@jbrowse/plugin-data-management 2.6.1 → 2.6.3

This diff represents the content of publicly available package versions that have been released to one of the supported registries. The information contained in this diff is provided for informational purposes only and reflects changes between package versions as they appear in their respective public registries.
Files changed (336) hide show
  1. package/dist/AddConnectionWidget/components/AddConnectionWidget.js +0 -1
  2. package/dist/AddConnectionWidget/components/ConfigureConnection.js +0 -1
  3. package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js +0 -1
  4. package/dist/AddConnectionWidget/index.js +0 -1
  5. package/dist/AddConnectionWidget/model.js +0 -1
  6. package/dist/AddTrackWidget/components/AddTrackWidget.js +0 -1
  7. package/dist/AddTrackWidget/components/ConfirmTrack.js +0 -1
  8. package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js +0 -1
  9. package/dist/AddTrackWidget/components/PasteConfigWorkflow.js +0 -1
  10. package/dist/AddTrackWidget/components/TextIndexingConfig.js +0 -1
  11. package/dist/AddTrackWidget/components/TrackAdapterSelector.js +0 -1
  12. package/dist/AddTrackWidget/components/TrackSourceSelect.js +0 -1
  13. package/dist/AddTrackWidget/components/TrackTypeSelector.js +0 -1
  14. package/dist/AddTrackWidget/index.js +0 -1
  15. package/dist/AddTrackWidget/model.js +0 -1
  16. package/dist/AssemblyManager/AssemblyAddForm.js +0 -1
  17. package/dist/AssemblyManager/AssemblyEditor.js +0 -1
  18. package/dist/AssemblyManager/AssemblyManager.js +0 -1
  19. package/dist/AssemblyManager/AssemblyTable.js +0 -1
  20. package/dist/AssemblyManager/index.js +0 -1
  21. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js +0 -1
  22. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +0 -1
  23. package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.js +0 -1
  24. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +0 -1
  25. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js +0 -1
  26. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js +0 -1
  27. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +0 -1
  28. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js +0 -1
  29. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js +0 -1
  30. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js +0 -1
  31. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +4 -6
  32. package/dist/HierarchicalTrackSelectorWidget/components/faceted/util.js +0 -1
  33. package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +35 -20
  34. package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +10 -7
  35. package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +2 -1
  36. package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js +0 -1
  37. package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js +22 -1
  38. package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js +1 -2
  39. package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js +0 -1
  40. package/dist/HierarchicalTrackSelectorWidget/components/util.d.ts +2 -1
  41. package/dist/HierarchicalTrackSelectorWidget/components/util.js +0 -1
  42. package/dist/HierarchicalTrackSelectorWidget/configSchema.js +0 -1
  43. package/dist/HierarchicalTrackSelectorWidget/filterTracks.d.ts +12 -0
  44. package/dist/HierarchicalTrackSelectorWidget/filterTracks.js +32 -0
  45. package/dist/HierarchicalTrackSelectorWidget/generateHierarchy.d.ts +21 -0
  46. package/dist/HierarchicalTrackSelectorWidget/generateHierarchy.js +98 -0
  47. package/dist/HierarchicalTrackSelectorWidget/index.js +0 -1
  48. package/dist/HierarchicalTrackSelectorWidget/model.d.ts +68 -28
  49. package/dist/HierarchicalTrackSelectorWidget/model.js +149 -118
  50. package/dist/HierarchicalTrackSelectorWidget/util.d.ts +12 -0
  51. package/dist/HierarchicalTrackSelectorWidget/util.js +53 -0
  52. package/dist/PluginStoreWidget/components/AddCustomPluginDialog.d.ts +7 -0
  53. package/dist/PluginStoreWidget/components/{CustomPluginForm.js → AddCustomPluginDialog.js} +12 -22
  54. package/dist/PluginStoreWidget/components/DeletePluginDialog.d.ts +5 -0
  55. package/dist/PluginStoreWidget/components/DeletePluginDialog.js +28 -0
  56. package/dist/PluginStoreWidget/components/InstalledPlugin.d.ts +2 -5
  57. package/dist/PluginStoreWidget/components/InstalledPlugin.js +19 -51
  58. package/dist/PluginStoreWidget/components/InstalledPluginsList.d.ts +2 -3
  59. package/dist/PluginStoreWidget/components/InstalledPluginsList.js +6 -10
  60. package/dist/PluginStoreWidget/components/PluginCard.js +3 -6
  61. package/dist/PluginStoreWidget/components/PluginStoreWidget.js +11 -40
  62. package/dist/PluginStoreWidget/components/util.d.ts +5 -0
  63. package/dist/PluginStoreWidget/components/util.js +29 -0
  64. package/dist/PluginStoreWidget/index.js +0 -1
  65. package/dist/PluginStoreWidget/model.d.ts +2 -2
  66. package/dist/PluginStoreWidget/model.js +2 -3
  67. package/dist/SetDefaultSession/SetDefaultSession.js +0 -1
  68. package/dist/SetDefaultSession/index.js +0 -1
  69. package/dist/index.js +0 -1
  70. package/dist/ucsc-trackhub/configSchema.js +0 -1
  71. package/dist/ucsc-trackhub/index.js +0 -1
  72. package/dist/ucsc-trackhub/model.js +0 -1
  73. package/dist/ucsc-trackhub/ucscAssemblies.js +0 -1
  74. package/dist/ucsc-trackhub/ucscTrackHub.js +0 -1
  75. package/esm/AddConnectionWidget/components/AddConnectionWidget.js +0 -1
  76. package/esm/AddConnectionWidget/components/ConfigureConnection.js +0 -1
  77. package/esm/AddConnectionWidget/components/ConnectionTypeSelect.js +0 -1
  78. package/esm/AddConnectionWidget/index.js +0 -1
  79. package/esm/AddConnectionWidget/model.js +0 -1
  80. package/esm/AddTrackWidget/components/AddTrackWidget.js +0 -1
  81. package/esm/AddTrackWidget/components/ConfirmTrack.js +0 -1
  82. package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js +0 -1
  83. package/esm/AddTrackWidget/components/PasteConfigWorkflow.js +0 -1
  84. package/esm/AddTrackWidget/components/TextIndexingConfig.js +0 -1
  85. package/esm/AddTrackWidget/components/TrackAdapterSelector.js +0 -1
  86. package/esm/AddTrackWidget/components/TrackSourceSelect.js +0 -1
  87. package/esm/AddTrackWidget/components/TrackTypeSelector.js +0 -1
  88. package/esm/AddTrackWidget/index.js +0 -1
  89. package/esm/AddTrackWidget/model.js +0 -1
  90. package/esm/AssemblyManager/AssemblyAddForm.js +0 -1
  91. package/esm/AssemblyManager/AssemblyEditor.js +0 -1
  92. package/esm/AssemblyManager/AssemblyManager.js +0 -1
  93. package/esm/AssemblyManager/AssemblyTable.js +0 -1
  94. package/esm/AssemblyManager/index.js +0 -1
  95. package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js +0 -1
