@jbrowse/plugin-data-management 3.7.0 → 4.0.1
This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
- package/esm/AddConnectionWidget/components/AddConnectionWidget.d.ts +1 -1
- package/esm/AddConnectionWidget/components/AddConnectionWidget.js +5 -5
- package/esm/AddConnectionWidget/components/ConfigureConnection.js +1 -1
- package/esm/AddConnectionWidget/index.js +2 -2
- package/esm/AddConnectionWidget/model.d.ts +4 -4
- package/esm/AddConnectionWidget/model.js +1 -1
- package/esm/AddTrackWidget/components/AddTrackStatusMessage.js +2 -2
- package/esm/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.d.ts +1 -1
- package/esm/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.js +2 -2
- package/esm/AddTrackWidget/components/AddTrackWidget.d.ts +1 -1
- package/esm/AddTrackWidget/components/AddTrackWidget.js +3 -3
- package/esm/AddTrackWidget/components/ConfirmTrack.d.ts +1 -1
- package/esm/AddTrackWidget/components/ConfirmTrack.js +10 -10
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +1 -1
- package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js +6 -9
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.d.ts +2 -2
- package/esm/AddTrackWidget/components/PasteConfigWorkflow.js +2 -2
- package/esm/AddTrackWidget/components/TextIndexingConfig.d.ts +1 -1
- package/esm/AddTrackWidget/components/TextIndexingConfig.js +2 -2
- package/esm/AddTrackWidget/components/TrackAdapterSelector.d.ts +2 -2
- package/esm/AddTrackWidget/components/TrackAdapterSelector.js +4 -4
- package/esm/AddTrackWidget/components/TrackSourceSelect.d.ts +1 -1
- package/esm/AddTrackWidget/components/TrackSourceSelect.js +3 -3
- package/esm/AddTrackWidget/components/TrackTypeSelector.d.ts +1 -1
- package/esm/AddTrackWidget/components/TrackTypeSelector.js +1 -1
- package/esm/AddTrackWidget/components/Unsupported.js +1 -1
- package/esm/AddTrackWidget/components/doSubmit.d.ts +1 -1
- package/esm/AddTrackWidget/components/doSubmit.js +2 -3
- package/esm/AddTrackWidget/components/util.js +1 -2
- package/esm/AddTrackWidget/index.js +2 -2
- package/esm/AddTrackWidget/model.d.ts +8 -11
- package/esm/AddTrackWidget/model.js +10 -25
- package/esm/AssemblyManager/AssemblyAddForm.js +6 -6
- package/esm/AssemblyManager/AssemblyEditor.js +2 -2
- package/esm/AssemblyManager/AssemblyManager.js +4 -4
- package/esm/AssemblyManager/AssemblyTable.js +1 -1
- package/esm/AssemblyManager/index.d.ts +1 -1
- package/esm/AssemblyManager/index.js +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/AutoSizer.d.ts +8 -0
- package/esm/HierarchicalTrackSelectorWidget/components/AutoSizer.js +24 -0
- package/esm/HierarchicalTrackSelectorWidget/components/ClearableSearchField.d.ts +6 -0
- package/esm/HierarchicalTrackSelectorWidget/components/ClearableSearchField.js +27 -0
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js +2 -2
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +9 -9
- package/esm/HierarchicalTrackSelectorWidget/components/ShoppingCart.js +4 -5
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js +3 -3
- package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +4 -5
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.js +2 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.d.ts +2 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js +5 -6
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.js +39 -58
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js +2 -2
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js +6 -12
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +7 -7
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/computeInitialWidths.d.ts +6 -0
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/computeInitialWidths.js +18 -0
- package/esm/HierarchicalTrackSelectorWidget/components/faceted/util.js +1 -2
- package/esm/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.js +3 -3
- package/esm/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.js +13 -32
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +7 -8
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +11 -22
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +2 -4
- package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js +42 -59
- package/esm/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.js +13 -29
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.d.ts +7 -6
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js +86 -92
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.d.ts +8 -4
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js +28 -15
- package/{dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.d.ts → esm/HierarchicalTrackSelectorWidget/components/tree/TrackSelectorTrackMenu.d.ts} +3 -4
- package/esm/HierarchicalTrackSelectorWidget/components/tree/{TrackLabelMenu.js → TrackSelectorTrackMenu.js} +13 -7
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TreeItem.d.ts +9 -0
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TreeItem.js +49 -0
- package/esm/HierarchicalTrackSelectorWidget/components/tree/trackListStyles.d.ts +21 -0
- package/esm/HierarchicalTrackSelectorWidget/components/tree/trackListStyles.js +29 -0
- package/esm/HierarchicalTrackSelectorWidget/components/util.d.ts +1 -20
- package/esm/HierarchicalTrackSelectorWidget/components/util.js +1 -10
- package/esm/HierarchicalTrackSelectorWidget/configSchema.d.ts +1 -1
- package/esm/HierarchicalTrackSelectorWidget/facetedModel.d.ts +24 -30
- package/esm/HierarchicalTrackSelectorWidget/facetedModel.js +34 -23
- package/esm/HierarchicalTrackSelectorWidget/facetedUtil.js +2 -2
- package/esm/HierarchicalTrackSelectorWidget/filterTracks.d.ts +3 -7
- package/esm/HierarchicalTrackSelectorWidget/filterTracks.js +13 -11
- package/esm/HierarchicalTrackSelectorWidget/generateHierarchy.d.ts +2 -28
