@jbrowse/plugin-linear-genome-view 1.7.11 → 2.1.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (272) hide show
  1. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js +119 -139
  2. package/dist/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -0
  3. package/dist/BaseLinearDisplay/components/Block.js +53 -74
  4. package/dist/BaseLinearDisplay/components/Block.js.map +1 -0
  5. package/dist/BaseLinearDisplay/components/LinearBlocks.d.ts +11 -1
  6. package/dist/BaseLinearDisplay/components/LinearBlocks.js +64 -103
  7. package/dist/BaseLinearDisplay/components/LinearBlocks.js.map +1 -0
  8. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +146 -175
  9. package/dist/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +1 -0
  10. package/dist/BaseLinearDisplay/components/Tooltip.js +109 -116
  11. package/dist/BaseLinearDisplay/components/Tooltip.js.map +1 -0
  12. package/dist/BaseLinearDisplay/index.js +13 -40
  13. package/dist/BaseLinearDisplay/index.js.map +1 -0
  14. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +19 -14
  15. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js +605 -684
  16. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -0
  17. package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js +15 -22
  18. package/dist/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +1 -0
  19. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +7 -8
  20. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js +266 -312
  21. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -0
  22. package/dist/LinearBareDisplay/configSchema.js +11 -17
  23. package/dist/LinearBareDisplay/configSchema.js.map +1 -0
  24. package/dist/LinearBareDisplay/index.js +7 -20
  25. package/dist/LinearBareDisplay/index.js.map +1 -0
  26. package/dist/LinearBareDisplay/model.d.ts +15 -13
  27. package/dist/LinearBareDisplay/model.js +36 -42
  28. package/dist/LinearBareDisplay/model.js.map +1 -0
  29. package/dist/LinearBasicDisplay/components/SetMaxHeight.d.ts +1 -1
  30. package/dist/LinearBasicDisplay/components/SetMaxHeight.js +76 -85
  31. package/dist/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -0
  32. package/dist/LinearBasicDisplay/configSchema.js +15 -23
  33. package/dist/LinearBasicDisplay/configSchema.js.map +1 -0
  34. package/dist/LinearBasicDisplay/index.js +10 -22
  35. package/dist/LinearBasicDisplay/index.js.map +1 -0
  36. package/dist/LinearBasicDisplay/model.d.ts +20 -14
  37. package/dist/LinearBasicDisplay/model.js +180 -159
  38. package/dist/LinearBasicDisplay/model.js.map +1 -0
  39. package/dist/LinearGenomeView/components/CenterLine.d.ts +2 -8
  40. package/dist/LinearGenomeView/components/CenterLine.js +60 -74
  41. package/dist/LinearGenomeView/components/CenterLine.js.map +1 -0
  42. package/dist/LinearGenomeView/components/ExportSvgDialog.js +141 -141
  43. package/dist/LinearGenomeView/components/ExportSvgDialog.js.map +1 -0
  44. package/dist/LinearGenomeView/components/Gridlines.d.ts +8 -0
  45. package/dist/LinearGenomeView/components/Gridlines.js +78 -0
  46. package/dist/LinearGenomeView/components/Gridlines.js.map +1 -0
  47. package/dist/LinearGenomeView/components/Header.d.ts +1 -0
  48. package/dist/LinearGenomeView/components/Header.js +70 -125
  49. package/dist/LinearGenomeView/components/Header.js.map +1 -0
  50. package/dist/LinearGenomeView/components/HelpDialog.d.ts +0 -1
  51. package/dist/LinearGenomeView/components/HelpDialog.js +62 -44
  52. package/dist/LinearGenomeView/components/HelpDialog.js.map +1 -0
  53. package/dist/LinearGenomeView/components/ImportForm.d.ts +1 -0
  54. package/dist/LinearGenomeView/components/ImportForm.js +222 -289
  55. package/dist/LinearGenomeView/components/ImportForm.js.map +1 -0
  56. package/dist/LinearGenomeView/components/LinearGenomeView.js +60 -124
  57. package/dist/LinearGenomeView/components/LinearGenomeView.js.map +1 -0
  58. package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js +198 -337
  59. package/dist/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -0
  60. package/dist/LinearGenomeView/components/MiniControls.js +64 -78
  61. package/dist/LinearGenomeView/components/MiniControls.js.map +1 -0
  62. package/dist/LinearGenomeView/components/OverviewRubberBand.js +229 -293
  63. package/dist/LinearGenomeView/components/OverviewRubberBand.js.map +1 -0
  64. package/dist/LinearGenomeView/components/OverviewScaleBar.d.ts +3 -3
  65. package/dist/LinearGenomeView/components/OverviewScaleBar.js +275 -370
  66. package/dist/LinearGenomeView/components/OverviewScaleBar.js.map +1 -0
  67. package/dist/LinearGenomeView/components/RefNameAutocomplete.d.ts +1 -1
  68. package/dist/LinearGenomeView/components/RefNameAutocomplete.js +237 -324
  69. package/dist/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -0
  70. package/dist/LinearGenomeView/components/RubberBand.js +228 -296
  71. package/dist/LinearGenomeView/components/RubberBand.js.map +1 -0
  72. package/dist/LinearGenomeView/components/Ruler.js +45 -90
  73. package/dist/LinearGenomeView/components/Ruler.js.map +1 -0
  74. package/dist/LinearGenomeView/components/ScaleBar.d.ts +8 -403
  75. package/dist/LinearGenomeView/components/ScaleBar.js +121 -172
  76. package/dist/LinearGenomeView/components/ScaleBar.js.map +1 -0
  77. package/dist/LinearGenomeView/components/SearchBox.js +155 -166
  78. package/dist/LinearGenomeView/components/SearchBox.js.map +1 -0
  79. package/dist/LinearGenomeView/components/SearchResultsDialog.d.ts +0 -1
  80. package/dist/LinearGenomeView/components/SearchResultsDialog.js +105 -149
