@jbrowse/plugin-dotplot-view 2.11.2 → 2.12.1

package/dist/DotplotView/model.d.ts

@@ -36,22 +36,13 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
     drawCigar: import("mobx-state-tree").IType<boolean | undefined, boolean, boolean>;
     hview: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
         id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-        displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        }, {
-            setRefName(newRefName: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        displayedRegions: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[]>, [undefined]>;
         bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
         offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
         interRegionPaddingWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
         minimumBlockWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
     }, {
-        features: import("@jbrowse/core/util").Feature[] | undefined;
+        features: undefined | import("@jbrowse/core/util").Feature[];
         volatileWidth: number;
     } & {
         setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
@@ -63,12 +54,7 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         readonly displayedRegionsTotalPx: number;
         readonly maxOffset: number;
         readonly minOffset: number;
-        readonly totalBp: number; /**
-         * #stateModel DotplotView
-         * #category view
-         * extends
-         * - [BaseViewModel](../baseviewmodel)
-         */
+        readonly totalBp: number;
     } & {
         readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
         readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
@@ -77,34 +63,30 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         pxToBp(px: number): {
             coord: number;
             index: number;
-            refName: string; /**
-             * #property
-             */
+            refName: string;
             oob: boolean;
             assemblyName: string;
             offset: number;
             start: number;
             end: number;
-            reversed: boolean;
+            reversed?: boolean;
         };
         bpToPx({ refName, coord, regionNumber, }: {
             refName: string;
             coord: number;
-            regionNumber?: number | undefined;
+            regionNumber?: number;
         }): number | undefined;
     } & {
         setFeatures(features: import("@jbrowse/core/util").Feature[]): void;
         showAllRegions(): void;
-        zoomOut(): void; /**
-         * #property
-         */
+        zoomOut(): void;
         zoomIn(): void;
-        zoomTo(bpPerPx: number, offset?: number | undefined): number;
+        zoomTo(bpPerPx: number, offset?: number): number;
         scrollTo(offsetPx: number): number;
         centerAt(coord: number, refName: string | undefined, regionNumber: number): void;
         scroll(distance: number): number;
     } & {
-        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined): void;
+        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset): void;
     } & {
         setScaleFactor(n: number): void;
         center(): void;
@@ -120,22 +102,13 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
     }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>, [undefined]>;
     vview: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
         id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-        displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        }, {
-            setRefName(newRefName: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        displayedRegions: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[]>, [undefined]>;
         bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
         offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
         interRegionPaddingWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
         minimumBlockWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
     }, {
-        features: import("@jbrowse/core/util").Feature[] | undefined;
+        features: undefined | import("@jbrowse/core/util").Feature[];
         volatileWidth: number;
     } & {
         setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
@@ -147,12 +120,7 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         readonly displayedRegionsTotalPx: number;
         readonly maxOffset: number;
         readonly minOffset: number;
-        readonly totalBp: number; /**
-         * #stateModel DotplotView
-         * #category view
-         * extends
-         * - [BaseViewModel](../baseviewmodel)
-         */
+        readonly totalBp: number;
     } & {
         readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
         readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
@@ -161,34 +129,30 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         pxToBp(px: number): {
             coord: number;
             index: number;
-            refName: string; /**
-             * #property
-             */
+            refName: string;
             oob: boolean;
             assemblyName: string;
             offset: number;
             start: number;
             end: number;
-            reversed: boolean;
+            reversed?: boolean;
         };
         bpToPx({ refName, coord, regionNumber, }: {
             refName: string;
             coord: number;
-            regionNumber?: number | undefined;
+            regionNumber?: number;
         }): number | undefined;
     } & {
         setFeatures(features: import("@jbrowse/core/util").Feature[]): void;
         showAllRegions(): void;
-        zoomOut(): void; /**
-         * #property
-         */
+        zoomOut(): void;
         zoomIn(): void;
-        zoomTo(bpPerPx: number, offset?: number | undefined): number;
+        zoomTo(bpPerPx: number, offset?: number): number;
         scrollTo(offsetPx: number): number;
         centerAt(coord: number, refName: string | undefined, regionNumber: number): void;
         scroll(distance: number): number;
     } & {
-        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined): void;
+        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset): void;
     } & {
         setScaleFactor(n: number): void;
         center(): void;
@@ -217,13 +181,15 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         readonly canConfigure: boolean | ({
             [x: string]: any;
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-            setSubschema(slotName: string, data: unknown): any;
+            setSubschema(slotName: string, data: Record<string, unknown>): Record<string, unknown> | ({
+                [x: string]: any;
+            } & import("mobx-state-tree/dist/internal").NonEmptyObject & any & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>);
         } & import("mobx-state-tree").IStateTreeNode<import("@jbrowse/core/configuration").AnyConfigurationSchemaType>) | undefined;
     } & {
         setMinimized(flag: boolean): void;
-        showDisplay(displayId: string, initialSnapshot?: {} | undefined): void;
+        showDisplay(displayId: string, initialSnapshot?: {}): void;
         hideDisplay(displayId: string): number;
-        replaceDisplay(oldId: string, newId: string, initialSnapshot?: {} | undefined): void;
+        replaceDisplay(oldId: string, newId: string, initialSnapshot?: {}): void;
     } & {
         trackMenuItems(): (import("@jbrowse/core/ui").MenuDivider | import("@jbrowse/core/ui").MenuSubHeader | import("@jbrowse/core/ui").NormalMenuItem | import("@jbrowse/core/ui").CheckboxMenuItem | import("@jbrowse/core/ui").RadioMenuItem | import("@jbrowse/core/ui").SubMenuItem | {