  96. package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js +0 -1
  97. package/esm/HierarchicalTrackSelectorWidget/components/ShoppingCart.js +0 -1
  98. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js +0 -1
  99. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js +0 -1
  100. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js +0 -1
  101. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js +0 -1
  102. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js +0 -1
  103. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js +0 -1
  104. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js +0 -1
  105. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js +1 -3
  106. package/esm/HierarchicalTrackSelectorWidget/components/faceted/util.js +0 -1
  107. package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js +34 -19
  108. package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js +10 -7
  109. package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.d.ts +2 -1
  110. package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js +0 -1
  111. package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js +22 -1
  112. package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js +1 -2
  113. package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js +0 -1
  114. package/esm/HierarchicalTrackSelectorWidget/components/util.d.ts +2 -1
  115. package/esm/HierarchicalTrackSelectorWidget/components/util.js +0 -1
  116. package/esm/HierarchicalTrackSelectorWidget/configSchema.js +0 -1
  117. package/esm/HierarchicalTrackSelectorWidget/filterTracks.d.ts +12 -0
  118. package/esm/HierarchicalTrackSelectorWidget/filterTracks.js +28 -0
  119. package/esm/HierarchicalTrackSelectorWidget/generateHierarchy.d.ts +21 -0
  120. package/esm/HierarchicalTrackSelectorWidget/generateHierarchy.js +94 -0
  121. package/esm/HierarchicalTrackSelectorWidget/index.js +0 -1
  122. package/esm/HierarchicalTrackSelectorWidget/model.d.ts +68 -28
  123. package/esm/HierarchicalTrackSelectorWidget/model.js +151 -117
  124. package/esm/HierarchicalTrackSelectorWidget/util.d.ts +12 -0
  125. package/esm/HierarchicalTrackSelectorWidget/util.js +45 -0
  126. package/esm/PluginStoreWidget/components/AddCustomPluginDialog.d.ts +7 -0
  127. package/esm/PluginStoreWidget/components/{CustomPluginForm.js → AddCustomPluginDialog.js} +12 -22
  128. package/esm/PluginStoreWidget/components/DeletePluginDialog.d.ts +5 -0
  129. package/esm/PluginStoreWidget/components/DeletePluginDialog.js +22 -0
  130. package/esm/PluginStoreWidget/components/InstalledPlugin.d.ts +2 -5
  131. package/esm/PluginStoreWidget/components/InstalledPlugin.js +22 -54
  132. package/esm/PluginStoreWidget/components/InstalledPluginsList.d.ts +2 -3
  133. package/esm/PluginStoreWidget/components/InstalledPluginsList.js +6 -10
  134. package/esm/PluginStoreWidget/components/PluginCard.js +3 -6
  135. package/esm/PluginStoreWidget/components/PluginStoreWidget.js +12 -41
  136. package/esm/PluginStoreWidget/components/util.d.ts +5 -0
  137. package/esm/PluginStoreWidget/components/util.js +25 -0
  138. package/esm/PluginStoreWidget/index.js +0 -1
  139. package/esm/PluginStoreWidget/model.d.ts +2 -2
  140. package/esm/PluginStoreWidget/model.js +1 -2
  141. package/esm/SetDefaultSession/SetDefaultSession.js +0 -1
  142. package/esm/SetDefaultSession/index.js +0 -1
  143. package/esm/index.js +0 -1
  144. package/esm/ucsc-trackhub/configSchema.js +0 -1
  145. package/esm/ucsc-trackhub/index.js +0 -1
  146. package/esm/ucsc-trackhub/model.js +0 -1
  147. package/esm/ucsc-trackhub/ucscAssemblies.js +0 -1
  148. package/esm/ucsc-trackhub/ucscTrackHub.js +0 -1
  149. package/package.json +3 -4
  150. package/dist/AddConnectionWidget/components/AddConnectionWidget.js.map +0 -1
  151. package/dist/AddConnectionWidget/components/ConfigureConnection.js.map +0 -1
  152. package/dist/AddConnectionWidget/components/ConnectionTypeSelect.js.map +0 -1
  153. package/dist/AddConnectionWidget/index.js.map +0 -1
  154. package/dist/AddConnectionWidget/model.js.map +0 -1
  155. package/dist/AddTrackWidget/components/AddTrackWidget.js.map +0 -1
  156. package/dist/AddTrackWidget/components/ConfirmTrack.js.map +0 -1
  157. package/dist/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +0 -1
  158. package/dist/AddTrackWidget/components/PasteConfigWorkflow.js.map +0 -1
  159. package/dist/AddTrackWidget/components/TextIndexingConfig.js.map +0 -1
  160. package/dist/AddTrackWidget/components/TrackAdapterSelector.js.map +0 -1
  161. package/dist/AddTrackWidget/components/TrackSourceSelect.js.map +0 -1
  162. package/dist/AddTrackWidget/components/TrackTypeSelector.js.map +0 -1
  163. package/dist/AddTrackWidget/index.js.map +0 -1
  164. package/dist/AddTrackWidget/model.js.map +0 -1
  165. package/dist/AssemblyManager/AssemblyAddForm.js.map +0 -1
  166. package/dist/AssemblyManager/AssemblyEditor.js.map +0 -1
  167. package/dist/AssemblyManager/AssemblyManager.js.map +0 -1
  168. package/dist/AssemblyManager/AssemblyTable.js.map +0 -1
  169. package/dist/AssemblyManager/index.js.map +0 -1
  170. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js.map +0 -1
  171. package/dist/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +0 -1
  172. package/dist/HierarchicalTrackSelectorWidget/components/ShoppingCart.js.map +0 -1
  173. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js.map +0 -1
  174. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js.map +0 -1
  175. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js.map +0 -1
  176. package/dist/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js.map +0 -1
  177. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js.map +0 -1
  178. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js.map +0 -1
  179. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js.map +0 -1
  180. package/dist/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js.map +0 -1
  181. package/dist/HierarchicalTrackSelectorWidget/components/faceted/util.js.map +0 -1
  182. package/dist/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js.map +0 -1
  183. package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js.map +0 -1
  184. package/dist/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js.map +0 -1
  185. package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js.map +0 -1
  186. package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js.map +0 -1
  187. package/dist/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js.map +0 -1
  188. package/dist/HierarchicalTrackSelectorWidget/components/util.js.map +0 -1
  189. package/dist/HierarchicalTrackSelectorWidget/configSchema.js.map +0 -1
  190. package/dist/HierarchicalTrackSelectorWidget/index.js.map +0 -1
