@jbrowse/plugin-linear-genome-view 1.7.11 → 2.0.0

package/dist/LinearGenomeView/components/RubberBand.js

@@ -1,309 +1,242 @@
 "use strict";
-
-var _interopRequireDefault = require("@babel/runtime/helpers/interopRequireDefault");
-
-var _typeof = require("@babel/runtime/helpers/typeof");
-
-Object.defineProperty(exports, "__esModule", {
-  value: true
-});
-exports.default = void 0;
-
-var _slicedToArray2 = _interopRequireDefault(require("@babel/runtime/helpers/slicedToArray"));
-
-var _react = _interopRequireWildcard(require("react"));
-
-var _mobxReact = require("mobx-react");
-
-var _core = require("@material-ui/core");
-
-var _util = require("@jbrowse/core/util");
-
-var _ui = require("@jbrowse/core/ui");
-
-function _getRequireWildcardCache(nodeInterop) { if (typeof WeakMap !== "function") return null; var cacheBabelInterop = new WeakMap(); var cacheNodeInterop = new WeakMap(); return (_getRequireWildcardCache = function _getRequireWildcardCache(nodeInterop) { return nodeInterop ? cacheNodeInterop : cacheBabelInterop; })(nodeInterop); }
-
-function _interopRequireWildcard(obj, nodeInterop) { if (!nodeInterop && obj && obj.__esModule) { return obj; } if (obj === null || _typeof(obj) !== "object" && typeof obj !== "function") { return { default: obj }; } var cache = _getRequireWildcardCache(nodeInterop); if (cache && cache.has(obj)) { return cache.get(obj); } var newObj = {}; var hasPropertyDescriptor = Object.defineProperty && Object.getOwnPropertyDescriptor; for (var key in obj) { if (key !== "default" && Object.prototype.hasOwnProperty.call(obj, key)) { var desc = hasPropertyDescriptor ? Object.getOwnPropertyDescriptor(obj, key) : null; if (desc && (desc.get || desc.set)) { Object.defineProperty(newObj, key, desc); } else { newObj[key] = obj[key]; } } } newObj.default = obj; if (cache) { cache.set(obj, newObj); } return newObj; }
-
-var useStyles = (0, _core.makeStyles)(function (theme) {
-  var background = theme.palette.tertiary ? (0, _core.alpha)(theme.palette.tertiary.main, 0.7) : (0, _core.alpha)(theme.palette.primary.main, 0.7);
-  return {
-    rubberBand: {
-      height: '100%',
-      background: background,
-      position: 'absolute',
-      zIndex: 10,
-      textAlign: 'center',
-      overflow: 'hidden'
-    },
-    rubberBandControl: {
-      cursor: 'crosshair',
-      width: '100%',
-      minHeight: 8
-    },
-    rubberBandText: {
-      color: theme.palette.tertiary ? theme.palette.tertiary.contrastText : theme.palette.primary.contrastText
-    },
-    popover: {
-      mouseEvents: 'none',
-      cursor: 'crosshair'
-    },
-    paper: {
-      paddingLeft: theme.spacing(1),
-      paddingRight: theme.spacing(1)
-    },
-    guide: {
-      pointerEvents: 'none',
-      height: '100%',
-      width: 1,
-      position: 'absolute',
-      zIndex: 10
+var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    var desc = Object.getOwnPropertyDescriptor(m, k);
+    if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
+      desc = { enumerable: true, get: function() { return m[k]; } };
     }
-  };
+    Object.defineProperty(o, k2, desc);
+}) : (function(o, m, k, k2) {
+    if (k2 === undefined) k2 = k;
+    o[k2] = m[k];
+}));
+var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
+    Object.defineProperty(o, "default", { enumerable: true, value: v });
+}) : function(o, v) {
+    o["default"] = v;
 });
-var VerticalGuide = (0, _mobxReact.observer)(function (_ref) {
-  var model = _ref.model,
-      coordX = _ref.coordX;
-  var classes = useStyles();
-  return /*#__PURE__*/_react.default.createElement(_core.Tooltip, {
-    open: true,
-    placement: "top",
-    title: (0, _util.stringify)(model.pxToBp(coordX)),
-    arrow: true
-  }, /*#__PURE__*/_react.default.createElement("div", {
-    className: classes.guide,
-    style: {
-      left: coordX,
-      background: 'red'
+var __importStar = (this && this.__importStar) || function (mod) {
+    if (mod && mod.__esModule) return mod;
+    var result = {};
+    if (mod != null) for (var k in mod) if (k !== "default" && Object.prototype.hasOwnProperty.call(mod, k)) __createBinding(result, mod, k);
+    __setModuleDefault(result, mod);
+    return result;
+};
+var __read = (this && this.__read) || function (o, n) {
+    var m = typeof Symbol === "function" && o[Symbol.iterator];
+    if (!m) return o;
+    var i = m.call(o), r, ar = [], e;