             type: string;
@@ -307,31 +273,13 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
      */
     readonly views: ({
         id: string;
-        displayedRegions: import("mobx-state-tree").IMSTArray<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        }, {
-            setRefName(newRefName: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>> & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        }, {
-            setRefName(newRefName: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>>;
+        displayedRegions: import("@jbrowse/core/util").Region[] & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[]>, [undefined]>>;
         bpPerPx: number;
         offsetPx: number;
         interRegionPaddingWidth: number;
         minimumBlockWidth: number;
     } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
-        features: import("@jbrowse/core/util").Feature[] | undefined;
+        features: undefined | import("@jbrowse/core/util").Feature[];
         volatileWidth: number;
     } & {
         setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
@@ -343,12 +291,7 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         readonly displayedRegionsTotalPx: number;
         readonly maxOffset: number;
         readonly minOffset: number;
-        readonly totalBp: number; /**
-         * #stateModel DotplotView
-         * #category view
-         * extends
-         * - [BaseViewModel](../baseviewmodel)
-         */
+        readonly totalBp: number;
     } & {
         readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
         readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
@@ -357,34 +300,30 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         pxToBp(px: number): {
             coord: number;
             index: number;
-            refName: string; /**
-             * #property
-             */
+            refName: string;
             oob: boolean;
             assemblyName: string;
             offset: number;
             start: number;
             end: number;
-            reversed: boolean;
+            reversed?: boolean;
         };
         bpToPx({ refName, coord, regionNumber, }: {
             refName: string;
             coord: number;
-            regionNumber?: number | undefined;
+            regionNumber?: number;
         }): number | undefined;
     } & {
         setFeatures(features: import("@jbrowse/core/util").Feature[]): void;
         showAllRegions(): void;
-        zoomOut(): void; /**
-         * #property
-         */
+        zoomOut(): void;
         zoomIn(): void;
-        zoomTo(bpPerPx: number, offset?: number | undefined): number;
+        zoomTo(bpPerPx: number, offset?: number): number;
         scrollTo(offsetPx: number): number;
         centerAt(coord: number, refName: string | undefined, regionNumber: number): void;
         scroll(distance: number): number;
     } & {
-        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined): void;
+        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset): void;
     } & {
         setScaleFactor(n: number): void;
         center(): void;
@@ -399,22 +338,13 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         readonly width: any;
     } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IModelType<{
         id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
-        displayedRegions: import("mobx-state-tree").IArrayType<import("mobx-state-tree").IModelType<{
-            refName: import("mobx-state-tree").ISimpleType<string>;
-            start: import("mobx-state-tree").ISimpleType<number>;
-            end: import("mobx-state-tree").ISimpleType<number>;
-            reversed: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<boolean>, [undefined]>;
-        } & {
-            assemblyName: import("mobx-state-tree").ISimpleType<string>;
-        }, {
-            setRefName(newRefName: string): void;
-        }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
+        displayedRegions: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").IType<import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[], import("@jbrowse/core/util").Region[]>, [undefined]>;
         bpPerPx: import("mobx-state-tree").IType<number | undefined, number, number>;
         offsetPx: import("mobx-state-tree").IType<number | undefined, number, number>;
         interRegionPaddingWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
         minimumBlockWidth: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<number>, [undefined]>;
     }, {
-        features: import("@jbrowse/core/util").Feature[] | undefined;
+        features: undefined | import("@jbrowse/core/util").Feature[];
         volatileWidth: number;
     } & {
         setDisplayedRegions(regions: import("@jbrowse/core/util").Region[]): void;
@@ -426,12 +356,7 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         readonly displayedRegionsTotalPx: number;
         readonly maxOffset: number;
         readonly minOffset: number;
-        readonly totalBp: number; /**
-         * #stateModel DotplotView
-         * #category view
-         * extends
-         * - [BaseViewModel](../baseviewmodel)
-         */
+        readonly totalBp: number;
     } & {
         readonly dynamicBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
         readonly staticBlocks: import("@jbrowse/core/util/blockTypes").BlockSet;
@@ -440,34 +365,30 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
         pxToBp(px: number): {
             coord: number;
             index: number;
-            refName: string; /**
-             * #property
-             */
+            refName: string;
             oob: boolean;
             assemblyName: string;
             offset: number;
             start: number;
             end: number;
-            reversed: boolean;
+            reversed?: boolean;
         };
         bpToPx({ refName, coord, regionNumber, }: {
             refName: string;
             coord: number;
-            regionNumber?: number | undefined;
+            regionNumber?: number;
         }): number | undefined;
     } & {
         setFeatures(features: import("@jbrowse/core/util").Feature[]): void;
         showAllRegions(): void;
-        zoomOut(): void; /**
-         * #property
-         */
+        zoomOut(): void;
         zoomIn(): void;
-        zoomTo(bpPerPx: number, offset?: number | undefined): number;
+        zoomTo(bpPerPx: number, offset?: number): number;
         scrollTo(offsetPx: number): number;
         centerAt(coord: number, refName: string | undefined, regionNumber: number): void;
         scroll(distance: number): number;
     } & {
-        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset | undefined): void;
+        moveTo(start?: import("@jbrowse/core/util/Base1DUtils").BpOffset, end?: import("@jbrowse/core/util/Base1DUtils").BpOffset): void;
     } & {
         setScaleFactor(n: number): void;
         center(): void;
@@ -571,15 +492,13 @@ export default function stateModelFactory(pm: PluginManager): import("mobx-state
     getCoords(mousedown: Coord, mouseup: Coord): {
         coord: number;
         index: number;
-        refName: string; /**
-         * #property
-         */
+        refName: string;
         oob: boolean;
         assemblyName: string;
         offset: number;
         start: number;
         end: number;
-        reversed: boolean;
+        reversed?: boolean;
     }[] | undefined;
     /**
      * #action