  191. package/dist/HierarchicalTrackSelectorWidget/model.js.map +0 -1
  192. package/dist/PluginStoreWidget/components/CustomPluginForm.d.ts +0 -9
  193. package/dist/PluginStoreWidget/components/CustomPluginForm.js.map +0 -1
  194. package/dist/PluginStoreWidget/components/InstalledPlugin.js.map +0 -1
  195. package/dist/PluginStoreWidget/components/InstalledPluginsList.js.map +0 -1
  196. package/dist/PluginStoreWidget/components/PluginCard.js.map +0 -1
  197. package/dist/PluginStoreWidget/components/PluginStoreWidget.js.map +0 -1
  198. package/dist/PluginStoreWidget/index.js.map +0 -1
  199. package/dist/PluginStoreWidget/model.js.map +0 -1
  200. package/dist/SetDefaultSession/SetDefaultSession.js.map +0 -1
  201. package/dist/SetDefaultSession/index.js.map +0 -1
  202. package/dist/index.js.map +0 -1
  203. package/dist/ucsc-trackhub/configSchema.js.map +0 -1
  204. package/dist/ucsc-trackhub/index.js.map +0 -1
  205. package/dist/ucsc-trackhub/model.js.map +0 -1
  206. package/dist/ucsc-trackhub/ucscAssemblies.js.map +0 -1
  207. package/dist/ucsc-trackhub/ucscTrackHub.js.map +0 -1
  208. package/esm/AddConnectionWidget/components/AddConnectionWidget.js.map +0 -1
  209. package/esm/AddConnectionWidget/components/ConfigureConnection.js.map +0 -1
  210. package/esm/AddConnectionWidget/components/ConnectionTypeSelect.js.map +0 -1
  211. package/esm/AddConnectionWidget/index.js.map +0 -1
  212. package/esm/AddConnectionWidget/model.js.map +0 -1
  213. package/esm/AddTrackWidget/components/AddTrackWidget.js.map +0 -1
  214. package/esm/AddTrackWidget/components/ConfirmTrack.js.map +0 -1
  215. package/esm/AddTrackWidget/components/DefaultAddTrackWorkflow.js.map +0 -1
  216. package/esm/AddTrackWidget/components/PasteConfigWorkflow.js.map +0 -1
  217. package/esm/AddTrackWidget/components/TextIndexingConfig.js.map +0 -1
  218. package/esm/AddTrackWidget/components/TrackAdapterSelector.js.map +0 -1
  219. package/esm/AddTrackWidget/components/TrackSourceSelect.js.map +0 -1
  220. package/esm/AddTrackWidget/components/TrackTypeSelector.js.map +0 -1
  221. package/esm/AddTrackWidget/index.js.map +0 -1
  222. package/esm/AddTrackWidget/model.js.map +0 -1
  223. package/esm/AssemblyManager/AssemblyAddForm.js.map +0 -1
  224. package/esm/AssemblyManager/AssemblyEditor.js.map +0 -1
  225. package/esm/AssemblyManager/AssemblyManager.js.map +0 -1
  226. package/esm/AssemblyManager/AssemblyTable.js.map +0 -1
  227. package/esm/AssemblyManager/index.js.map +0 -1
  228. package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalFab.js.map +0 -1
  229. package/esm/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.js.map +0 -1
  230. package/esm/HierarchicalTrackSelectorWidget/components/ShoppingCart.js.map +0 -1
  231. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.js.map +0 -1
  232. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.js.map +0 -1
  233. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.js.map +0 -1
  234. package/esm/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.js.map +0 -1
  235. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.js.map +0 -1
  236. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.js.map +0 -1
  237. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.js.map +0 -1
  238. package/esm/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.js.map +0 -1
  239. package/esm/HierarchicalTrackSelectorWidget/components/faceted/util.js.map +0 -1
  240. package/esm/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.js.map +0 -1
  241. package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.js.map +0 -1
  242. package/esm/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.js.map +0 -1
  243. package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.js.map +0 -1
  244. package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.js.map +0 -1
  245. package/esm/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.js.map +0 -1
  246. package/esm/HierarchicalTrackSelectorWidget/components/util.js.map +0 -1
  247. package/esm/HierarchicalTrackSelectorWidget/configSchema.js.map +0 -1
  248. package/esm/HierarchicalTrackSelectorWidget/index.js.map +0 -1
  249. package/esm/HierarchicalTrackSelectorWidget/model.js.map +0 -1
  250. package/esm/PluginStoreWidget/components/CustomPluginForm.d.ts +0 -9
  251. package/esm/PluginStoreWidget/components/CustomPluginForm.js.map +0 -1
  252. package/esm/PluginStoreWidget/components/InstalledPlugin.js.map +0 -1
  253. package/esm/PluginStoreWidget/components/InstalledPluginsList.js.map +0 -1
  254. package/esm/PluginStoreWidget/components/PluginCard.js.map +0 -1
  255. package/esm/PluginStoreWidget/components/PluginStoreWidget.js.map +0 -1
  256. package/esm/PluginStoreWidget/index.js.map +0 -1
  257. package/esm/PluginStoreWidget/model.js.map +0 -1
  258. package/esm/SetDefaultSession/SetDefaultSession.js.map +0 -1
  259. package/esm/SetDefaultSession/index.js.map +0 -1
  260. package/esm/index.js.map +0 -1
  261. package/esm/ucsc-trackhub/configSchema.js.map +0 -1
  262. package/esm/ucsc-trackhub/index.js.map +0 -1
  263. package/esm/ucsc-trackhub/model.js.map +0 -1
  264. package/esm/ucsc-trackhub/ucscAssemblies.js.map +0 -1
  265. package/esm/ucsc-trackhub/ucscTrackHub.js.map +0 -1
  266. package/src/AddConnectionWidget/components/AddConnectionWidget.test.tsx +0 -139
  267. package/src/AddConnectionWidget/components/AddConnectionWidget.tsx +0 -114
  268. package/src/AddConnectionWidget/components/ConfigureConnection.tsx +0 -26
  269. package/src/AddConnectionWidget/components/ConnectionTypeSelect.tsx +0 -64
  270. package/src/AddConnectionWidget/components/__snapshots__/AddConnectionWidget.test.tsx.snap +0 -236
  271. package/src/AddConnectionWidget/index.ts +0 -19
  272. package/src/AddConnectionWidget/model.ts +0 -7
  273. package/src/AddTrackWidget/components/AddTrackWidget.test.tsx +0 -118
  274. package/src/AddTrackWidget/components/AddTrackWidget.tsx +0 -43
  275. package/src/AddTrackWidget/components/ConfirmTrack.tsx +0 -189
  276. package/src/AddTrackWidget/components/DefaultAddTrackWorkflow.tsx +0 -201
  277. package/src/AddTrackWidget/components/PasteConfigWorkflow.tsx +0 -65
  278. package/src/AddTrackWidget/components/TextIndexingConfig.tsx +0 -132
  279. package/src/AddTrackWidget/components/TrackAdapterSelector.tsx +0 -73
  280. package/src/AddTrackWidget/components/TrackSourceSelect.tsx +0 -48
  281. package/src/AddTrackWidget/components/TrackTypeSelector.tsx +0 -46
  282. package/src/AddTrackWidget/index.test.tsx +0 -247
  283. package/src/AddTrackWidget/index.ts +0 -19
  284. package/src/AddTrackWidget/model.ts +0 -179
  285. package/src/AssemblyManager/AssemblyAddForm.tsx +0 -250
  286. package/src/AssemblyManager/AssemblyEditor.tsx +0 -20
  287. package/src/AssemblyManager/AssemblyManager.test.tsx +0 -93