  81. package/dist/LinearGenomeView/components/SearchResultsDialog.js.map +1 -0
  82. package/dist/LinearGenomeView/components/SequenceDialog.js +219 -272
  83. package/dist/LinearGenomeView/components/SequenceDialog.js.map +1 -0
  84. package/dist/LinearGenomeView/components/TrackContainer.d.ts +2 -1
  85. package/dist/LinearGenomeView/components/TrackContainer.js +113 -158
  86. package/dist/LinearGenomeView/components/TrackContainer.js.map +1 -0
  87. package/dist/LinearGenomeView/components/TrackLabel.d.ts +6 -42
  88. package/dist/LinearGenomeView/components/TrackLabel.js +113 -133
  89. package/dist/LinearGenomeView/components/TrackLabel.js.map +1 -0
  90. package/dist/LinearGenomeView/components/TracksContainer.d.ts +1 -1
  91. package/dist/LinearGenomeView/components/TracksContainer.js +172 -199
  92. package/dist/LinearGenomeView/components/TracksContainer.js.map +1 -0
  93. package/dist/LinearGenomeView/components/ZoomControls.js +72 -87
  94. package/dist/LinearGenomeView/components/ZoomControls.js.map +1 -0
  95. package/dist/LinearGenomeView/components/util.js +94 -71
  96. package/dist/LinearGenomeView/components/util.js.map +1 -0
  97. package/dist/LinearGenomeView/index.d.ts +64 -77
  98. package/dist/LinearGenomeView/index.js +1035 -1412
  99. package/dist/LinearGenomeView/index.js.map +1 -0
  100. package/dist/LinearGenomeView/util.js +76 -83
  101. package/dist/LinearGenomeView/util.js.map +1 -0
  102. package/dist/index.d.ts +98 -48
  103. package/dist/index.js +225 -295
  104. package/dist/index.js.map +1 -0
  105. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.d.ts +9 -0
  106. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js +68 -0
  107. package/esm/BaseLinearDisplay/components/BaseLinearDisplay.js.map +1 -0
  108. package/esm/BaseLinearDisplay/components/Block.d.ts +15 -0
  109. package/esm/BaseLinearDisplay/components/Block.js +46 -0
  110. package/esm/BaseLinearDisplay/components/Block.js.map +1 -0
  111. package/esm/BaseLinearDisplay/components/LinearBlocks.d.ts +22 -0
  112. package/esm/BaseLinearDisplay/components/LinearBlocks.js +62 -0
  113. package/esm/BaseLinearDisplay/components/LinearBlocks.js.map +1 -0
  114. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.d.ts +4 -0
  115. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js +114 -0
  116. package/esm/BaseLinearDisplay/components/ServerSideRenderedBlockContent.js.map +1 -0
  117. package/esm/BaseLinearDisplay/components/Tooltip.d.ts +8 -0
  118. package/esm/BaseLinearDisplay/components/Tooltip.js +64 -0
  119. package/esm/BaseLinearDisplay/components/Tooltip.js.map +1 -0
  120. package/esm/BaseLinearDisplay/index.d.ts +5 -0
  121. package/esm/BaseLinearDisplay/index.js +4 -0
  122. package/esm/BaseLinearDisplay/index.js.map +1 -0
  123. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +232 -0
  124. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js +541 -0
  125. package/esm/BaseLinearDisplay/models/BaseLinearDisplayModel.js.map +1 -0
  126. package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.d.ts +1 -0
  127. package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js +14 -0
  128. package/esm/BaseLinearDisplay/models/baseLinearDisplayConfigSchema.js.map +1 -0
  129. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +96 -0
  130. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js +225 -0
  131. package/esm/BaseLinearDisplay/models/serverSideRenderedBlock.js.map +1 -0
  132. package/esm/LinearBareDisplay/configSchema.d.ts +2 -0
  133. package/esm/LinearBareDisplay/configSchema.js +9 -0
  134. package/esm/LinearBareDisplay/configSchema.js.map +1 -0
  135. package/esm/LinearBareDisplay/index.d.ts +2 -0
  136. package/esm/LinearBareDisplay/index.js +3 -0
  137. package/esm/LinearBareDisplay/index.js.map +1 -0
  138. package/esm/LinearBareDisplay/model.d.ts +194 -0
  139. package/esm/LinearBareDisplay/model.js +28 -0
  140. package/esm/LinearBareDisplay/model.js.map +1 -0
  141. package/esm/LinearBasicDisplay/components/SetMaxHeight.d.ts +10 -0
  142. package/esm/LinearBasicDisplay/components/SetMaxHeight.js +40 -0
  143. package/esm/LinearBasicDisplay/components/SetMaxHeight.js.map +1 -0
  144. package/esm/LinearBasicDisplay/configSchema.d.ts +2 -0
  145. package/esm/LinearBasicDisplay/configSchema.js +14 -0
  146. package/esm/LinearBasicDisplay/configSchema.js.map +1 -0
  147. package/esm/LinearBasicDisplay/index.d.ts +2 -0
  148. package/esm/LinearBasicDisplay/index.js +3 -0
  149. package/esm/LinearBasicDisplay/index.js.map +1 -0
  150. package/esm/LinearBasicDisplay/model.d.ts +218 -0
  151. package/esm/LinearBasicDisplay/model.js +127 -0
  152. package/esm/LinearBasicDisplay/model.js.map +1 -0
  153. package/esm/LinearGenomeView/components/CenterLine.d.ts +8 -0
  154. package/esm/LinearGenomeView/components/CenterLine.js +40 -0
  155. package/esm/LinearGenomeView/components/CenterLine.js.map +1 -0
  156. package/esm/LinearGenomeView/components/ExportSvgDialog.d.ts +6 -0
  157. package/esm/LinearGenomeView/components/ExportSvgDialog.js +52 -0
  158. package/esm/LinearGenomeView/components/ExportSvgDialog.js.map +1 -0
  159. package/esm/LinearGenomeView/components/Gridlines.d.ts +8 -0
  160. package/esm/LinearGenomeView/components/Gridlines.js +71 -0
  161. package/esm/LinearGenomeView/components/Gridlines.js.map +1 -0
  162. package/esm/LinearGenomeView/components/Header.d.ts +7 -0
  163. package/esm/LinearGenomeView/components/Header.js +81 -0
  164. package/esm/LinearGenomeView/components/Header.js.map +1 -0
  165. package/esm/LinearGenomeView/components/HelpDialog.d.ts +4 -0