+    try {
+        while ((n === void 0 || n-- > 0) && !(r = i.next()).done) ar.push(r.value);
     }
-  }));
-});
-
-function RubberBand(_ref2) {
-  var model = _ref2.model,
-      _ref2$ControlComponen = _ref2.ControlComponent,
-      ControlComponent = _ref2$ControlComponen === void 0 ? /*#__PURE__*/_react.default.createElement("div", null) : _ref2$ControlComponen;
-
-  var _useState = (0, _react.useState)(),
-      _useState2 = (0, _slicedToArray2.default)(_useState, 2),
-      startX = _useState2[0],
-      setStartX = _useState2[1];
-
-  var _useState3 = (0, _react.useState)(),
-      _useState4 = (0, _slicedToArray2.default)(_useState3, 2),
-      currentX = _useState4[0],
-      setCurrentX = _useState4[1]; // clientX and clientY used for anchorPosition for menu
-  // offsetX used for calculations about width of selection
-
-
-  var _useState5 = (0, _react.useState)(),
-      _useState6 = (0, _slicedToArray2.default)(_useState5, 2),
-      anchorPosition = _useState6[0],
-      setAnchorPosition = _useState6[1];
-
-  var _useState7 = (0, _react.useState)(),
-      _useState8 = (0, _slicedToArray2.default)(_useState7, 2),
-      guideX = _useState8[0],
-      setGuideX = _useState8[1];
-
-  var controlsRef = (0, _react.useRef)(null);
-  var rubberBandRef = (0, _react.useRef)(null);
-  var classes = useStyles();
-  var mouseDragging = startX !== undefined && anchorPosition === undefined;
-  var setOffsets = model.setOffsets,
-      pxToBp = model.pxToBp;
-  (0, _react.useEffect)(function () {
-    function computeOffsets(offsetX) {
-      if (startX === undefined) {
-        return;
-      }
-
-      var leftPx = startX;
-      var rightPx = offsetX; // handles clicking and draging to the left
-
-      if (rightPx < leftPx) {
-        ;
-        var _ref3 = [rightPx, leftPx];
-        leftPx = _ref3[0];
-        rightPx = _ref3[1];
-      }
-
-      var leftOffset = pxToBp(leftPx);
-      var rightOffset = pxToBp(rightPx);
-      return {
-        leftOffset: leftOffset,
-        rightOffset: rightOffset
-      };
+    catch (error) { e = { error: error }; }
+    finally {
+        try {
+            if (r && !r.done && (m = i["return"])) m.call(i);
+        }
+        finally { if (e) throw e.error; }
     }
-
-    function globalMouseMove(event) {
-      if (controlsRef.current && mouseDragging) {
-        var relativeX = event.clientX - controlsRef.current.getBoundingClientRect().left;
+    return ar;
+};
+Object.defineProperty(exports, "__esModule", { value: true });
+var react_1 = __importStar(require("react"));
+var mobx_react_1 = require("mobx-react");
+var material_1 = require("@mui/material");
+var mui_1 = require("tss-react/mui");
+var util_1 = require("@jbrowse/core/util");
+var ui_1 = require("@jbrowse/core/ui");
+var useStyles = (0, mui_1.makeStyles)()(function (theme) {
+    // @ts-ignore
+    var _a = theme.palette, primary = _a.primary, tertiary = _a.tertiary;
+    var background = tertiary
+        ? (0, material_1.alpha)(tertiary.main, 0.7)
+        : (0, material_1.alpha)(primary.main, 0.7);
+    return {
+        rubberBand: {
+            height: '100%',
+            background: background,
+            position: 'absolute',
+            zIndex: 10,
+            textAlign: 'center',
+            overflow: 'hidden',
+        },
+        rubberBandControl: {
+            cursor: 'crosshair',
+            width: '100%',
+            minHeight: 8,
+        },
+        rubberBandText: {
+            color: tertiary ? tertiary.contrastText : primary.contrastText,
+        },
+        popover: {
+            mouseEvents: 'none',
+            cursor: 'crosshair',
+        },
+        paper: {
+            paddingLeft: theme.spacing(1),
+            paddingRight: theme.spacing(1),
+        },
+        guide: {
+            pointerEvents: 'none',
+            height: '100%',
+            width: 1,
+            position: 'absolute',
+            zIndex: 10,
+        },
+    };
+});
+var VerticalGuide = (0, mobx_react_1.observer)(function (_a) {
+    var model = _a.model, coordX = _a.coordX;
+    var classes = useStyles().classes;
+    return (react_1.default.createElement(material_1.Tooltip, { open: true, placement: "top", title: (0, util_1.stringify)(model.pxToBp(coordX)), arrow: true },
+        react_1.default.createElement("div", { className: classes.guide, style: {