- package/esm/HierarchicalTrackSelectorWidget/generateHierarchy.js +34 -59
- package/esm/HierarchicalTrackSelectorWidget/index.d.ts +2 -2
- package/esm/HierarchicalTrackSelectorWidget/index.js +5 -5
- package/esm/HierarchicalTrackSelectorWidget/model.d.ts +67 -87
- package/esm/HierarchicalTrackSelectorWidget/model.js +90 -23
- package/esm/HierarchicalTrackSelectorWidget/sortUtils.d.ts +2 -0
- package/esm/HierarchicalTrackSelectorWidget/sortUtils.js +28 -0
- package/esm/HierarchicalTrackSelectorWidget/types.d.ts +23 -0
- package/esm/HierarchicalTrackSelectorWidget/types.js +1 -0
- package/esm/HierarchicalTrackSelectorWidget/util.js +1 -1
- package/esm/JB2TrackHubConnection/configSchema.d.ts +3 -3
- package/esm/JB2TrackHubConnection/doConnect.js +3 -4
- package/esm/JB2TrackHubConnection/index.js +2 -2
- package/esm/JB2TrackHubConnection/model.d.ts +18 -26
- package/esm/JB2TrackHubConnection/model.js +3 -3
- package/esm/PluginStoreWidget/components/AddCustomPluginDialog.d.ts +1 -1
- package/esm/PluginStoreWidget/components/AddCustomPluginDialog.js +3 -3
- package/esm/PluginStoreWidget/components/InstalledPlugin.d.ts +1 -1
- package/esm/PluginStoreWidget/components/InstalledPlugin.js +5 -5
- package/esm/PluginStoreWidget/components/InstalledPluginsList.d.ts +1 -1
- package/esm/PluginStoreWidget/components/InstalledPluginsList.js +2 -2
- package/esm/PluginStoreWidget/components/PluginCard.d.ts +1 -1
- package/esm/PluginStoreWidget/components/PluginCard.js +1 -5
- package/esm/PluginStoreWidget/components/PluginStoreWidget.d.ts +1 -1
- package/esm/PluginStoreWidget/components/PluginStoreWidget.js +22 -10
- package/esm/PluginStoreWidget/components/util.js +1 -1
- package/esm/PluginStoreWidget/index.js +2 -2
- package/esm/PluginStoreWidget/model.d.ts +7 -7
- package/esm/PluginStoreWidget/model.js +1 -1
- package/esm/UCSCTrackHubConnection/configSchema.d.ts +3 -3
- package/esm/UCSCTrackHubConnection/doConnect.js +3 -9
- package/esm/UCSCTrackHubConnection/index.js +2 -2
- package/esm/UCSCTrackHubConnection/model.d.ts +18 -26
- package/esm/UCSCTrackHubConnection/model.js +3 -3
- package/esm/UCSCTrackHubConnection/ucscTrackHub.d.ts +1 -8
- package/esm/UCSCTrackHubConnection/ucscTrackHub.js +6 -10
- package/esm/index.d.ts +2 -2
- package/esm/index.js +11 -14
- package/package.json +28 -37
- package/dist/AddConnectionWidget/components/AddConnectionWidget.d.ts +0 -4
- package/dist/AddConnectionWidget/components/AddConnectionWidget.js +0 -66
- package/dist/AddConnectionWidget/components/ConfigureConnection.d.ts +0 -9
- package/dist/AddConnectionWidget/components/ConfigureConnection.js +0 -12
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.d.ts +0 -7
- package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +0 -19
- package/dist/AddConnectionWidget/index.d.ts +0 -2
- package/dist/AddConnectionWidget/index.js +0 -55
- package/dist/AddConnectionWidget/model.d.ts +0 -5
- package/dist/AddConnectionWidget/model.js +0 -8
- package/dist/AddTrackWidget/components/AddTrackStatusMessage.d.ts +0 -9
- package/dist/AddTrackWidget/components/AddTrackStatusMessage.js +0 -16
- package/dist/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.d.ts +0 -4
- package/dist/AddTrackWidget/components/AddTrackUnknownAdapterPrompt.js +0 -20
- package/dist/AddTrackWidget/components/AddTrackWidget.d.ts +0 -5
- package/dist/AddTrackWidget/components/AddTrackWidget.js +0 -28
- package/dist/AddTrackWidget/components/ConfirmTrack.d.ts +0 -5
- package/dist/AddTrackWidget/components/ConfirmTrack.js +0 -73
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.d.ts +0 -5
- package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js +0 -74
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.d.ts +0 -5
- package/dist/AddTrackWidget/components/PasteConfigWorkflow.js +0 -53
- package/dist/AddTrackWidget/components/TextIndexingConfig.d.ts +0 -5
- package/dist/AddTrackWidget/components/TextIndexingConfig.js +0 -76
- package/dist/AddTrackWidget/components/TrackAdapterSelector.d.ts +0 -5
- package/dist/AddTrackWidget/components/TrackAdapterSelector.js +0 -26
- package/dist/AddTrackWidget/components/TrackSourceSelect.d.ts +0 -5
- package/dist/AddTrackWidget/components/TrackSourceSelect.js +0 -22
- package/dist/AddTrackWidget/components/TrackTypeSelector.d.ts +0 -5
- package/dist/AddTrackWidget/components/TrackTypeSelector.js +0 -21
- package/dist/AddTrackWidget/components/Unsupported.d.ts +0 -1
- package/dist/AddTrackWidget/components/Unsupported.js +0 -16
- package/dist/AddTrackWidget/components/doSubmit.d.ts +0 -4
- package/dist/AddTrackWidget/components/doSubmit.js +0 -55
- package/dist/AddTrackWidget/components/util.d.ts +0 -2
- package/dist/AddTrackWidget/components/util.js +0 -15
- package/dist/AddTrackWidget/index.d.ts +0 -2
- package/dist/AddTrackWidget/index.js +0 -55
- package/dist/AddTrackWidget/model.d.ts +0 -64
- package/dist/AddTrackWidget/model.js +0 -190
- package/dist/AssemblyManager/AssemblyAddForm.d.ts +0 -6
- package/dist/AssemblyManager/AssemblyAddForm.js +0 -94
- package/dist/AssemblyManager/AssemblyEditor.d.ts +0 -6
- package/dist/AssemblyManager/AssemblyEditor.js +0 -20
- package/dist/AssemblyManager/AssemblyManager.d.ts +0 -6
- package/dist/AssemblyManager/AssemblyManager.js +0 -30
- package/dist/AssemblyManager/AssemblyTable.d.ts +0 -9
- package/dist/AssemblyManager/AssemblyTable.js +0 -53
- package/dist/AssemblyManager/index.d.ts +0 -1
- package/dist/AssemblyManager/index.js +0 -8
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.d.ts +0 -5
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js +0 -47
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.d.ts +0 -10
- package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +0 -26
- package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.d.ts +0 -8
- package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.js +0 -52
