@jbrowse/plugin-linear-genome-view 1.4.4 → 1.5.0

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (30) hide show
  1. package/dist/BaseLinearDisplay/models/BaseLinearDisplayModel.d.ts +16 -9
  2. package/dist/BaseLinearDisplay/models/serverSideRenderedBlock.d.ts +2 -2
  3. package/dist/LinearBareDisplay/model.d.ts +8 -8
  4. package/dist/LinearBasicDisplay/model.d.ts +11 -8
  5. package/dist/LinearGenomeView/components/RefNameAutocomplete.d.ts +0 -10
  6. package/dist/LinearGenomeView/components/ScaleBar.d.ts +22 -2
  7. package/dist/LinearGenomeView/components/util.d.ts +2 -0
  8. package/dist/LinearGenomeView/index.d.ts +13 -2
  9. package/dist/index.d.ts +26 -26
  10. package/dist/plugin-linear-genome-view.cjs.development.js +272 -268
  11. package/dist/plugin-linear-genome-view.cjs.development.js.map +1 -1
  12. package/dist/plugin-linear-genome-view.cjs.production.min.js +1 -1
  13. package/dist/plugin-linear-genome-view.cjs.production.min.js.map +1 -1
  14. package/dist/plugin-linear-genome-view.esm.js +272 -269
  15. package/dist/plugin-linear-genome-view.esm.js.map +1 -1
  16. package/package.json +2 -2
  17. package/src/BaseLinearDisplay/components/BaseLinearDisplay.tsx +3 -0
  18. package/src/BaseLinearDisplay/models/BaseLinearDisplayModel.tsx +3 -7
  19. package/src/BaseLinearDisplay/models/serverSideRenderedBlock.ts +15 -13
  20. package/src/LinearBasicDisplay/model.ts +25 -3
  21. package/src/LinearGenomeView/components/ExportSvgDialog.tsx +6 -6
  22. package/src/LinearGenomeView/components/Header.tsx +40 -74
  23. package/src/LinearGenomeView/components/ImportForm.tsx +124 -134
  24. package/src/LinearGenomeView/components/LinearGenomeView.test.js +6 -6
  25. package/src/LinearGenomeView/components/RefNameAutocomplete.tsx +20 -25
  26. package/src/LinearGenomeView/components/SequenceDialog.tsx +1 -1
  27. package/src/LinearGenomeView/components/__snapshots__/LinearGenomeView.test.js.snap +0 -176
  28. package/src/LinearGenomeView/components/util.ts +8 -0
  29. package/src/LinearGenomeView/index.tsx +14 -13
  30. package/src/index.ts +3 -1
@@ -45,6 +45,7 @@ import clone from 'clone'
45
45
  import { AnyConfigurationModel } from '@jbrowse/core/configuration/configurationSchema'
46
46
  import { saveAs } from 'file-saver'
47
47
  import { renderToSvg } from './components/LinearGenomeView'
48
+ import RefNameAutocomplete from './components/RefNameAutocomplete'
48
49
  import ExportSvgDlg from './components/ExportSvgDialog'
49
50
  import ReturnToImportFormDlg from './components/ReturnToImportFormDialog'
50
51
 
@@ -551,9 +552,8 @@ export function stateModelFactory(pluginManager: PluginManager) {
551
552
  initialSnapshot = {},
552
553
  displayInitialSnapshot = {},
553
554
  ) {
554
- const trackConfigSchema = pluginManager.pluggableConfigSchemaType(
555
- 'track',
556
- )
555
+ const trackConfigSchema =
556
+ pluginManager.pluggableConfigSchemaType('track')
557
557
  const configuration = resolveIdentifier(
558
558
  trackConfigSchema,
559
559
  getRoot(self),
@@ -602,9 +602,8 @@ export function stateModelFactory(pluginManager: PluginManager) {
602
602
  },
603
603
 
604
604
  hideTrack(trackId: string) {
605
- const trackConfigSchema = pluginManager.pluggableConfigSchemaType(
606
- 'track',
607
- )
605
+ const trackConfigSchema =
606
+ pluginManager.pluggableConfigSchemaType('track')
608
607
  const configuration = resolveIdentifier(
609
608
  trackConfigSchema,
610
609
  getRoot(self),
@@ -1225,9 +1224,10 @@ export function stateModelFactory(pluginManager: PluginManager) {
1225
1224
  {
1226
1225
  label: 'Return to import form',
1227
1226
  onClick: () => {
1228
- getSession(self).setDialogComponent(ReturnToImportFormDlg, {
1229
- model: self,
1230
- })
1227
+ getSession(self).queueDialog((doneCallback: Function) => [
1228
+ ReturnToImportFormDlg,
1229
+ { model: self, handleClose: doneCallback },
1230
+ ])
1231
1231
  },
1232
1232
  icon: FolderOpenIcon,
1233
1233
  },
@@ -1235,9 +1235,10 @@ export function stateModelFactory(pluginManager: PluginManager) {
1235
1235
  label: 'Export SVG',
1236
1236
  icon: PhotoCameraIcon,
1237
1237
  onClick: () => {
1238
- getSession(self).setDialogComponent(ExportSvgDlg, {
1239
- model: self,
1240
- })
1238
+ getSession(self).queueDialog((doneCallback: Function) => [
1239
+ ExportSvgDlg,
1240
+ { model: self, handleClose: doneCallback },
1241
+ ])
1241
1242
  },
1242
1243
  },
1243
1244
  {
@@ -1415,6 +1416,6 @@ export function stateModelFactory(pluginManager: PluginManager) {
1415
1416
  }))
1416
1417
  }
1417
1418
 
1418
- export { renderToSvg }
1419
+ export { renderToSvg, RefNameAutocomplete }
1419
1420
  export type LinearGenomeViewStateModel = ReturnType<typeof stateModelFactory>
1420
1421
  export type LinearGenomeViewModel = Instance<LinearGenomeViewStateModel>
package/src/index.ts CHANGED
@@ -26,6 +26,7 @@ import {
26
26
  LinearGenomeViewStateModel,
27
27
  stateModelFactory as linearGenomeViewStateModelFactory,
28
28
  renderToSvg,
29
+ RefNameAutocomplete,
29
30
  } from './LinearGenomeView'
30
31
 
31
32
  import {
@@ -121,7 +122,7 @@ export default class LinearGenomeViewPlugin extends Plugin {
121
122
 
122
123
  configure(pluginManager: PluginManager) {
123
124
  if (isAbstractMenuManager(pluginManager.rootModel)) {
124
- pluginManager.rootModel.appendToSubMenu(['File', 'Add'], {
125
+ pluginManager.rootModel.appendToSubMenu(['Add'], {
125
126
  label: 'Linear genome view',
126
127
  icon: LineStyleIcon,
127
128
  onClick: (session: AbstractSessionModel) => {
@@ -140,6 +141,7 @@ export {
140
141
  linearBasicDisplayConfigSchemaFactory,
141
142
  linearBasicDisplayModelFactory,
142
143
  renderToSvg,
144
+ RefNameAutocomplete,
143
145
  }
144
146
 
145
147
  export type { LinearGenomeViewModel, LinearGenomeViewStateModel, BlockModel }