+                left: coordX,
+                background: 'red',
+            } })));
+});
+function RubberBand(_a) {
+    var model = _a.model, _b = _a.ControlComponent, ControlComponent = _b === void 0 ? react_1.default.createElement("div", null) : _b;
+    var _c = __read((0, react_1.useState)(), 2), startX = _c[0], setStartX = _c[1];
+    var _d = __read((0, react_1.useState)(), 2), currentX = _d[0], setCurrentX = _d[1];
+    // clientX and clientY used for anchorPosition for menu
+    // offsetX used for calculations about width of selection
+    var _e = __read((0, react_1.useState)(), 2), anchorPosition = _e[0], setAnchorPosition = _e[1];
+    var _f = __read((0, react_1.useState)(), 2), guideX = _f[0], setGuideX = _f[1];
+    var controlsRef = (0, react_1.useRef)(null);
+    var rubberBandRef = (0, react_1.useRef)(null);
+    var classes = useStyles().classes;
+    var mouseDragging = startX !== undefined && anchorPosition === undefined;
+    var setOffsets = model.setOffsets, pxToBp = model.pxToBp;
+    (0, react_1.useEffect)(function () {
+        function computeOffsets(offsetX) {
+            var _a;
+            if (startX === undefined) {
+                return;
+            }
+            var leftPx = startX;
+            var rightPx = offsetX;
+            // handles clicking and draging to the left
+            if (rightPx < leftPx) {
+                ;
+                _a = __read([rightPx, leftPx], 2), leftPx = _a[0], rightPx = _a[1];
+            }
+            var leftOffset = pxToBp(leftPx);
+            var rightOffset = pxToBp(rightPx);
+            return { leftOffset: leftOffset, rightOffset: rightOffset };
+        }
+        function globalMouseMove(event) {
+            if (controlsRef.current && mouseDragging) {
+                var relativeX = event.clientX - controlsRef.current.getBoundingClientRect().left;
+                setCurrentX(relativeX);
+            }
+        }
+        function globalMouseUp(event) {
+            if (startX !== undefined && controlsRef.current) {
+                var clientX = event.clientX, clientY = event.clientY;
+                var ref = controlsRef.current;
+                var offsetX = clientX - ref.getBoundingClientRect().left;
+                // as stated above, store both clientX/Y and offsetX for different
+                // purposes
+                setAnchorPosition({
+                    offsetX: offsetX,
+                    clientX: clientX,
+                    clientY: clientY,
+                });
+                var args = computeOffsets(offsetX);
+                if (args) {
+                    var leftOffset = args.leftOffset, rightOffset = args.rightOffset;
+                    setOffsets(leftOffset, rightOffset);
+                }
+                setGuideX(undefined);
+            }
+        }
+        if (mouseDragging) {
+            window.addEventListener('mousemove', globalMouseMove);
+            window.addEventListener('mouseup', globalMouseUp);
+            return function () {
+                window.removeEventListener('mousemove', globalMouseMove);
+                window.removeEventListener('mouseup', globalMouseUp);
+            };
+        }
+        return function () { };
+    }, [startX, mouseDragging, anchorPosition, setOffsets, pxToBp]);
+    (0, react_1.useEffect)(function () {
+        if (!mouseDragging &&
+            currentX !== undefined &&
+            startX !== undefined &&
+            Math.abs(currentX - startX) <= 3) {
+            handleClose();
+        }
+    }, [mouseDragging, currentX, startX, model.bpPerPx]);
+    function mouseDown(event) {
+        event.preventDefault();
+        event.stopPropagation();
+        var relativeX = event.clientX -
+            event.target.getBoundingClientRect().left;
+        setStartX(relativeX);
         setCurrentX(relativeX);
-      }
     }
-
-    function globalMouseUp(event) {
-      if (startX !== undefined && controlsRef.current) {
-        var clientX = event.clientX,
-            clientY = event.clientY;
-        var ref = controlsRef.current;
-        var offsetX = clientX - ref.getBoundingClientRect().left; // as stated above, store both clientX/Y and offsetX for different
-        // purposes
-
-        setAnchorPosition({
-          offsetX: offsetX,
-          clientX: clientX,
-          clientY: clientY
-        });