package/dist/DotplotView/model.js

@@ -27,6 +27,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
 };
 Object.defineProperty(exports, "__esModule", { value: true });
 exports.Dotplot1DView = void 0;
+exports.default = stateModelFactory;
 const react_1 = require("react");
 const mobx_state_tree_1 = require("mobx-state-tree");
 const file_saver_1 = require("file-saver");
@@ -657,6 +658,5 @@ function stateModelFactory(pm) {
         },
     }));
 }
-exports.default = stateModelFactory;
 var _1dview_2 = require("./1dview");
 Object.defineProperty(exports, "Dotplot1DView", { enumerable: true, get: function () { return _1dview_2.Dotplot1DView; } });

package/dist/DotplotView/svgcomponents/SVGBackground.js

@@ -3,6 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
+exports.default = SVGBackground;
 const react_1 = __importDefault(require("react"));
 const material_1 = require("@mui/material");
 const util_1 = require("@jbrowse/core/util");
@@ -10,4 +11,3 @@ function SVGBackground({ width, height, }) {
     const theme = (0, material_1.useTheme)();
     return (react_1.default.createElement("rect", { x: 0, y: 0, width: width, height: height, fill: (0, util_1.stripAlpha)(theme.palette.background.default) }));
 }
-exports.default = SVGBackground;

package/dist/DotplotView/svgcomponents/SVGDotplotView.js

@@ -3,7 +3,7 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
     return (mod && mod.__esModule) ? mod : { "default": mod };
 };
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.renderToSvg = void 0;
+exports.renderToSvg = renderToSvg;
 const react_1 = __importDefault(require("react"));
 const mobx_1 = require("mobx");
 const util_1 = require("@jbrowse/core/util");
@@ -45,4 +45,3 @@ async function renderToSvg(model, opts) {
                 react_1.default.createElement("g", { transform: `translate(${borderX} ${viewHeight})` },
                     react_1.default.createElement(Axes_1.HorizontalAxisRaw, { model: model }))))), createRootFn);
 }
-exports.renderToSvg = renderToSvg;

package/dist/LaunchDotplotView.js

@@ -1,5 +1,6 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
+exports.default = LaunchDotplotView;
 const mobx_1 = require("mobx");
 function LaunchDotplotView(pluginManager) {
     pluginManager.addToExtensionPoint('LaunchView-DotplotView', 
@@ -28,7 +29,6 @@ function LaunchDotplotView(pluginManager) {
         }
     });
 }
-exports.default = LaunchDotplotView;
 function tryTrack(model, trackId, idsNotFound) {
     try {
         model.showTrack(trackId);

