@jbrowse/plugin-linear-genome-view 2.1.0 → 2.1.3
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +27 -54
- package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -1
- package/dist/BaseLinearDisplay/components/Block.js +17 -28
- package/dist/BaseLinearDisplay/components/Block.js.map +1 -1
- package/dist/BaseLinearDisplay/components/LinearBlocks.js +19 -21
- package/dist/BaseLinearDisplay/components/LinearBlocks.js.map +1 -1
- package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +27 -48
- package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +1 -1
- package/dist/BaseLinearDisplay/components/Tooltip.js +29 -58
- package/dist/BaseLinearDisplay/components/Tooltip.js.map +1 -1
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +242 -363
- package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -1
- package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js +1 -1
- package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +1 -1
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +77 -129
- package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -1
- package/dist/LinearBareDisplay/configSchema.js +2 -2
- package/dist/LinearBareDisplay/configSchema.js.map +1 -1
- package/dist/LinearBareDisplay/model.js +13 -19
- package/dist/LinearBareDisplay/model.js.map +1 -1
- package/dist/LinearBasicDisplay/components/SetMaxHeight.js +14 -31
- package/dist/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -1
- package/dist/LinearBasicDisplay/configSchema.js +3 -3
- package/dist/LinearBasicDisplay/configSchema.js.map +1 -1
- package/dist/LinearBasicDisplay/model.js +119 -147
- package/dist/LinearBasicDisplay/model.js.map +1 -1
- package/dist/LinearGenomeView/components/CenterLine.js +11 -12
- package/dist/LinearGenomeView/components/CenterLine.js.map +1 -1
- package/dist/LinearGenomeView/components/ExportSvgDialog.js +30 -96
- package/dist/LinearGenomeView/components/ExportSvgDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/GetSequenceDialog.d.ts +9 -0
- package/dist/LinearGenomeView/components/GetSequenceDialog.js +172 -0
- package/dist/LinearGenomeView/components/GetSequenceDialog.js.map +1 -0
- package/dist/LinearGenomeView/components/Gridlines.js +18 -20
- package/dist/LinearGenomeView/components/Gridlines.js.map +1 -1
- package/dist/LinearGenomeView/components/Header.js +26 -31
- package/dist/LinearGenomeView/components/Header.js.map +1 -1
- package/dist/LinearGenomeView/components/HelpDialog.js +10 -11
- package/dist/LinearGenomeView/components/HelpDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/ImportForm.js +91 -158
- package/dist/LinearGenomeView/components/ImportForm.js.map +1 -1
- package/dist/LinearGenomeView/components/LinearGenomeView.js +20 -21
- package/dist/LinearGenomeView/components/LinearGenomeView.js.map +1 -1
- package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js +87 -157
- package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -1
- package/dist/LinearGenomeView/components/MiniControls.js +16 -32
- package/dist/LinearGenomeView/components/MiniControls.js.map +1 -1
- package/dist/LinearGenomeView/components/OverviewRubberBand.d.ts +0 -11
- package/dist/LinearGenomeView/components/OverviewRubberBand.js +44 -76
- package/dist/LinearGenomeView/components/OverviewRubberBand.js.map +1 -1
- package/dist/LinearGenomeView/components/OverviewScaleBar.d.ts +14 -8
- package/dist/LinearGenomeView/components/OverviewScaleBar.js +94 -117
- package/dist/LinearGenomeView/components/OverviewScaleBar.js.map +1 -1
- package/dist/LinearGenomeView/components/RefNameAutocomplete.js +107 -169
- package/dist/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -1
- package/dist/LinearGenomeView/components/RubberBand.js +51 -71
- package/dist/LinearGenomeView/components/RubberBand.js.map +1 -1
- package/dist/LinearGenomeView/components/Ruler.js +17 -18
- package/dist/LinearGenomeView/components/Ruler.js.map +1 -1
- package/dist/LinearGenomeView/components/ScaleBar.js +37 -58
- package/dist/LinearGenomeView/components/ScaleBar.js.map +1 -1
- package/dist/LinearGenomeView/components/SearchBox.js +73 -133
- package/dist/LinearGenomeView/components/SearchBox.js.map +1 -1
- package/dist/LinearGenomeView/components/SearchResultsDialog.js +38 -36
- package/dist/LinearGenomeView/components/SearchResultsDialog.js.map +1 -1
- package/dist/LinearGenomeView/components/{SequenceDialog.d.ts → SequenceSearchDialog.d.ts} +0 -0
- package/dist/LinearGenomeView/components/SequenceSearchDialog.js +104 -0
- package/dist/LinearGenomeView/components/SequenceSearchDialog.js.map +1 -0
- package/dist/LinearGenomeView/components/TrackContainer.js +28 -30
- package/dist/LinearGenomeView/components/TrackContainer.js.map +1 -1
- package/dist/LinearGenomeView/components/TrackLabel.js +37 -71
- package/dist/LinearGenomeView/components/TrackLabel.js.map +1 -1
- package/dist/LinearGenomeView/components/TracksContainer.js +32 -49
- package/dist/LinearGenomeView/components/TracksContainer.js.map +1 -1
- package/dist/LinearGenomeView/components/ZoomControls.js +15 -32
- package/dist/LinearGenomeView/components/ZoomControls.js.map +1 -1
- package/dist/LinearGenomeView/components/util.d.ts +1 -0
- package/dist/LinearGenomeView/components/util.js +28 -88
- package/dist/LinearGenomeView/components/util.js.map +1 -1