-        var args = computeOffsets(offsetX);
-
-        if (args) {
-          var leftOffset = args.leftOffset,
-              rightOffset = args.rightOffset;
-          setOffsets(leftOffset, rightOffset);
-        }
-
+    function mouseMove(event) {
+        var target = event.target;
+        setGuideX(event.clientX - target.getBoundingClientRect().left);
+    }
+    function mouseOut() {
         setGuideX(undefined);
-      }
+        model.setOffsets(undefined, undefined);
     }
-
-    if (mouseDragging) {
-      window.addEventListener('mousemove', globalMouseMove);
-      window.addEventListener('mouseup', globalMouseUp);
-      return function () {
-        window.removeEventListener('mousemove', globalMouseMove);
-        window.removeEventListener('mouseup', globalMouseUp);
-      };
+    function handleClose() {
+        setAnchorPosition(undefined);
+        setStartX(undefined);
+        setCurrentX(undefined);
     }
-
-    return function () {};
-  }, [startX, mouseDragging, anchorPosition, setOffsets, pxToBp]);
-  (0, _react.useEffect)(function () {
-    if (!mouseDragging && currentX !== undefined && startX !== undefined && Math.abs(currentX - startX) <= 3) {
-      handleClose();
+    var open = Boolean(anchorPosition);
+    function handleMenuItemClick(_, callback) {
+        callback();
+        handleClose();
     }
-  }, [mouseDragging, currentX, startX, model.bpPerPx]);
-
-  function mouseDown(event) {
-    event.preventDefault();
-    event.stopPropagation();
-    var relativeX = event.clientX - event.target.getBoundingClientRect().left;
-    setStartX(relativeX);
-    setCurrentX(relativeX);
-  }
-
-  function mouseMove(event) {
-    var target = event.target;
-    setGuideX(event.clientX - target.getBoundingClientRect().left);
-  }
-
-  function mouseOut() {
-    setGuideX(undefined);
-    model.setOffsets(undefined, undefined);
-  }
-
-  function handleClose() {
-    setAnchorPosition(undefined);
-    setStartX(undefined);
-    setCurrentX(undefined);
-  }
-
-  var open = Boolean(anchorPosition);
-
-  function handleMenuItemClick(_, callback) {
-    callback();
-    handleClose();
-  }
-
-  if (startX === undefined) {
-    return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, guideX !== undefined ? /*#__PURE__*/_react.default.createElement(VerticalGuide, {
-      model: model,
-      coordX: guideX
-    }) : null, /*#__PURE__*/_react.default.createElement("div", {
-      "data-testid": "rubberBand_controls",
-      className: classes.rubberBandControl,
-      role: "presentation",
-      ref: controlsRef,
-      onMouseDown: mouseDown,
-      onMouseOut: mouseOut,
-      onMouseMove: mouseMove
-    }, ControlComponent));
-  }
-  /* Calculating Pixels for Mouse Dragging */
-
-
-  var right = anchorPosition ? anchorPosition.offsetX : currentX || 0;
-  var left = right < startX ? right : startX;
-  var width = Math.abs(right - startX);
-  var leftBpOffset = model.pxToBp(left);
-  var rightBpOffset = model.pxToBp(left + width);
-  var numOfBpSelected = Math.ceil(width * model.bpPerPx);
-  return /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, rubberBandRef.current ? /*#__PURE__*/_react.default.createElement(_react.default.Fragment, null, /*#__PURE__*/_react.default.createElement(_core.Popover, {
-    className: classes.popover,
-    classes: {
-      paper: classes.paper
-    },
-    open: true,
-    anchorEl: rubberBandRef.current,
-    anchorOrigin: {
-      vertical: 'top',
-      horizontal: 'left'
-    },
-    transformOrigin: {
-      vertical: 'bottom',
-      horizontal: 'right'
-    },
-    keepMounted: true,
-    disableRestoreFocus: true
-  }, /*#__PURE__*/_react.default.createElement(_core.Typography, null, (0, _util.stringify)(leftBpOffset))), /*#__PURE__*/_react.default.createElement(_core.Popover, {
-    className: classes.popover,
-    classes: {
-      paper: classes.paper
-    },
-    open: true,
-    anchorEl: rubberBandRef.current,
-    anchorOrigin: {
-      vertical: 'top',
-      horizontal: 'right'
-    },
-    transformOrigin: {
-      vertical: 'bottom',
-      horizontal: 'left'
-    },
-    keepMounted: true,
-    disableRestoreFocus: true
-  }, /*#__PURE__*/_react.default.createElement(_core.Typography, null, (0, _util.stringify)(rightBpOffset)))) : null, /*#__PURE__*/_react.default.createElement("div", {
-    ref: rubberBandRef,
