@jbrowse/plugin-linear-genome-view 1.6.1 → 1.6.5

package/dist/plugin-linear-genome-view.esm.js

@@ -1305,8 +1305,7 @@ var RenderedBlocks = /*#__PURE__*/observer(function (_ref) {
 function LinearBlocks(_ref2) {
   var model = _ref2.model;
   var classes = useStyles$1();
-  var blockDefinitions = model.blockDefinitions; // eslint-disable-next-line @typescript-eslint/no-explicit-any
-
+  var blockDefinitions = model.blockDefinitions;
   var viewModel = getContainingView(model);
   return /*#__PURE__*/React.createElement("div", {
     "data-testid": "Blockset",
@@ -1318,10 +1317,6 @@ function LinearBlocks(_ref2) {
     model: model
   }));
 }
-
-LinearBlocks.propTypes = {
-  model: PropTypes.observableObject.isRequired
-};
 var LinearBlocks$1 = /*#__PURE__*/observer(LinearBlocks);
 
 function round(value) {
@@ -2324,9 +2319,10 @@ var BaseLinearDisplay$1 = /*#__PURE__*/types.compose('BaseLinearDisplay', BaseDi
               case 0:
                 self.setError();
                 aborter = new AbortController();
-                view = getContainingView(self);
+                view = getContainingView(self); // extra check for contentBlocks.length
+                // https://github.com/GMOD/jbrowse-components/issues/2694
 
-                if (view.initialized) {
+                if (!(!view.initialized || !view.staticBlocks.contentBlocks.length)) {
                   _context.next = 5;
                   break;
                 }
@@ -2377,7 +2373,7 @@ var BaseLinearDisplay$1 = /*#__PURE__*/types.compose('BaseLinearDisplay', BaseDi
     afterAttach: function afterAttach() {
       // this autorun performs stats estimation
       //
-      // the chain of events calls estimateRegionStats against the data
+      // the chain of events calls estimateRegionsStats against the data
       // adapter which by default uses featureDensity, but can also respond
       // with a byte size estimate and fetch size limit (data adapter can
       // define what is too much data)
@@ -4674,7 +4670,9 @@ var TrackLabel = /*#__PURE__*/React.forwardRef(function (props, ref) {
     handleClose();
   }
 
-  var items = track.trackMenuItems();
+  var items = [].concat(_toConsumableArray((_session$getTrackActi = session.getTrackActionMenuItems) === null || _session$getTrackActi === void 0 ? void 0 : _session$getTrackActi.call(session, trackConf)), _toConsumableArray(track.trackMenuItems())).sort(function (a, b) {
+    return (b.priority || 0) - (a.priority || 0);
+  });
   return /*#__PURE__*/React.createElement(React.Fragment, null, /*#__PURE__*/React.createElement(Paper, {
     ref: ref,
     className: clsx(className, classes.root)
@@ -4710,9 +4708,7 @@ var TrackLabel = /*#__PURE__*/React.forwardRef(function (props, ref) {
     onMenuItemClick: handleMenuItemClick,
     open: Boolean(anchorEl),
     onClose: handleClose,
-    menuItems: [].concat(_toConsumableArray((_session$getTrackActi = session.getTrackActionMenuItems) === null || _session$getTrackActi === void 0 ? void 0 : _session$getTrackActi.call(session, trackConf)), _toConsumableArray(items)).sort(function (a, b) {
-      return (b.priority || 0) - (a.priority || 0);
-    })
+    menuItems: items
   }));
 });
 var TrackLabel$1 = /*#__PURE__*/observer(TrackLabel);
@@ -6458,6 +6454,11 @@ var RESIZE_HANDLE_HEIGHT = 3;
 var INTER_REGION_PADDING_WIDTH = 2;
 var WIDGET_HEIGHT = 32;
 var SPACING = 7;
+
+function localStorageGetItem(item) {
+  return typeof localStorage !== 'undefined' ? localStorage.getItem(item) : undefined;
+}
+
 function stateModelFactory$1(pluginManager) {
   return types.compose(BaseViewModel, types.model('LinearGenomeView', {
     id: ElementId,
@@ -6472,15 +6473,15 @@ function stateModelFactory$1(pluginManager) {
     hideHeaderOverview: false,
     trackSelectorType: types.optional(types.enumeration(['hierarchical']), 'hierarchical'),
     trackLabels: types.optional(types.string, function () {
-      return localStorage.getItem('lgv-trackLabels') || 'overlapping';
+      return localStorageGetItem('lgv-trackLabels') || 'overlapping';
     }),
     showCenterLine: types.optional(types["boolean"], function () {
-      var setting = localStorage.getItem('lgv-showCenterLine');
-      return setting !== undefined ? !!setting : false;
+      var setting = localStorageGetItem('lgv-showCenterLine');
+      return setting !== undefined && setting !== null ? !!+setting : false;
     }),
     showCytobandsSetting: types.optional(types["boolean"], function () {
-      var setting = localStorage.getItem('lgv-showCytobands');
-      return setting !== undefined ? !!setting : true;
+      var setting = localStorageGetItem('lgv-showCytobands');
+      return setting !== undefined && setting !== null ? !!+setting : true;
     })
   }))["volatile"](function () {
     return {
@@ -7529,8 +7530,6 @@ function stateModelFactory$1(pluginManager) {
 
     };
   }).views(function (self) {
-    var currentlyCalculatedStaticBlocks;
-    var stringifiedCurrentlyCalculatedStaticBlocks = '';
     return {
       menuItems: function menuItems() {
         var canShowCytobands = self.canShowCytobands,
@@ -7653,8 +7652,12 @@ function stateModelFactory$1(pluginManager) {
         }
 
         return menuItems;
-      },
-
+      }
+    };
+  }).views(function (self) {
+    var currentlyCalculatedStaticBlocks;
+    var stringifiedCurrentlyCalculatedStaticBlocks = '';
+    return {
       get staticBlocks() {
         var ret = calculateStaticBlocks(self);
         var sret = JSON.stringify(ret);