  166. package/esm/LinearGenomeView/components/HelpDialog.js +58 -0
  167. package/esm/LinearGenomeView/components/HelpDialog.js.map +1 -0
  168. package/esm/LinearGenomeView/components/ImportForm.d.ts +7 -0
  169. package/esm/LinearGenomeView/components/ImportForm.js +141 -0
  170. package/esm/LinearGenomeView/components/ImportForm.js.map +1 -0
  171. package/esm/LinearGenomeView/components/LinearGenomeView.d.ts +7 -0
  172. package/esm/LinearGenomeView/components/LinearGenomeView.js +63 -0
  173. package/esm/LinearGenomeView/components/LinearGenomeView.js.map +1 -0
  174. package/esm/LinearGenomeView/components/LinearGenomeViewSvg.d.ts +4 -0
  175. package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js +132 -0
  176. package/esm/LinearGenomeView/components/LinearGenomeViewSvg.js.map +1 -0
  177. package/esm/LinearGenomeView/components/MiniControls.d.ts +6 -0
  178. package/esm/LinearGenomeView/components/MiniControls.js +25 -0
  179. package/esm/LinearGenomeView/components/MiniControls.js.map +1 -0
  180. package/esm/LinearGenomeView/components/OverviewRubberBand.d.ts +22 -0
  181. package/esm/LinearGenomeView/components/OverviewRubberBand.js +197 -0
  182. package/esm/LinearGenomeView/components/OverviewRubberBand.js.map +1 -0
  183. package/esm/LinearGenomeView/components/OverviewScaleBar.d.ts +148 -0
  184. package/esm/LinearGenomeView/components/OverviewScaleBar.js +287 -0
  185. package/esm/LinearGenomeView/components/OverviewScaleBar.js.map +1 -0
  186. package/esm/LinearGenomeView/components/RefNameAutocomplete.d.ts +22 -0
  187. package/esm/LinearGenomeView/components/RefNameAutocomplete.js +136 -0
  188. package/esm/LinearGenomeView/components/RefNameAutocomplete.js.map +1 -0
  189. package/esm/LinearGenomeView/components/RubberBand.d.ts +9 -0
  190. package/esm/LinearGenomeView/components/RubberBand.js +197 -0
  191. package/esm/LinearGenomeView/components/RubberBand.js.map +1 -0
  192. package/esm/LinearGenomeView/components/Ruler.d.ts +27 -0
  193. package/esm/LinearGenomeView/components/Ruler.js +50 -0
  194. package/esm/LinearGenomeView/components/Ruler.js.map +1 -0
  195. package/esm/LinearGenomeView/components/ScaleBar.d.ts +10 -0
  196. package/esm/LinearGenomeView/components/ScaleBar.js +112 -0
  197. package/esm/LinearGenomeView/components/ScaleBar.js.map +1 -0
  198. package/esm/LinearGenomeView/components/SearchBox.d.ts +8 -0
  199. package/esm/LinearGenomeView/components/SearchBox.js +94 -0
  200. package/esm/LinearGenomeView/components/SearchBox.js.map +1 -0
  201. package/esm/LinearGenomeView/components/SearchResultsDialog.d.ts +7 -0
  202. package/esm/LinearGenomeView/components/SearchResultsDialog.js +107 -0
  203. package/esm/LinearGenomeView/components/SearchResultsDialog.js.map +1 -0
  204. package/esm/LinearGenomeView/components/SequenceDialog.d.ts +8 -0
  205. package/esm/LinearGenomeView/components/SequenceDialog.js +147 -0
  206. package/esm/LinearGenomeView/components/SequenceDialog.js.map +1 -0
  207. package/esm/LinearGenomeView/components/TrackContainer.d.ts +10 -0
  208. package/esm/LinearGenomeView/components/TrackContainer.js +104 -0
  209. package/esm/LinearGenomeView/components/TrackContainer.js.map +1 -0
  210. package/esm/LinearGenomeView/components/TrackLabel.d.ts +8 -0
  211. package/esm/LinearGenomeView/components/TrackLabel.js +88 -0
  212. package/esm/LinearGenomeView/components/TrackLabel.js.map +1 -0
  213. package/{dist/LinearGenomeView/components/VerticalGuides.d.ts → esm/LinearGenomeView/components/TracksContainer.d.ts} +4 -3
  214. package/esm/LinearGenomeView/components/TracksContainer.js +142 -0
  215. package/esm/LinearGenomeView/components/TracksContainer.js.map +1 -0
  216. package/esm/LinearGenomeView/components/ZoomControls.d.ts +7 -0
  217. package/esm/LinearGenomeView/components/ZoomControls.js +32 -0
  218. package/esm/LinearGenomeView/components/ZoomControls.js.map +1 -0
  219. package/esm/LinearGenomeView/components/util.d.ts +14 -0
  220. package/esm/LinearGenomeView/components/util.js +17 -0
  221. package/esm/LinearGenomeView/components/util.js.map +1 -0
  222. package/esm/LinearGenomeView/index.d.ts +275 -0
  223. package/esm/LinearGenomeView/index.js +978 -0
  224. package/esm/LinearGenomeView/index.js.map +1 -0
  225. package/esm/LinearGenomeView/util.d.ts +14 -0
  226. package/esm/LinearGenomeView/util.js +62 -0
  227. package/esm/LinearGenomeView/util.js.map +1 -0
  228. package/esm/index.d.ts +615 -0
  229. package/esm/index.js +127 -0
  230. package/esm/index.js.map +1 -0
  231. package/package.json +22 -15
  232. package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx +4 -4
  233. package/src/BaseLinearDisplay/components/Block.tsx +5 -5
  234. package/src/BaseLinearDisplay/components/LinearBlocks.tsx +4 -4
  235. package/src/BaseLinearDisplay/components/ServerSideRenderedBlockContent.tsx +9 -9
  236. package/src/BaseLinearDisplay/components/Tooltip.tsx +14 -4
  237. package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +6 -4
  238. package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +1 -1
  239. package/src/LinearBasicDisplay/components/SetMaxHeight.tsx +10 -7
  240. package/src/LinearBasicDisplay/model.ts +19 -11
  241. package/src/LinearGenomeView/components/CenterLine.tsx +6 -11
  242. package/src/LinearGenomeView/components/ExportSvgDialog.tsx +5 -5
  243. package/src/LinearGenomeView/components/{VerticalGuides.tsx → Gridlines.tsx} +9 -11
  244. package/src/LinearGenomeView/components/Header.tsx +10 -15
  245. package/src/LinearGenomeView/components/HelpDialog.tsx +5 -5