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.d.ts +0 -9
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +0 -16
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.d.ts +0 -11
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js +0 -17
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.d.ts +0 -8
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js +0 -34
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.d.ts +0 -8
- package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +0 -47
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.d.ts +0 -9
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilter.js +0 -52
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.d.ts +0 -10
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js +0 -51
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.d.ts +0 -9
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDataGrid.js +0 -75
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.d.ts +0 -6
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js +0 -15
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.d.ts +0 -4
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js +0 -67
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.d.ts +0 -11
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +0 -75
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/util.d.ts +0 -6
- package/dist/HierarchicalTrackSelectorWidget/components/faceted/util.js +0 -9
- package/dist/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.d.ts +0 -11
- package/dist/HierarchicalTrackSelectorWidget/components/tree/DropdownTrackSelector.js +0 -34
- package/dist/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.d.ts +0 -5
- package/dist/HierarchicalTrackSelectorWidget/components/tree/FavoriteTracks.js +0 -45
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.d.ts +0 -5
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +0 -196
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.d.ts +0 -6
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +0 -38
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +0 -8
- package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js +0 -68
- package/dist/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.d.ts +0 -5
- package/dist/HierarchicalTrackSelectorWidget/components/tree/RecentlyUsedTracks.js +0 -42
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.d.ts +0 -6
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js +0 -117
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.d.ts +0 -10
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js +0 -49
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.js +0 -56
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.d.ts +0 -9
- package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js +0 -42
- package/dist/HierarchicalTrackSelectorWidget/components/util.d.ts +0 -23
- package/dist/HierarchicalTrackSelectorWidget/components/util.js +0 -22
- package/dist/HierarchicalTrackSelectorWidget/configSchema.d.ts +0 -2
- package/dist/HierarchicalTrackSelectorWidget/configSchema.js +0 -5
- package/dist/HierarchicalTrackSelectorWidget/facetedModel.d.ts +0 -82
- package/dist/HierarchicalTrackSelectorWidget/facetedModel.js +0 -114
- package/dist/HierarchicalTrackSelectorWidget/facetedUtil.d.ts +0 -2
- package/dist/HierarchicalTrackSelectorWidget/facetedUtil.js +0 -12
- package/dist/HierarchicalTrackSelectorWidget/filterTracks.d.ts +0 -18
- package/dist/HierarchicalTrackSelectorWidget/filterTracks.js +0 -31
- package/dist/HierarchicalTrackSelectorWidget/generateHierarchy.d.ts +0 -36
- package/dist/HierarchicalTrackSelectorWidget/generateHierarchy.js +0 -90
- package/dist/HierarchicalTrackSelectorWidget/index.d.ts +0 -4
- package/dist/HierarchicalTrackSelectorWidget/index.js +0 -59
- package/dist/HierarchicalTrackSelectorWidget/model.d.ts +0 -244
- package/dist/HierarchicalTrackSelectorWidget/model.js +0 -339
- package/dist/HierarchicalTrackSelectorWidget/util.d.ts +0 -12
- package/dist/HierarchicalTrackSelectorWidget/util.js +0 -50
- package/dist/JB2TrackHubConnection/addRelativeUris.d.ts +0 -1
- package/dist/JB2TrackHubConnection/addRelativeUris.js +0 -15
- package/dist/JB2TrackHubConnection/configSchema.d.ts +0 -27
- package/dist/JB2TrackHubConnection/configSchema.js +0 -34
- package/dist/JB2TrackHubConnection/doConnect.d.ts +0 -5
- package/dist/JB2TrackHubConnection/doConnect.js +0 -34
- package/dist/JB2TrackHubConnection/index.d.ts +0 -2
- package/dist/JB2TrackHubConnection/index.js +0 -21
- package/dist/JB2TrackHubConnection/model.d.ts +0 -75
- package/dist/JB2TrackHubConnection/model.js +0 -56
- package/dist/JB2TrackHubConnection/util.d.ts +0 -22
- package/dist/JB2TrackHubConnection/util.js +0 -41
- package/dist/PluginStoreWidget/components/AddCustomPluginDialog.d.ts +0 -6
- package/dist/PluginStoreWidget/components/AddCustomPluginDialog.js +0 -65
- package/dist/PluginStoreWidget/components/DeletePluginDialog.d.ts +0 -4
- package/dist/PluginStoreWidget/components/DeletePluginDialog.js +0 -17
- package/dist/PluginStoreWidget/components/InstalledPlugin.d.ts +0 -7
- package/dist/PluginStoreWidget/components/InstalledPlugin.js +0 -92
- package/dist/PluginStoreWidget/components/InstalledPluginsList.d.ts +0 -7
- package/dist/PluginStoreWidget/components/InstalledPluginsList.js +0 -18
- package/dist/PluginStoreWidget/components/PluginCard.d.ts +0 -7
- package/dist/PluginStoreWidget/components/PluginCard.js +0 -58
- package/dist/PluginStoreWidget/components/PluginStoreWidget.d.ts +0 -5
- package/dist/PluginStoreWidget/components/PluginStoreWidget.js +0 -104
- package/dist/PluginStoreWidget/components/util.d.ts +0 -6
- package/dist/PluginStoreWidget/components/util.js +0 -35
- package/dist/PluginStoreWidget/index.d.ts +0 -2
