.wrap(function _callee2$(_context2) {
     while (1) {
       switch (_context2.prev = _context2.next) {
         case 0:
-          adapter = new _TwoBitAdapter["default"](_configSchema["default"].create({
+          adapter = new _TwoBitAdapter.default(_configSchema.default.create({
             chromSizesLocation: {
               localPath: require.resolve('../../test_data/volvox.chrom.sizes'),
               locationType: 'LocalPathLocation'

package/dist/TwoBitAdapter/configSchema.d.ts

@@ -1,2 +1,2 @@
-declare const _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
-export default _default;
+declare const _default: import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+export default _default;

package/dist/TwoBitAdapter/configSchema.js

@@ -3,7 +3,7 @@
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _configuration = require("@jbrowse/core/configuration");
 
@@ -27,4 +27,4 @@ var _default = (0, _configuration.ConfigurationSchema)('TwoBitAdapter', {
   explicitlyTyped: true
 });
 
-exports["default"] = _default;
+exports.default = _default;

package/dist/TwoBitAdapter/index.d.ts

@@ -1 +1 @@
-export { default as configSchema } from './configSchema';
+export { default as configSchema } from './configSchema';

package/dist/TwoBitAdapter/index.js

@@ -8,7 +8,7 @@ Object.defineProperty(exports, "__esModule", {
 Object.defineProperty(exports, "configSchema", {
   enumerable: true,
   get: function get() {
-    return _configSchema["default"];
+    return _configSchema.default;
   }
 });
 

package/dist/index.d.ts

@@ -1,6 +1,6 @@
-import Plugin from '@jbrowse/core/Plugin';
-import PluginManager from '@jbrowse/core/PluginManager';
-export default class SequencePlugin extends Plugin {
-    name: string;
-    install(pluginManager: PluginManager): void;
-}
+import Plugin from '@jbrowse/core/Plugin';
+import PluginManager from '@jbrowse/core/PluginManager';
+export default class SequencePlugin extends Plugin {
+    name: string;
+    install(pluginManager: PluginManager): void;
+}

package/dist/index.js

@@ -7,7 +7,7 @@ var _typeof = require("@babel/runtime/helpers/typeof");
 Object.defineProperty(exports, "__esModule", {
   value: true
 });
-exports["default"] = void 0;
+exports.default = void 0;
 
 var _classCallCheck2 = _interopRequireDefault(require("@babel/runtime/helpers/classCallCheck"));
 
@@ -55,37 +55,37 @@ var _referenceSeqTrackConfig = require("./referenceSeqTrackConfig");
 
 function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
 
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { "default": obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj["default"] = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
+function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
 
 function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
 
-function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2["default"])(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
+function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
 
-function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2["default"])(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2["default"])(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2["default"])(this, result); }; }
+function _createSuper(Derived) { var hasNativeReflectConstruct = _isNativeReflectConstruct(); return function _createSuperInternal() { var Super = (0, _getPrototypeOf2.default)(Derived), result; if (hasNativeReflectConstruct) { var NewTarget = (0, _getPrototypeOf2.default)(this).constructor; result = Reflect.construct(Super, arguments, NewTarget); } else { result = Super.apply(this, arguments); } return (0, _possibleConstructorReturn2.default)(this, result); }; }
 
 function _isNativeReflectConstruct() { if (typeof Reflect === "undefined" || !Reflect.construct) return false; if (Reflect.construct.sham) return false; if (typeof Proxy === "function") return true; try { Boolean.prototype.valueOf.call(Reflect.construct(Boolean, [], function () {})); return true; } catch (e) { return false; } }
 
 /* adjust in both directions */
 var DivSequenceRenderer = /*#__PURE__*/function (_FeatureRendererType) {
-  (0, _inherits2["default"])(DivSequenceRenderer, _FeatureRendererType);
+  (0, _inherits2.default)(DivSequenceRenderer, _FeatureRendererType);
 
   var _super = _createSuper(DivSequenceRenderer);
 
   function DivSequenceRenderer() {
     var _this;
 
-    (0, _classCallCheck2["default"])(this, DivSequenceRenderer);
+    (0, _classCallCheck2.default)(this, DivSequenceRenderer);
 
     for (var _len = arguments.length, args = new Array(_len), _key = 0; _key < _len; _key++) {
       args[_key] = arguments[_key];
     }
 
     _this = _super.call.apply(_super, [this].concat(args));
-    (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this), "supportsSVG", true);
+    (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this), "supportsSVG", true);
     return _this;
   }
 