-    className: classes.rubberBand,
-    style: {
-      left: left,
-      width: width
+    if (startX === undefined) {
+        return (react_1.default.createElement(react_1.default.Fragment, null,
+            guideX !== undefined ? (react_1.default.createElement(VerticalGuide, { model: model, coordX: guideX })) : null,
+            react_1.default.createElement("div", { "data-testid": "rubberBand_controls", className: classes.rubberBandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent)));
     }
-  }, /*#__PURE__*/_react.default.createElement(_core.Typography, {
-    variant: "h6",
-    className: classes.rubberBandText
-  }, numOfBpSelected.toLocaleString('en-US'), " bp")), /*#__PURE__*/_react.default.createElement("div", {
-    "data-testid": "rubberBand_controls",
-    className: classes.rubberBandControl,
-    role: "presentation",
-    ref: controlsRef,
-    onMouseDown: mouseDown,
-    onMouseOut: mouseOut,
-    onMouseMove: mouseMove
-  }, ControlComponent), anchorPosition ? /*#__PURE__*/_react.default.createElement(_ui.Menu, {
-    anchorReference: "anchorPosition",
-    anchorPosition: {
-      left: anchorPosition.clientX,
-      top: anchorPosition.clientY
-    },
-    onMenuItemClick: handleMenuItemClick,
-    open: open,
-    onClose: handleClose,
-    menuItems: model.rubberBandMenuItems()
-  }) : null);
+    /* Calculating Pixels for Mouse Dragging */
+    var right = anchorPosition ? anchorPosition.offsetX : currentX || 0;
+    var left = right < startX ? right : startX;
+    var width = Math.abs(right - startX);
+    var leftBpOffset = model.pxToBp(left);
+    var rightBpOffset = model.pxToBp(left + width);
+    var numOfBpSelected = Math.ceil(width * model.bpPerPx);
+    return (react_1.default.createElement(react_1.default.Fragment, null,
+        rubberBandRef.current ? (react_1.default.createElement(react_1.default.Fragment, null,
+            react_1.default.createElement(material_1.Popover, { className: classes.popover, classes: {
+                    paper: classes.paper,
+                }, open: true, anchorEl: rubberBandRef.current, anchorOrigin: {
+                    vertical: 'top',
+                    horizontal: 'left',
+                }, transformOrigin: {
+                    vertical: 'bottom',
+                    horizontal: 'right',
+                }, keepMounted: true, disableRestoreFocus: true },
+                react_1.default.createElement(material_1.Typography, null, (0, util_1.stringify)(leftBpOffset))),
+            react_1.default.createElement(material_1.Popover, { className: classes.popover, classes: {
+                    paper: classes.paper,
+                }, open: true, anchorEl: rubberBandRef.current, anchorOrigin: {
+                    vertical: 'top',
+                    horizontal: 'right',
+                }, transformOrigin: {
+                    vertical: 'bottom',
+                    horizontal: 'left',
+                }, keepMounted: true, disableRestoreFocus: true },
+                react_1.default.createElement(material_1.Typography, null, (0, util_1.stringify)(rightBpOffset))))) : null,
+        react_1.default.createElement("div", { ref: rubberBandRef, className: classes.rubberBand, style: { left: left, width: width } },
+            react_1.default.createElement(material_1.Typography, { variant: "h6", className: classes.rubberBandText },
+                numOfBpSelected.toLocaleString('en-US'),
+                " bp")),
+        react_1.default.createElement("div", { "data-testid": "rubberBand_controls", className: classes.rubberBandControl, role: "presentation", ref: controlsRef, onMouseDown: mouseDown, onMouseOut: mouseOut, onMouseMove: mouseMove }, ControlComponent),
+        anchorPosition ? (react_1.default.createElement(ui_1.Menu, { anchorReference: "anchorPosition", anchorPosition: {
+                left: anchorPosition.clientX,
+                top: anchorPosition.clientY,
+            }, onMenuItemClick: handleMenuItemClick, open: open, onClose: handleClose, menuItems: model.rubberBandMenuItems() })) : null));
 }
-
-var _default = (0, _mobxReact.observer)(RubberBand);
-
-exports.default = _default;
+exports.default = (0, mobx_react_1.observer)(RubberBand);
+//# sourceMappingURL=RubberBand.js.map

package/dist/LinearGenomeView/components/RubberBand.js.map

@@ -0,0 +1 @@
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