- package/dist/PluginStoreWidget/index.js +0 -55
- package/dist/PluginStoreWidget/model.d.ts +0 -13
- package/dist/PluginStoreWidget/model.js +0 -22
- package/dist/UCSCTrackHubConnection/configSchema.d.ts +0 -27
- package/dist/UCSCTrackHubConnection/configSchema.js +0 -34
- package/dist/UCSCTrackHubConnection/doConnect.d.ts +0 -5
- package/dist/UCSCTrackHubConnection/doConnect.js +0 -152
- package/dist/UCSCTrackHubConnection/index.d.ts +0 -2
- package/dist/UCSCTrackHubConnection/index.js +0 -21
- package/dist/UCSCTrackHubConnection/model.d.ts +0 -75
- package/dist/UCSCTrackHubConnection/model.js +0 -56
- package/dist/UCSCTrackHubConnection/ucscAssemblies.d.ts +0 -2
- package/dist/UCSCTrackHubConnection/ucscAssemblies.js +0 -199
- package/dist/UCSCTrackHubConnection/ucscTrackHub.d.ts +0 -182
- package/dist/UCSCTrackHubConnection/ucscTrackHub.js +0 -162
- package/dist/UCSCTrackHubConnection/util.d.ts +0 -22
- package/dist/UCSCTrackHubConnection/util.js +0 -41
- package/dist/index.d.ts +0 -20
- package/dist/index.js +0 -68
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabelMenu.d.ts +0 -11
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.d.ts +0 -9
- package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js +0 -36
|
@@ -1,11 +0,0 @@
|
|
|
1
|
-
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
2
|
-
import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
3
|
-
export interface InfoArgs {
|
|
4
|
-
target: HTMLElement;
|
|
5
|
-
id: string;
|
|
6
|
-
conf: AnyConfigurationModel;
|
|
7
|
-
}
|
|
8
|
-
declare const FacetedSelector: ({ model, }: {
|
|
9
|
-
model: HierarchicalTrackSelectorModel;
|
|
10
|
-
}) => import("react/jsx-runtime").JSX.Element;
|
|
11
|
-
export default FacetedSelector;
|
|
@@ -1,75 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
7
|
-
const ui_1 = require("@jbrowse/core/ui");
|
|
8
|
-
const SanitizedHTML_1 = __importDefault(require("@jbrowse/core/ui/SanitizedHTML"));
|
|
9
|
-
const mobx_react_1 = require("mobx-react");
|
|
10
|
-
const mui_1 = require("tss-react/mui");
|
|
11
|
-
const FacetFilters_1 = __importDefault(require("./FacetFilters"));
|
|
12
|
-
const FacetedDataGrid_1 = __importDefault(require("./FacetedDataGrid"));
|
|
13
|
-
const FacetedHeader_1 = __importDefault(require("./FacetedHeader"));
|
|
14
|
-
const TrackLabelMenu_1 = __importDefault(require("../tree/TrackLabelMenu"));
|
|
15
|
-
const useStyles = (0, mui_1.makeStyles)()({
|
|
16
|
-
cell: {
|
|
17
|
-
whiteSpace: 'nowrap',
|
|
18
|
-
overflow: 'hidden',
|
|
19
|
-
textOverflow: 'ellipsis',
|
|
20
|
-
},
|
|
21
|
-
resizeHandle: {
|
|
22
|
-
marginLeft: 5,
|
|
23
|
-
background: 'grey',
|
|
24
|
-
width: 5,
|
|
25
|
-
},
|
|
26
|
-
});
|
|
27
|
-
const frac = 0.75;
|
|
28
|
-
const FacetedSelector = (0, mobx_react_1.observer)(function FacetedSelector({ model, }) {
|
|
29
|
-
const { classes } = useStyles();
|
|
30
|
-
const { selection, shownTrackIds, faceted } = model;
|
|
31
|
-
const { rows, panelWidth, showFilters, filteredNonMetadataKeys, filteredMetadataKeys, } = faceted;
|
|
32
|
-
const columns = [
|
|
33
|
-
{
|
|
34
|
-
field: 'name',
|
|
35
|
-
hideable: false,
|
|
36
|
-
renderCell: params => {
|
|
37
|
-
const { value, row } = params;
|
|
38
|
-
const { id, conf } = row;
|
|
39
|
-
return ((0, jsx_runtime_1.jsxs)("div", { className: classes.cell, children: [(0, jsx_runtime_1.jsx)(SanitizedHTML_1.default, { html: value }), (0, jsx_runtime_1.jsx)(TrackLabelMenu_1.default, { id: id, conf: conf, trackId: id, model: model })] }));
|
|
40
|
-
},
|
|
41
|
-
},
|
|
42
|
-
...filteredNonMetadataKeys.map(e => {
|
|
43
|
-
return {
|
|
44
|
-
field: e,
|
|
45
|
-
renderCell: params => {
|
|
46
|
-
const val = params.value;
|
|
47
|
-
return val ? ((0, jsx_runtime_1.jsx)(SanitizedHTML_1.default, { className: classes.cell, html: val })) : ('');
|
|
48
|
-
},
|
|
49
|
-
};
|
|
50
|
-
}),
|
|
51
|
-
...filteredMetadataKeys.map(e => {
|
|
52
|
-
return {
|
|
53
|
-
field: `metadata.${e}`,
|
|
54
|
-
headerName: ['name', ...filteredNonMetadataKeys].includes(e)
|
|
55
|
-
? `${e} (from metadata)`
|
|
56
|
-
: e,
|
|
57
|
-
valueGetter: (_, row) => { var _a; return `${(_a = row.metadata[e]) !== null && _a !== void 0 ? _a : ''}`; },
|
|
58
|
-
renderCell: params => {
|
|
59
|
-
const val = params.value;
|
|
60
|
-
return val ? ((0, jsx_runtime_1.jsx)(SanitizedHTML_1.default, { className: classes.cell, html: val })) : ('');
|
|
61
|
-
},
|
|
62
|
-
};
|
|
63
|
-
}),
|
|
64
|
-
];
|
|
65
|
-
return ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsx)(FacetedHeader_1.default, { model: model }), (0, jsx_runtime_1.jsxs)("div", { style: {
|
|
66
|
-
display: 'flex',
|
|
67
|
-
overflow: 'hidden',
|
|
68
|
-
height: window.innerHeight * frac,
|
|
69
|
-
width: window.innerWidth * frac,
|
|
70
|
-
}, children: [(0, jsx_runtime_1.jsx)("div", { style: {
|
|
71
|
-
height: window.innerHeight * frac,
|
|
72
|
-
width: window.innerWidth * frac - (showFilters ? panelWidth : 0),
|
|
73
|
-
}, children: (0, jsx_runtime_1.jsx)(FacetedDataGrid_1.default, { model: model, columns: columns, shownTrackIds: shownTrackIds, selection: selection }) }), showFilters ? ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsx)(ui_1.ResizeHandle, { vertical: true, onDrag: dist => faceted.setPanelWidth(panelWidth - dist), className: classes.resizeHandle }), (0, jsx_runtime_1.jsx)("div", { style: { width: panelWidth, overflow: 'auto' }, children: (0, jsx_runtime_1.jsx)(FacetFilters_1.default, { model: model, rows: rows, columns: columns }) })] })) : null] })] }));
|
|
74
|
-
});
|
|
75
|
-
exports.default = FacetedSelector;
|
|
@@ -1,9 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
3
|
-
exports.getRowStr = getRowStr;
|
|
4
|
-
function getRowStr(facet, row) {
|
|
5
|
-
var _a;
|
|
6
|
-
return `${(facet.startsWith('metadata.')