  246. package/src/LinearGenomeView/components/ImportForm.tsx +6 -12
  247. package/src/LinearGenomeView/components/LinearGenomeView.test.js +16 -6
  248. package/src/LinearGenomeView/components/LinearGenomeView.tsx +6 -9
  249. package/src/LinearGenomeView/components/MiniControls.tsx +29 -40
  250. package/src/LinearGenomeView/components/OverviewRubberBand.tsx +20 -29
  251. package/src/LinearGenomeView/components/OverviewScaleBar.tsx +61 -59
  252. package/src/LinearGenomeView/components/RefNameAutocomplete.tsx +13 -44
  253. package/src/LinearGenomeView/components/RubberBand.tsx +12 -18
  254. package/src/LinearGenomeView/components/Ruler.tsx +5 -11
  255. package/src/LinearGenomeView/components/ScaleBar.tsx +23 -27
  256. package/src/LinearGenomeView/components/SearchBox.tsx +4 -3
  257. package/src/LinearGenomeView/components/SearchResultsDialog.tsx +7 -6
  258. package/src/LinearGenomeView/components/SequenceDialog.tsx +10 -10
  259. package/src/LinearGenomeView/components/TrackContainer.tsx +29 -39
  260. package/src/LinearGenomeView/components/TrackLabel.tsx +76 -79
  261. package/src/LinearGenomeView/components/TracksContainer.tsx +10 -15
  262. package/src/LinearGenomeView/components/ZoomControls.tsx +12 -13
  263. package/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.js.snap +500 -550
  264. package/src/LinearGenomeView/index.test.ts +15 -36
  265. package/src/LinearGenomeView/index.tsx +390 -564
  266. package/src/index.ts +1 -1
  267. package/dist/LinearBareDisplay/index.test.js +0 -33
  268. package/dist/LinearGenomeView/components/LinearGenomeView.test.js +0 -234
  269. package/dist/LinearGenomeView/components/ScaleBar.test.js +0 -180
  270. package/dist/LinearGenomeView/components/VerticalGuides.js +0 -116
  271. package/dist/LinearGenomeView/index.test.js +0 -1187
  272. package/dist/LinearGenomeView/util.test.js +0 -78
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  "use strict";
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-
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- var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
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- Object.defineProperty(exports, "__esModule", {
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- value: true
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- });
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- exports.default = void 0;
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- var _styles = require("@material-ui/core/styles");
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- return String(num);
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- }
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- var useStyles = (0, _styles.makeStyles)(function
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- /* theme */
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- () {
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- return {
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+ var __importDefault = (this && this.__importDefault) || function (mod) {
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+ return (mod && mod.__esModule) ? mod : { "default": mod };
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+ };
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+ Object.defineProperty(exports, "__esModule", { value: true });
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+ var mui_1 = require("tss-react/mui");
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+ var mobx_react_1 = require("mobx-react");
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+ var prop_types_1 = __importDefault(require("prop-types"));
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+ var react_1 = __importDefault(require("react"));
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+ var util_1 = require("../util");
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+ var util_2 = require("@jbrowse/core/util");
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+ var useStyles = (0, mui_1.makeStyles)()(function ( /* theme */) { return ({
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- fontSize: '11px' // fill: theme.palette.text.primary,
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- stroke: '#555' // stroke: theme.palette.text.secondary,
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- stroke: '#999' // stroke: theme.palette.text.hint,
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-
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- });
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- function Ruler(_ref) {
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- var start = _ref.start,
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- end = _ref.end,
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- bpPerPx = _ref.bpPerPx,
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- reversed = _ref.reversed,
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- major = _ref.major,
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- minor = _ref.minor;
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- var classes = useStyles();
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- var ticks = (0, _util.makeTicks)(start, end, bpPerPx, major, minor);
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- return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, ticks.map(function (tick) {
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- var x = (reversed ? end - tick.base : tick.base - start) / bpPerPx;
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- strokeWidth: 1,