package/dist/util.js

@@ -1,8 +1,7 @@
 "use strict";
 Object.defineProperty(exports, "__esModule", { value: true });
-exports.getTag = void 0;
+exports.getTag = getTag;
 function getTag(f, tag) {
     const tags = f.get('tags');
     return tags ? tags[tag] : f.get(tag);
 }
-exports.getTag = getTag;

package/esm/DotplotDisplay/stateModelFactory.d.ts

@@ -33,9 +33,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
             rendererTypeName: string;
             error: unknown;
-            message: string | undefined; /**
-             * #property
-             */
+            message: string | undefined;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
             id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
@@ -45,14 +43,12 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
             error: unknown;
             message: string | undefined;
         }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>>;
-        onHorizontalScroll?: Function | undefined;
-        blockState?: Record<string, any> | undefined;
+        onHorizontalScroll?: Function;
+        blockState?: Record<string, any>;
     }>;
     readonly DisplayBlurb: React.FC<{
         model: {
-            id: string; /**
-             * #getter
-             */
+            id: string;
             type: string;
             rpcDriverName: string | undefined;
         } & import("mobx-state-tree/dist/internal").NonEmptyObject & {
@@ -60,7 +56,9 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
             error: unknown;
             message: string | undefined;
         } & import("mobx-state-tree").IStateTreeNode<import("mobx-state-tree").IModelType<{
-            id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
+            id: import("mobx-state-tree" /**
+             * #method
+             */).IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
             type: import("mobx-state-tree").ISimpleType<string>;
             rpcDriverName: import("mobx-state-tree").IMaybe<import("mobx-state-tree").ISimpleType<string>>;
         }, {
@@ -73,12 +71,12 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
     readonly parentTrack: any;
     renderProps(): any;
     readonly rendererType: import("@jbrowse/core/pluggableElementTypes").RendererType;
-    readonly DisplayMessageComponent: React.FC<any> | undefined;
+    readonly DisplayMessageComponent: undefined | React.FC<any>;
     trackMenuItems(): import("@jbrowse/core/ui").MenuItem[];
     readonly viewMenuActions: import("@jbrowse/core/ui").MenuItem[];
     regionCannotBeRendered(): null;
 } & {
-    setMessage(arg?: string | undefined): void;
+    setMessage(arg?: string): void;
     setError(error?: unknown): void;
     setRpcDriverName(rpcDriverName: string): void;
     reload(): void;
@@ -90,7 +88,7 @@ export declare function stateModelFactory(configSchema: AnyConfigurationSchemaTy
     renderInProgress: AbortController | undefined;
     filled: boolean;
     data: any;
-    reactElement: React.ReactElement<any, string | React.JSXElementConstructor<any>> | undefined;
+    reactElement: React.ReactElement | undefined;
     message: string | undefined;
     renderingComponent: any;
     ReactComponent2: React.FC<any>;

package/esm/DotplotRenderer/DotplotRenderer.d.ts

@@ -1,4 +1,3 @@
-/// <reference types="react" />
 import { AnyConfigurationModel } from '@jbrowse/core/configuration';
 import { Region } from '@jbrowse/core/util';
 import ComparativeRenderer, { RenderArgsDeserialized, RenderArgs } from '@jbrowse/core/pluggableElementTypes/renderers/ComparativeServerSideRendererType';
@@ -43,8 +42,8 @@ export default class DotplotRenderer extends ComparativeRenderer {
         bpPerPxX: number;
         bpPerPxY: number;
         canvasRecordedData: any;
-        reactElement?: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>> | undefined;
-        html?: string | undefined;
+        reactElement?: import("react").ReactElement;
+        html?: string;
     } | {
         height: number;
         width: number;
@@ -53,7 +52,7 @@ export default class DotplotRenderer extends ComparativeRenderer {
         bpPerPxX: number;
         bpPerPxY: number;
         reactElement: import("react").JSX.Element;
-        html?: string | undefined;
+        html?: string;
     } | {
         height: number;
         width: number;
@@ -62,8 +61,8 @@ export default class DotplotRenderer extends ComparativeRenderer {
         bpPerPxX: number;
         bpPerPxY: number;
         imageData: any;
-        reactElement?: import("react").ReactElement<any, string | import("react").JSXElementConstructor<any>> | undefined;
-        html?: string | undefined;
+        reactElement?: import("react").ReactElement;
+        html?: string;
     }>;
 }
 export {};