  288. package/src/AssemblyManager/AssemblyManager.tsx +0 -84
  289. package/src/AssemblyManager/AssemblyTable.tsx +0 -88
  290. package/src/AssemblyManager/index.ts +0 -1
  291. package/src/HierarchicalTrackSelectorWidget/components/HierarchicalFab.tsx +0 -94
  292. package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.test.tsx +0 -148
  293. package/src/HierarchicalTrackSelectorWidget/components/HierarchicalTrackSelector.tsx +0 -87
  294. package/src/HierarchicalTrackSelectorWidget/components/ShoppingCart.tsx +0 -73
  295. package/src/HierarchicalTrackSelectorWidget/components/__snapshots__/HierarchicalTrackSelector.test.tsx.snap +0 -265
  296. package/src/HierarchicalTrackSelectorWidget/components/dialogs/CloseConnectionDialog.tsx +0 -65
  297. package/src/HierarchicalTrackSelectorWidget/components/dialogs/DeleteConnectionDialog.tsx +0 -53
  298. package/src/HierarchicalTrackSelectorWidget/components/dialogs/ManageConnectionsDialog.tsx +0 -84
  299. package/src/HierarchicalTrackSelectorWidget/components/dialogs/ToggleConnectionsDialog.tsx +0 -127
  300. package/src/HierarchicalTrackSelectorWidget/components/faceted/FacetFilters.tsx +0 -138
  301. package/src/HierarchicalTrackSelectorWidget/components/faceted/FacetedDialog.tsx +0 -29
  302. package/src/HierarchicalTrackSelectorWidget/components/faceted/FacetedHeader.tsx +0 -96
  303. package/src/HierarchicalTrackSelectorWidget/components/faceted/FacetedSelector.tsx +0 -342
  304. package/src/HierarchicalTrackSelectorWidget/components/faceted/util.ts +0 -5
  305. package/src/HierarchicalTrackSelectorWidget/components/tree/HamburgerMenu.tsx +0 -190
  306. package/src/HierarchicalTrackSelectorWidget/components/tree/HierarchicalHeader.tsx +0 -83
  307. package/src/HierarchicalTrackSelectorWidget/components/tree/HierarchicalTree.tsx +0 -101
  308. package/src/HierarchicalTrackSelectorWidget/components/tree/TrackCategory.tsx +0 -92
  309. package/src/HierarchicalTrackSelectorWidget/components/tree/TrackLabel.tsx +0 -106
  310. package/src/HierarchicalTrackSelectorWidget/components/tree/TrackListNode.tsx +0 -84
  311. package/src/HierarchicalTrackSelectorWidget/components/util.ts +0 -41
  312. package/src/HierarchicalTrackSelectorWidget/configSchema.ts +0 -3
  313. package/src/HierarchicalTrackSelectorWidget/index.ts +0 -25
  314. package/src/HierarchicalTrackSelectorWidget/model.test.js +0 -24
  315. package/src/HierarchicalTrackSelectorWidget/model.ts +0 -339
  316. package/src/PluginStoreWidget/components/CustomPluginForm.tsx +0 -165
  317. package/src/PluginStoreWidget/components/InstalledPlugin.tsx +0 -167
  318. package/src/PluginStoreWidget/components/InstalledPluginsList.tsx +0 -49
  319. package/src/PluginStoreWidget/components/PluginCard.tsx +0 -106
  320. package/src/PluginStoreWidget/components/PluginStoreWidget.test.tsx +0 -132
  321. package/src/PluginStoreWidget/components/PluginStoreWidget.tsx +0 -181
  322. package/src/PluginStoreWidget/components/__snapshots__/PluginStoreWidget.test.tsx.snap +0 -869
  323. package/src/PluginStoreWidget/index.ts +0 -19
  324. package/src/PluginStoreWidget/model.test.tsx +0 -15
  325. package/src/PluginStoreWidget/model.ts +0 -26
  326. package/src/SetDefaultSession/SetDefaultSession.test.tsx +0 -59
  327. package/src/SetDefaultSession/SetDefaultSession.tsx +0 -76
  328. package/src/SetDefaultSession/index.ts +0 -1
  329. package/src/__snapshots__/index.test.ts.snap +0 -9
  330. package/src/index.test.ts +0 -54
  331. package/src/index.ts +0 -37
  332. package/src/ucsc-trackhub/configSchema.ts +0 -41
  333. package/src/ucsc-trackhub/index.ts +0 -19
  334. package/src/ucsc-trackhub/model.ts +0 -111
  335. package/src/ucsc-trackhub/ucscAssemblies.ts +0 -201
  336. package/src/ucsc-trackhub/ucscTrackHub.ts +0 -325
@@ -0,0 +1,28 @@
1
+ "use strict";
2
+ var __importDefault = (this && this.__importDefault) || function (mod) {
3
+ return (mod && mod.__esModule) ? mod : { "default": mod };
4
+ };
5
+ Object.defineProperty(exports, "__esModule", { value: true });
6
+ const react_1 = __importDefault(require("react"));
7
+ const material_1 = require("@mui/material");
8
+ const ui_1 = require("@jbrowse/core/ui");
9
+ function DeletePluginDialog({ onClose, plugin, }) {
10
+ return (react_1.default.createElement(ui_1.Dialog, { open: true, onClose: () => onClose(), title: `Remove ${plugin}` },
11
+ react_1.default.createElement(material_1.DialogContent, null,
12
+ react_1.default.createElement(material_1.Typography, null,
13
+ "Please confirm that you want to remove ",
14
+ plugin,
15
+ "."),
16
+ react_1.default.createElement(material_1.Typography, { color: "error" }, "Note: if any resources in this session still use this plugin, it may cause your session to crash")),
17
+ react_1.default.createElement(material_1.DialogActions, null,
18
+ react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", onClick: () => {
19
+ // avoid showing runtime plugin warning
20
+ window.setTimeout(() => {
21
+ onClose(plugin);
22
+ }, 500);
23
+ } }, "Confirm"),
24
+ react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", onClick: () => {
25
+ onClose();
26
+ } }, "Cancel"))));
27
+ }
28
+ exports.default = DeletePluginDialog;
@@ -1,11 +1,8 @@
1
1
  import React from 'react';
2
- import PluginManager from '@jbrowse/core/PluginManager';
3
2
  import { BasePlugin } from '@jbrowse/core/util/types';
4
3
  import { PluginStoreModel } from '../model';
5
- declare function InstalledPlugin({ plugin, model, pluginManager, }: {
4
+ declare const _default: ({ plugin, model, }: {
6
5
  plugin: BasePlugin;
7
6
  model: PluginStoreModel;
8
- pluginManager: PluginManager;
9
- }): React.JSX.Element;
10
- declare const _default: typeof InstalledPlugin;
7
+ }) => React.JSX.Element;
11
8
  export default _default;
@@ -28,22 +28,15 @@ var __importDefault = (this && this.__importDefault) || function (mod) {
28
28
  Object.defineProperty(exports, "__esModule", { value: true });
29
29
  const react_1 = __importStar(require("react"));
30
30
  const mobx_react_1 = require("mobx-react");
31
- const mobx_state_tree_1 = require("mobx-state-tree");
32
31
  const material_1 = require("@mui/material");
33
32
  const mui_1 = require("tss-react/mui");
34
33
  const Close_1 = __importDefault(require("@mui/icons-material/Close"));
35
34
  const Lock_1 = __importDefault(require("@mui/icons-material/Lock"));
36
35
  const util_1 = require("@jbrowse/core/util");
37
36
  const types_1 = require("@jbrowse/core/util/types");
37
+ // lazies
38
+ const DeletePluginDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./DeletePluginDialog'))));
38
39
  const useStyles = (0, mui_1.makeStyles)()(() => ({
39
- closeDialog: {
40
- position: 'absolute',
41
- right: 0,
42
- top: 0,
43
- },
44
- dialogContainer: {