|
|
7
|
-
? (_a = row.metadata) === null || _a === void 0 ? void 0 : _a[facet.replace('metadata.', '')]
|
|
8
|
-
: row[facet]) || ''}`;
|
|
9
|
-
}
|
|
@@ -1,11 +0,0 @@
|
|
|
1
|
-
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
2
|
-
import type { AnyConfigurationModel } from '@jbrowse/core/configuration';
|
|
3
|
-
import type { MenuItem } from '@jbrowse/core/ui/Menu';
|
|
4
|
-
declare const DropdownTrackSelector: ({ model, tracks, extraMenuItems, children, onClick, }: {
|
|
5
|
-
model: HierarchicalTrackSelectorModel;
|
|
6
|
-
tracks: AnyConfigurationModel[];
|
|
7
|
-
extraMenuItems: MenuItem[];
|
|
8
|
-
onClick?: () => void;
|
|
9
|
-
children: React.ReactElement;
|
|
10
|
-
}) => import("react/jsx-runtime").JSX.Element | null;
|
|
11
|
-
export default DropdownTrackSelector;
|
|
@@ -1,34 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
7
|
-
const react_1 = require("react");
|
|
8
|
-
const CascadingMenuButton_1 = __importDefault(require("@jbrowse/core/ui/CascadingMenuButton"));
|
|
9
|
-
const SanitizedHTML_1 = __importDefault(require("@jbrowse/core/ui/SanitizedHTML"));
|
|
10
|
-
const util_1 = require("@jbrowse/core/util");
|
|
11
|
-
const tracks_1 = require("@jbrowse/core/util/tracks");
|
|
12
|
-
const mobx_react_1 = require("mobx-react");
|
|
13
|
-
const TrackLabelMenu_1 = __importDefault(require("./TrackLabelMenu"));
|
|
14
|
-
const DropdownTrackSelector = (0, mobx_react_1.observer)(function ({ model, tracks, extraMenuItems, children, onClick, }) {
|
|
15
|
-
const { view } = model;
|
|
16
|
-
const [open, setOpen] = (0, react_1.useState)(false);
|
|
17
|
-
const session = (0, util_1.getSession)(model);
|
|
18
|
-
return view ? ((0, jsx_runtime_1.jsx)(CascadingMenuButton_1.default, { closeAfterItemClick: false, onClick: onClick, menuItems: [
|
|
19
|
-
...tracks.map(t => ({
|
|
20
|
-
type: 'checkbox',
|
|
21
|
-
label: ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsx)(SanitizedHTML_1.default, { html: (0, tracks_1.getTrackName)(t, session) }), ' ', (0, jsx_runtime_1.jsx)(TrackLabelMenu_1.default, { id: t.trackId, trackId: t.trackId, model: model, conf: t, setOpen: setOpen, stopPropagation: true })] })),
|
|
22
|
-
checked: view.tracks.some((f) => f.configuration === t),
|
|
23
|
-
onClick: () => {
|
|
24
|
-
if (!open) {
|
|
25
|
-
if (model.view.toggleTrack(t.trackId)) {
|
|
26
|
-
model.addToRecentlyUsed(t.trackId);
|
|
27
|
-
}
|
|
28
|
-
}
|
|
29
|
-
},
|
|
30
|
-
})),
|
|
31
|
-
...extraMenuItems,
|
|
32
|
-
], children: children })) : null;
|
|
33
|
-
});
|
|
34
|
-
exports.default = DropdownTrackSelector;
|
|
@@ -1,45 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
7
|
-
const Grade_1 = __importDefault(require("@mui/icons-material/Grade"));
|
|
8
|
-
const material_1 = require("@mui/material");
|
|
9
|
-
const mobx_react_1 = require("mobx-react");
|
|
10
|
-
const mui_1 = require("tss-react/mui");
|
|
11
|
-
const DropdownTrackSelector_1 = __importDefault(require("./DropdownTrackSelector"));
|
|
12
|
-
const useStyles = (0, mui_1.makeStyles)()({
|
|
13
|
-
smallBadge: {
|
|
14
|
-
height: 14,
|
|
15
|
-
},
|
|
16
|
-
margin: {
|
|
17
|
-
marginRight: 10,
|
|
18
|
-
},
|
|
19
|
-
});
|
|
20
|
-
const FavoriteTracks = (0, mobx_react_1.observer)(function ({ model, }) {
|
|
21
|
-
const { classes } = useStyles();
|
|
22
|
-
const { view, favoriteTracks } = model;
|
|
23
|
-
return view ? ((0, jsx_runtime_1.jsx)(DropdownTrackSelector_1.default, { onClick: () => {
|
|
24
|
-
model.setFavoritesCounter(0);
|
|
25
|
-
}, tracks: favoriteTracks, model: model, extraMenuItems: favoriteTracks.length
|
|
26
|
-
? [
|
|
27
|
-
{ type: 'divider' },
|
|
28
|
-
{
|
|
29
|
-
label: 'Clear favorites',
|
|
30
|
-
onClick: () => {
|
|
31
|
-
model.clearFavorites();
|
|
32
|
-
},
|
|
33
|
-
},
|
|
34
|
-
]
|
|
35
|
-
: [
|
|
36
|
-
{
|
|
37
|
-
label: 'No favorite tracks yet',
|
|
38
|
-
onClick: () => { },
|
|
39
|
-
},
|
|
40
|
-
], children: (0, jsx_runtime_1.jsx)(material_1.Tooltip, { title: "Favorite tracks", children: (0, jsx_runtime_1.jsx)(material_1.Badge, { classes: { badge: classes.smallBadge }, color: "secondary", anchorOrigin: {
|
|
41
|
-
vertical: 'bottom',
|
|
42
|
-
horizontal: 'right',
|
|
43
|
-
}, className: classes.margin, badgeContent: model.favoritesCounter, children: (0, jsx_runtime_1.jsx)(Grade_1.default, {}) }) }) })) : null;
|
|
44
|
-
});
|
|
45
|
-
exports.default = FavoriteTracks;
|
|
@@ -1,196 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __createBinding = (this && this.__createBinding) || (Object.create ? (function(o, m, k, k2) {
|
|
3
|
-
if (k2 === undefined) k2 = k;
|
|
4
|
-
var desc = Object.getOwnPropertyDescriptor(m, k);
|
|
5
|
-
if (!desc || ("get" in desc ? !m.__esModule : desc.writable || desc.configurable)) {
|
|
6
|
-
desc = { enumerable: true, get: function() { return m[k]; } };
|
|
7
|
-
}
|
|
8
|
-
Object.defineProperty(o, k2, desc);
|
|
9
|
-
}) : (function(o, m, k, k2) {
|
|
10
|
-
if (k2 === undefined) k2 = k;
|
|
11
|
-
o[k2] = m[k];
|
|
12
|
-
}));
|
|
13
|
-
var __setModuleDefault = (this && this.__setModuleDefault) || (Object.create ? (function(o, v) {
|
|
14
|
-
Object.defineProperty(o, "default", { enumerable: true, value: v });
|
|
15
|
-
}) : function(o, v) {
|
|