- package/dist/LinearGenomeView/index.d.ts +4 -4
- package/dist/LinearGenomeView/index.js +380 -430
- package/dist/LinearGenomeView/index.js.map +1 -1
- package/dist/LinearGenomeView/util.js +17 -36
- package/dist/LinearGenomeView/util.js.map +1 -1
- package/dist/index.js +75 -146
- package/dist/index.js.map +1 -1
- package/esm/LinearGenomeView/components/GetSequenceDialog.d.ts +9 -0
- package/esm/LinearGenomeView/components/{SequenceDialog.js → GetSequenceDialog.js} +4 -7
- package/esm/LinearGenomeView/components/GetSequenceDialog.js.map +1 -0
- package/esm/LinearGenomeView/components/ImportForm.js +39 -42
- package/esm/LinearGenomeView/components/ImportForm.js.map +1 -1
- package/esm/LinearGenomeView/components/LinearGenomeView.js +2 -2
- package/esm/LinearGenomeView/components/LinearGenomeView.js.map +1 -1
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js +2 -1
- package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -1
- package/esm/LinearGenomeView/components/OverviewRubberBand.d.ts +0 -11
- package/esm/LinearGenomeView/components/OverviewRubberBand.js +4 -12
- package/esm/LinearGenomeView/components/OverviewRubberBand.js.map +1 -1
- package/esm/LinearGenomeView/components/OverviewScaleBar.d.ts +14 -8
- package/esm/LinearGenomeView/components/OverviewScaleBar.js +0 -2
- package/esm/LinearGenomeView/components/OverviewScaleBar.js.map +1 -1
- package/esm/LinearGenomeView/components/RefNameAutocomplete.js +26 -6
- package/esm/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -1
- package/esm/LinearGenomeView/components/RubberBand.js +0 -1
- package/esm/LinearGenomeView/components/RubberBand.js.map +1 -1
- package/esm/LinearGenomeView/components/SearchBox.js +37 -33
- package/esm/LinearGenomeView/components/SearchBox.js.map +1 -1
- package/esm/LinearGenomeView/components/SearchResultsDialog.js +7 -4
- package/esm/LinearGenomeView/components/SearchResultsDialog.js.map +1 -1
- package/esm/LinearGenomeView/components/{SequenceDialog.d.ts → SequenceSearchDialog.d.ts} +0 -0
- package/esm/LinearGenomeView/components/SequenceSearchDialog.js +76 -0
- package/esm/LinearGenomeView/components/SequenceSearchDialog.js.map +1 -0
- package/esm/LinearGenomeView/components/TrackLabel.js +1 -1
- package/esm/LinearGenomeView/components/TrackLabel.js.map +1 -1
- package/esm/LinearGenomeView/components/util.d.ts +1 -0
- package/esm/LinearGenomeView/components/util.js +12 -0
- package/esm/LinearGenomeView/components/util.js.map +1 -1
- package/esm/LinearGenomeView/index.d.ts +4 -4
- package/esm/LinearGenomeView/index.js +26 -19
- package/esm/LinearGenomeView/index.js.map +1 -1
- package/package.json +2 -3
- package/src/LinearGenomeView/components/{SequenceDialog.tsx → GetSequenceDialog.tsx} +4 -17
- package/src/LinearGenomeView/components/ImportForm.tsx +40 -42
- package/src/LinearGenomeView/components/LinearGenomeView.tsx +3 -3
- package/src/LinearGenomeView/components/LinearGenomeViewSvg.tsx +4 -4
- package/src/LinearGenomeView/components/OverviewRubberBand.tsx +5 -15
- package/src/LinearGenomeView/components/OverviewScaleBar.tsx +0 -2
- package/src/LinearGenomeView/components/RefNameAutocomplete.tsx +27 -8
- package/src/LinearGenomeView/components/RubberBand.tsx +0 -1
- package/src/LinearGenomeView/components/SearchBox.tsx +39 -36
- package/src/LinearGenomeView/components/SearchResultsDialog.tsx +7 -4
- package/src/LinearGenomeView/components/SequenceSearchDialog.tsx +165 -0
- package/src/LinearGenomeView/components/TrackLabel.tsx +3 -1
- package/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.js.snap +16 -16
- package/src/LinearGenomeView/components/util.ts +12 -0
- package/src/LinearGenomeView/index.tsx +32 -25
- package/dist/LinearGenomeView/components/SequenceDialog.js +0 -242
- package/dist/LinearGenomeView/components/SequenceDialog.js.map +0 -1
- package/esm/LinearGenomeView/components/SequenceDialog.js.map +0 -1
|
@@ -57,7 +57,7 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
|
|
|
57
57
|
hideHeader: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
58
58
|
hideHeaderOverview: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
59
59
|
hideNoTracksActive: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
|
|
60
|
-
trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<
|
|
60
|
+
trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
61
61
|
trackLabels: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
|
|
62
62
|
showCenterLine: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
|
|
63
63
|
showCytobandsSetting: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
|
|
@@ -128,9 +128,9 @@ export declare function stateModelFactory(pluginManager: PluginManager): import(
|
|
|
128
128
|
toggleShowGridlines(): void;
|
|
129
129
|
scrollTo(offsetPx: number): number;
|
|
130
130
|
zoomTo(bpPerPx: number): number;
|
|
131
|
-
setOffsets(left
|
|
132
|
-
setSearchResults(results
|
|
133
|
-
|
|
131
|
+
setOffsets(left?: BpOffset, right?: BpOffset): void;
|
|
132
|
+
setSearchResults(results?: BaseResult[], query?: string): void;
|
|
133
|
+
setGetSequenceDialogOpen(open: boolean): void;
|
|
134
134
|
setNewView(bpPerPx: number, offsetPx: number): void;
|
|
135
135
|
horizontallyFlip(): void;
|
|
136
136
|
showTrack(trackId: string, initialSnapshot?: {}, displayInitialSnapshot?: {}): any;
|