@jbrowse/plugin-legacy-jbrowse 1.7.11 → 2.1.0
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/dist/JBrowse1Connection/configSchema.js +18 -28
- package/dist/JBrowse1Connection/configSchema.js.map +1 -0
- package/dist/JBrowse1Connection/index.js +10 -22
- package/dist/JBrowse1Connection/index.js.map +1 -0
- package/dist/JBrowse1Connection/jb1ConfigLoad.js +387 -501
- package/dist/JBrowse1Connection/jb1ConfigLoad.js.map +1 -0
- package/dist/JBrowse1Connection/jb1ConfigParse.js +414 -435
- package/dist/JBrowse1Connection/jb1ConfigParse.js.map +1 -0
- package/dist/JBrowse1Connection/jb1ToJb2.js +405 -546
- package/dist/JBrowse1Connection/jb1ToJb2.js.map +1 -0
- package/dist/JBrowse1Connection/model.js +49 -57
- package/dist/JBrowse1Connection/model.js.map +1 -0
- package/dist/JBrowse1Connection/types.js +2 -4
- package/dist/JBrowse1Connection/types.js.map +1 -0
- package/dist/JBrowse1Connection/util.js +123 -130
- package/dist/JBrowse1Connection/util.js.map +1 -0
- package/dist/JBrowse1TextSeachAdapter/HttpMap.js +181 -326
- package/dist/JBrowse1TextSeachAdapter/HttpMap.js.map +1 -0
- package/dist/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.js +164 -185
- package/dist/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.js.map +1 -0
- package/dist/JBrowse1TextSeachAdapter/configSchema.js +20 -33
- package/dist/JBrowse1TextSeachAdapter/configSchema.js.map +1 -0
- package/dist/JBrowse1TextSeachAdapter/index.js +10 -22
- package/dist/JBrowse1TextSeachAdapter/index.js.map +1 -0
- package/dist/NCListAdapter/NCListAdapter.js +164 -224
- package/dist/NCListAdapter/NCListAdapter.js.map +1 -0
- package/dist/NCListAdapter/NCListFeature.js +68 -125
- package/dist/NCListAdapter/NCListFeature.js.map +1 -0
- package/dist/NCListAdapter/configSchema.js +17 -26
- package/dist/NCListAdapter/configSchema.js.map +1 -0
- package/dist/NCListAdapter/index.js +8 -14
- package/dist/NCListAdapter/index.js.map +1 -0
- package/dist/index.js +97 -116
- package/dist/index.js.map +1 -0
- package/esm/JBrowse1Connection/configSchema.d.ts +2 -0
- package/esm/JBrowse1Connection/configSchema.js +18 -0
- package/esm/JBrowse1Connection/configSchema.js.map +1 -0
- package/esm/JBrowse1Connection/index.d.ts +2 -0
- package/esm/JBrowse1Connection/index.js +3 -0
- package/esm/JBrowse1Connection/index.js.map +1 -0
- package/esm/JBrowse1Connection/jb1ConfigLoad.d.ts +36 -0
- package/esm/JBrowse1Connection/jb1ConfigLoad.js +281 -0
- package/esm/JBrowse1Connection/jb1ConfigLoad.js.map +1 -0
- package/esm/JBrowse1Connection/jb1ConfigParse.d.ts +11 -0
- package/esm/JBrowse1Connection/jb1ConfigParse.js +377 -0
- package/esm/JBrowse1Connection/jb1ConfigParse.js.map +1 -0
- package/esm/JBrowse1Connection/jb1ToJb2.d.ts +49 -0
- package/esm/JBrowse1Connection/jb1ToJb2.js +424 -0
- package/esm/JBrowse1Connection/jb1ToJb2.js.map +1 -0
- package/esm/JBrowse1Connection/model.d.ts +15 -0
- package/esm/JBrowse1Connection/model.js +44 -0
- package/esm/JBrowse1Connection/model.js.map +1 -0
- package/esm/JBrowse1Connection/types.d.ts +91 -0
- package/esm/JBrowse1Connection/types.js +2 -0
- package/esm/JBrowse1Connection/types.js.map +1 -0
- package/esm/JBrowse1Connection/util.d.ts +26 -0
- package/esm/JBrowse1Connection/util.js +136 -0
- package/esm/JBrowse1Connection/util.js.map +1 -0
- package/esm/JBrowse1TextSeachAdapter/HttpMap.d.ts +39 -0
- package/esm/JBrowse1TextSeachAdapter/HttpMap.js +89 -0
- package/esm/JBrowse1TextSeachAdapter/HttpMap.js.map +1 -0
- package/esm/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.d.ts +33 -0
- package/esm/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.js +67 -0
- package/esm/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.js.map +1 -0
- package/esm/JBrowse1TextSeachAdapter/configSchema.d.ts +2 -0
- package/esm/JBrowse1TextSeachAdapter/configSchema.js +20 -0
- package/esm/JBrowse1TextSeachAdapter/configSchema.js.map +1 -0
- package/esm/JBrowse1TextSeachAdapter/index.d.ts +2 -0
- package/esm/JBrowse1TextSeachAdapter/index.js +3 -0
- package/esm/JBrowse1TextSeachAdapter/index.js.map +1 -0
- package/esm/NCListAdapter/NCListAdapter.d.ts +31 -0
- package/esm/NCListAdapter/NCListAdapter.js +62 -0
- package/esm/NCListAdapter/NCListAdapter.js.map +1 -0
- package/esm/NCListAdapter/NCListFeature.d.ts +31 -0
- package/esm/NCListAdapter/NCListFeature.js +78 -0
- package/esm/NCListAdapter/NCListFeature.js.map +1 -0
- package/esm/NCListAdapter/configSchema.d.ts +2 -0
- package/esm/NCListAdapter/configSchema.js +16 -0
- package/esm/NCListAdapter/configSchema.js.map +1 -0
- package/esm/NCListAdapter/index.d.ts +1 -0
- package/esm/NCListAdapter/index.js +2 -0
- package/esm/NCListAdapter/index.js.map +1 -0
- package/esm/index.d.ts +6 -0
- package/esm/index.js +50 -0
- package/esm/index.js.map +1 -0
- package/package.json +17 -8
- package/src/NCListAdapter/NCListAdapter.test.ts +24 -16
- package/dist/JBrowse1TextSeachAdapter/HttpMap.test.js +0 -118
- package/dist/JBrowse1TextSeachAdapter/JBrowse1TextSearchAdapter.test.js +0 -98
- package/dist/NCListAdapter/NCListAdapter.test.js +0 -108