16
|
-
o["default"] = v;
|
|
17
|
-
});
|
|
18
|
-
var __importStar = (this && this.__importStar) || (function () {
|
|
19
|
-
var ownKeys = function(o) {
|
|
20
|
-
ownKeys = Object.getOwnPropertyNames || function (o) {
|
|
21
|
-
var ar = [];
|
|
22
|
-
for (var k in o) if (Object.prototype.hasOwnProperty.call(o, k)) ar[ar.length] = k;
|
|
23
|
-
return ar;
|
|
24
|
-
};
|
|
25
|
-
return ownKeys(o);
|
|
26
|
-
};
|
|
27
|
-
return function (mod) {
|
|
28
|
-
if (mod && mod.__esModule) return mod;
|
|
29
|
-
var result = {};
|
|
30
|
-
if (mod != null) for (var k = ownKeys(mod), i = 0; i < k.length; i++) if (k[i] !== "default") __createBinding(result, mod, k[i]);
|
|
31
|
-
__setModuleDefault(result, mod);
|
|
32
|
-
return result;
|
|
33
|
-
};
|
|
34
|
-
})();
|
|
35
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
36
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
37
|
-
};
|
|
38
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
39
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
40
|
-
const react_1 = require("react");
|
|
41
|
-
const configuration_1 = require("@jbrowse/core/configuration");
|
|
42
|
-
const CascadingMenuButton_1 = __importDefault(require("@jbrowse/core/ui/CascadingMenuButton"));
|
|
43
|
-
const util_1 = require("@jbrowse/core/util");
|
|
44
|
-
const Menu_1 = __importDefault(require("@mui/icons-material/Menu"));
|
|
45
|
-
const mobx_react_1 = require("mobx-react");
|
|
46
|
-
const FacetedDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../faceted/FacetedDialog'))));
|
|
47
|
-
const CloseConnectionDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../dialogs/CloseConnectionDialog'))));
|
|
48
|
-
const DeleteConnectionDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../dialogs/DeleteConnectionDialog'))));
|
|
49
|
-
const ManageConnectionsDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../dialogs/ManageConnectionsDialog'))));
|
|
50
|
-
const ToggleConnectionsDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('../dialogs/ToggleConnectionsDialog'))));
|
|
51
|
-
const HamburgerMenu = (0, mobx_react_1.observer)(function ({ model, }) {
|
|
52
|
-
const session = (0, util_1.getSession)(model);
|
|
53
|
-
const [modalInfo, setModalInfo] = (0, react_1.useState)();
|
|
54
|
-
const [deleteDialogDetails, setDeleteDialogDetails] = (0, react_1.useState)();
|
|
55
|
-
const [connectionToggleOpen, setConnectionToggleOpen] = (0, react_1.useState)(false);
|
|
56
|
-
const [connectionManagerOpen, setConnectionManagerOpen] = (0, react_1.useState)(false);
|
|
57
|
-
const [facetedOpen, setFacetedOpen] = (0, react_1.useState)(false);
|
|
58
|
-
function breakConnection(connectionConf, deletingConnection) {
|
|
59
|
-
var _a;
|
|
60
|
-
const name = (0, configuration_1.readConfObject)(connectionConf, 'name');
|
|
61
|
-
const result = (_a = session.prepareToBreakConnection) === null || _a === void 0 ? void 0 : _a.call(session, connectionConf);
|
|
62
|
-
if (result) {
|
|
63
|
-
const [safelyBreakConnection, dereferenceTypeCount] = result;
|
|
64
|
-
if (Object.keys(dereferenceTypeCount).length > 0) {
|
|
65
|
-
setModalInfo({
|
|
66
|
-
connectionConf,
|
|
67
|
-
safelyBreakConnection,
|
|
68
|
-
dereferenceTypeCount,
|
|
69
|
-
name,
|
|
70
|
-
});
|
|
71
|
-
}
|
|
72
|
-
else {
|
|
73
|
-
safelyBreakConnection();
|
|
74
|
-
}
|
|
75
|
-
}
|
|
76
|
-
if (deletingConnection) {
|
|
77
|
-
setDeleteDialogDetails({ name, connectionConf });
|
|
78
|
-
}
|
|
79
|
-
}
|
|
80
|
-
return ((0, jsx_runtime_1.jsxs)(jsx_runtime_1.Fragment, { children: [(0, jsx_runtime_1.jsx)(CascadingMenuButton_1.default, { menuItems: [
|
|
81
|
-
{
|
|
82
|
-
label: 'Open faceted track selector',
|
|
83
|
-
onClick: () => {
|
|
84
|
-
setFacetedOpen(true);
|
|
85
|
-
},
|
|
86
|
-
},
|
|
87
|
-
...((0, util_1.isSessionWithAddTracks)(session)
|
|
88
|
-
? [
|
|
89
|
-
{
|
|
90
|
-
label: 'Add track...',
|
|
91
|
-
onClick: () => {
|
|
92
|
-
if ((0, util_1.isSessionModelWithWidgets)(session)) {
|
|
93
|
-
session.showWidget(session.addWidget('AddTrackWidget', 'addTrackWidget', {
|
|
94
|
-
view: model.view.id,
|
|
95
|
-
}));
|
|
96
|
-
}
|
|
97
|
-
},
|
|
98
|
-
},
|
|
99
|
-
]
|
|
100
|
-
: []),
|
|
101
|
-
{
|
|
102
|
-
label: 'Connections...',
|
|
103
|
-
subMenu: [
|
|
104
|
-
...((0, util_1.isSessionModelWithConnections)(session)
|
|
105
|
-
? [
|
|
106
|
-
{
|
|
107
|
-
label: 'Turn on/off connections...',
|
|
108
|
-
onClick: () => {
|
|
109
|
-
setConnectionToggleOpen(true);
|
|
110
|
-
},
|
|
111
|
-
},
|
|
112
|
-
]
|
|
113
|
-
: []),
|
|
114
|
-
...((0, util_1.isSessionModelWithConnectionEditing)(session)
|
|
115
|
-
? [
|
|
116
|
-
{
|
|
117
|
-
label: 'Add connection...',
|
|
118
|
-
onClick: () => {
|
|
119
|
-
if ((0, util_1.isSessionModelWithWidgets)(session)) {
|
|
120
|
-
session.showWidget(session.addWidget('AddConnectionWidget', 'addConnectionWidget'));
|
|
121
|
-
}
|
|
122
|
-
},
|
|
123
|
-
},
|
|
124
|
-
{
|
|
125
|
-
label: 'Delete connections...',
|
|
126
|
-
onClick: () => {
|
|
127
|
-
setConnectionManagerOpen(true);
|
|
128
|
-
},
|
|
129
|
-
},
|
|
130
|
-
]
|
|
131
|
-
: []),
|
|
132
|
-
],
|
|
133
|
-
},
|
|
134
|
-
{
|
|
135
|
-
label: 'Sort...',
|
|
136
|
-
type: 'subMenu',
|
|
137
|
-
subMenu: [