-  (0, _createClass2["default"])(DivSequenceRenderer, [{
+  (0, _createClass2.default)(DivSequenceRenderer, [{
     key: "getExpandedRegion",
     value: function getExpandedRegion(region) {
       return _objectSpread(_objectSpread({}, region), {}, {
@@ -95,32 +95,32 @@ var DivSequenceRenderer = /*#__PURE__*/function (_FeatureRendererType) {
     }
   }]);
   return DivSequenceRenderer;
-}(_FeatureRendererType2["default"]);
+}(_FeatureRendererType2.default);
 
 var SequencePlugin = /*#__PURE__*/function (_Plugin) {
-  (0, _inherits2["default"])(SequencePlugin, _Plugin);
+  (0, _inherits2.default)(SequencePlugin, _Plugin);
 
   var _super2 = _createSuper(SequencePlugin);
 
   function SequencePlugin() {
     var _this2;
 
-    (0, _classCallCheck2["default"])(this, SequencePlugin);
+    (0, _classCallCheck2.default)(this, SequencePlugin);
 
     for (var _len2 = arguments.length, args = new Array(_len2), _key2 = 0; _key2 < _len2; _key2++) {
       args[_key2] = arguments[_key2];
     }
 
     _this2 = _super2.call.apply(_super2, [this].concat(args));
-    (0, _defineProperty2["default"])((0, _assertThisInitialized2["default"])(_this2), "name", 'SequencePlugin');
+    (0, _defineProperty2.default)((0, _assertThisInitialized2.default)(_this2), "name", 'SequencePlugin');
     return _this2;
   }
 
-  (0, _createClass2["default"])(SequencePlugin, [{
+  (0, _createClass2.default)(SequencePlugin, [{
     key: "install",
     value: function install(pluginManager) {
       pluginManager.addAdapterType(function () {
-        return new _AdapterType["default"]({
+        return new _AdapterType.default({
           name: 'TwoBitAdapter',
           configSchema: _TwoBitAdapter.configSchema,
           adapterMetadata: {
@@ -133,7 +133,7 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
             return Promise.resolve().then(function () {
               return _interopRequireWildcard(require('./TwoBitAdapter/TwoBitAdapter'));
             }).then(function (r) {
-              return r["default"];
+              return r.default;
             });
           }
         });
@@ -167,7 +167,7 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
         };
       });
       pluginManager.addAdapterType(function () {
-        return new _AdapterType["default"]({
+        return new _AdapterType.default({
           name: 'ChromSizesAdapter',
           configSchema: _ChromSizesAdapter.configSchema,
           adapterMetadata: {
@@ -180,13 +180,13 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
             return Promise.resolve().then(function () {
               return _interopRequireWildcard(require('./ChromSizesAdapter/ChromSizesAdapter'));
             }).then(function (r) {
-              return r["default"];
+              return r.default;
             });
           }
         });
       });
       pluginManager.addAdapterType(function () {
-        return new _AdapterType["default"]({
+        return new _AdapterType.default({
           name: 'IndexedFastaAdapter',
           configSchema: _IndexedFastaAdapter.configSchema,
           adapterMetadata: {
@@ -199,7 +199,7 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
             return Promise.resolve().then(function () {
               return _interopRequireWildcard(require('./IndexedFastaAdapter/IndexedFastaAdapter'));
             }).then(function (r) {
-              return r["default"];
+              return r.default;
             });
           }
         });
@@ -234,7 +234,7 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
         };
       });
       pluginManager.addAdapterType(function () {
-        return new _AdapterType["default"]({
+        return new _AdapterType.default({
           name: 'BgzipFastaAdapter',
           configSchema: _BgzipFastaAdapter.configSchema,
           adapterMetadata: {
@@ -247,7 +247,7 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
             return Promise.resolve().then(function () {
               return _interopRequireWildcard(require('./BgzipFastaAdapter/BgzipFastaAdapter'));
             }).then(function (r) {
-              return r["default"];
+              return r.default;
             });
           }
         });
@@ -282,7 +282,7 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
         };
       });
       pluginManager.addAdapterType(function () {
-        return new _AdapterType["default"](_objectSpread({
+        return new _AdapterType.default(_objectSpread({
           name: 'GCContentAdapter',
           adapterMetadata: {
             category: null,
@@ -290,11 +290,11 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
             displayName: null,
             description: null
           }
-        }, pluginManager.load(_GCContentAdapter["default"])));
+        }, pluginManager.load(_GCContentAdapter.default)));
       });
       pluginManager.addTrackType(function () {
         var configSchema = (0, _referenceSeqTrackConfig.createReferenceSeqTrackConfig)(pluginManager);
-        return new _TrackType["default"]({
+        return new _TrackType.default({
           name: 'ReferenceSequenceTrack',
           configSchema: configSchema,
           stateModel: (0, _models.createBaseTrackModel)(pluginManager, 'ReferenceSequenceTrack', configSchema)
@@ -322,6 +322,6 @@ var SequencePlugin = /*#__PURE__*/function (_Plugin) {
     }
   }]);
   return SequencePlugin;
-}(_Plugin2["default"]);
+}(_Plugin2.default);
 