45
- margin: 15,
46
- },
47
40
  lockedPluginTooltip: {
48
41
  marginRight: '0.5rem',
49
42
  },
@@ -53,53 +46,28 @@ function LockedPlugin() {
53
46
  return (react_1.default.createElement(material_1.Tooltip, { className: classes.lockedPluginTooltip, title: "This plugin was installed by an administrator, you cannot remove it." },
54
47
  react_1.default.createElement(Lock_1.default, null)));
55
48
  }
56
- function PluginDialog({ onClose, plugin, }) {
57
- const { classes } = useStyles();
58
- return (react_1.default.createElement(material_1.Dialog, { open: true, onClose: () => onClose() },
59
- react_1.default.createElement(material_1.DialogTitle, null,
60
- react_1.default.createElement(material_1.IconButton, { className: classes.closeDialog, "aria-label": "close-dialog", onClick: () => onClose() },
61
- react_1.default.createElement(Close_1.default, null))),
62
- react_1.default.createElement(material_1.DialogContent, null,
63
- react_1.default.createElement(material_1.Typography, null,
64
- "Please confirm that you want to remove ",
65
- plugin,
66
- ". Note: if any resources in this session still use this plugin, it may cause your session to crash"),
67
- react_1.default.createElement(material_1.DialogActions, null,
68
- react_1.default.createElement(material_1.Button, { variant: "contained", color: "primary", onClick: () => {
69
- // avoid showing runtime plugin warning
70
- window.setTimeout(() => {
71
- onClose(plugin);
72
- }, 500);
73
- } }, "Confirm"),
74
- react_1.default.createElement(material_1.Button, { variant: "contained", color: "secondary", onClick: () => {
75
- onClose();
76
- } }, "Cancel")))));
77
- }
78
- function InstalledPlugin({ plugin, model, pluginManager, }) {
49
+ exports.default = (0, mobx_react_1.observer)(function ({ plugin, model, }) {
79
50
  const [dialogPlugin, setDialogPlugin] = (0, react_1.useState)();
51
+ const { pluginManager } = (0, util_1.getEnv)(model);
80
52
  const session = (0, util_1.getSession)(model);
81
- const { sessionPlugins } = session;
82
- const isSessionPlugin = sessionPlugins === null || sessionPlugins === void 0 ? void 0 : sessionPlugins.some(p => pluginManager.pluginMetadata[plugin.name].url === p.url);
83
- // eslint-disable-next-line @typescript-eslint/no-explicit-any
84
- const rootModel = (0, mobx_state_tree_1.getParent)(model, 3);
85
- const { jbrowse, adminMode } = rootModel;
53
+ const { jbrowse, adminMode, sessionPlugins } = session;
54
+ const isSessionPlugin = sessionPlugins === null || sessionPlugins === void 0 ? void 0 : sessionPlugins.some((p) => pluginManager.pluginMetadata[plugin.name].url === p.url);
86
55
  return (react_1.default.createElement(react_1.default.Fragment, null,
87
- dialogPlugin ? (react_1.default.createElement(PluginDialog, { plugin: dialogPlugin, onClose: name => {
88
- if (name) {
89
- const pluginMetadata = pluginManager.pluginMetadata[plugin.name];
90
- if (adminMode) {
91
- jbrowse.removePlugin(pluginMetadata);
56
+ dialogPlugin ? (react_1.default.createElement(react_1.Suspense, { fallback: react_1.default.createElement(react_1.default.Fragment, null) },
57
+ react_1.default.createElement(DeletePluginDialog, { plugin: dialogPlugin, onClose: name => {
58
+ if (name) {
59
+ const pluginMetadata = pluginManager.pluginMetadata[plugin.name];
60
+ if (adminMode) {
61
+ jbrowse.removePlugin(pluginMetadata);
62
+ }
63
+ else if ((0, types_1.isSessionWithSessionPlugins)(session)) {
64
+ session.removeSessionPlugin(pluginMetadata);
65
+ }
92
66
  }
93
- else if ((0, types_1.isSessionWithSessionPlugins)(session)) {
94
- session.removeSessionPlugin(pluginMetadata);
95
- }
96
- }
97
- setDialogPlugin(undefined);
98
- } })) : null,
67
+ setDialogPlugin(undefined);
68
+ } }))) : null,
99
69
  react_1.default.createElement(material_1.ListItem, { key: plugin.name },
100
70
  adminMode || isSessionPlugin ? (react_1.default.createElement(material_1.IconButton, { "aria-label": "removePlugin", "data-testid": `removePlugin-${plugin.name}`, onClick: () => setDialogPlugin(plugin.name) },
101
71
  react_1.default.createElement(Close_1.default, null))) : (react_1.default.createElement(LockedPlugin, null)),
102
72
  react_1.default.createElement(material_1.Typography, null, plugin.name))));
103
- }
104
- exports.default = (0, mobx_react_1.observer)(InstalledPlugin);
105
- //# sourceMappingURL=InstalledPlugin.js.map
73
+ });
@@ -1,9 +1,8 @@
1
1
  import React from 'react';
2
2
  import PluginManager from '@jbrowse/core/PluginManager';
3
3
  import { PluginStoreModel } from '../model';
4
- declare function InstalledPluginsList({ pluginManager, model, }: {
4
+ declare const _default: ({ pluginManager, model, }: {
5
5
  pluginManager: PluginManager;
6
6
  model: PluginStoreModel;
7
- }): React.JSX.Element;
8
- declare const _default: typeof InstalledPluginsList;
7
+ }) => React.JSX.Element;
9
8
  export default _default;
@@ -7,15 +7,11 @@ const react_1 = __importDefault(require("react"));
7
7
  const mobx_react_1 = require("mobx-react");
8
8
  const material_1 = require("@mui/material");
9
9
  const InstalledPlugin_1 = __importDefault(require("./InstalledPlugin"));
10
- function InstalledPluginsList({ pluginManager, model, }) {
10
+ exports.default = (0, mobx_react_1.observer)(function InstalledPluginsList({ pluginManager, model, }) {
11
11
  const { plugins } = pluginManager;
12
- const corePlugins = new Set(plugins
13
- .filter(p => { var _a; return (_a = pluginManager.pluginMetadata[p.name]) === null || _a === void 0 ? void 0 : _a.isCore; })
14
- .map(p => p.name));
15
- const externalPlugins = plugins.filter(plugin => !corePlugins.has(plugin.name));
12
+ const { filterText } = model;
13
+ const externalPlugins = plugins.filter(p => { var _a; return !((_a = pluginManager.pluginMetadata[p.name]) === null || _a === void 0 ? void 0 : _a.isCore); });
16
14
  return (react_1.default.createElement(material_1.List, null, externalPlugins.length > 0 ? (externalPlugins
17
- .filter(plugin => plugin.name.toLowerCase().includes(model.filterText.toLowerCase()))
18
- .map(plugin => (react_1.default.createElement(InstalledPlugin_1.default, { key: plugin.name, plugin: plugin, model: model, pluginManager: pluginManager })))) : (react_1.default.createElement(material_1.Typography, null, "No plugins currently installed"))));
19
- }
20
- exports.default = (0, mobx_react_1.observer)(InstalledPluginsList);
21
- //# sourceMappingURL=InstalledPluginsList.js.map
15
+ .filter(p => p.name.toLowerCase().includes(filterText.toLowerCase()))
16
+ .map(p => react_1.default.createElement(InstalledPlugin_1.default, { key: p.name, plugin: p, model: model }))) : (react_1.default.createElement(material_1.Typography, null, "No plugins currently installed"))));
17
+ });
@@ -39,7 +39,7 @@ const Add_1 = __importDefault(require("@mui/icons-material/Add"));
