@jbrowse/plugin-linear-genome-view 2.12.0 → 2.12.2

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Files changed (57) hide show
  1. package/dist/BaseLinearDisplay/components/Block.js +3 -3
  2. package/dist/BaseLinearDisplay/components/BlockMsg.js +1 -1
  3. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +22 -24
  4. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +2 -2
  5. package/dist/BaseLinearDisplay/models/FeatureDensityMixin.js +1 -1
  6. package/dist/BaseLinearDisplay/models/TrackHeightMixin.js +1 -1
  7. package/dist/BaseLinearDisplay/models/autorunFeatureDensityStats.js +1 -1
  8. package/dist/BaseLinearDisplay/models/renderSvg.js +1 -2
  9. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +4 -4
  10. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +1 -2
  11. package/dist/BaseLinearDisplay/models/util.js +3 -4
  12. package/dist/BasicTrack/index.js +1 -1
  13. package/dist/FeatureTrack/index.js +1 -1
  14. package/dist/LaunchLinearGenomeView/index.js +1 -1
  15. package/dist/LinearBareDisplay/configSchema.js +1 -2
  16. package/dist/LinearBareDisplay/index.js +1 -1
  17. package/dist/LinearBareDisplay/model.d.ts +26 -33
  18. package/dist/LinearBareDisplay/model.js +1 -2
  19. package/dist/LinearBasicDisplay/index.js +1 -1
  20. package/dist/LinearBasicDisplay/model.d.ts +52 -53
  21. package/dist/LinearGenomeView/components/ExportSvgDialog.js +1 -1
  22. package/dist/LinearGenomeView/components/RefNameAutocomplete/AutocompleteTextField.js +1 -1
  23. package/dist/LinearGenomeView/components/RefNameAutocomplete/EndAdornment.js +1 -1
  24. package/dist/LinearGenomeView/components/RefNameAutocomplete/HelpDialog.js +1 -1
  25. package/dist/LinearGenomeView/components/RefNameAutocomplete/util.js +3 -4
  26. package/dist/LinearGenomeView/components/RubberbandSpan.js +1 -1
  27. package/dist/LinearGenomeView/components/SearchResultsDialog.js +1 -1
  28. package/dist/LinearGenomeView/components/SearchResultsTable.js +1 -1
  29. package/dist/LinearGenomeView/components/hooks.d.ts +2 -2
  30. package/dist/LinearGenomeView/components/hooks.js +3 -4
  31. package/dist/LinearGenomeView/components/util.js +4 -5
  32. package/dist/LinearGenomeView/index.js +1 -1
  33. package/dist/LinearGenomeView/model.d.ts +10 -10
  34. package/dist/LinearGenomeView/model.js +2 -2
  35. package/dist/LinearGenomeView/svgcomponents/SVGBackground.js +1 -1
  36. package/dist/LinearGenomeView/svgcomponents/SVGHeader.js +1 -1
  37. package/dist/LinearGenomeView/svgcomponents/SVGLinearGenomeView.js +2 -2
  38. package/dist/LinearGenomeView/svgcomponents/SVGRegionSeparators.js +1 -1
  39. package/dist/LinearGenomeView/svgcomponents/SVGRuler.js +1 -1
  40. package/dist/LinearGenomeView/svgcomponents/SVGScalebar.js +1 -1
  41. package/dist/LinearGenomeView/svgcomponents/SVGTrackLabel.js +1 -1
  42. package/dist/LinearGenomeView/svgcomponents/SVGTracks.js +1 -1
  43. package/dist/LinearGenomeView/svgcomponents/util.js +1 -2
  44. package/dist/LinearGenomeView/util.d.ts +3 -3
  45. package/dist/LinearGenomeView/util.js +4 -5
  46. package/dist/index.d.ts +74 -2237
  47. package/dist/searchUtils.js +5 -6
  48. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +22 -24
  49. package/esm/BaseLinearDisplay/models/FeatureDensityMixin.d.ts +2 -2
  50. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +4 -4
  51. package/esm/LinearBareDisplay/model.d.ts +26 -33
  52. package/esm/LinearBasicDisplay/model.d.ts +52 -53
  53. package/esm/LinearGenomeView/components/hooks.d.ts +2 -2
  54. package/esm/LinearGenomeView/model.d.ts +10 -10
  55. package/esm/LinearGenomeView/util.d.ts +3 -3
  56. package/esm/index.d.ts +74 -2237
  57. package/package.json +2 -2
@@ -85,15 +85,15 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  } & {
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  volatileWidth: number | undefined;
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  minimumBlockWidth: number;
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- draggingTrackId: string | undefined;
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+ draggingTrackId: undefined | string;
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  volatileError: unknown;
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  afterDisplayedRegionsSetCallbacks: Function[];
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  scaleFactor: number;
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  trackRefs: Record<string, HTMLDivElement>;
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  coarseDynamicBlocks: BaseBlock[];
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  coarseTotalBp: number;
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- leftOffset: BpOffset | undefined;
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- rightOffset: BpOffset | undefined;
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+ leftOffset: undefined | BpOffset;
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+ rightOffset: undefined | BpOffset;
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  } & {
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  /**
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  * #getter
@@ -327,7 +327,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  /**
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  * #action
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  */
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- setTrackLabels(setting: 'overlapping' | 'offset' | 'hidden'): void;
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+ setTrackLabels(setting: "overlapping" | "offset" | "hidden"): void;
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  /**
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  * #action
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  */
@@ -356,15 +356,15 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  start: number;
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  end: number;
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  type: string;
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- regionNumber?: number | undefined;
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- reversed?: boolean | undefined;
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+ regionNumber?: number;
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+ reversed?: boolean;
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  refName: string;
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  assemblyName: string;
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  key: string;
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  offsetPx: number;
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  widthPx: number;
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- variant?: string | undefined;
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- isLeftEndOfDisplayedRegion?: boolean | undefined;
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+ variant?: string;
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+ isLeftEndOfDisplayedRegion?: boolean;
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  }[];
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  /**
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  * #action
@@ -576,7 +576,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  offset: number;
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  start: number;
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  end: number;
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- reversed?: boolean | undefined;
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+ reversed?: boolean;
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  };
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  /**
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  * #getter
@@ -590,7 +590,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
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  offset: number;
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  start: number;
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  end: number;
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- reversed?: boolean | undefined;
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+ reversed?: boolean;
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  } | undefined;
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  } & {
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  afterCreate(): void;
@@ -23,9 +23,9 @@ export declare function makeTicks(start: number, end: number, bpPerPx: number, e
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  export declare function generateLocations(regions: ParsedLocString[] | undefined, assemblyManager: AssemblyManager, assemblyName?: string): Promise<{
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  assemblyName: string;
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  parentRegion: import("@jbrowse/core/assemblyManager/assembly").BasicRegion;
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- end?: number | undefined;
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- start?: number | undefined;
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- reversed?: boolean | undefined;
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+ end?: number;
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+ start?: number;
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+ reversed?: boolean;
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  refName: string;
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  }[]>;
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  /**