-exports["default"] = SequencePlugin;
+exports.default = SequencePlugin;

package/dist/index.test.js

@@ -10,11 +10,11 @@ var _ = _interopRequireDefault(require("."));
 
 test('plugin in a stock JBrowse', function () {
   console.warn = jest.fn();
-  var pluginManager = new _PluginManager["default"]([new _["default"]()]);
+  var pluginManager = new _PluginManager.default([new _.default()]);
   pluginManager.createPluggableElements();
   pluginManager.configure();
   expect(function () {
-    return pluginManager.addPlugin(new _["default"]());
+    return pluginManager.addPlugin(new _.default());
   }).toThrow(/JBrowse already configured, cannot add plugins/);
   var TwoBitAdapter = pluginManager.getAdapterType('TwoBitAdapter');
   var config = TwoBitAdapter.configSchema.create({

package/dist/referenceSeqTrackConfig.d.ts

@@ -1,2 +1,2 @@
-import PluginManager from '@jbrowse/core/PluginManager';
-export declare function createReferenceSeqTrackConfig(pluginManager: PluginManager): import("@jbrowse/core/configuration").AnyConfigurationSchemaType;
+import PluginManager from '@jbrowse/core/PluginManager';
+export declare function createReferenceSeqTrackConfig(pluginManager: PluginManager): import("@jbrowse/core/configuration").AnyConfigurationSchemaType;

package/dist/referenceSeqTrackConfig.js

@@ -15,7 +15,7 @@ var _configuration = require("@jbrowse/core/configuration");
 
 function ownKeys(object, enumerableOnly) { var keys = Object.keys(object); if (Object.getOwnPropertySymbols) { var symbols = Object.getOwnPropertySymbols(object); enumerableOnly && (symbols = symbols.filter(function (sym) { return Object.getOwnPropertyDescriptor(object, sym).enumerable; })), keys.push.apply(keys, symbols); } return keys; }
 
-function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2["default"])(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
+function _objectSpread(target) { for (var i = 1; i < arguments.length; i++) { var source = null != arguments[i] ? arguments[i] : {}; i % 2 ? ownKeys(Object(source), !0).forEach(function (key) { (0, _defineProperty2.default)(target, key, source[key]); }) : Object.getOwnPropertyDescriptors ? Object.defineProperties(target, Object.getOwnPropertyDescriptors(source)) : ownKeys(Object(source)).forEach(function (key) { Object.defineProperty(target, key, Object.getOwnPropertyDescriptor(source, key)); }); } return target; }
 
 /*
 Note: this is primarily a copy of createBaseTrackConfig, except with a subset

package/package.json

@@ -1,6 +1,6 @@
 {
   "name": "@jbrowse/plugin-sequence",
-  "version": "1.7.0",
+  "version": "1.7.4",
   "description": "JBrowse 2 sequence adapters, tracks, etc.",
   "keywords": [
     "jbrowse",
@@ -29,13 +29,14 @@
     "prepack": "yarn build; yarn useDist",
     "postpack": "yarn useSrc",
     "useDist": "node ../../scripts/useDist.js",
-    "useSrc": "node ../../scripts/useSrc.js"
+    "useSrc": "node ../../scripts/useSrc.js",
+    "postbuild": "tsc --build tsconfig.build.json"
   },
   "dependencies": {
+    "@babel/runtime": "^7.17.9",
     "@gmod/indexedfasta": "^2.0.2",
     "@gmod/twobit": "^1.1.12",
     "abortable-promise-cache": "^1.5.0",
-    "clsx": "^1.1.0",
     "generic-filehandle": "^2.2.2"
   },
   "peerDependencies": {
@@ -52,5 +53,5 @@
   "publishConfig": {
     "access": "public"
   },
-  "gitHead": "cc13844074d11881d211342a6a7eea113561b70b"
+  "gitHead": "0a3e0c58055bbab8e3ab0270c139291b96eff403"
 }

package/dist/DivSequenceRenderer/components/DivSequenceRendering.test.d.ts

@@ -1 +0,0 @@
-export {};

package/dist/index.test.d.ts

@@ -1 +0,0 @@
-export {};