39
39
  const Check_1 = __importDefault(require("@mui/icons-material/Check"));
40
40
  const useStyles = (0, mui_1.makeStyles)()({
41
41
  card: {
42
- margin: '1em',
42
+ margin: '0.5em',
43
43
  },
44
44
  icon: {
45
45
  marginLeft: '0.5em',
@@ -51,7 +51,6 @@ const useStyles = (0, mui_1.makeStyles)()({
51
51
  dataField: {
52
52
  display: 'flex',
53
53
  alignItems: 'center',
54
- margin: '0.4em 0em',
55
54
  },
56
55
  });
57
56
  exports.default = (0, mobx_react_1.observer)(function PluginCard({ plugin, model, adminMode, }) {
@@ -67,9 +66,8 @@ exports.default = (0, mobx_react_1.observer)(function PluginCard({ plugin, model
67
66
  const { jbrowse } = rootModel;
68
67
  return (react_1.default.createElement(material_1.Card, { variant: "outlined", key: plugin.name, className: classes.card },
69
68
  react_1.default.createElement(material_1.CardContent, null,
70
- react_1.default.createElement("div", { className: classes.dataField },
71
- react_1.default.createElement(material_1.Typography, { variant: "h5" },
72
- react_1.default.createElement(material_1.Link, { href: `${plugin.location}#readme`, target: "_blank", rel: "noopener" }, plugin.name))),
69
+ react_1.default.createElement(material_1.Typography, { variant: "h5" },
70
+ react_1.default.createElement(material_1.Link, { href: `${plugin.location}#readme`, target: "_blank", rel: "noopener" }, plugin.name)),
73
71
  react_1.default.createElement("div", { className: classes.dataField },
74
72
  react_1.default.createElement(Person_1.default, { style: { marginRight: '0.5em' } }),
75
73
  react_1.default.createElement(material_1.Typography, null, plugin.authors.join(', '))),
@@ -86,4 +84,3 @@ exports.default = (0, mobx_react_1.observer)(function PluginCard({ plugin, model
86
84
  setTempDisabled(true);
87
85
  } }, isInstalled ? 'Installed' : 'Install'))));
88
86
  });
89
- //# sourceMappingURL=PluginCard.js.map
@@ -40,16 +40,14 @@ const InfoOutlined_1 = __importDefault(require("@mui/icons-material/InfoOutlined
40
40
  // locals
41
41
  const InstalledPluginsList_1 = __importDefault(require("./InstalledPluginsList"));
42
42
  const PluginCard_1 = __importDefault(require("./PluginCard"));
43
- const CustomPluginForm_1 = __importDefault(require("./CustomPluginForm"));
43
+ const util_2 = require("./util");
44
+ // lazies
45
+ const AddCustomPluginDialog = (0, react_1.lazy)(() => Promise.resolve().then(() => __importStar(require('./AddCustomPluginDialog'))));
44
46
  const useStyles = (0, mui_1.makeStyles)()(theme => ({
45
- root: {
46
- margin: theme.spacing(1),
47
- },
48
47
  expandIcon: {
49
48
  color: theme.palette.tertiary.contrastText,
50
49
  },
51
50
  adminBadge: {
52
- margin: '0.5em',
53
51
  borderRadius: 3,
54
52
  backgroundColor: theme.palette.quaternary.main,
55
53
  padding: '1em',
@@ -57,43 +55,17 @@ const useStyles = (0, mui_1.makeStyles)()(theme => ({
57
55
  alignContent: 'center',
58
56
  },
59
57
  customPluginButton: {
60
- margin: '0.5em',
58
+ margin: '1em auto',
61
59
  display: 'flex',
62
- justifyContent: 'center',
63
60
  },
64
61
  }));
65
62
  function PluginStoreWidget({ model }) {
66
63
  const { classes } = useStyles();
67
- const [pluginArray, setPluginArray] = (0, react_1.useState)();
68
- const [error, setError] = (0, react_1.useState)();
69
- const [customPluginFormOpen, setCustomPluginFormOpen] = (0, react_1.useState)(false);
64
+ const { plugins, error } = (0, util_2.useFetchPlugins)();
65
+ const [open, setOpen] = (0, react_1.useState)(false);
70
66
  const { adminMode } = (0, util_1.getSession)(model);
71
67
  const { pluginManager } = (0, mobx_state_tree_1.getEnv)(model);
72
- (0, react_1.useEffect)(() => {
73
- const controller = new AbortController();
74
- const { signal } = controller;
75
- (async () => {
76
- try {
77
- const response = await fetch('https://jbrowse.org/plugin-store/plugins.json', { signal });
78
- if (!response.ok) {
79
- const err = await response.text();
80
- throw new Error(`Failed to fetch plugin data: ${response.status} ${response.statusText} ${err}`);
81
- }
82
- const array = await response.json();
83
- if (!signal.aborted) {
84
- setPluginArray(array.plugins);
85
- }
86
- }
87
- catch (e) {
88
- console.error(e);
89
- setError(e);
90
- }
91
- })();
92
- return () => {
93
- controller.abort();
94
- };
95
- }, []);
96
- return (react_1.default.createElement("div", { className: classes.root },
68
+ return (react_1.default.createElement("div", null,
97
69
  adminMode && (react_1.default.createElement(react_1.default.Fragment, null,
98
70
  !util_1.isElectron && (react_1.default.createElement("div", { className: classes.adminBadge },
99
71
  react_1.default.createElement(InfoOutlined_1.default, { style: { marginRight: '0.3em' } }),
@@ -101,9 +73,9 @@ function PluginStoreWidget({ model }) {
101
73
  "You are using the ",
102
74
  react_1.default.createElement("code", null, "admin-server"),
103
75
  ". Any changes you make will be saved to your configuration file. You also have the ability to add custom plugins that are not in the store."))),
104
- react_1.default.createElement("div", { className: classes.customPluginButton },
105
- react_1.default.createElement(material_1.Button, { variant: "contained", onClick: () => setCustomPluginFormOpen(true) }, "Add custom plugin")),
106
- react_1.default.createElement(CustomPluginForm_1.default, { open: customPluginFormOpen, onClose: () => setCustomPluginFormOpen(false), model: model }))),
76
+ react_1.default.createElement(material_1.Button, { className: classes.customPluginButton, variant: "contained", onClick: () => setOpen(true) }, "Add custom plugin"),
77
+ open ? (react_1.default.createElement(react_1.Suspense, { fallback: react_1.default.createElement(react_1.default.Fragment, null) },
78
+ react_1.default.createElement(AddCustomPluginDialog, { onClose: () => setOpen(false), model: model }))) : null)),
107
79
  react_1.default.createElement(material_1.TextField, { label: "Filter plugins", value: model.filterText, onChange: event => model.setFilterText(event.target.value), fullWidth: true, InputProps: {
108
80
  endAdornment: (react_1.default.createElement(material_1.InputAdornment, { position: "end" },
109
81
  react_1.default.createElement(material_1.IconButton, { onClick: () => model.clearFilterText() },
@@ -117,7 +89,7 @@ function PluginStoreWidget({ model }) {
117
89
  react_1.default.createElement(material_1.Accordion, { defaultExpanded: true },
118
90
  react_1.default.createElement(material_1.AccordionSummary, { expandIcon: react_1.default.createElement(ExpandMore_1.default, { className: classes.expandIcon }) },
119
91
  react_1.default.createElement(material_1.Typography, { variant: "h5" }, "Available plugins")),
120