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- stroke: tick.type === 'major' ? '#555' : '#999',
66
- className: tick.type === 'major' ? classes.majorTick : classes.minorTick,
67
- "data-bp": tick.base
68
- });
69
- }), ticks.filter(function (tick) {
70
- return tick.type === 'major';
71
- }).map(function (tick) {
72
- var x = (reversed ? end - tick.base : tick.base - start) / bpPerPx;
73
- return /*#__PURE__*/_react.default.createElement("text", {
74
- x: x - 3,
75
- y: 7 + 11,
76
- key: "label-".concat(tick.base),
77
- style: {
78
- fontSize: '11px'
79
- },
80
- className: classes.majorTickLabel
81
- }, mathPower(tick.base + 1));
82
- }));
22
+ stroke: '#999',
23
+ // stroke: theme.palette.text.hint,
24
+ },
25
+ }); });
26
+ function Ruler(_a) {
27
+ var start = _a.start, end = _a.end, bpPerPx = _a.bpPerPx, reversed = _a.reversed, major = _a.major, minor = _a.minor;
28
+ var classes = useStyles().classes;
29
+ var ticks = (0, util_1.makeTicks)(start, end, bpPerPx, major, minor);
30
+ return (react_1.default.createElement(react_1.default.Fragment, null,
31
+ ticks.map(function (tick) {
32
+ var x = (reversed ? end - tick.base : tick.base - start) / bpPerPx;
33
+ return (react_1.default.createElement("line", { key: tick.base, x1: x, x2: x, y1: 0, y2: tick.type === 'major' ? 6 : 4, strokeWidth: 1, stroke: tick.type === 'major' ? '#555' : '#999', className: tick.type === 'major' ? classes.majorTick : classes.minorTick, "data-bp": tick.base }));
34
+ }),
35
+ ticks
36
+ .filter(function (tick) { return tick.type === 'major'; })
37
+ .map(function (tick) {
38
+ var x = (reversed ? end - tick.base : tick.base - start) / bpPerPx;
39
+ return (react_1.default.createElement("text", { x: x - 3, y: 7 + 11, key: "label-".concat(tick.base), style: { fontSize: '11px' }, className: classes.majorTickLabel }, (0, util_2.getTickDisplayStr)(tick.base + 1, bpPerPx)));
40
+ })));
83
41
  }
84
-
85
42
  Ruler.propTypes = {
86
- start: _propTypes.default.number.isRequired,
87
- end: _propTypes.default.number.isRequired,
88
- bpPerPx: _propTypes.default.number.isRequired,
89
- reversed: _propTypes.default.bool,
90
- major: _propTypes.default.bool,
91
- minor: _propTypes.default.bool
43
+ start: prop_types_1.default.number.isRequired,
44
+ end: prop_types_1.default.number.isRequired,
45
+ bpPerPx: prop_types_1.default.number.isRequired,
46
+ reversed: prop_types_1.default.bool,
47
+ major: prop_types_1.default.bool,
48
+ minor: prop_types_1.default.bool,
92
49
  };
93
50
  Ruler.defaultProps = {
94
- reversed: false,
95
- major: true,
96
- minor: true
51
+ reversed: false,
52
+ major: true,
53
+ minor: true,
97
54
  };
98
-
99
- var _default = (0, _mobxReact.observer)(Ruler);
100
-
101
- exports.default = _default;
55
+ exports.default = (0, mobx_react_1.observer)(Ruler);
56
+ //# sourceMappingURL=Ruler.js.map
@@ -0,0 +1 @@
1
+ {"version":3,"file":"Ruler.js","sourceRoot":"","sources":["../../../src/LinearGenomeView/components/Ruler.tsx"],"names":[],"mappings":";;;;;AAAA,qCAA0C;AAC1C,yCAAqC;AACrC,0DAAuC;AACvC,gDAAyB;AACzB,gCAAmC;AACnC,2CAAsD;AAEtD,IAAM,SAAS,GAAG,IAAA,gBAAU,GAAE,CAAC,WAAC,WAAW,IAAK,OAAA,CAAC;IAC/C,cAAc,EAAE;QACd,QAAQ,EAAE,MAAM;QAChB,oCAAoC;KACrC;IACD,SAAS,EAAE;QACT,MAAM,EAAE,MAAM;QACd,wCAAwC;KACzC;IACD,SAAS,EAAE;QACT,MAAM,EAAE,MAAM;QACd,mCAAmC;KACpC;CACF,CAAC,EAb8C,CAa9C,CAAC,CAAA;AAEH,SAAS,KAAK,CAAC,EAcd;QAbC,KAAK,WAAA,EACL,GAAG,SAAA,EACH,OAAO,aAAA,EACP,QAAQ,cAAA,EACR,KAAK,WAAA,EACL,KAAK,WAAA;IASG,IAAA,OAAO,GAAK,SAAS,EAAE,QAAhB,CAAgB;IAC/B,IAAM,KAAK,GAAG,IAAA,gBAAS,EAAC,KAAK,EAAE,GAAG,EAAE,OAAO,EAAE,KAAK,EAAE,KAAK,CAAC,CAAA;IAC1D,OAAO,CACL;QACG,KAAK,CAAC,GAAG,CAAC,UAAA,IAAI;YACb,IAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,GAAG,KAAK,CAAC,GAAG,OAAO,CAAA;YACpE,OAAO,CACL,wCACE,GAAG,EAAE,IAAI,CAAC,IAAI,EACd,EAAE,EAAE,CAAC,EACL,EAAE,EAAE,CAAC,EACL,EAAE,EAAE,CAAC,EACL,EAAE,EAAE,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,CAAC,EACjC,WAAW,EAAE,CAAC,EACd,MAAM,EAAE,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC,CAAC,CAAC,MAAM,CAAC,CAAC,CAAC,MAAM,EAC/C,SAAS,EACP,IAAI,CAAC,IAAI,KAAK,OAAO,CAAC,CAAC,CAAC,OAAO,CAAC,SAAS,CAAC,CAAC,CAAC,OAAO,CAAC,SAAS,aAEtD,IAAI,CAAC,IAAI,GAClB,CACH,CAAA;QACH,CAAC,CAAC;QACD,KAAK;aACH,MAAM,CAAC,UAAA,IAAI,IAAI,OAAA,IAAI,CAAC,IAAI,KAAK,OAAO,EAArB,CAAqB,CAAC;aACrC,GAAG,CAAC,UAAA,IAAI;YACP,IAAM,CAAC,GAAG,CAAC,QAAQ,CAAC,CAAC,CAAC,GAAG,GAAG,IAAI,CAAC,IAAI,CAAC,CAAC,CAAC,IAAI,CAAC,IAAI,GAAG,KAAK,CAAC,GAAG,OAAO,CAAA;YACpE,OAAO,CACL,wCACE,CAAC,EAAE,CAAC,GAAG,CAAC,EACR,CAAC,EAAE,CAAC,GAAG,EAAE,EACT,GAAG,EAAE,gBAAS,IAAI,CAAC,IAAI,CAAE,EACzB,KAAK,EAAE,EAAE,QAAQ,EAAE,MAAM,EAAE,EAC3B,SAAS,EAAE,OAAO,CAAC,cAAc,IAEhC,IAAA,wBAAiB,EAAC,IAAI,CAAC,IAAI,GAAG,CAAC,EAAE,OAAO,CAAC,CACrC,CACR,CAAA;QACH,CAAC,CAAC,CACH,CACJ,CAAA;AACH,CAAC;AAED,KAAK,CAAC,SAAS,GAAG;IAChB,KAAK,EAAE,oBAAc,CAAC,MAAM,CAAC,UAAU;IACvC,GAAG,EAAE,oBAAc,CAAC,MAAM,CAAC,UAAU;IACrC,OAAO,EAAE,oBAAc,CAAC,MAAM,CAAC,UAAU;IACzC,QAAQ,EAAE,oBAAc,CAAC,IAAI;IAC7B,KAAK,EAAE,oBAAc,CAAC,IAAI;IAC1B,KAAK,EAAE,oBAAc,CAAC,IAAI;CAC3B,CAAA;AAED,KAAK,CAAC,YAAY,GAAG;IACnB,QAAQ,EAAE,KAAK;IACf,KAAK,EAAE,IAAI;IACX,KAAK,EAAE,IAAI;CACZ,CAAA;AAED,kBAAe,IAAA,qBAAQ,EAAC,KAAK,CAAC,CAAA"}
@@ -1,405 +1,10 @@
1
1
  import React from 'react';
2
- declare const _default: React.ForwardRefExoticComponent<{
3
- model: import("mobx-state-tree").ModelInstanceTypeProps<{
4
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
5
- displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
6
- } & {
7
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
8
- type: import("mobx-state-tree").ISimpleType<"LinearGenomeView">;