|
|
138
|
-
{
|
|
139
|
-
label: 'Sort tracks by name',
|
|
140
|
-
type: 'checkbox',
|
|
141
|
-
checked: model.activeSortTrackNames,
|
|
142
|
-
onClick: () => {
|
|
143
|
-
model.setSortTrackNames(!model.activeSortTrackNames);
|
|
144
|
-
},
|
|
145
|
-
},
|
|
146
|
-
{
|
|
147
|
-
label: 'Sort categories by name',
|
|
148
|
-
type: 'checkbox',
|
|
149
|
-
checked: model.activeSortCategories,
|
|
150
|
-
onClick: () => {
|
|
151
|
-
model.setSortCategories(!model.activeSortCategories);
|
|
152
|
-
},
|
|
153
|
-
},
|
|
154
|
-
],
|
|
155
|
-
},
|
|
156
|
-
{
|
|
157
|
-
label: 'Collapse...',
|
|
158
|
-
type: 'subMenu',
|
|
159
|
-
subMenu: [
|
|
160
|
-
...(model.hasAnySubcategories
|
|
161
|
-
? [
|
|
162
|
-
{
|
|
163
|
-
label: 'Collapse subcategories',
|
|
164
|
-
onClick: () => {
|
|
165
|
-
model.collapseSubCategories();
|
|
166
|
-
},
|
|
167
|
-
},
|
|
168
|
-
]
|
|
169
|
-
: []),
|
|
170
|
-
{
|
|
171
|
-
label: 'Collapse top-level categories',
|
|
172
|
-
onClick: () => {
|
|
173
|
-
model.collapseTopLevelCategories();
|
|
174
|
-
},
|
|
175
|
-
},
|
|
176
|
-
{
|
|
177
|
-
label: 'Expand all categories',
|
|
178
|
-
onClick: () => {
|
|
179
|
-
model.expandAllCategories();
|
|
180
|
-
},
|
|
181
|
-
},
|
|
182
|
-
],
|
|
183
|
-
},
|
|
184
|
-
], children: (0, jsx_runtime_1.jsx)(Menu_1.default, {}) }), (0, jsx_runtime_1.jsxs)(react_1.Suspense, { fallback: null, children: [modalInfo ? ((0, jsx_runtime_1.jsx)(CloseConnectionDialog, { modalInfo: modalInfo, onClose: () => {
|
|
185
|
-
setModalInfo(undefined);
|
|
186
|
-
} })) : null, deleteDialogDetails ? ((0, jsx_runtime_1.jsx)(DeleteConnectionDialog, { handleClose: () => {
|
|
187
|
-
setDeleteDialogDetails(undefined);
|
|
188
|
-
}, deleteDialogDetails: deleteDialogDetails, session: session })) : null, connectionManagerOpen ? ((0, jsx_runtime_1.jsx)(ManageConnectionsDialog, { handleClose: () => {
|
|
189
|
-
setConnectionManagerOpen(false);
|
|
190
|
-
}, breakConnection: breakConnection, session: session })) : null, connectionToggleOpen ? ((0, jsx_runtime_1.jsx)(ToggleConnectionsDialog, { handleClose: () => {
|
|
191
|
-
setConnectionToggleOpen(false);
|
|
192
|
-
}, session: session, breakConnection: breakConnection })) : null, facetedOpen ? ((0, jsx_runtime_1.jsx)(FacetedDialog, { handleClose: () => {
|
|
193
|
-
setFacetedOpen(false);
|
|
194
|
-
}, model: model })) : null] })] }));
|
|
195
|
-
});
|
|
196
|
-
exports.default = HamburgerMenu;
|
|
@@ -1,6 +0,0 @@
|
|
|
1
|
-
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
2
|
-
declare const HierarchicalTrackSelectorHeader: ({ model, setHeaderHeight, }: {
|
|
3
|
-
model: HierarchicalTrackSelectorModel;
|
|
4
|
-
setHeaderHeight: (n: number) => void;
|
|
5
|
-
}) => import("react/jsx-runtime").JSX.Element;
|
|
6
|
-
export default HierarchicalTrackSelectorHeader;
|
|
@@ -1,38 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
7
|
-
const Clear_1 = __importDefault(require("@mui/icons-material/Clear"));
|
|
8
|
-
const material_1 = require("@mui/material");
|
|
9
|
-
const mobx_react_1 = require("mobx-react");
|
|
10
|
-
const mui_1 = require("tss-react/mui");
|
|
11
|
-
const HamburgerMenu_1 = __importDefault(require("./HamburgerMenu"));
|
|
12
|
-
const ShoppingCart_1 = __importDefault(require("../ShoppingCart"));
|
|
13
|
-
const FavoriteTracks_1 = __importDefault(require("./FavoriteTracks"));
|
|
14
|
-
const RecentlyUsedTracks_1 = __importDefault(require("./RecentlyUsedTracks"));
|
|
15
|
-
const useStyles = (0, mui_1.makeStyles)()(theme => ({
|
|
16
|
-
searchBox: {
|
|
17
|
-
margin: theme.spacing(2),
|
|
18
|
-
},
|
|
19
|
-
}));
|
|
20
|
-
const SearchTracksTextField = (0, mobx_react_1.observer)(function ({ model, }) {
|
|
21
|
-
const { filterText } = model;
|
|
22
|
-
const { classes } = useStyles();
|
|
23
|
-
return ((0, jsx_runtime_1.jsx)(material_1.TextField, { className: classes.searchBox, label: "Filter tracks", value: filterText, onChange: event => {
|
|
24
|
-
model.setFilterText(event.target.value);
|
|
25
|
-
}, fullWidth: true, slotProps: {
|
|
26
|
-
input: {
|
|
27
|
-
endAdornment: ((0, jsx_runtime_1.jsx)(material_1.InputAdornment, { position: "end", children: (0, jsx_runtime_1.jsx)(material_1.IconButton, { onClick: () => {
|
|
28
|
-
model.clearFilterText();
|
|
29
|
-
}, children: (0, jsx_runtime_1.jsx)(Clear_1.default, {}) }) })),
|
|
30
|
-
},
|
|
31
|
-
} }));
|
|
32
|
-
});
|
|
33
|
-
const HierarchicalTrackSelectorHeader = (0, mobx_react_1.observer)(function ({ model, setHeaderHeight, }) {
|
|
34
|
-
return ((0, jsx_runtime_1.jsx)("div", { ref: ref => {
|
|
35
|
-
setHeaderHeight((ref === null || ref === void 0 ? void 0 : ref.getBoundingClientRect().height) || 0);
|
|
36
|
-
}, "data-testid": "hierarchical_track_selector", children: (0, jsx_runtime_1.jsxs)("div", { style: { display: 'flex' }, children: [(0, jsx_runtime_1.jsx)(HamburgerMenu_1.default, { model: model }), (0, jsx_runtime_1.jsx)(ShoppingCart_1.default, { model: model }), (0, jsx_runtime_1.jsx)(SearchTracksTextField, { model: model }), (0, jsx_runtime_1.jsx)(RecentlyUsedTracks_1.default, { model: model }), (0, jsx_runtime_1.jsx)(FavoriteTracks_1.default, { model: model })] }) }));
|
|
37
|
-
});
|
|
38
|
-
exports.default = HierarchicalTrackSelectorHeader;