- error ? (react_1.default.createElement(material_1.Typography, { color: "error" }, `${error}`)) : pluginArray ? (pluginArray
92
+ error ? (react_1.default.createElement(material_1.Typography, { color: "error" }, `${error}`)) : plugins ? (plugins
121
93
  .filter(plugin => {
122
94
  // If plugin only has cjsUrl, don't display outside desktop
123
95
  return (!(util_1.isElectron && plugin.cjsUrl) &&
@@ -128,4 +100,3 @@ function PluginStoreWidget({ model }) {
128
100
  .map(plugin => (react_1.default.createElement(PluginCard_1.default, { key: plugin.name, plugin: plugin, model: model, adminMode: !!adminMode })))) : (react_1.default.createElement(ui_1.LoadingEllipses, null)))));
129
101
  }
130
102
  exports.default = (0, mobx_react_1.observer)(PluginStoreWidget);
131
- //# sourceMappingURL=PluginStoreWidget.js.map
@@ -0,0 +1,5 @@
1
+ import { JBrowsePlugin } from '@jbrowse/core/util/types';
2
+ export declare function useFetchPlugins(): {
3
+ plugins: JBrowsePlugin[] | undefined;
4
+ error: unknown;
5
+ };
@@ -0,0 +1,29 @@
1
+ "use strict";
2
+ Object.defineProperty(exports, "__esModule", { value: true });
3
+ exports.useFetchPlugins = void 0;
4
+ const react_1 = require("react");
5
+ function useFetchPlugins() {
6
+ const [plugins, setPlugins] = (0, react_1.useState)();
7
+ const [error, setError] = (0, react_1.useState)();
8
+ (0, react_1.useEffect)(() => {
9
+ // eslint-disable-next-line @typescript-eslint/no-floating-promises
10
+ ;
11
+ (async () => {
12
+ try {
13
+ const res = await fetch('https://jbrowse.org/plugin-store/plugins.json');
14
+ if (!res.ok) {
15
+ const err = await res.text();
16
+ throw new Error(`HTTP ${res.status} fetching plugins: ${err}`);
17
+ }
18
+ const array = await res.json();
19
+ setPlugins(array.plugins);
20
+ }
21
+ catch (e) {
22
+ console.error(e);
23
+ setError(e);
24
+ }
25
+ })();
26
+ }, []);
27
+ return { plugins, error };
28
+ }
29
+ exports.useFetchPlugins = useFetchPlugins;
@@ -42,4 +42,3 @@ exports.default = (pluginManager) => {
42
42
  });
43
43
  });
44
44
  };
45
- //# sourceMappingURL=index.js.map
@@ -1,6 +1,6 @@
1
1
  import { Instance } from 'mobx-state-tree';
2
2
  import PluginManager from '@jbrowse/core/PluginManager';
3
- export default function f(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
3
+ export default function stateModelFactory(pluginManager: PluginManager): import("mobx-state-tree").IModelType<{
4
4
  id: import("mobx-state-tree").IOptionalIType<import("mobx-state-tree").ISimpleType<string>, [undefined]>;
5
5
  type: import("mobx-state-tree").ISimpleType<"PluginStoreWidget">;
6
6
  filterText: import("mobx-state-tree").IType<string | undefined, string, string>;
@@ -9,5 +9,5 @@ export default function f(pluginManager: PluginManager): import("mobx-state-tree
9
9
  clearFilterText(): void;
10
10
  setFilterText(newText: string): void;
11
11
  }, import("mobx-state-tree")._NotCustomized, import("mobx-state-tree")._NotCustomized>;
12
- export type PluginStoreStateModel = ReturnType<typeof f>;
12
+ export type PluginStoreStateModel = ReturnType<typeof stateModelFactory>;
13
13
  export type PluginStoreModel = Instance<PluginStoreStateModel>;
@@ -2,7 +2,7 @@
2
2
  Object.defineProperty(exports, "__esModule", { value: true });
3
3
  const mobx_state_tree_1 = require("mobx-state-tree");
4
4
  const mst_1 = require("@jbrowse/core/util/types/mst");
5
- function f(pluginManager) {
5
+ function stateModelFactory(pluginManager) {
6
6
  return mobx_state_tree_1.types
7
7
  .model('PluginStoreModel', {
8
8
  id: mst_1.ElementId,
@@ -19,5 +19,4 @@ function f(pluginManager) {
19
19
  },
20
20
  }));
21
21
  }
22
- exports.default = f;
23
- //# sourceMappingURL=model.js.map
22
+ exports.default = stateModelFactory;
@@ -36,4 +36,3 @@ const SetDefaultSession = (0, mobx_react_1.observer)(({ rootModel, onClose }) =>
36
36
  } }, "Set current session as default"))));
37
37
  });
38
38
  exports.default = SetDefaultSession;
39
- //# sourceMappingURL=SetDefaultSession.js.map
@@ -6,4 +6,3 @@ Object.defineProperty(exports, "__esModule", { value: true });
6
6
  exports.default = void 0;
7
7
  var SetDefaultSession_1 = require("./SetDefaultSession");
8
8
  Object.defineProperty(exports, "default", { enumerable: true, get: function () { return __importDefault(SetDefaultSession_1).default; } });
9
- //# sourceMappingURL=index.js.map
package/dist/index.js CHANGED
@@ -57,4 +57,3 @@ class default_1 extends Plugin_1.default {
57
57
  configure(_pluginManager) { }
58
58
  }
59
59
  exports.default = default_1;
60
- //# sourceMappingURL=index.js.map
@@ -33,4 +33,3 @@ const UCSCTrackHubConnection = (0, configuration_1.ConfigurationSchema)('UCSCTra
33
33
  baseConfiguration: models_1.baseConnectionConfig,
34
34
  });
35
35
  exports.default = UCSCTrackHubConnection;
36
- //# sourceMappingURL=configSchema.js.map
@@ -16,4 +16,3 @@ exports.default = (pluginManager) => {
16
16
  url: '//genome.ucsc.edu/goldenPath/help/hgTrackHubHelp.html#Intro',
17
17
  }));
18
18
  };
19
- //# sourceMappingURL=index.js.map
@@ -114,4 +114,3 @@ function UCSCTrackHubConnection(pluginManager) {
114
114
  }));
115
115
  }
116
116
  exports.default = UCSCTrackHubConnection;
117
- //# sourceMappingURL=model.js.map
@@ -200,4 +200,3 @@ xenTro2
200
200
  xenTro3
201
201
  xenTro7
202
202
  xenTro9`.split(/\r?\n/);
203
- //# sourceMappingURL=ucscAssemblies.js.map
@@ -325,4 +325,3 @@ function makeTrackConfig(track, categories, trackDbLoc, trackDb, sequenceAdapter
325
325
  }
326
326
  var ucscAssemblies_1 = require("./ucscAssemblies");
327
327
  Object.defineProperty(exports, "ucscAssemblies", { enumerable: true, get: function () { return __importDefault(ucscAssemblies_1).default; } });
328
- //# sourceMappingURL=ucscTrackHub.js.map
@@ -56,4 +56,3 @@ export default observer(function AddConnectionWidget({ model, }) {
56
56
  }
57
57
  }, className: classes.button, "data-testid": "addConnectionNext" }, activeStep === steps.length - 1 ? 'Connect' : 'Next')))))))));
58
58
  });
59
- //# sourceMappingURL=AddConnectionWidget.js.map
@@ -7,4 +7,3 @@ export default observer(function ({ connectionType, model, session, }) {
7
7
  return (React.createElement(Suspense, { fallback: React.createElement(LoadingEllipses, null) },
8
8
  React.createElement(ConfigEditorComponent, { model: { target: model }, session: session })));
9
9
  });
10
- //# sourceMappingURL=ConfigureConnection.js.map
@@ -14,4 +14,3 @@ export default observer(function ConnectionTypeSelect({ connectionTypeChoices, c
14
14
  connectionType.url ? (React.createElement(IconButton, { href: connectionType.url, rel: "noopener noreferrer", target: "_blank" },
15
15
  React.createElement(OpenInNewIcon, null))) : null)) : null, select: true, fullWidth: true, onChange: event => setConnectionType(connectionTypeChoices.find(c => c.name === event.target.value)), variant: "outlined" }, connectionTypeChoices.map(c => (React.createElement(MenuItem, { key: c.name, value: c.name }, c.displayName || c.name))))) : null));