9
- offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
10
- bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
11
- displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
12
- refName: import("mobx-state-tree").ISimpleType<string>;
13
- start: import("mobx-state-tree").ISimpleType<number>;
14
- end: import("mobx-state-tree").ISimpleType<number>;
15
- reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
16
- } & {
17
- assemblyName: import("mobx-state-tree").ISimpleType<string>;
18
- }, {
19
- setRefName(newRefName: string): void;
20
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
21
- tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
22
- hideHeader: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
23
- hideHeaderOverview: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
24
- hideNoTracksActive: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
25
- trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<"hierarchical">, [undefined]>;
26
- trackLabels: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
27
- showCenterLine: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
28
- showCytobandsSetting: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
29
- }> & {
30
- width: number;
31
- } & {
32
- menuItems(): import("@jbrowse/core/ui").MenuItem[];
33
- } & {
34
- setDisplayName(name: string): void;
35
- setWidth(newWidth: number): void;
36
- } & {
37
- volatileWidth: number | undefined;
38
- minimumBlockWidth: number;
39
- draggingTrackId: string | undefined;
40
- volatileError: Error | undefined;
41
- afterDisplayedRegionsSetCallbacks: Function[];
42
- scaleFactor: number;
43
- trackRefs: {
44
- [key: string]: any;
45
- };
46
- coarseDynamicBlocks: import("@jbrowse/core/util/blockTypes").BaseBlock[];
47
- coarseTotalBp: number;
48
- leftOffset: import("..").BpOffset | undefined;
49
- rightOffset: import("..").BpOffset | undefined;
50
- searchResults: import("@jbrowse/core/TextSearch/BaseResults").default[] | undefined;
51
- searchQuery: string | undefined;
52
- seqDialogDisplayed: boolean;
53
- } & {
54
- readonly width: number;
55
- readonly interRegionPaddingWidth: number;
56
- readonly assemblyNames: string[];
57
- } & {
58
- readonly assemblyErrors: string;
59
- readonly assembliesInitialized: boolean;
60
- readonly initialized: boolean;
61
- readonly hasDisplayedRegions: boolean;
62
- readonly isSearchDialogDisplayed: boolean;
63
- readonly scaleBarHeight: number;
64
- readonly headerHeight: number;
65
- readonly trackHeights: any;
66
- readonly trackHeightsWithResizeHandles: any;
67
- readonly height: any;
68
- readonly totalBp: number;
69
- readonly maxBpPerPx: number;
70
- readonly minBpPerPx: number;
71
- readonly error: string | Error;
72
- readonly maxOffset: number;
73
- readonly minOffset: number;
74
- readonly displayedRegionsTotalPx: number;
75
- renderProps(): any;
76
- searchScope(assemblyName: string): {
77
- assemblyName: string;
78
- includeAggregateIndexes: boolean;
79
- tracks: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
80
- };
81
- bpToPx({ refName, coord, regionNumber, }: {
82
- refName: string;
83
- coord: number;
84
- regionNumber?: number | undefined;
85
- }): {
86
- index: number;
87
- offsetPx: number;
88
- } | undefined;
89
- pxToBp(px: number): {
90
- oob: boolean;
91
- coord: number;
92
- offset: number;
93
- index: number;
94
- refName: string;
95
- start: number;
96
- end: number;
97
- reversed: boolean;
98
- assemblyName: string;
99
- };
100
- getTrack(id: string): any;
101
- rankSearchResults(results: import("@jbrowse/core/TextSearch/BaseResults").default[]): import("@jbrowse/core/TextSearch/BaseResults").default[];
102
- rewriteOnClicks(trackType: string, viewMenuActions: import("@jbrowse/core/ui").MenuItem[]): void;
103
- readonly trackTypeActions: Map<string, import("@jbrowse/core/ui").MenuItem[]>;
104
- readonly centerLineInfo: {
105
- oob: boolean;
106
- coord: number;
107
- offset: number;
108
- index: number;
109
- refName: string;
110
- start: number;
111
- end: number;
112
- reversed: boolean;
113
- assemblyName: string;
114
- } | undefined;
115
- } & {
116
- setShowCytobands(flag: boolean): void;
117
- setWidth(newWidth: number): void;
118
- setError(error: Error | undefined): void;
119
- toggleHeader(): void;
120
- toggleHeaderOverview(): void;
121
- toggleNoTracksActive(): void;
122
- scrollTo(offsetPx: number): number;
123
- zoomTo(bpPerPx: number): number;
124
- setOffsets(left: import("..").BpOffset | undefined, right: import("..").BpOffset | undefined): void;
125
- setSearchResults(results: import("@jbrowse/core/TextSearch/BaseResults").default[] | undefined, query: string | undefined): void;
126
- setSequenceDialogOpen(open: boolean): void;
127
- setNewView(bpPerPx: number, offsetPx: number): void;
128
- horizontallyFlip(): void;
129
- showTrack(trackId: string, initialSnapshot?: {}, displayInitialSnapshot?: {}): any;
130
- hideTrack(trackId: string): number;
131
- } & {
132
- moveTrack(movingTrackId: string, targetTrackId: string): void;
133
- closeView(): void;
134
- toggleTrack(trackId: string): void;
135
- setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
136
- toggleCenterLine(): void;
137
- setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
138
- activateTrackSelector(): import("@jbrowse/core/util").Widget;
139
- navToLocString(locString: string, optAssemblyName?: string | undefined): void;
140
- navTo(query: import("..").NavLocation): void;
141
- navToMultiple(locations: import("..").NavLocation[]): void;
142
- zoomToDisplayedRegions(leftPx: import("..").BpOffset, rightPx: import("..").BpOffset): void;