- package/dist/declare.d.js +0 -1
- package/dist/index.test.js +0 -44
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dataDirLocation: {
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type: 'fileLocation',
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defaultValue: {
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uri: 'http://mysite.com/jbrowse/data/',
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locationType: 'UriLocation'
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var models_1 = require("@jbrowse/core/pluggableElementTypes/models");
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var configuration_1 = require("@jbrowse/core/configuration");
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exports.default = (0, configuration_1.ConfigurationSchema)('JBrowse1Connection', {
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dataDirLocation: {
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type: 'fileLocation',
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defaultValue: {
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uri: 'http://mysite.com/jbrowse/data/',
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locationType: 'UriLocation',
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},
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description: 'the location of the JBrowse 1 data directory, often something like http://mysite.com/jbrowse/data/',
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}, {
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baseConfiguration: _models.baseConnectionConfig
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});
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exports.default = _default;
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assemblyNames: {
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description: 'name of the assembly the connection belongs to, should be a single entry',
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type: 'stringArray',
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defaultValue: [],
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},
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}, { baseConfiguration: models_1.baseConnectionConfig });
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//# sourceMappingURL=configSchema.js.map
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{"version":3,"file":"configSchema.js","sourceRoot":"","sources":["../../src/JBrowse1Connection/configSchema.ts"],"names":[],"mappings":";;AAAA,qEAAiF;AACjF,6DAAiE;AAEjE,kBAAe,IAAA,mCAAmB,EAChC,oBAAoB,EACpB;IACE,eAAe,EAAE;QACf,IAAI,EAAE,cAAc;QACpB,YAAY,EAAE;YACZ,GAAG,EAAE,iCAAiC;YACtC,YAAY,EAAE,aAAa;SAC5B;QACD,WAAW,EACT,oGAAoG;KACvG;IACD,aAAa,EAAE;QACb,WAAW,EACT,0EAA0E;QAC5E,IAAI,EAAE,aAAa;QACnB,YAAY,EAAE,EAAE;KACjB;CACF,EACD,EAAE,iBAAiB,EAAE,6BAAoB,EAAE,CAC5C,CAAA"}
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});
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Object.defineProperty(exports, "modelFactory", {
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enumerable: true,
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get: function get() {
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return _model.default;
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}
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});
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var _model = _interopRequireDefault(require("./model"));
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var _configSchema = _interopRequireDefault(require("./configSchema"));
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var __importDefault = (this && this.__importDefault) || function (mod) {
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return (mod && mod.__esModule) ? mod : { "default": mod };
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};
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Object.defineProperty(exports, "__esModule", { value: true });
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exports.configSchema = exports.modelFactory = void 0;
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var model_1 = require("./model");
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Object.defineProperty(exports, "modelFactory", { enumerable: true, get: function () { return __importDefault(model_1).default; } });
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var configSchema_1 = require("./configSchema");
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Object.defineProperty(exports, "configSchema", { enumerable: true, get: function () { return __importDefault(configSchema_1).default; } });
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//# sourceMappingURL=index.js.map
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{"version":3,"file":"index.js","sourceRoot":"","sources":["../../src/JBrowse1Connection/index.ts"],"names":[],"mappings":";;;;;;AAAA,iCAAiD;AAAxC,sHAAA,OAAO,OAAgB;AAChC,+CAAwD;AAA/C,6HAAA,OAAO,OAAgB"}
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