16
16
  });
17
- //# sourceMappingURL=ConnectionTypeSelect.js.map
@@ -14,4 +14,3 @@ export default (pluginManager) => {
14
14
  });
15
15
  });
16
16
  };
17
- //# sourceMappingURL=index.js.map
@@ -4,4 +4,3 @@ export default types.model('AddConnectionModel', {
4
4
  id: ElementId,
5
5
  type: types.literal('AddConnectionWidget'),
6
6
  });
7
- //# sourceMappingURL=model.js.map
@@ -24,4 +24,3 @@ function AddTrackSelector({ model }) {
24
24
  React.createElement(Component, { model: model })));
25
25
  }
26
26
  export default observer(AddTrackSelector);
27
- //# sourceMappingURL=AddTrackWidget.js.map
@@ -95,4 +95,3 @@ export default observer(function ConfirmTrack({ model, }) {
95
95
  } }) }))),
96
96
  isElectron && check && supportedForIndexing ? (React.createElement(TextIndexingConfig, { model: model })) : null));
97
97
  });
98
- //# sourceMappingURL=ConfirmTrack.js.map
@@ -127,4 +127,3 @@ function AddTrackWorkflow({ model }) {
127
127
  React.createElement(Alert, { severity: "error" }, trackErrorMessage))) : null)))))));
128
128
  }
129
129
  export default observer(AddTrackWorkflow);
130
- //# sourceMappingURL=DefaultAddTrackWorkflow.js.map
@@ -39,4 +39,3 @@ function AddTrackWorkflow({ model }) {
39
39
  } }, "Submit")));
40
40
  }
41
41
  export default observer(AddTrackWorkflow);
42
- //# sourceMappingURL=PasteConfigWorkflow.js.map
@@ -72,4 +72,3 @@ const TextIndexingConfig = observer(function ({ model, }) {
72
72
  } })))))))));
73
73
  });
74
74
  export default TextIndexingConfig;
75
- //# sourceMappingURL=TextIndexingConfig.js.map
@@ -42,4 +42,3 @@ const TrackAdapterSelector = observer(({ model }) => {
42
42
  })));
43
43
  });
44
44
  export default TrackAdapterSelector;
45
- //# sourceMappingURL=TrackAdapterSelector.js.map
@@ -21,4 +21,3 @@ function TrackSourceSelect({ model }) {
21
21
  React.createElement(FileSelector, { name: "Index file", description: "(Optional) The URL of the index file is automatically inferred from the URL of the main file if it is not supplied.", location: model.indexTrackData, setLocation: model.setIndexTrackData, setName: model.setTrackName, rootModel: rootModel })));
22
22
  }
23
23
  export default observer(TrackSourceSelect);
24
- //# sourceMappingURL=TrackSourceSelect.js.map
@@ -19,4 +19,3 @@ const TrackTypeSelector = observer(({ model }) => {
19
19
  } }, trackTypes.map(({ name, displayName }) => (React.createElement(MenuItem, { key: name, value: name }, displayName)))));
20
20
  });
21
21
  export default TrackTypeSelector;
22
- //# sourceMappingURL=TrackTypeSelector.js.map
@@ -14,4 +14,3 @@ export default (pluginManager) => {
14
14
  });
15
15
  });
16
16
  };
17
- //# sourceMappingURL=index.js.map
@@ -151,4 +151,3 @@ export default function f(pluginManager) {
151
151
  },
152
152
  }));
153
153
  }
154
- //# sourceMappingURL=model.js.map
@@ -102,4 +102,3 @@ const AssemblyAddForm = observer(function ({ rootModel, setFormOpen, }) {
102
102
  React.createElement(Button, { variant: "contained", color: "secondary", startIcon: React.createElement(AddIcon, null), onClick: createAssembly }, "Create new assembly")));
103
103
  });
104
104
  export default AssemblyAddForm;
105
- //# sourceMappingURL=AssemblyAddForm.js.map
@@ -6,4 +6,3 @@ const AssemblyEditor = observer(({ assembly, }) => {
6
6
  React.createElement(ConfigurationEditor, { model: { target: assembly } })));
7
7
  });
8
8
  export default AssemblyEditor;
9
- //# sourceMappingURL=AssemblyEditor.js.map
@@ -26,4 +26,3 @@ const AssemblyManager = observer(function ({ rootModel, onClose, }) {
26
26
  React.createElement(Button, { variant: "contained", startIcon: React.createElement(AddIcon, null), onClick: () => setFormOpen(true) }, "Add new assembly"))) : null)));
27
27
  });
28
28
  export default AssemblyManager;
29
- //# sourceMappingURL=AssemblyManager.js.map
@@ -36,4 +36,3 @@ const AssemblyTable = observer(function ({ rootModel, setIsAssemblyBeingEdited,
36
36
  })))));
37
37
  });
38
38
  export default AssemblyTable;
39
- //# sourceMappingURL=AssemblyTable.js.map
@@ -1,2 +1 @@
1
1
  export { default } from './AssemblyManager';
2
- //# sourceMappingURL=index.js.map
@@ -40,4 +40,3 @@ export default observer(function HierarchicalFab({ model, }) {
40
40
  }
41
41
  } }, "Add track")) : null))) : null));
42
42
  });
43
- //# sourceMappingURL=HierarchicalFab.js.map
@@ -24,4 +24,3 @@ const HierarchicalTrackSelector = observer(function ({ model, toolbarHeight = 0,
24
24
  React.createElement(AutoSizedHierarchicalTree, { tree: model.hierarchy, model: model, offset: toolbarHeight + headerHeight })));
25
25
  });
26
26
  export default HierarchicalTrackSelectorContainer;
27
- //# sourceMappingURL=HierarchicalTrackSelector.js.map
@@ -39,4 +39,3 @@ export default observer(function ShoppingCart({ model, }) {
39
39
  })),
40
40
  ] })));
41
41
  });
42
- //# sourceMappingURL=ShoppingCart.js.map
@@ -19,4 +19,3 @@ export default observer(function CloseConnectionDialog({ modalInfo = {}, onClose
19
19
  }
20
20
  : () => { }, color: "primary" }, "OK"))));
21
21
  });
22
- //# sourceMappingURL=CloseConnectionDialog.js.map
@@ -21,4 +21,3 @@ function DeleteConnectionDialog({ deleteDialogDetails, session, handleClose, })
21
21
  } }, "OK"))));
22
22
  }
23
23
  export default observer(DeleteConnectionDialog);
24
- //# sourceMappingURL=DeleteConnectionDialog.js.map
@@ -33,4 +33,3 @@ function ManageConnectionsDlg({ session, handleClose, breakConnection, }) {
33
33
  React.createElement(Button, { onClick: () => handleClose(), variant: "contained", color: "primary" }, "Close"))));
34
34
  }
35
35
  export default observer(ManageConnectionsDlg);
36
- //# sourceMappingURL=ManageConnectionsDialog.js.map
@@ -46,4 +46,3 @@ export default observer(function ToggleConnectionDialog({ session, handleClose,
46
46
  React.createElement(DialogActions, null,
47
47
  React.createElement(Button, { onClick: () => handleClose(), variant: "contained", color: "primary" }, "Close"))));
48
48
  });
49
- //# sourceMappingURL=ToggleConnectionsDialog.js.map
@@ -67,4 +67,3 @@ export default function FacetFilters({ rows, columns, dispatch, filters, width,
67
67
  }
68
68
  return (React.createElement("div", null, facets.map((column, index) => (React.createElement(FacetFilter, { key: column.field, vals: [...uniqs[index]], column: column, width: width, dispatch: dispatch, filters: filters })))));
69
69
  }
70
- //# sourceMappingURL=FacetFilters.js.map
@@ -10,4 +10,3 @@ function FacetedDlg(props) {
10
10
  React.createElement(FacetedSelector, { ...props }))));
11
11
  }
12
12
  export default observer(FacetedDlg);
13
- //# sourceMappingURL=FacetedDialog.js.map