143
- getSelectedRegions(leftOffset: import("..").BpOffset | undefined, rightOffset: import("..").BpOffset | undefined): {
144
- start: number;
145
- end: number;
146
- regionNumber?: number | undefined;
147
- reversed?: boolean | undefined;
148
- refName: string;
149
- assemblyName: string;
150
- key: string;
151
- offsetPx: number;
152
- widthPx: number;
153
- variant?: string | undefined;
154
- isLeftEndOfDisplayedRegion?: boolean | undefined;
155
- }[];
156
- afterDisplayedRegionsSet(cb: Function): void;
157
- moveTo(start: import("..").BpOffset, end: import("..").BpOffset): void;
158
- horizontalScroll(distance: number): number;
159
- centerAt(bp: number, refName: string, regionIndex: number): void;
160
- center(): void;
161
- showAllRegions(): void;
162
- showAllRegionsInAssembly(assemblyName?: string | undefined): void;
163
- setDraggingTrackId(idx?: string | undefined): void;
164
- setScaleFactor(factor: number): void;
165
- } & {
166
- slide: (viewWidths: number) => void;
167
- } & {
168
- zoom: (targetBpPerPx: number) => void;
169
- } & {
170
- readonly canShowCytobands: boolean;
171
- readonly showCytobands: boolean;
172
- readonly anyCytobandsExist: boolean;
173
- readonly cytobandOffset: number;
174
- } & {
175
- menuItems(): import("@jbrowse/core/ui").MenuItem[];
176
- } & {
177
- readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
178
- readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
179
- readonly roundedDynamicBlocks: {
180
- start: number;
181
- end: number;
182
- regionNumber?: number | undefined;
183
- reversed?: boolean | undefined;
184
- refName: string;
185
- assemblyName: string;
186
- key: string;
187
- offsetPx: number;
188
- widthPx: number;
189
- variant?: string | undefined;
190
- isLeftEndOfDisplayedRegion?: boolean | undefined;
191
- }[];
192
- readonly visibleLocStrings: string;
193
- readonly coarseVisibleLocStrings: string;
194
- } & {
195
- clearView(): void;
196
- setCoarseDynamicBlocks(blocks: import("@jbrowse/core/util/blockTypes").BlockSet): void;
197
- afterAttach(): void;
198
- } & {
199
- exportSvg(opts?: import("..").ExportSvgOptions): Promise<void>;
200
- } & {
201
- rubberBandMenuItems(): import("@jbrowse/core/ui").MenuItem[];
202
- } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
203
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
204
- displayName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
205
- } & {
206
- id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
207
- type: import("mobx-state-tree").ISimpleType<"LinearGenomeView">;
208
- offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
209
- bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
210
- displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
211
- refName: import("mobx-state-tree").ISimpleType<string>;
212
- start: import("mobx-state-tree").ISimpleType<number>;
213
- end: import("mobx-state-tree").ISimpleType<number>;
214
- reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
215
- } & {
216
- assemblyName: import("mobx-state-tree").ISimpleType<string>;
217
- }, {
218
- setRefName(newRefName: string): void;
219
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
220
- tracks: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>;
221
- hideHeader: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
222
- hideHeaderOverview: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
223
- hideNoTracksActive: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
224
- trackSelectorType: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<"hierarchical">, [undefined]>;
225
- trackLabels: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
226
- showCenterLine: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
227
- showCytobandsSetting: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
228
- }, {
229
- width: number;
230
- } & {
231
- menuItems(): import("@jbrowse/core/ui").MenuItem[];
232
- } & {
233
- setDisplayName(name: string): void;
234
- setWidth(newWidth: number): void;
235
- } & {
236
- volatileWidth: number | undefined;
237
- minimumBlockWidth: number;
238
- draggingTrackId: string | undefined;
239
- volatileError: Error | undefined;
240
- afterDisplayedRegionsSetCallbacks: Function[];
241
- scaleFactor: number;
242
- trackRefs: {
243
- [key: string]: any;
244
- };
245
- coarseDynamicBlocks: import("@jbrowse/core/util/blockTypes").BaseBlock[];
246
- coarseTotalBp: number;
247
- leftOffset: import("..").BpOffset | undefined;
248
- rightOffset: import("..").BpOffset | undefined;
249
- searchResults: import("@jbrowse/core/TextSearch/BaseResults").default[] | undefined;
250
- searchQuery: string | undefined;
251
- seqDialogDisplayed: boolean;
252
- } & {
253
- readonly width: number;
254
- readonly interRegionPaddingWidth: number;
255
- readonly assemblyNames: string[];
256
- } & {
257
- readonly assemblyErrors: string;
258
- readonly assembliesInitialized: boolean;
259
- readonly initialized: boolean;
260
- readonly hasDisplayedRegions: boolean;
261
- readonly isSearchDialogDisplayed: boolean;
262
- readonly scaleBarHeight: number;
263
- readonly headerHeight: number;
264
- readonly trackHeights: any;
265
- readonly trackHeightsWithResizeHandles: any;
266
- readonly height: any;
267
- readonly totalBp: number;
268
- readonly maxBpPerPx: number;
269
- readonly minBpPerPx: number;
270
- readonly error: string | Error;
271
- readonly maxOffset: number;
272
- readonly minOffset: number;
273
- readonly displayedRegionsTotalPx: number;
274
- renderProps(): any;
275
- searchScope(assemblyName: string): {