|
|
@@ -1,8 +0,0 @@
|
|
|
1
|
-
import type { TreeNode } from '../../generateHierarchy';
|
|
2
|
-
import type { HierarchicalTrackSelectorModel } from '../../model';
|
|
3
|
-
declare const HierarchicalTree: ({ height, tree, model, }: {
|
|
4
|
-
height: number;
|
|
5
|
-
tree: TreeNode;
|
|
6
|
-
model: HierarchicalTrackSelectorModel;
|
|
7
|
-
}) => import("react/jsx-runtime").JSX.Element;
|
|
8
|
-
export default HierarchicalTree;
|
|
@@ -1,68 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
7
|
-
const react_1 = require("react");
|
|
8
|
-
const util_1 = require("@jbrowse/core/util");
|
|
9
|
-
const mobx_react_1 = require("mobx-react");
|
|
10
|
-
const react_vtree_1 = require("react-vtree");
|
|
11
|
-
const TrackListNode_1 = __importDefault(require("./TrackListNode"));
|
|
12
|
-
function getNodeData(node, nestingLevel, extra, selection) {
|
|
13
|
-
const isLeaf = node.type === 'track';
|
|
14
|
-
const selected = isLeaf ? selection[node.trackId] : false;
|
|
15
|
-
return {
|
|
16
|
-
data: {
|
|
17
|
-
defaultHeight: isLeaf ? 22 : 40,
|
|
18
|
-
isLeaf,
|
|
19
|
-
isOpenByDefault: true,
|
|
20
|
-
nestingLevel,
|
|
21
|
-
selected,
|
|
22
|
-
...node,
|
|
23
|
-
...extra,
|
|
24
|
-
},
|
|
25
|
-
nestingLevel,
|
|
26
|
-
node,
|
|
27
|
-
};
|
|
28
|
-
}
|
|
29
|
-
const HierarchicalTree = (0, mobx_react_1.observer)(function HierarchicalTree({ height, tree, model, }) {
|
|
30
|
-
const { filterText, selection, view } = model;
|
|
31
|
-
const treeRef = (0, react_1.useRef)(null);
|
|
32
|
-
const session = (0, util_1.getSession)(model);
|
|
33
|
-
const { drawerPosition } = session;
|
|
34
|
-
const obj = (0, react_1.useMemo)(() => Object.fromEntries(selection.map(s => [s.trackId, s])), [selection]);
|
|
35
|
-
const extra = (0, react_1.useMemo)(() => ({
|
|
36
|
-
onChange: (trackId) => {
|
|
37
|
-
const trackTurnedOn = view.toggleTrack(trackId);
|
|
38
|
-
if (trackTurnedOn) {
|
|
39
|
-
model.addToRecentlyUsed(trackId);
|
|
40
|
-
}
|
|
41
|
-
},
|
|
42
|
-
toggleCollapse: (pathName) => {
|
|
43
|
-
model.toggleCategory(pathName);
|
|
44
|
-
},
|
|
45
|
-
tree,
|
|
46
|
-
model,
|
|
47
|
-
drawerPosition,
|
|
48
|
-
}), [view, model, drawerPosition, tree]);
|
|
49
|
-
const treeWalker = (0, react_1.useCallback)(function* treeWalker() {
|
|
50
|
-
for (const child of tree.children) {
|
|
51
|
-
yield getNodeData(child, 0, extra, obj);
|
|
52
|
-
}
|
|
53
|
-
while (true) {
|
|
54
|
-
const parentMeta = yield;
|
|
55
|
-
for (const curr of parentMeta.node.children) {
|
|
56
|
-
yield getNodeData(curr, parentMeta.nestingLevel + 1, extra, obj);
|
|
57
|
-
}
|
|
58
|
-
}
|
|
59
|
-
}, [tree, extra, obj]);
|
|
60
|
-
(0, react_1.useEffect)(() => {
|
|
61
|
-
treeRef.current.recomputeTree({
|
|
62
|
-
refreshNodes: true,
|
|
63
|
-
useDefaultHeight: true,
|
|
64
|
-
});
|
|
65
|
-
}, [tree, filterText]);
|
|
66
|
-
return ((0, jsx_runtime_1.jsx)(jsx_runtime_1.Fragment, { children: (0, jsx_runtime_1.jsx)(react_vtree_1.VariableSizeTree, { ref: treeRef, treeWalker: treeWalker, height: height, children: TrackListNode_1.default }) }));
|
|
67
|
-
});
|
|
68
|
-
exports.default = HierarchicalTree;
|
|
@@ -1,42 +0,0 @@
|
|
|
1
|
-
"use strict";
|
|
2
|
-
var __importDefault = (this && this.__importDefault) || function (mod) {
|
|
3
|
-
return (mod && mod.__esModule) ? mod : { "default": mod };
|
|
4
|
-
};
|
|
5
|
-
Object.defineProperty(exports, "__esModule", { value: true });
|
|
6
|
-
const jsx_runtime_1 = require("react/jsx-runtime");
|
|
7
|
-
const History_1 = __importDefault(require("@mui/icons-material/History"));
|
|
8
|
-
const material_1 = require("@mui/material");
|
|
9
|
-
const mobx_react_1 = require("mobx-react");
|
|
10
|
-
const mui_1 = require("tss-react/mui");
|
|
11
|
-
const DropdownTrackSelector_1 = __importDefault(require("./DropdownTrackSelector"));
|
|
12
|
-
const useStyles = (0, mui_1.makeStyles)()({
|
|
13
|
-
smallBadge: {
|
|
14
|
-
height: 14,
|
|
15
|
-
},
|
|
16
|
-
});
|
|
17
|
-
const RecentlyUsedTracks = (0, mobx_react_1.observer)(function ({ model, }) {
|
|
18
|
-
const { classes } = useStyles();
|
|
19
|
-
const { view, recentlyUsedCounter, recentlyUsedTracks } = model;
|
|
20
|
-
return view ? ((0, jsx_runtime_1.jsx)(DropdownTrackSelector_1.default, { onClick: () => {
|
|
21
|
-
model.setRecentlyUsedCounter(0);
|
|
22
|
-
}, model: model, tracks: recentlyUsedTracks, extraMenuItems: recentlyUsedTracks.length
|
|
23
|
-
? [
|
|
24
|
-
{ type: 'divider' },
|
|
25
|
-
{
|
|
26
|
-
label: 'Clear recently used',
|
|
27
|
-
onClick: () => {
|
|
28
|
-
model.clearRecentlyUsed();
|
|
29
|
-
},
|
|
30
|
-
},
|
|
31
|
-
]
|
|
32
|
-
: [
|
|
33
|
-
{
|
|
34
|
-
label: 'No recently used',
|
|
35
|
-
onClick: () => { },
|
|
36
|
-
},
|
|
37
|
-
], children: (0, jsx_runtime_1.jsx)(material_1.Tooltip, { title: "Recently used tracks", children: (0, jsx_runtime_1.jsx)(material_1.Badge, { classes: { badge: classes.smallBadge }, anchorOrigin: {
|
|
38
|
-
vertical: 'bottom',
|
|
39
|
-
horizontal: 'right',
|
|
40
|
-
}, color: "secondary", badgeContent: recentlyUsedCounter, children: (0, jsx_runtime_1.jsx)(History_1.default, {}) }) }) })) : null;
|
|
41
|
-
});
|
|
42
|
-
exports.default = RecentlyUsedTracks;
|