276
- assemblyName: string;
277
- includeAggregateIndexes: boolean;
278
- tracks: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IAnyType> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IAnyType>>;
279
- };
280
- bpToPx({ refName, coord, regionNumber, }: {
281
- refName: string;
282
- coord: number;
283
- regionNumber?: number | undefined;
284
- }): {
285
- index: number;
286
- offsetPx: number;
287
- } | undefined;
288
- pxToBp(px: number): {
289
- oob: boolean;
290
- coord: number;
291
- offset: number;
292
- index: number;
293
- refName: string;
294
- start: number;
295
- end: number;
296
- reversed: boolean;
297
- assemblyName: string;
298
- };
299
- getTrack(id: string): any;
300
- rankSearchResults(results: import("@jbrowse/core/TextSearch/BaseResults").default[]): import("@jbrowse/core/TextSearch/BaseResults").default[];
301
- rewriteOnClicks(trackType: string, viewMenuActions: import("@jbrowse/core/ui").MenuItem[]): void;
302
- readonly trackTypeActions: Map<string, import("@jbrowse/core/ui").MenuItem[]>;
303
- readonly centerLineInfo: {
304
- oob: boolean;
305
- coord: number;
306
- offset: number;
307
- index: number;
308
- refName: string;
309
- start: number;
310
- end: number;
311
- reversed: boolean;
312
- assemblyName: string;
313
- } | undefined;
314
- } & {
315
- setShowCytobands(flag: boolean): void;
316
- setWidth(newWidth: number): void;
317
- setError(error: Error | undefined): void;
318
- toggleHeader(): void;
319
- toggleHeaderOverview(): void;
320
- toggleNoTracksActive(): void;
321
- scrollTo(offsetPx: number): number;
322
- zoomTo(bpPerPx: number): number;
323
- setOffsets(left: import("..").BpOffset | undefined, right: import("..").BpOffset | undefined): void;
324
- setSearchResults(results: import("@jbrowse/core/TextSearch/BaseResults").default[] | undefined, query: string | undefined): void;
325
- setSequenceDialogOpen(open: boolean): void;
326
- setNewView(bpPerPx: number, offsetPx: number): void;
327
- horizontallyFlip(): void;
328
- showTrack(trackId: string, initialSnapshot?: {}, displayInitialSnapshot?: {}): any;
329
- hideTrack(trackId: string): number;
330
- } & {
331
- moveTrack(movingTrackId: string, targetTrackId: string): void;
332
- closeView(): void;
333
- toggleTrack(trackId: string): void;
334
- setTrackLabels(setting: "offset" | "hidden" | "overlapping"): void;
335
- toggleCenterLine(): void;
336
- setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
337
- activateTrackSelector(): import("@jbrowse/core/util").Widget;
338
- navToLocString(locString: string, optAssemblyName?: string | undefined): void;
339
- navTo(query: import("..").NavLocation): void;
340
- navToMultiple(locations: import("..").NavLocation[]): void;
341
- zoomToDisplayedRegions(leftPx: import("..").BpOffset, rightPx: import("..").BpOffset): void;
342
- getSelectedRegions(leftOffset: import("..").BpOffset | undefined, rightOffset: import("..").BpOffset | undefined): {
343
- start: number;
344
- end: number;
345
- regionNumber?: number | undefined;
346
- reversed?: boolean | undefined;
347
- refName: string;
348
- assemblyName: string;
349
- key: string;
350
- offsetPx: number;
351
- widthPx: number;
352
- variant?: string | undefined;
353
- isLeftEndOfDisplayedRegion?: boolean | undefined;
354
- }[];
355
- afterDisplayedRegionsSet(cb: Function): void;
356
- moveTo(start: import("..").BpOffset, end: import("..").BpOffset): void;
357
- horizontalScroll(distance: number): number;
358
- centerAt(bp: number, refName: string, regionIndex: number): void;
359
- center(): void;
360
- showAllRegions(): void;
361
- showAllRegionsInAssembly(assemblyName?: string | undefined): void;
362
- setDraggingTrackId(idx?: string | undefined): void;
363
- setScaleFactor(factor: number): void;
364
- } & {
365
- slide: (viewWidths: number) => void;
366
- } & {
367
- zoom: (targetBpPerPx: number) => void;
368
- } & {
369
- readonly canShowCytobands: boolean;
370
- readonly showCytobands: boolean;
371
- readonly anyCytobandsExist: boolean;
372
- readonly cytobandOffset: number;
373
- } & {
374
- menuItems(): import("@jbrowse/core/ui").MenuItem[];
375
- } & {
376
- readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
377
- readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
378
- readonly roundedDynamicBlocks: {
379
- start: number;
380
- end: number;
381
- regionNumber?: number | undefined;
382
- reversed?: boolean | undefined;
383
- refName: string;
384
- assemblyName: string;
385
- key: string;
386
- offsetPx: number;
387
- widthPx: number;
388
- variant?: string | undefined;
389
- isLeftEndOfDisplayedRegion?: boolean | undefined;
390
- }[];
391
- readonly visibleLocStrings: string;
392
- readonly coarseVisibleLocStrings: string;
393
- } & {
394
- clearView(): void;
395
- setCoarseDynamicBlocks(blocks: import("@jbrowse/core/util/blockTypes").BlockSet): void;
396
- afterAttach(): void;
397
- } & {
398
- exportSvg(opts?: import("..").ExportSvgOptions): Promise<void>;
399
- } & {
400
- rubberBandMenuItems(): import("@jbrowse/core/ui").MenuItem[];
401
- }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
402
- style?: React.CSSProperties | undefined;
403
- className?: string | undefined;
404
- } & React.RefAttributes<unknown>>;
2
+ import { LinearGenomeViewModel } from '..';
3
+ declare type LGV = LinearGenomeViewModel;
4
+ interface ScaleBarProps {
5
+ model: LGV;
6
+ style?: React.CSSProperties;
7
+ className?: string;
8
+ }
9
+ declare const _default: React.ForwardRefExoticComponent<ScaleBarProps & React.RefAttributes<HTMLDivElement>>;
405
10
  export default _default;